ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags3h15 |
|---|---|
| Clone Library Name | barley_pub |
>GGABP_MOUSE (Q9D8L5) GGA-binding partner| Length = 442 Score = 37.7 bits (86), Expect = 0.030 Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 6/113 (5%) Frame = -3 Query: 608 EEAITQLIDANSKLLTKA--EEFTSADGLDGGSVDL----RSRSQRKILERVRKMSEKVG 447 E A+ +A ++TKA EE + + + +L +R Q ++ E ++ ++ Sbjct: 305 ESAVKLEKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQERVAEAIQAAVQEQQ 364 Query: 446 RLEMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSRR 288 R+ E K V EE+R S +A + +R+R +LVEY+ +RR D +R+ Sbjct: 365 RMSQEAVKAAIV----EEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQ 413
>GGABP_RAT (Q6AY97) GGA-binding partner| Length = 442 Score = 37.4 bits (85), Expect = 0.039 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 3/110 (2%) Frame = -3 Query: 608 EEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEMEM 429 E A+ +A ++TKA E + L+ + R + + +++E + E Sbjct: 305 ESAVKLEKEAMKDVITKAVE-EERENLEKVHAEEREMWKTEHARDQERVAEAIQAAVQEQ 363 Query: 428 QKFQQVLLKH---EEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSRR 288 Q+ Q +K EE+R S +A + +R+R +LVEY+ +RR D +R+ Sbjct: 364 QRMSQEAVKAAIAEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQ 413
>BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B (Extracellular| matrix protein F22) Length = 2130 Score = 34.7 bits (78), Expect = 0.25 Identities = 28/109 (25%), Positives = 50/109 (45%) Frame = -3 Query: 617 IESEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLE 438 +E E Q+++A K K EE +A K+LE +++ EK Sbjct: 869 MEKELRAQQILEAKKK---KKEEAANA----------------KLLEAEKRIKEK----- 904 Query: 437 MEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSR 291 EM++ Q VLLKH+E R + +RR + L++ + +++ + R Sbjct: 905 -EMRRQQAVLLKHQELERHRLDMERERRRQHMMLMKAMEARKKAEEKER 952
>SMC1A_MOUSE (Q9CU62) Structural maintenance of chromosome 1-like 1 protein| (SMC1alpha protein) (Chromosome segregation protein SmcB) (Sb1.8) Length = 1233 Score = 34.7 bits (78), Expect = 0.25 Identities = 20/66 (30%), Positives = 36/66 (54%) Frame = -3 Query: 548 FTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAA 369 F + + GG+ DL+++++R + V K+ EK GRL E+++ + K E R + A Sbjct: 646 FQKSGVISGGASDLKAKARRWDEKAVDKLKEKKGRLTEELKEQMKAKRKEAELRQVQSQA 705 Query: 368 KTVQRR 351 +Q R Sbjct: 706 HGLQMR 711
>TRHY_HUMAN (Q07283) Trichohyalin| Length = 1898 Score = 34.3 bits (77), Expect = 0.33 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Frame = -3 Query: 614 ESEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEM 435 E EE + Q + + +L + EE L R + K LE+ R+ RL+ Sbjct: 542 EEEERLQQRLRSEQQLRREQEERLE---------QLLKREEEKRLEQERREQ----RLKR 588 Query: 434 EMQKFQQVLLKHEEERASRRAAKTVQRRSRVQL----VEYLYGKRRGDSGSRR 288 E ++ + LLK EEER +R + + R +L VE L + R D +R Sbjct: 589 EQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERRDERLKR 641
>GAG_BAEVM (P03341) Gag polyprotein [Contains: Inner coat protein p12; Core| protein p15; Core shell protein p30; Nucleoprotein p10] Length = 536 Score = 33.9 bits (76), Expect = 0.43 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 8/101 (7%) Frame = -3 Query: 530 LDGGSVDLRSRSQRKI------LERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAA 369 +D ++D++ + QR L+ + + +EKV ++ + L+K +EER RR Sbjct: 407 IDQAALDIKGKLQRLDGIQTHGLQELVREAEKVYNKRETPEEREARLIKEQEEREDRRDR 466 Query: 368 KTVQRRSRVQLVEYLYGKRRGDSGS--RRPKRGPSCCMRAK 252 K + +++ L + KR G SG RRPK C K Sbjct: 467 KRDKHLTKI-LAAVVTEKRAGKSGETRRRPKVDKDQCAYCK 506
>GGABP_HUMAN (Q7Z6B0) GGA-binding partner (p56 accessory protein)| Length = 441 Score = 33.9 bits (76), Expect = 0.43 Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 3/63 (4%) Frame = -3 Query: 467 KMSEKVGRLEMEMQKFQQVLLKH---EEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSG 297 K+S+++ + E +K Q +K EE++ S +A + +R+R +L+EY+ ++R D Sbjct: 350 KVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYIKEQKRLDQV 409 Query: 296 SRR 288 R+ Sbjct: 410 IRQ 412
>GGABP_PONPY (Q5RCA7) GGA-binding partner| Length = 405 Score = 33.9 bits (76), Expect = 0.43 Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 3/63 (4%) Frame = -3 Query: 467 KMSEKVGRLEMEMQKFQQVLLKH---EEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSG 297 K+S+++ + E +K Q +K EE++ S +A + +R+R +L+EY+ ++R D Sbjct: 314 KVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYIKEQKRLDQV 373 Query: 296 SRR 288 R+ Sbjct: 374 IRQ 376
>SH2P1_MOUSE (Q62018) SH2 domain-binding protein 1 (Tetratricopeptide| repeat-containing, SH2-binding phosphoprotein of 150 kDa) (TPR-containing, SH2-binding phosphoprotein of 150 kDa) (p150TSP) Length = 1173 Score = 33.1 bits (74), Expect = 0.73 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 18/97 (18%) Frame = -3 Query: 512 DLRSRSQRKILERVRKMSEKVGRL----EMEMQKFQQVLLKHEEERASR----------R 375 DL S++Q + R RK E+ L E E + +Q LLK +EE+ R + Sbjct: 819 DLLSQAQYHVA-RARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQ 877 Query: 374 AAKTVQRRSRVQL----VEYLYGKRRGDSGSRRPKRG 276 A+ V++ + + E K+RG G RR K+G Sbjct: 878 RAQYVEKTKNILMFTGETEATKEKKRGGGGGRRSKKG 914
>SH2P1_HUMAN (Q6PD62) SH2 domain-binding protein 1| Length = 1173 Score = 33.1 bits (74), Expect = 0.73 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 18/97 (18%) Frame = -3 Query: 512 DLRSRSQRKILERVRKMSEKVGRL----EMEMQKFQQVLLKHEEERASR----------R 375 DL S++Q + R RK E+ L E E + +Q LLK +EE+ R + Sbjct: 819 DLLSQAQYHVA-RARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQ 877 Query: 374 AAKTVQRRSRVQL----VEYLYGKRRGDSGSRRPKRG 276 A+ V++ + + E K+RG G RR K+G Sbjct: 878 RAQYVEKTKNILMFTGETEATKEKKRGGGGGRRSKKG 914
>MYSN_DROME (Q99323) Myosin heavy chain, non-muscle (Zipper protein) (Myosin II)| (Non-muscle MHC) Length = 2057 Score = 33.1 bits (74), Expect = 0.73 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 14/111 (12%) Frame = -3 Query: 620 MIESEEAITQLIDANSK---LLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKV 450 + E EE L +K +T+ EE D D RS+RKI V + E++ Sbjct: 1099 LAEEEEKAKHLAKLKAKHEATITELEERLHKDQQQRQESD---RSKRKIETEVADLKEQL 1155 Query: 449 GRLEMEMQKFQ-----------QVLLKHEEERASRRAAKTVQRRSRVQLVE 330 +++ + Q Q LL+ +EE A++ A+ QR QL E Sbjct: 1156 NERRVQVDEMQAQLAKREEELTQTLLRIDEESATKATAQKAQRELESQLAE 1206
>SIRT7_HUMAN (Q9NRC8) NAD-dependent deacetylase sirtuin-7 (EC 3.5.1.-)| (SIR2-like protein 7) Length = 400 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = -3 Query: 503 SRSQRKILERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEYL 324 SRS+RK ERVR++ E E + ++ +QV + A R A + LV L Sbjct: 7 SRSERKAAERVRRLRE-----EQQRERLRQVSRILRKAAAERSAEEGRLLAESADLVTEL 61 Query: 323 YGKRRGDSGSRR 288 G+ R G +R Sbjct: 62 QGRSRRREGLKR 73
>EEA1_MOUSE (Q8BL66) Early endosome antigen 1| Length = 1411 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Frame = -3 Query: 614 ESEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRK--------MS 459 ES + IT L DA L+ + E +++ SQ+ + E+V+K S Sbjct: 1153 ESIKEITNLKDAKQLLIQQKLELQGRVDSLKAALEQEKESQQLMREQVKKEEEKRKEEFS 1212 Query: 458 EKVGRLEMEMQKFQQVLLKHEEERA 384 EK +L E+++ + + KHEE A Sbjct: 1213 EKEAKLHSEIKEKEAGMKKHEENEA 1237
>PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated protein (PUMA1)| Length = 1955 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/97 (24%), Positives = 47/97 (48%) Frame = -3 Query: 620 MIESEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRL 441 +I + +T+L N KL + + S+ VDL + E++RK+ ++ +L Sbjct: 706 IISVQTEVTKLTTLNDKLQKEKQSIMSSKQKADTDVDL-------LKEKLRKLEQECDKL 758 Query: 440 EMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVE 330 + E + HE+E+ +R+ K + SR+ L+E Sbjct: 759 KEENKAL------HEDEQIARQMCK--EEASRIHLLE 787
>BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain 2B (hWALp4)| Length = 1972 Score = 31.6 bits (70), Expect = 2.1 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%) Frame = -3 Query: 617 IESEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLE 438 +E E Q+++A K K EE +A K+LE +++ EK Sbjct: 759 MEKELRAQQILEAKKK---KKEEAANA----------------KLLEAEKRIKEK----- 794 Query: 437 MEMQKFQQVLLKHEEERASRR---AAKTVQRRSRVQLVEYLYGKRRGDSGSRRPKR 279 EM++ Q VLLKH+E R+ K ++ R + + E L ++R + + ++ Sbjct: 795 -EMRRQQAVLLKHQERERRRQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERK 849
>SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arginine-rich 54| kDa nuclear protein) (p54) Length = 484 Score = 31.6 bits (70), Expect = 2.1 Identities = 21/76 (27%), Positives = 34/76 (44%) Frame = -3 Query: 506 RSRSQRKILERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEY 327 RSR + K R R S + GR K + + +E++ S+ K+ R + Sbjct: 282 RSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASR 341 Query: 326 LYGKRRGDSGSRRPKR 279 +RR SG+R PK+ Sbjct: 342 ERRRRRSRSGTRSPKK 357
>SMC1A_XENLA (O93308) Structural maintenance of chromosome 1 protein (xSMC1)| Length = 1232 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = -3 Query: 548 FTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAA 369 F + + GG+ DL+++++R + V K+ EK RL E+++ + K E R + A Sbjct: 646 FQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQA 705 Query: 368 KTVQRR 351 +Q R Sbjct: 706 HGLQMR 711
>SMC1A_RAT (Q9Z1M9) Structural maintenance of chromosome 1-like 1 protein| (SMC-protein) Length = 1233 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = -3 Query: 548 FTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAA 369 F + + GG+ DL+++++R + V K+ EK RL E+++ + K E R + A Sbjct: 646 FQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQA 705 Query: 368 KTVQRR 351 +Q R Sbjct: 706 HGLQMR 711
>SMC1A_HUMAN (Q14683) Structural maintenance of chromosome 1-like 1 protein| (SMC1alpha protein) (DXS423E protein) (Sb1.8) Length = 1233 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = -3 Query: 548 FTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAA 369 F + + GG+ DL+++++R + V K+ EK RL E+++ + K E R + A Sbjct: 646 FQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQA 705 Query: 368 KTVQRR 351 +Q R Sbjct: 706 HGLQMR 711
>SMC1A_BOVIN (O97593) Structural maintenance of chromosome 1-like 1 protein| (SMC-protein) Length = 1233 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = -3 Query: 548 FTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAA 369 F + + GG+ DL+++++R + V K+ EK RL E+++ + K E R + A Sbjct: 646 FQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQA 705 Query: 368 KTVQRR 351 +Q R Sbjct: 706 HGLQMR 711
>RACA_BACLD (Q65DU9) Chromosome-anchoring protein racA| Length = 186 Score = 31.2 bits (69), Expect = 2.8 Identities = 28/123 (22%), Positives = 58/123 (47%) Frame = -3 Query: 623 QMIESEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGR 444 +MI+++E QL N +L + + F + L+ R Q+KI E RK+ +K Sbjct: 77 EMIQTKEPALQL---NERLEERLQRFLEHEQLE------RELLQKKIAELERKLEQKAD- 126 Query: 443 LEMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSRRPKRGPSCC 264 E+ +Q + + E E ++ Q+ S+++ + +R D+ RR ++ P Sbjct: 127 ---EVVSYQLLQQRRELEEERQQIKHLEQKISQLESM----NRREKDTAVRREEKKPKSK 179 Query: 263 MRA 255 +++ Sbjct: 180 LKS 182
>ENT1_SCHPO (O74423) Epsin-1| Length = 706 Score = 31.2 bits (69), Expect = 2.8 Identities = 29/105 (27%), Positives = 43/105 (40%) Frame = -3 Query: 584 DANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEMEMQKFQQVLL 405 D + TKA+E TS + + R S+ + +R R S + + + +++ L Sbjct: 120 DQGQNVRTKAKEITSLLEDEHALKEARGDSRERDRDRDRTRSSRFDDDDDDRAPYEESRL 179 Query: 404 KHEEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSRRPKRGPS 270 RASR RSR +R G S SRR R PS Sbjct: 180 SRAPSRASRYDDDDRDHRSR----RRSRSRRPGRSRSRRRSRRPS 220
>SIRT7_MOUSE (Q8BKJ9) NAD-dependent deacetylase sirtuin-7 (EC 3.5.1.-)| (SIR2-like protein 7) Length = 402 Score = 31.2 bits (69), Expect = 2.8 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = -3 Query: 503 SRSQRKILERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEYL 324 SRS+RK ERVR++ E E + ++ +QV + A R A + LV L Sbjct: 8 SRSERKAAERVRRLRE-----EQQRERLRQVSRILRKAAAERSAEEGRLLAESEDLVTEL 62 Query: 323 YGKRRGDSGSRR 288 G+ R G +R Sbjct: 63 QGRSRRREGLKR 74
>GOGA5_MOUSE (Q9QYE6) Golgin subfamily A member 5 (Golgin-84) (Sumiko protein)| (Ret-II protein) Length = 729 Score = 31.2 bits (69), Expect = 2.8 Identities = 18/83 (21%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Frame = -3 Query: 650 RASWRA*GAQMIESEEAITQLIDANSKLLTKAEEFTSADGLD---GGSVDLRSRSQRKIL 480 RAS + ++++ ++ T+++ + KL+ +E +S +GL+ S++L K + Sbjct: 416 RASLESAKQELVDYKQKATRILQSKEKLINSLKEGSSFEGLESSTASSMELEELRHEKEM 475 Query: 479 --ERVRKMSEKVGRLEMEMQKFQ 417 E ++K+ ++ +L E+Q + Sbjct: 476 QKEEIQKLMGQMHQLRSELQDME 498
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 30.4 bits (67), Expect = 4.8 Identities = 28/108 (25%), Positives = 50/108 (46%) Frame = -3 Query: 614 ESEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEM 435 + E+ + DA KL ++ E D +L + + E +R+M E + Sbjct: 504 QREQVEKNMKDAKDKLESEME-----DAYHEHQANLLRQDLMRRQEELRRMEELHNQ--- 555 Query: 434 EMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSR 291 EMQK +++ L+ EEER R +++R +E ++R +S SR Sbjct: 556 EMQKRKEMQLRQEEERRRREEEMMIRQRE----MEEQMRRQREESYSR 599
>YPDD_CAEEL (Q11191) Hypothetical protein C05D11.13| Length = 270 Score = 30.4 bits (67), Expect = 4.8 Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Frame = -3 Query: 611 SEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEME 432 SEE T+L A + E T + + L+ +++RK +ER+++ ++ ++ Sbjct: 87 SEETHTRLAKAADYKRKRCSEETEEEYRER----LKRQAERKKMERMQESEDQANNRRIK 142 Query: 431 MQKFQQVLLKHEE-ERASRRAAKTVQRRSRVQLVE 330 + ++ L+ E E+A R K +RR + L E Sbjct: 143 AAEHRRQYLQRESFEKAQERRNKDAERRRKSLLAE 177
>YNP9_CAEEL (P34562) Hypothetical GRIP and coiled-coil domain-containing| protein T05G5.9 in chromosome III Length = 660 Score = 30.4 bits (67), Expect = 4.8 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 14/92 (15%) Frame = -3 Query: 608 EEAITQLIDANSKLLTKAEEFTS-ADGLDGGSVDLRSRSQ-------------RKILERV 471 EEA+ L N KLL K EEF++ + + + +S RK +E++ Sbjct: 243 EEAVDVLKSENEKLLAKNEEFSAKLVSSEKEFAEFKKKSHFVLEKKGKQEDETRKAIEKL 302 Query: 470 RKMSEKVGRLEMEMQKFQQVLLKHEEERASRR 375 K + LE + + +Q K E+ AS R Sbjct: 303 EKSKVTITELEQQADQTRQEHFKTVEDLASSR 334
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 30.4 bits (67), Expect = 4.8 Identities = 28/108 (25%), Positives = 50/108 (46%) Frame = -3 Query: 614 ESEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGRLEM 435 + E+ + DA KL ++ E D +L + + E +R+M E + Sbjct: 496 QREQVEKNMKDAKDKLESEME-----DAYHEHQANLLRQDLMRRQEELRRMEELHSQ--- 547 Query: 434 EMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSR 291 EMQK +++ L+ EEER R +++R +E ++R +S SR Sbjct: 548 EMQKRKEMQLRQEEERRRREEEMMIRQRE----MEEQMRRQREESYSR 591
>TRHY_RABIT (P37709) Trichohyalin| Length = 1407 Score = 30.0 bits (66), Expect = 6.2 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%) Frame = -3 Query: 623 QMIESEEAITQLIDANSKLLTKAEEFTSADGLDGGSVDLRSRSQRKILERVRKMSEKVGR 444 Q +E EE Q + +L +E L ++R R QR E R+ R Sbjct: 271 QRLEQEERREQQLRREQRL---EQEERREQQLRRELEEIREREQRLEQEERREQ-----R 322 Query: 443 LEMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEYL-YGKRRGDSGSRRPKR 279 LE E ++ QQ+ + EE R + + +RR ++ E + RG+S +RR +R Sbjct: 323 LEQEERREQQLKRELEEIREREQRLEQEERREQLLAEEVREQARERGESLTRRWQR 378
>Y206_ENCCU (Q8SWH6) Hypothetical protein ECU02_0060| Length = 602 Score = 30.0 bits (66), Expect = 6.2 Identities = 20/70 (28%), Positives = 30/70 (42%) Frame = -3 Query: 461 SEKVGRLEMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSRRPK 282 SE V R+ +++ + E+ER A R +++ E GK +G G R K Sbjct: 299 SESVNRVVCSIRE------REEDERKRAEAESARNREELLRMEEREKGKEKGSKGKGRKK 352 Query: 281 RGPSCCMRAK 252 RG AK Sbjct: 353 RGKKGAGEAK 362
>PDCD7_MOUSE (Q9WTY1) Programmed cell death protein 7 (ES18)| Length = 482 Score = 30.0 bits (66), Expect = 6.2 Identities = 15/50 (30%), Positives = 30/50 (60%) Frame = -3 Query: 482 LERVRKMSEKVGRLEMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQLV 333 L+R+RK+ +K L ++ +V+L+ E+E RR + QR+ + +L+ Sbjct: 349 LQRLRKLIKKRSELYEAEERALRVMLEGEQEEERRRELEKKQRKEKEKLL 398
>MOES_PIG (P26042) Moesin (Membrane-organizing extension spike protein)| Length = 576 Score = 29.6 bits (65), Expect = 8.1 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Frame = -3 Query: 500 RSQRKILERVRKMSE--KVGRLEMEMQKFQQVLLKHEEERASRRAAKTVQRRSRVQ 339 R + +++ER++++ E K + E+E Q + + L+ E +RA A K + R + Sbjct: 341 REKEELMERLKQIEEQTKKAQQELEEQTRRALALEQERKRAQSEAEKLAKERQEAE 396 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,617,384 Number of Sequences: 219361 Number of extensions: 708066 Number of successful extensions: 2755 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2651 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2746 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
