>Y081_NPVAC (Q06694) Hypothetical 26.9 kDa protein in GP41-PNK intergenic|
           region
          Length = 233

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = +2

Query: 128 QPPPPSLAMNKVNLPTF--SITKKI*TP---SRITTENFT 232
           +PPPP L+M+K   PT   SI+KKI T     R+  +N T
Sbjct: 6   RPPPPPLSMSKKETPTLLDSISKKISTTETLQRLRNKNLT 45

>GSPE_PSEAE (Q00512) General secretion pathway protein E (Type II traffic|
           warden ATPase)
          Length = 502

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 386 PLKEHLEGAGVELVLALLDDDGRRSLRAVQQRDAD 490
           P++ HLEG G   V A +D    R LRA+ ++D D
Sbjct: 293 PIEYHLEGIGQTQVNAKVDMTFARGLRAILRQDPD 327

>COMD3_RAT (Q6P9U3) COMM domain-containing protein 3|
          Length = 195

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 484 ISLLHCSEASTAVVIEKGKHKLYSSSLKMLLE 389
           + L HC  A+   ++E GKH++  S+L   LE
Sbjct: 57  VVLKHCHGAAATYILEAGKHRVDKSTLSTYLE 88

>COMD3_MOUSE (Q63829) COMM domain-containing protein 3 (Bmi-1 upstream gene|
           protein) (Bup protein)
          Length = 195

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 484 ISLLHCSEASTAVVIEKGKHKLYSSSLKMLLE 389
           + L HC  A+   ++E GKH++  S+L   LE
Sbjct: 57  VVLKHCHAAAATCILEAGKHQVDKSTLSTYLE 88

>HXKG_ASPNG (Q92407) Glucokinase (EC 2.7.1.2) (Glucose kinase) (GLK)|
          Length = 495

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 204 QAESRLRILHNDNRSAYTLPRGEKGGRRGSSVMDGG 311
           Q ES LRI HND+  A+   R EK G     + D G
Sbjct: 116 QIESFLRIHHNDHFEAHLRRRNEKNGNCEEDLFDLG 151

>COMD3_HUMAN (Q9UBI1) COMM domain-containing protein 3 (Bup protein) (PIL|
           protein)
          Length = 195

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 484 ISLLHCSEASTAVVIEKGKHKLYSSSLKMLLE 389
           + L HC  A+   ++E GKH+   S+L   LE
Sbjct: 57  VVLKHCHAAAATYILEAGKHRADKSTLSTYLE 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,974,818
Number of Sequences: 219361
Number of extensions: 935597
Number of successful extensions: 2502
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2502
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)