Clone Information

BLAST Search Result

Clone Name	rbags3g23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|Z34267.1\|HVBKACPS2 H.vulgare (pMaW20) pseudo mRNA for beta-k...	1090	0.0
2	emb\|Z34268.1\|HVBKACPS3 H.vulgare (pMaW22) mRNA for beta-ketoacyl...	640	e-180
3	ref\|XM_479165.1\| Oryza sativa (japonica cultivar-group), mRNA	301	1e-78
4	dbj\|AK067275.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	301	1e-78
5	gb\|BT018837.1\| Zea mays clone EL01N0552G07.d mRNA sequence	220	4e-54
6	gb\|AY103998.1\| Zea mays PCO121523 mRNA sequence	220	4e-54
7	gb\|AY106155.1\| Zea mays PCO093981 mRNA sequence	149	1e-32
8	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
9	dbj\|AP004988.3\| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
10	emb\|Z34269.1\|HVBKACPS4 H.vulgare (pMaW25) mRNA for beta-ketoacyl...	88	4e-14
11	gb\|U67316.1\|CWU67316 Cuphea wrightii beta-ketoacyl-ACP synthase ...	48	0.031
12	gb\|AY845865.1\| Betula pendula plastid beta-ketoacyl ACP synthase...	46	0.12
13	gb\|CP000095.1\| Prochlorococcus marinus str. NATL2A, complete genome	46	0.12
14	gb\|AF026149.1\|AF026149 Perilla frutescens beta-ketoacyl-ACP synt...	46	0.12
15	emb\|AJ344250.1\|CLA344250 Cuphea lanceolata mRNA for beta-ketoacy...	44	0.48
16	dbj\|AP007166.1\| Aspergillus oryzae RIB40 genomic DNA, SC113	44	0.48
17	gb\|U67317.1\|CWU67317 Cuphea wrightii beta-ketoacyl-ACP synthase ...	44	0.48
18	dbj\|AP004472.1\| Lotus japonicus genomic DNA, chromosome 4, clone...	44	0.48
19	gb\|AY815931.1\| Schistosoma japonicum SJCHGC02809 protein mRNA, c...	42	1.9
20	gb\|AF263992.1\|AF263992 Coriandrum sativum beta-ketoacyl-ACP synt...	42	1.9
21	gb\|AC123644.8\| Mus musculus chromosome 15, clone RP23-85G7, comp...	42	1.9
22	gb\|AC137950.16\| Mus musculus chromosome 15, clone RP24-356L7, co...	42	1.9
23	emb\|AL117190.6\|CNS01DRF Human chromosome 14 DNA sequence BAC R-1...	42	1.9
24	dbj\|AP002986.2\| Homo sapiens genomic DNA, chromosome 11q, clone:...	42	1.9
25	gb\|AC011070.8\| Drosophila melanogaster clone BACR02B12, complete...	40	7.6
26	gb\|BT014362.1\| Lycopersicon esculentum clone 133648F, mRNA sequence	40	7.6
27	gb\|AC146651.10\| Medicago truncatula clone mth2-113d3, complete s...	40	7.6
28	emb\|AL512623.5\| Human DNA sequence from clone RP11-501G7 on chro...	40	7.6
29	dbj\|AP008229.1\| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c...	40	7.6
30	gb\|AE012078.1\| Xanthomonas axonopodis pv. citri str. 306, secti...	40	7.6
31	gb\|CP000254.1\| Methanospirillum hungatei JF-1, complete genome	40	7.6
32	emb\|CR318586.3\| Zebrafish DNA sequence from clone CH211-239O22 i...	40	7.6
33	gb\|AC010706.8\|AC010706 Drosophila melanogaster, chromosome X, re...	40	7.6
34	ref\|XM_395618.2\| PREDICTED: Apis mellifera similar to GA11189-PA...	40	7.6
35	gb\|AF331922.1\|AF331922 Xanthomonas oryzae pv. oryzae putative si...	40	7.6
36	gb\|AC096570.1\| Homo sapiens BAC clone RP11-368O18 from 2, comple...	40	7.6
37	gb\|AC134903.4\| Mus musculus BAC clone RP23-329A21 from chromosom...	40	7.6
38	dbj\|BA000045.2\| Gloeobacter violaceus PCC 7421 DNA, complete genome	40	7.6
39	dbj\|AP006465.4\| Oryza sativa (japonica cultivar-group) genomic D...	40	7.6
40	dbj\|AP006447.4\| Oryza sativa (japonica cultivar-group) genomic D...	40	7.6
41	gb\|AC115853.8\| Mus musculus chromosome 5, clone RP24-273B9, comp...	40	7.6
42	emb\|AL732455.6\| Zebrafish DNA sequence from clone CH211-225J17 i...	40	7.6
43	emb\|BX005071.4\| Zebrafish DNA sequence from clone CH211-139O14 i...	40	7.6
44	emb\|CT476810.5\| Zebrafish DNA sequence from clone ZFOS-260D6 in ...	40	7.6
45	gb\|AE003499.5\| Drosophila melanogaster chromosome X, section 51 ...	40	7.6
46	gb\|AE013598.1\| Xanthomonas oryzae pv. oryzae KACC10331, complete...	40	7.6

>emb|Z34267.1|HVBKACPS2 H.vulgare (pMaW20) pseudo mRNA for beta-ketoacyl-ACP synthase
            (partial)
          Length = 1734

 Score = 1090 bits (550), Expect = 0.0
 Identities = 557/558 (99%), Gaps = 1/558 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tgaataacaataaacataggccataggctacaccacatgattcttcgcttgcgaaaggaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1486 tgaataacaataaacataggccataggctacaccacatgattcttcgcttgcgaaaggaa 1427

                                                                        
Query: 61   tactggacccttgacaggggatgtgcctgcgatgcgatggcgacaaatatgaacatggct 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1426 tactggacccttgacaggggatgtgcctgcgatgcgatggcgacaaatatgaacatggct 1367

                                                                        
Query: 121  gggggcttgtgaggcctcgacgctttcttagctcgaatgtaagtaatacgatgatcttct 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1366 gggggcttgtgaggcctcgacgctttcttagctcgaatgtaagtaatacgatgatcttct 1307

                                                                        
Query: 181  cagctcagacctccatgtaatattcaaagaagccgcctagctactccactagtcttgtat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 cagctcagacctccatgtaatattcaaagaagccgcctagctactccactagtcttgtat 1247

                                                                        
Query: 241  atgcagttccagttccattccataatcgcacgacaatgaagtaaacagatcaccgtcttg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 atgcagttccagttccattccataatcgcacgacaatgaagtaaacagatcaccgtcttg 1187

                                                                        
Query: 301  agttttacttgaagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 agttttacttgaagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagt 1127

                                                                        
Query: 361  ttgacagcgccacctttacttcgcatctctccttctctgatcccaccaacacgcccacgt 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 ttgacagcgccacctttacttcgcatctctccttctctgatcccaccaacacgcccacgt 1067

                                                                        
Query: 421  ccactactttttctgggttctccaaattcagatttggatggacccaaccagttcttatag 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 ccactactttttctgggttctccaaattcagatttggatggacccaaccagttcttatag 1007

                                                                        
Query: 481  cttgtacacaagcaacagcttctattccaccagctgctcctataagatgcccagtcattg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 cttgtacacaagcaacagcttctattccaccagctgctcctataagatgcccagtcattg 947

                              
Query: 541  attttggttgagttcacc 558
            ||||| ||||||||||||
Sbjct: 946  atttt-gttgagttcacc 930

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>emb|Z34268.1|HVBKACPS3 H.vulgare (pMaW22) mRNA for beta-ketoacyl-ACP synthase
          Length = 1606

 Score =  640 bits (323), Expect = e-180
 Identities = 330/331 (99%), Gaps = 1/331 (0%)
 Strand = Plus / Minus

                                                                        
Query: 228  actagtcttgtatatgcagttccagttccattccataatcgcacgacaatgaagtaaaca 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606 actagtcttgtatatgcagttccagttccattccataatcgcacgacaatgaagtaaaca 1547

                                                                        
Query: 288  gatcaccgtcttgagttttacttgaagggggcaaacagaattgatgagttatgcccacca 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1546 gatcaccgtcttgagttttacttgaagggggcaaacagaattgatgagttatgcccacca 1487

                                                                        
Query: 348  aatccaaatgagtttgacagcgccacctttacttcgcatctctccttctctgatcccacc 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1486 aatccaaatgagtttgacagcgccacctttacttcgcatctctccttctctgatcccacc 1427

                                                                        
Query: 408  aacacgcccacgtccactactttttctgggttctccaaattcagatttggatggacccaa 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1426 aacacgcccacgtccactactttttctgggttctccaaattcagatttggatggacccaa 1367

                                                                        
Query: 468  ccagttcttatagcttgtacacaagcaacagcttctattccaccagctgctcctataaga 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1366 ccagttcttatagcttgtacacaagcaacagcttctattccaccagctgctcctataaga 1307

                                           
Query: 528  tgcccagtcattgattttggttgagttcacc 558
            |||||||||||||||||| ||||||||||||
Sbjct: 1306 tgcccagtcattgatttt-gttgagttcacc 1277

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>ref|XM_479165.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2360

 Score =  301 bits (152), Expect = 1e-78
 Identities = 228/252 (90%), Gaps = 1/252 (0%)
 Strand = Plus / Minus

                                                                        
Query: 307  acttgaagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagtttgaca 366
            |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1832 acttgaagggtgcaaacagaattgatgagttgtgcccaccaaatccaaatgagtttgaca 1773

                                                                        
Query: 367  gcgccacctttacttcgcatctctccttctctgatcccaccaacacgcccacgtccacta 426
            | ||||| || |||| ||||||||||||||  || || |||| ||||||||| |||||||
Sbjct: 1772 gtgccacattcactttgcatctctccttctgcgacccgaccagcacgcccacatccacta 1713

                                                                        
Query: 427  ctttttctgggttctccaaattcagatttggatggacccaaccagttcttatagcttgta 486
             ||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 1712 ttttctctgggttctccaaattcagattcggatggacccagccagttcttatagcttgaa 1653

                                                                        
Query: 487  cacaagcaacagcttctattccaccagctgctcctataagatgcccagtcattgattttg 546
             |  ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| 
Sbjct: 1652 tagcagcaacagcttctattccaccagctgcacctattagatgtccagtcattgatttt- 1594

                        
Query: 547  gttgagttcacc 558
            ||||||||||||
Sbjct: 1593 gttgagttcacc 1582



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   aacataggccataggctaca 32
            ||||||||||||||||||||
Sbjct: 2154 aacataggccataggctaca 2135

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>dbj|AK067275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L18, full
            insert sequence
          Length = 2360

 Score =  301 bits (152), Expect = 1e-78
 Identities = 228/252 (90%), Gaps = 1/252 (0%)
 Strand = Plus / Minus

                                                                        
Query: 307  acttgaagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagtttgaca 366
            |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1832 acttgaagggtgcaaacagaattgatgagttgtgcccaccaaatccaaatgagtttgaca 1773

                                                                        
Query: 367  gcgccacctttacttcgcatctctccttctctgatcccaccaacacgcccacgtccacta 426
            | ||||| || |||| ||||||||||||||  || || |||| ||||||||| |||||||
Sbjct: 1772 gtgccacattcactttgcatctctccttctgcgacccgaccagcacgcccacatccacta 1713

                                                                        
Query: 427  ctttttctgggttctccaaattcagatttggatggacccaaccagttcttatagcttgta 486
             ||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 1712 ttttctctgggttctccaaattcagattcggatggacccagccagttcttatagcttgaa 1653

                                                                        
Query: 487  cacaagcaacagcttctattccaccagctgctcctataagatgcccagtcattgattttg 546
             |  ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| 
Sbjct: 1652 tagcagcaacagcttctattccaccagctgcacctattagatgtccagtcattgatttt- 1594

                        
Query: 547  gttgagttcacc 558
            ||||||||||||
Sbjct: 1593 gttgagttcacc 1582



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   aacataggccataggctaca 32
            ||||||||||||||||||||
Sbjct: 2154 aacataggccataggctaca 2135

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>gb|BT018837.1| Zea mays clone EL01N0552G07.d mRNA sequence
          Length = 1930

 Score =  220 bits (111), Expect = 4e-54
 Identities = 214/247 (86%), Gaps = 1/247 (0%)
 Strand = Plus / Minus

                                                                        
Query: 312  aagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagtttgacagcgcc 371
            ||||||||||| |||||||||||||| |||||||| || || |||||||| || | ||||
Sbjct: 1483 aagggggcaaagagaattgatgagttgtgcccaccgaagccgaatgagttggataacgcc 1424

                                                                        
Query: 372  acctttacttcgcatctctccttctctgatcccaccaacacgcccacgtccactactttt 431
            ||||| || || ||||||||||||| |||||| ||||| | |||||| |||||    |  
Sbjct: 1423 accttcacctcacatctctccttctgtgatcctaccaagatgcccacatccacagtgtcc 1364

                                                                        
Query: 432  tctgggttctccaaattcagatttggatggacccaaccagttcttatagcttgtacacaa 491
            || || || || ||||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 1363 tcaggattttctaaattcaaatttggatggacccaaccagttcttatagcttgtatagaa 1304

                                                                        
Query: 492  gcaacagcttctattccaccagctgctcctataagatgcccagtcattgattttggttga 551
            ||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||| ||
Sbjct: 1303 gcaactgcttctattccaccagctgctcatataagatgcccagtcattga-tttggtcga 1245

                   
Query: 552  gttcacc 558
            |||||||
Sbjct: 1244 gttcacc 1238

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>gb|AY103998.1| Zea mays PCO121523 mRNA sequence
          Length = 2316

 Score =  220 bits (111), Expect = 4e-54
 Identities = 214/247 (86%), Gaps = 1/247 (0%)
 Strand = Plus / Minus

                                                                        
Query: 312  aagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagtttgacagcgcc 371
            ||||||||||| |||||||||||||| |||||||| || || |||||||| || | ||||
Sbjct: 1844 aagggggcaaagagaattgatgagttgtgcccaccgaagccgaatgagttggataacgcc 1785

                                                                        
Query: 372  acctttacttcgcatctctccttctctgatcccaccaacacgcccacgtccactactttt 431
            ||||| || || ||||||||||||| ||| || ||||| | |||||| |||||    |  
Sbjct: 1784 accttcacctcacatctctccttctgtgaccctaccaagatgcccacatccacagtgtcc 1725

                                                                        
Query: 432  tctgggttctccaaattcagatttggatggacccaaccagttcttatagcttgtacacaa 491
            || || || || ||||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 1724 tcaggattttctaaattcaaatttggatggacccaaccagttcttatagcttgtatagaa 1665

                                                                        
Query: 492  gcaacagcttctattccaccagctgctcctataagatgcccagtcattgattttggttga 551
            ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 1664 gcaactgcttctattccaccagctgctcctataagatgcccagtcattga-tttggtcga 1606

                   
Query: 552  gttcacc 558
            |||||||
Sbjct: 1605 gttcacc 1599

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>gb|AY106155.1| Zea mays PCO093981 mRNA sequence
          Length = 2143

 Score =  149 bits (75), Expect = 1e-32
 Identities = 208/251 (82%), Gaps = 1/251 (0%)
 Strand = Plus / Minus

                                                                        
Query: 307  acttgaagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagtttgaca 366
            ||||||| || ||||||| ||| |||||||| ||||| ||||||||||| ||||| ||||
Sbjct: 1866 acttgaatggtgcaaacaaaatcgatgagttgtgcccgccaaatccaaacgagttcgaca 1807

                                                                        
Query: 367  gcgccacctttacttcgcatctctccttctctgatcccaccaacacgcccacgtccacta 426
            |||||||||| || || |||||||||||||  |  ||||||| ||  |  || |||||  
Sbjct: 1806 gcgccaccttcacatcacatctctccttctgcgggcccaccagcatcctgacatccacgg 1747

                                                                        
Query: 427  ctttttctgggttctccaaattcagatttggatggacccaaccagttcttatagcttgta 486
             ||| ||||| || |||||||| ||||||||||| |||||||| || |||||||||||||
Sbjct: 1746 ttttctctggattgtccaaattgagatttggatgcacccaacctgtccttatagcttgta 1687

                                                                        
Query: 487  cacaagcaacagcttctattccaccagctgctcctataagatgcccagtcattgattttg 546
             |  ||||||||| |||||||||||||| |||||||  ||||| || ||||| || ||| 
Sbjct: 1686 tagcagcaacagcctctattccaccagcagctcctagcagatggcctgtcatcgacttt- 1628

                       
Query: 547  gttgagttcac 557
            |||||||||||
Sbjct: 1627 gttgagttcac 1617

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Plus

                                                                            
Query: 307      acttgaagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagtttgaca 366
                |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 25339972 acttgaagggtgcaaacagaattgatgagttgtgcccaccaaatccaaatgagtttgaca 25340031

                                                                    
Query: 367      gcgccacctttacttcgcatctctccttctctgatcccaccaacacgcccac 418
                | ||||| || |||| ||||||||||||||  || || |||| |||||||||
Sbjct: 25340032 gtgccacattcactttgcatctctccttctgcgacccgaccagcacgcccac 25340083



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 64/68 (94%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                            
Query: 491      agcaacagcttctattccaccagctgctcctataagatgcccagtcattgattttggttg 550
                ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||
Sbjct: 25341503 agcaacagcttctattccaccagctgcacctattagatgtccagtcattgatttt-gttg 25341561

                        
Query: 551      agttcacc 558
                ||||||||
Sbjct: 25341562 agttcacc 25341569



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                            
Query: 421      ccactactttttctgggttctccaaattcagatttggatggacccaaccagttcttatag 480
                |||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 25340356 ccactattttctctgggttctccaaattcagattcggatggacccagccagttcttatag 25340415

                 
Query: 481      c 481
                |
Sbjct: 25340416 c 25340416



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 13       aacataggccataggctaca 32
                ||||||||||||||||||||
Sbjct: 25339650 aacataggccataggctaca 25339669



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 80      gatgtgcctgcgatgcgatg 99
               ||||||||||||||||||||
Sbjct: 9524906 gatgtgcctgcgatgcgatg 9524925

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>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1056G08
          Length = 168173

 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Plus

                                                                         
Query: 307   acttgaagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagtttgaca 366
             |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 33062 acttgaagggtgcaaacagaattgatgagttgtgcccaccaaatccaaatgagtttgaca 33121

                                                                 
Query: 367   gcgccacctttacttcgcatctctccttctctgatcccaccaacacgcccac 418
             | ||||| || |||| ||||||||||||||  || || |||| |||||||||
Sbjct: 33122 gtgccacattcactttgcatctctccttctgcgacccgaccagcacgcccac 33173



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 64/68 (94%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                         
Query: 491   agcaacagcttctattccaccagctgctcctataagatgcccagtcattgattttggttg 550
             ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||
Sbjct: 34593 agcaacagcttctattccaccagctgcacctattagatgtccagtcattgatttt-gttg 34651

                     
Query: 551   agttcacc 558
             ||||||||
Sbjct: 34652 agttcacc 34659



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                         
Query: 421   ccactactttttctgggttctccaaattcagatttggatggacccaaccagttcttatag 480
             |||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 33446 ccactattttctctgggttctccaaattcagattcggatggacccagccagttcttatag 33505

              
Query: 481   c 481
             |
Sbjct: 33506 c 33506



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    aacataggccataggctaca 32
             ||||||||||||||||||||
Sbjct: 32740 aacataggccataggctaca 32759

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>emb|Z34269.1|HVBKACPS4 H.vulgare (pMaW25) mRNA for beta-ketoacyl-ACP synthase
          Length = 2380

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Minus

                                                                        
Query: 312  aagggggcaaacagaattgatgagttatgcccaccaaatccaaatgagtttgacagcgcc 371
            ||||| ||||| | ||||||||| || |||||||| ||||||||||| || |||| ||| 
Sbjct: 1586 aagggtgcaaataaaattgatgaattgtgcccaccgaatccaaatgaattcgacaacgca 1527

                                                                        
Query: 372  acctttacttcgcatctctccttctctgatcccaccaacacgcccacgtccactactttt 431
            || || || || ||||||||||| | ||||||||||| || ||  || |||||   ||| 
Sbjct: 1526 actttcacgtcacatctctccttttgtgatcccaccagcaagctgacatccacatttttc 1467

                                                                        
Query: 432  tctgggttctccaaattcagatttggatggacccaaccagttcttatagcttgtacacaa 491
            || || || |  | ||| | ||| ||||||| ||||||||||||||||||||||| |  |
Sbjct: 1466 tccggattgtttagattgatattcggatggatccaaccagttcttatagcttgtatagca 1407

                                
Query: 492  gcaacagcttctattccacc 511
            || |||||||||||||||||
Sbjct: 1406 gctacagcttctattccacc 1387

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>gb|U67316.1|CWU67316 Cuphea wrightii beta-ketoacyl-ACP synthase II (CwKASII2) mRNA,
            complete cds
          Length = 2215

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 435  gggttctccaaattcagatttggatggacccaaccagttcttat 478
            ||||| |||||||| | ||||||||||| ||||||||| |||||
Sbjct: 1743 gggttttccaaattaatatttggatggatccaaccagtccttat 1700

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>gb|AY845865.1| Betula pendula plastid beta-ketoacyl ACP synthase mRNA, partial
           cds; nuclear gene for plastid product
          Length = 841

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 327 attgatgagttatgcccaccaaatccaaatgagtttgacagcgccac 373
           ||||||||||| || |||||||| |||||||| || |||| ||||||
Sbjct: 512 attgatgagttgtgaccaccaaacccaaatgaattagacaacgccac 466

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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 487     cacaagcaacagcttctattccaccag 513
               |||||||||||||||| ||||||||||
Sbjct: 1124935 cacaagcaacagcttcgattccaccag 1124909

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>gb|AF026149.1|AF026149 Perilla frutescens beta-ketoacyl-ACP synthase II (KAS II) mRNA,
            complete cds
          Length = 2072

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 318  gcaaacagaattgatgagttatgcccaccaaatccaaatgagtttgacagcgccacctt 376
            ||||||| ||| ||||||||||| |||||||| ||||| || || ||||  ||||||||
Sbjct: 1601 gcaaacaaaatcgatgagttatgaccaccaaacccaaacgaattagacaatgccacctt 1543

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>emb|AJ344250.1|CLA344250 Cuphea lanceolata mRNA for beta-ketoacyl-ACP synthase IV (kas4 gene)
          Length = 2033

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 441  tccaaattcagatttggatggacccaaccagttcttat 478
            |||||||| ||||||||||||| ||| ||||| |||||
Sbjct: 1514 tccaaattaagatttggatggatccacccagtccttat 1477

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>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 383     gcatctctccttctctgatccc 404
               ||||||||||||||||||||||
Sbjct: 1446126 gcatctctccttctctgatccc 1446105

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>gb|U67317.1|CWU67317 Cuphea wrightii beta-ketoacyl-ACP synthase II (CwKASII1) mRNA,
            complete cds
          Length = 2112

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 94/118 (79%)
 Strand = Plus / Minus

                                                                        
Query: 427  ctttttctgggttctccaaattcagatttggatggacccaaccagttcttatagcttgta 486
            |||| |||||||  |||||||| ||||||||||||| ||| || || ||||| || || |
Sbjct: 1644 ctttgtctgggtcttccaaattaagatttggatggatccacccggtccttatcgcctgaa 1585

                                                                      
Query: 487  cacaagcaacagcttctattccaccagctgctcctataagatgcccagtcattgattt 544
            |    | ||| |||||||  |||||||||||||| | |||||| ||  ||||||||||
Sbjct: 1584 ctacggtaactgcttctacaccaccagctgctccaagaagatgaccgatcattgattt 1527

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>dbj|AP004472.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT17P02, TM0006,
             complete sequence
          Length = 72374

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 495   acagcttctattccaccagctgctcctataagatgcccagtcattgattt 544
             ||||||||||  ||||||||||||||||  ||||| ||| |||| |||||
Sbjct: 16168 acagcttctacaccaccagctgctcctagtagatgaccaatcatagattt 16217

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>gb|AY815931.1| Schistosoma japonicum SJCHGC02809 protein mRNA, complete cds
          Length = 1587

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 272 gacaatgaagtaaacagatca 292
           |||||||||||||||||||||
Sbjct: 8   gacaatgaagtaaacagatca 28

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>gb|AF263992.1|AF263992 Coriandrum sativum beta-ketoacyl-ACP synthetase I gene, complete cds;
            nuclear gene for a plastid product
          Length = 1727

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 332  tgagttatgcccaccaaatccaaatgagtttga 364
            |||||| || ||||||||||||||||| |||||
Sbjct: 1469 tgagttgtgtccaccaaatccaaatgaatttga 1437

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>gb|AC123644.8| Mus musculus chromosome 15, clone RP23-85G7, complete sequence
          Length = 186827

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 439    tctccaaattcagatttggat 459
              |||||||||||||||||||||
Sbjct: 176173 tctccaaattcagatttggat 176193

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>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence
          Length = 182058

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 439    tctccaaattcagatttggat 459
              |||||||||||||||||||||
Sbjct: 161200 tctccaaattcagatttggat 161180

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>emb|AL117190.6|CNS01DRF Human chromosome 14 DNA sequence BAC R-123M6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165049

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 505    ttccaccagctgctcctataa 525
              |||||||||||||||||||||
Sbjct: 132117 ttccaccagctgctcctataa 132137

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>dbj|AP002986.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-121M22, complete
              sequence
          Length = 157963

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 422    cactactttttctgggttctc 442
              |||||||||||||||||||||
Sbjct: 122845 cactactttttctgggttctc 122825

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>gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete sequence
          Length = 168850

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    tatagcttgtacacaagcaa 495
              ||||||||||||||||||||
Sbjct: 139369 tatagcttgtacacaagcaa 139388

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>gb|BT014362.1| Lycopersicon esculentum clone 133648F, mRNA sequence
          Length = 1999

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 345  ccaaatccaaatgagtttga 364
            ||||||||||||||||||||
Sbjct: 1352 ccaaatccaaatgagtttga 1333

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>gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete sequence
          Length = 157296

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 333    gagttatgcccaccaaatccaaatgagtttga 364
              ||||| || ||||||||||||||||| |||||
Sbjct: 132642 gagttgtgtccaccaaatccaaatgaatttga 132673

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>emb|AL512623.5| Human DNA sequence from clone RP11-501G7 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 84015

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   accagttcttatagcttgta 486
             ||||||||||||||||||||
Sbjct: 48913 accagttcttatagcttgta 48932

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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 239     atatgcagttccagttccat 258
               ||||||||||||||||||||
Sbjct: 4716980 atatgcagttccagttccat 4716961

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>gb|AE012078.1| Xanthomonas axonopodis pv. citri str. 306,  section 456 of 469 of the
            complete genome
          Length = 11662

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  atatgcagttccagttccat 258
            ||||||||||||||||||||
Sbjct: 2361 atatgcagttccagttccat 2342

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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     tatatgcagttccagttcca 257
               ||||||||||||||||||||
Sbjct: 2379479 tatatgcagttccagttcca 2379498

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>emb|CR318586.3| Zebrafish DNA sequence from clone CH211-239O22 in linkage group 7,
           complete sequence
          Length = 30205

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 384 catctctccttctctgatcc 403
           ||||||||||||||||||||
Sbjct: 964 catctctccttctctgatcc 983

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>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone
              BACR36D15, complete sequence
          Length = 159513

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    tatagcttgtacacaagcaa 495
              ||||||||||||||||||||
Sbjct: 145961 tatagcttgtacacaagcaa 145942

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>ref|XM_395618.2| PREDICTED: Apis mellifera similar to GA11189-PA (LOC412154), mRNA
          Length = 2720

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 ccatgtaatattcaaagaag 212
           ||||||||||||||||||||
Sbjct: 441 ccatgtaatattcaaagaag 422

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>gb|AF331922.1|AF331922 Xanthomonas oryzae pv. oryzae putative siderophore receptor gene,
            partial cds; and putative hexuronate transporter,
            putative xylanase, secreted xylanase, and putative
            uronate isomerase genes, complete cds
          Length = 6907

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 239  atatgcagttccagttccat 258
            ||||||||||||||||||||
Sbjct: 3916 atatgcagttccagttccat 3935

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>gb|AC096570.1| Homo sapiens BAC clone RP11-368O18 from 2, complete sequence
          Length = 207972

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    catgtaatattcaaagaagc 213
              ||||||||||||||||||||
Sbjct: 153714 catgtaatattcaaagaagc 153733

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>gb|AC134903.4| Mus musculus BAC clone RP23-329A21 from chromosome 5, complete sequence
          Length = 198368

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   cccaccaaatccaaatgagt 360
             ||||||||||||||||||||
Sbjct: 31877 cccaccaaatccaaatgagt 31896

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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 335     gttatgcccaccaaatccaaatgagtttgaca 366
               |||||| || |||||||||||||| |||||||
Sbjct: 1168346 gttatgtcccccaaatccaaatgaatttgaca 1168377

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>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1059D01
          Length = 158792

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    gatgtgcctgcgatgcgatg 99
             ||||||||||||||||||||
Sbjct: 32636 gatgtgcctgcgatgcgatg 32655

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>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1100H02
          Length = 128773

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     gatgtgcctgcgatgcgatg 99
              ||||||||||||||||||||
Sbjct: 106892 gatgtgcctgcgatgcgatg 106911

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>gb|AC115853.8| Mus musculus chromosome 5, clone RP24-273B9, complete sequence
          Length = 188562

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    cccaccaaatccaaatgagt 360
              ||||||||||||||||||||
Sbjct: 183461 cccaccaaatccaaatgagt 183480

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>emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 in linkage group 7,
             complete sequence
          Length = 192578

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   catctctccttctctgatcc 403
             ||||||||||||||||||||
Sbjct: 64951 catctctccttctctgatcc 64932

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>emb|BX005071.4| Zebrafish DNA sequence from clone CH211-139O14 in linkage group 7,
              complete sequence
          Length = 174225

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    catctctccttctctgatcc 403
              ||||||||||||||||||||
Sbjct: 173189 catctctccttctctgatcc 173208

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>emb|CT476810.5| Zebrafish DNA sequence from clone ZFOS-260D6 in linkage group 7,
             complete sequence
          Length = 19313

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   catctctccttctctgatcc 403
             ||||||||||||||||||||
Sbjct: 18350 catctctccttctctgatcc 18331

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>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete
              sequence
          Length = 300896

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    tatagcttgtacacaagcaa 495
              ||||||||||||||||||||
Sbjct: 103859 tatagcttgtacacaagcaa 103840

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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 239     atatgcagttccagttccat 258
               ||||||||||||||||||||
Sbjct: 4720971 atatgcagttccagttccat 4720952


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,084,772
Number of Sequences: 3902068
Number of extensions: 5084772
Number of successful extensions: 91085
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90845
Number of HSP's gapped (non-prelim): 240
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result