>MPRB_PIG (Q865K9) Membrane progestin receptor beta (mPR beta) (Progestin and|
           adipoQ receptor family member VIII)
          Length = 354

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
 Frame = -1

Query: 395 FTCVLPVIISKASCWTVF*SVDFWLDISGHGFE--NSLVDVCTILRLSSIFAHYSTKDDT 222
           F+C +P      SC           DI GHG +  ++ + +CT+ +L +I   Y  + + 
Sbjct: 262 FSCPVPEKYFPGSC-----------DIVGHGHQIFHAFLSICTLSQLEAILLDYKGRQE- 309

Query: 221 VFAHLSV**ASYVCYSIRLISMLCVHFVF-CSCSGIITSV--KLIYSRIRRED 72
           +F H          +S   I   C+ F F  +CSG   ++  + I +R+ ++D
Sbjct: 310 IFLHR---------HSPLSIYAACLSFFFLVACSGATAALLREKIKARLSKKD 353

>YG3L_YEAST (P48236) Hypothetical 51.6 kDa protein in RPL24B-RSR1 intergenic|
           region
          Length = 432

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = -3

Query: 360 FMLDGVLICGLLVGHQWTWF*KFFG*RMHDLEIVKYLCSLFYKRRHCLCSFICVISILCV 181
           F L  +   G L+G    WF  ++      L  +++      K  + L  F   +++LC+
Sbjct: 118 FTLFNIFFIGFLMGRFPEWFHVYYTILFFVLMPIRFYTYYKTKNHYFLADFCYFVNMLCL 177

Query: 180 L---QYPFNKHVMCAFCFLFVFG 121
           L    +P++ + +   CF F FG
Sbjct: 178 LFIWIFPYS-YSLFQSCFAFTFG 199

>ECX2_SULSO (Q9UXC0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 275

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = -1

Query: 377 VIISKASCWTVF*SVDFWLDISGHGFENSLVDVCTILRLSSIFAHYSTKDDTVFAH 210
           VI    S WTV      WLD+    +  +++D CT   L+S+ A Y+TK   V  H
Sbjct: 130 VIEPGKSVWTV------WLDVYVLDYGGNVLDACT---LASVAALYNTKVYKVEQH 176

>MPRB_HUMAN (Q8TEZ7) Membrane progestin receptor beta (mPR beta) (Progestin and|
           adipoQ receptor family member VIII) (Lysosomal membrane
           protein in brain-1)
          Length = 354

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
 Frame = -1

Query: 395 FTCVLPVIISKASCWTVF*SVDFWLDISGHGFE--NSLVDVCTILRLSSIFAHYSTKDDT 222
           F+C +P      SC           DI GHG +  ++ + +CT+ +L +I   Y  + + 
Sbjct: 262 FSCPVPEKYFPGSC-----------DIVGHGHQIFHAFLSICTLSQLEAILLDYQGRQEI 310

Query: 221 VFAHLSV**ASYVCYSIRLISMLCVHFVFCSCSGIITSVKL---IYSRIRRED 72
                         +    + M C+ F F +     T+  L   + +R+ ++D
Sbjct: 311 FLQR----------HGPLSVHMACLSFFFLAACSAATAALLRHKVKARLTKKD 353

>VE5_HPV51 (P26553) Probable protein E5|
          Length = 84

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 222 CLCSFICVISILCVLQYPFNKHVMCAFCFLFV 127
           C+C  +C +  L + QY F   ++   CF FV
Sbjct: 21  CVCLVLCCLLPLLLSQYVFAAALLLILCFWFV 52

>BLAR_STAAU (P18357) Regulatory protein blaR1|
          Length = 585

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 340 DLWTFGWTSVDMVLKILWLTYARS*DCQVSLLIILQKTTLSLLIYL 203
           D+  F W S+D +  ++W+           L+IIL    L  L+YL
Sbjct: 93  DIHKFNWDSIDNISTVIWIV----------LVIILSFKFLKALLYL 128

>GBRG2_MOUSE (P22723) Gamma-aminobutyric-acid receptor gamma-2 subunit precursor|
           (GABA(A) receptor)
          Length = 474

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 1   CCVFECKLGKWLHRQIH 51
           CC  +C+ G W H +IH
Sbjct: 426 CCFEDCRTGAWRHGRIH 442

>GBRG2_CHICK (P21548) Gamma-aminobutyric-acid receptor gamma-2 subunit precursor|
           (GABA(A) receptor)
          Length = 474

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 1   CCVFECKLGKWLHRQIH 51
           CC  +C+ G W H +IH
Sbjct: 426 CCFEDCRTGAWRHGRIH 442

>GBRG2_HUMAN (P18507) Gamma-aminobutyric-acid receptor gamma-2 subunit precursor|
           (GABA(A) receptor)
          Length = 467

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 1   CCVFECKLGKWLHRQIH 51
           CC  +C+ G W H +IH
Sbjct: 419 CCFEDCRTGAWRHGRIH 435

>GBRG2_BOVIN (P22300) Gamma-aminobutyric-acid receptor gamma-2 subunit precursor|
           (GABA(A) receptor)
          Length = 475

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 1   CCVFECKLGKWLHRQIH 51
           CC  +C+ G W H +IH
Sbjct: 427 CCFEDCRTGAWRHGRIH 443

>GBRG2_RAT (P18508) Gamma-aminobutyric-acid receptor gamma-2 subunit precursor|
           (GABA(A) receptor)
          Length = 466

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 1   CCVFECKLGKWLHRQIH 51
           CC  +C+ G W H +IH
Sbjct: 418 CCFEDCRTGAWRHGRIH 434


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,234,500
Number of Sequences: 219361
Number of extensions: 1093150
Number of successful extensions: 2829
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2828
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)