ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF426408.1|AF426408 Drosophila virilis MEI-217 (mei-217) and ... 50 0.003
2gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome... 46 0.045
3emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 46 0.045
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.045
5dbj|AK103918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.045
6dbj|AK059823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.045
7dbj|AK059558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.045
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.045
9emb|AM167929.1| Chlamydomonas sp. ICE-L mRNA for 40S ribosomal p... 46 0.045
10gb|AY194365.1| Vitis vinifera putative 40S ribosomal protein S5 ... 44 0.18
11emb|X89368.1|SCDNARPS5 S.cerevisiae DNA for ribosomal protein S5... 44 0.18
12emb|Z49623.1|SCYJR123W S.cerevisiae chromosome X reading frame O... 44 0.18
13ref|NM_183433.2| Oryza sativa (japonica cultivar-group), mRNA 42 0.71
14gb|BT016516.1| Zea mays clone Contig349 mRNA sequence 42 0.71
15gb|BT016445.1| Zea mays clone Contig278 mRNA sequence 42 0.71
16ref|XM_958137.1| Neurospora crassa OR74A 40S RIBOSOMAL PROTEIN S... 42 0.71
17ref|XM_329833.1| Neurospora crassa OR74A 40S RIBOSOMAL PROTEIN S... 42 0.71
18gb|AF544131.1| Zea mays subsp. mays cultivar P39 endosperm-speci... 42 0.71
19gb|AF544129.1| Zea mays subsp. mays cultivar Oh43 endosperm-spec... 42 0.71
20gb|AF544128.1| Zea mays subsp. mays cultivar B103 endosperm-spec... 42 0.71
21gb|AF544123.1| Zea mays subsp. mays cultivar F2 endosperm-specif... 42 0.71
22gb|AF544113.1| Zea mays subsp. mays cultivar Pa91 endosperm-spec... 42 0.71
23gb|AF544112.1| Zea mays subsp. mays cultivar M162W endosperm-spe... 42 0.71
24gb|AF544107.1| Zea mays subsp. mays cultivar CML333 endosperm-sp... 42 0.71
25gb|AF544101.1| Zea mays subsp. mays cultivar B14A endosperm-spec... 42 0.71
26gb|AF544100.1| Zea mays subsp. mays cultivar A272 endosperm-spec... 42 0.71
27emb|BX842597.1| Neurospora crassa DNA linkage group II BAC clone... 42 0.71
28emb|BX842596.1| Neurospora crassa DNA linkage group II BAC clone... 42 0.71
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.71
30dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.71
31dbj|AK121523.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.71
32dbj|AK059844.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.71
33gb|AY103625.1| Zea mays PCO091587 mRNA sequence 42 0.71
34dbj|AP008219.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.71
35dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.71
36gb|AY692868.1| Saccharomyces cerevisiae clone FLH111166.01X YJR1... 40 2.8
37gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome... 40 2.8
38ref|NM_203330.1| Homo sapiens CD59 molecule, complement regulato... 40 2.8
39ref|NM_203331.1| Homo sapiens CD59 molecule, complement regulato... 40 2.8
40ref|NM_203329.1| Homo sapiens CD59 molecule, complement regulato... 40 2.8
41ref|NM_000611.4| Homo sapiens CD59 molecule, complement regulato... 40 2.8
42gb|BC033226.1| Homo sapiens CD59 molecule, complement regulatory... 40 2.8
43emb|AL049629.28|HSJ541C22 Human DNA sequence from clone RP4-541C... 40 2.8
44emb|BX059487.1|CNS09I2B Single read from an extremity of a full-... 40 2.8
45emb|BX050132.1|CNS09AUG Single read from an extremity of a full-... 40 2.8
46emb|BX035842.1|CNS08ZTI Single read from an extremity of a full-... 40 2.8
47dbj|AK095453.1| Homo sapiens cDNA FLJ38134 fis, clone D9OST2000440 40 2.8
48emb|BX321915.3| Zebrafish DNA sequence from clone CH211-250C19 i... 40 2.8
49gb|L34078.1|MUSXRCC1G Mus musculus DNA repair protein (XRCC1) ge... 40 2.8
50gb|AC084461.1|AC084461 Caenorhabditis briggsae cosmid CB033H10, ... 40 2.8
51emb|BX890639.3| Mouse DNA sequence from clone RP23-290E8 on chro... 40 2.8
52emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in... 40 2.8
53gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, comp... 40 2.8 
>gb|AF426408.1|AF426408 Drosophila virilis MEI-217 (mei-217) and MEI-218 (mei-218) genes,
            complete cds
          Length = 9598

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 185  tcttaacggttagccttggcaacacgctc 213
            ||||||||||||| |||||||||||||||
Sbjct: 3264 tcttaacggttagacttggcaacacgctc 3236
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>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0078f20, complete sequence
          Length = 151042

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 189   aacggttagccttggcaacacgctcga 215
             ||||||| |||||||||||||||||||
Sbjct: 68995 aacggttggccttggcaacacgctcga 69021
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
              hansenii
          Length = 2037969

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 181    tccatcttaacggttagccttggcaac 207
              ||||||||||||||||| |||||||||
Sbjct: 777218 tccatcttaacggttagacttggcaac 777244
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 189      aacggttagccttggcaacacgctcga 215
                ||||||| |||||||||||||||||||
Sbjct: 16328560 aacggttggccttggcaacacgctcga 16328586
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>dbj|AK103918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A08, full
           insert sequence
          Length = 884

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 189 aacggttagccttggcaacacgctcga 215
           ||||||| |||||||||||||||||||
Sbjct: 707 aacggttggccttggcaacacgctcga 681
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>dbj|AK059823.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E03, full
           insert sequence
          Length = 1022

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 189 aacggttagccttggcaacacgctcga 215
           ||||||| |||||||||||||||||||
Sbjct: 819 aacggttggccttggcaacacgctcga 793
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>dbj|AK059558.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G10, full
           insert sequence
          Length = 1012

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 189 aacggttagccttggcaacacgctcga 215
           ||||||| |||||||||||||||||||
Sbjct: 703 aacggttggccttggcaacacgctcga 677
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 189      aacggttagccttggcaacacgctcga 215
                ||||||| |||||||||||||||||||
Sbjct: 16418539 aacggttggccttggcaacacgctcga 16418565
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>emb|AM167929.1| Chlamydomonas sp. ICE-L mRNA for 40S ribosomal protein S5 (RPS5
           gene)
          Length = 747

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 187 ttaacggttagccttggcaacacgctc 213
           ||||||||| |||||||||||||||||
Sbjct: 616 ttaacggttggccttggcaacacgctc 590
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>gb|AY194365.1| Vitis vinifera putative 40S ribosomal protein S5 (Rps5) mRNA,
           partial cds
          Length = 661

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 184 atcttaacggttagccttggcaacacgctc 213
           |||| ||||||||||||||||||| |||||
Sbjct: 461 atctcaacggttagccttggcaactcgctc 432
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>emb|X89368.1|SCDNARPS5 S.cerevisiae DNA for ribosomal protein S5 gene
          Length = 1566

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 185  tcttaacggttagccttggcaacacg 210
            ||||||||||||| ||||||||||||
Sbjct: 1236 tcttaacggttagacttggcaacacg 1211
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>emb|Z49623.1|SCYJR123W S.cerevisiae chromosome X reading frame ORF YJR123w
          Length = 1622

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 185  tcttaacggttagccttggcaacacg 210
            ||||||||||||| ||||||||||||
Sbjct: 1311 tcttaacggttagacttggcaacacg 1286
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>ref|NM_183433.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 864

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 189 aacggttagccttggcaacacgctc 213
           ||||||| |||||||||||||||||
Sbjct: 679 aacggttcgccttggcaacacgctc 655
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>gb|BT016516.1| Zea mays clone Contig349 mRNA sequence
          Length = 818

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 189 aacggttagccttggcaacacgctc 213
           ||||||| |||||||||||||||||
Sbjct: 657 aacggttggccttggcaacacgctc 633
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>gb|BT016445.1| Zea mays clone Contig278 mRNA sequence
          Length = 1018

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 189 aacggttagccttggcaacacgctc 213
           ||||||| |||||||||||||||||
Sbjct: 699 aacggttggccttggcaacacgctc 675
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>ref|XM_958137.1| Neurospora crassa OR74A 40S RIBOSOMAL PROTEIN S5 (NCU09475.1)
           partial mRNA
          Length = 582

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 187 ttaacggttagccttggcaacacgctcga 215
           ||||||||| | |||||||||||||||||
Sbjct: 582 ttaacggttggacttggcaacacgctcga 554
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>ref|XM_329833.1| Neurospora crassa OR74A 40S RIBOSOMAL PROTEIN S5 (NCU09475.1)
           partial mRNA
          Length = 582

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 187 ttaacggttagccttggcaacacgctcga 215
           ||||||||| | |||||||||||||||||
Sbjct: 582 ttaacggttggacttggcaacacgctcga 554
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>gb|AF544131.1| Zea mays subsp. mays cultivar P39 endosperm-specific sucrose synthase
            (shrunken1) gene, partial sequence
          Length = 6536

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   gccgctacatcgaaatgttct 77
            |||||||||||||||||||||
Sbjct: 6174 gccgctacatcgaaatgttct 6194
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>gb|AF544129.1| Zea mays subsp. mays cultivar Oh43 endosperm-specific sucrose
            synthase (shrunken1) gene, partial sequence
          Length = 6565

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   gccgctacatcgaaatgttct 77
            |||||||||||||||||||||
Sbjct: 6203 gccgctacatcgaaatgttct 6223
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>gb|AF544128.1| Zea mays subsp. mays cultivar B103 endosperm-specific sucrose
            synthase (shrunken1) gene, partial sequence
          Length = 6554

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   gccgctacatcgaaatgttct 77
            |||||||||||||||||||||
Sbjct: 6192 gccgctacatcgaaatgttct 6212
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>gb|AF544123.1| Zea mays subsp. mays cultivar F2 endosperm-specific sucrose synthase
            (shrunken1) gene, partial sequence
          Length = 6696

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   gccgctacatcgaaatgttct 77
            |||||||||||||||||||||
Sbjct: 6324 gccgctacatcgaaatgttct 6344
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>gb|AF544113.1| Zea mays subsp. mays cultivar Pa91 endosperm-specific sucrose
            synthase (shrunken1) gene, partial sequence
          Length = 6738

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   gccgctacatcgaaatgttct 77
            |||||||||||||||||||||
Sbjct: 6370 gccgctacatcgaaatgttct 6390
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>gb|AF544112.1| Zea mays subsp. mays cultivar M162W endosperm-specific sucrose
            synthase (shrunken1) gene, partial sequence
          Length = 6591

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   gccgctacatcgaaatgttct 77
            |||||||||||||||||||||
Sbjct: 6224 gccgctacatcgaaatgttct 6244
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>gb|AF544107.1| Zea mays subsp. mays cultivar CML333 endosperm-specific sucrose
            synthase (shrunken1) gene, partial sequence
          Length = 6710

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   gccgctacatcgaaatgttct 77
            |||||||||||||||||||||
Sbjct: 6342 gccgctacatcgaaatgttct 6362
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>gb|AF544101.1| Zea mays subsp. mays cultivar B14A endosperm-specific sucrose
            synthase (shrunken1) gene, partial sequence
          Length = 6592

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   gccgctacatcgaaatgttct 77
            |||||||||||||||||||||
Sbjct: 6224 gccgctacatcgaaatgttct 6244
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>gb|AF544100.1| Zea mays subsp. mays cultivar A272 endosperm-specific sucrose
            synthase (shrunken1) gene, partial sequence
          Length = 6597

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   gccgctacatcgaaatgttct 77
            |||||||||||||||||||||
Sbjct: 6224 gccgctacatcgaaatgttct 6244
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>emb|BX842597.1| Neurospora crassa DNA linkage group II BAC clone B22K18
          Length = 75214

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 187   ttaacggttagccttggcaacacgctcga 215
             ||||||||| | |||||||||||||||||
Sbjct: 73211 ttaacggttggacttggcaacacgctcga 73183
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>emb|BX842596.1| Neurospora crassa DNA linkage group II BAC clone B10K17
          Length = 77292

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 187   ttaacggttagccttggcaacacgctcga 215
             ||||||||| | |||||||||||||||||
Sbjct: 44634 ttaacggttggacttggcaacacgctcga 44662
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             complete sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 189   aacggttagccttggcaacacgctc 213
             ||||||| |||||||||||||||||
Sbjct: 27417 aacggttcgccttggcaacacgctc 27393
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>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0672D08
          Length = 173729

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 189   aacggttagccttggcaacacgctc 213
             ||||||| |||||||||||||||||
Sbjct: 25219 aacggttcgccttggcaacacgctc 25195
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>dbj|AK121523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028P14, full
           insert sequence
          Length = 916

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 189 aacggttagccttggcaacacgctc 213
           ||||||| |||||||||||||||||
Sbjct: 689 aacggttcgccttggcaacacgctc 665
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>dbj|AK059844.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E02, full
           insert sequence
          Length = 864

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 189 aacggttagccttggcaacacgctc 213
           ||||||| |||||||||||||||||
Sbjct: 679 aacggttcgccttggcaacacgctc 655
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>gb|AY103625.1| Zea mays PCO091587 mRNA sequence
          Length = 1085

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 189 aacggttagccttggcaacacgctc 213
           ||||||| |||||||||||||||||
Sbjct: 750 aacggttggccttggcaacacgctc 726
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>dbj|AP008219.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             fosmid clone:OSJNOa264G09
          Length = 31687

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 189   aacggttagccttggcaacacgctc 213
             ||||||| |||||||||||||||||
Sbjct: 27417 aacggttcgccttggcaacacgctc 27393
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>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0402A09
          Length = 141966

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 189   aacggttagccttggcaacacgctc 213
             ||||||| |||||||||||||||||
Sbjct: 12347 aacggttcgccttggcaacacgctc 12323
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>gb|AY692868.1| Saccharomyces cerevisiae clone FLH111166.01X YJR123W gene, complete
           cds
          Length = 678

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 ttaacggttagccttggcaacacg 210
           ||||||||||| ||||||||||||
Sbjct: 678 ttaacggttagacttggcaacacg 655
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>gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome 5, complete sequence
          Length = 216207

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   aaaacacattcatttcaaaatctc 149
             |||||||||||||| |||||||||
Sbjct: 90436 aaaacacattcattacaaaatctc 90459
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>ref|NM_203330.1| Homo sapiens CD59 molecule, complement regulatory protein (CD59),
            transcript variant 1, mRNA
          Length = 7794

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   tgttctttcatcacaaactt 91
            ||||||||||||||||||||
Sbjct: 7396 tgttctttcatcacaaactt 7415
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>ref|NM_203331.1| Homo sapiens CD59 molecule, complement regulatory protein (CD59),
            transcript variant 4, mRNA
          Length = 7678

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   tgttctttcatcacaaactt 91
            ||||||||||||||||||||
Sbjct: 7280 tgttctttcatcacaaactt 7299
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>ref|NM_203329.1| Homo sapiens CD59 molecule, complement regulatory protein (CD59),
            transcript variant 3, mRNA
          Length = 7682

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   tgttctttcatcacaaactt 91
            ||||||||||||||||||||
Sbjct: 7284 tgttctttcatcacaaactt 7303
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>ref|NM_000611.4| Homo sapiens CD59 molecule, complement regulatory protein (CD59),
            transcript variant 2, mRNA
          Length = 7633

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   tgttctttcatcacaaactt 91
            ||||||||||||||||||||
Sbjct: 7235 tgttctttcatcacaaactt 7254
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>gb|BC033226.1| Homo sapiens CD59 molecule, complement regulatory protein, mRNA
           (cDNA clone IMAGE:5088648), with apparent retained
           intron
          Length = 1260

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  tgttctttcatcacaaactt 91
           ||||||||||||||||||||
Sbjct: 854 tgttctttcatcacaaactt 873
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>emb|AL049629.28|HSJ541C22 Human DNA sequence from clone RP4-541C22 on chromosome 11p13, complete
             sequence
          Length = 129298

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    tgttctttcatcacaaactt 91
             ||||||||||||||||||||
Sbjct: 43313 tgttctttcatcacaaactt 43332
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>emb|BX059487.1|CNS09I2B Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC4BD08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 848

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 186 cttaacggttagccttggcaacacgctc 213
           |||| ||||||| |||||||||||||||
Sbjct: 750 cttatcggttagacttggcaacacgctc 723
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>emb|BX050132.1|CNS09AUG Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC26BF03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 914

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 186 cttaacggttagccttggcaacacgctc 213
           |||| ||||||| |||||||||||||||
Sbjct: 726 cttatcggttagacttggcaacacgctc 699
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>emb|BX035842.1|CNS08ZTI Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA7BE03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 767

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 186 cttaacggttagccttggcaacacgctc 213
           |||| ||||||| |||||||||||||||
Sbjct: 738 cttatcggttagacttggcaacacgctc 711
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>dbj|AK095453.1| Homo sapiens cDNA FLJ38134 fis, clone D9OST2000440
          Length = 3567

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 72  tgttctttcatcacaaactt 91
           ||||||||||||||||||||
Sbjct: 408 tgttctttcatcacaaactt 389
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>emb|BX321915.3| Zebrafish DNA sequence from clone CH211-250C19 in linkage group 9,
              complete sequence
          Length = 123689

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    tgtaaaacacattcatttca 142
              ||||||||||||||||||||
Sbjct: 118874 tgtaaaacacattcatttca 118893
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>gb|L34078.1|MUSXRCC1G Mus musculus DNA repair protein (XRCC1) gene, partial sequence
          Length = 37349

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   catcacaaacttaaaagcat 99
            ||||||||||||||||||||
Sbjct: 1547 catcacaaacttaaaagcat 1528
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>gb|AC084461.1|AC084461 Caenorhabditis briggsae cosmid CB033H10, complete sequence
          Length = 85796

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   taaaacacattcatttcaaa 144
             ||||||||||||||||||||
Sbjct: 74607 taaaacacattcatttcaaa 74588
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>emb|BX890639.3| Mouse DNA sequence from clone RP23-290E8 on chromosome X, complete
             sequence
          Length = 150029

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    acttaaaagcatagctaaaa 107
             ||||||||||||||||||||
Sbjct: 93975 acttaaaagcatagctaaaa 93994
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>emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in linkage group 9, complete
              sequence
          Length = 213486

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    tgtaaaacacattcatttca 142
              ||||||||||||||||||||
Sbjct: 120860 tgtaaaacacattcatttca 120879
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>gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, complete sequence
          Length = 250028

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     catcacaaacttaaaagcat 99
              ||||||||||||||||||||
Sbjct: 132824 catcacaaacttaaaagcat 132843


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,927,565
Number of Sequences: 3902068
Number of extensions: 1927565
Number of successful extensions: 143025
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142823
Number of HSP's gapped (non-prelim): 202
length of query: 220
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 198
effective length of database: 17,147,199,772
effective search space: 3395145554856
effective search space used: 3395145554856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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