ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193869.1| Oryza sativa (japonica cultivar-group), predic... 105 1e-19
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
3dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
4dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
5dbj|AK102596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
6gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome... 100 8e-18
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 100 8e-18
9gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
10ref|NM_192656.1| Oryza sativa (japonica cultivar-group), predic... 40 6.7
11gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 ma... 40 6.7
12gb|AC127699.4| Mus musculus BAC clone RP24-114P21 from chromosom... 40 6.7
13gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosom... 40 6.7
14emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in l... 40 6.7
15ref|XM_726170.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.7
16emb|AL359837.21| Human DNA sequence from clone RP11-435P24 on ch... 40 6.7
17emb|AL390785.15| Human DNA sequence from clone RP11-325N9 on chr... 40 6.7
18ref|XM_963591.1| PREDICTED: Tribolium castaneum similar to CG149... 40 6.7
19ref|XM_794605.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 6.7
20emb|AL732488.7| Zebrafish DNA sequence from clone RP71-1C10 in l... 40 6.7
21gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosom... 40 6.7
22dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
23gb|DQ367843.1| Homo sapiens tyrosyl-DNA phosphodiesterase 1 (TDP... 40 6.7
24dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
25emb|AL954662.13| Mouse DNA sequence from clone RP23-348L16 on ch... 40 6.7
26dbj|AK121330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
27dbj|AK065107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
28gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, comp... 40 6.7
29emb|AL137128.4|CNS01DWD Human chromosome 14 DNA sequence BAC R-9... 40 6.7
30emb|BX004985.6| Mouse DNA sequence from clone RP23-320O16 on chr... 40 6.7
31emb|CR847564.6| Zebrafish DNA sequence from clone DKEY-190E10 in... 40 6.7 
>ref|NM_193869.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3024

 Score =  105 bits (53), Expect = 1e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                        
Query: 314  cggaccaggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtg 373
            |||| |||||||| ||||||||||||||||||||| |||||||| |||||||  ||  ||
Sbjct: 3011 cggaacaggaaagtatcaggaacagaagctggatccagctcataaaagccacagagtttg 2952

                                                                        
Query: 374  tcacctttttcttctgtcagacggtaagaangtatatggtgcgaaaacctcaagttctca 433
             |||| ||||||| |||||| ||| ||||| ||||  |||| |||||||| | ||| |||
Sbjct: 2951 ccaccgttttcttttgtcagccggaaagaaggtatcaggtgagaaaaccttatgttttca 2892

                                                                    
Query: 434  tttgcaggaatctccagaatacccctttctttgtcaaacctgaacacagctgtgta 489
            |||| ||| ||||||||| | |||||| |  |||||  | ||||||||||| ||||
Sbjct: 2891 tttgtaggtatctccagagtgccccttacactgtcaggcttgaacacagctctgta 2836
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  105 bits (53), Expect = 1e-19
 Identities = 145/176 (82%)
 Strand = Plus / Plus

                                                                            
Query: 314      cggaccaggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtg 373
                |||| |||||||| ||||||||||||||||||||| |||||||| |||||||  ||  ||
Sbjct: 15456681 cggaacaggaaagtatcaggaacagaagctggatccagctcataaaagccacagagtttg 15456740

                                                                            
Query: 374      tcacctttttcttctgtcagacggtaagaangtatatggtgcgaaaacctcaagttctca 433
                 |||| ||||||| |||||| ||| ||||| ||||  |||| |||||||| | ||| |||
Sbjct: 15456741 ccaccgttttcttttgtcagccggaaagaaggtatcaggtgagaaaaccttatgttttca 15456800

                                                                        
Query: 434      tttgcaggaatctccagaatacccctttctttgtcaaacctgaacacagctgtgta 489
                |||| ||| ||||||||| | |||||| |  |||||  | ||||||||||| ||||
Sbjct: 15456801 tttgtaggtatctccagagtgccccttacactgtcaggcttgaacacagctctgta 15456856



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 20       ttcaggttccttttcttcct 39
                ||||||||||||||||||||
Sbjct: 23739483 ttcaggttccttttcttcct 23739502
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>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1111C09
          Length = 156393

 Score =  105 bits (53), Expect = 1e-19
 Identities = 145/176 (82%)
 Strand = Plus / Plus

                                                                         
Query: 314   cggaccaggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtg 373
             |||| |||||||| ||||||||||||||||||||| |||||||| |||||||  ||  ||
Sbjct: 14190 cggaacaggaaagtatcaggaacagaagctggatccagctcataaaagccacagagtttg 14249

                                                                         
Query: 374   tcacctttttcttctgtcagacggtaagaangtatatggtgcgaaaacctcaagttctca 433
              |||| ||||||| |||||| ||| ||||| ||||  |||| |||||||| | ||| |||
Sbjct: 14250 ccaccgttttcttttgtcagccggaaagaaggtatcaggtgagaaaaccttatgttttca 14309

                                                                     
Query: 434   tttgcaggaatctccagaatacccctttctttgtcaaacctgaacacagctgtgta 489
             |||| ||| ||||||||| | |||||| |  |||||  | ||||||||||| ||||
Sbjct: 14310 tttgtaggtatctccagagtgccccttacactgtcaggcttgaacacagctctgta 14365
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>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1045D11
          Length = 142320

 Score =  105 bits (53), Expect = 1e-19
 Identities = 145/176 (82%)
 Strand = Plus / Plus

                                                                          
Query: 314    cggaccaggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtg 373
              |||| |||||||| ||||||||||||||||||||| |||||||| |||||||  ||  ||
Sbjct: 134222 cggaacaggaaagtatcaggaacagaagctggatccagctcataaaagccacagagtttg 134281

                                                                          
Query: 374    tcacctttttcttctgtcagacggtaagaangtatatggtgcgaaaacctcaagttctca 433
               |||| ||||||| |||||| ||| ||||| ||||  |||| |||||||| | ||| |||
Sbjct: 134282 ccaccgttttcttttgtcagccggaaagaaggtatcaggtgagaaaaccttatgttttca 134341

                                                                      
Query: 434    tttgcaggaatctccagaatacccctttctttgtcaaacctgaacacagctgtgta 489
              |||| ||| ||||||||| | |||||| |  |||||  | ||||||||||| ||||
Sbjct: 134342 tttgtaggtatctccagagtgccccttacactgtcaggcttgaacacagctctgta 134397
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>dbj|AK102596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098J19, full
            insert sequence
          Length = 3859

 Score =  105 bits (53), Expect = 1e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                        
Query: 314  cggaccaggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtg 373
            |||| |||||||| ||||||||||||||||||||| |||||||| |||||||  ||  ||
Sbjct: 3441 cggaacaggaaagtatcaggaacagaagctggatccagctcataaaagccacagagtttg 3382

                                                                        
Query: 374  tcacctttttcttctgtcagacggtaagaangtatatggtgcgaaaacctcaagttctca 433
             |||| ||||||| |||||| ||| ||||| ||||  |||| |||||||| | ||| |||
Sbjct: 3381 ccaccgttttcttttgtcagccggaaagaaggtatcaggtgagaaaaccttatgttttca 3322

                                                                    
Query: 434  tttgcaggaatctccagaatacccctttctttgtcaaacctgaacacagctgtgta 489
            |||| ||| ||||||||| | |||||| |  |||||  | ||||||||||| ||||
Sbjct: 3321 tttgtaggtatctccagagtgccccttacactgtcaggcttgaacacagctctgta 3266
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>gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0549G05, complete sequence
          Length = 147182

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                         
Query: 319   caggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtgtcacc 378
             ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| || ||||
Sbjct: 88538 caggaaaacatcaggaacagaagctggatcgagctcatagaagccacggagcctgccacc 88479

                           
Query: 379   tttttcttctgtca 392
             | ||||||||||||
Sbjct: 88478 tctttcttctgtca 88465



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                         
Query: 320   aggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtgtcacct 379
             |||||| | ||||||||||| |||||||| ||||||||||||||||| ||| || |||||
Sbjct: 76821 aggaaaacgtcaggaacagaggctggatcaagctcatagaagccacggagcttgccacct 76762

                               
Query: 380   ttttcttctgtcagacgg 397
              |||||||||||||||||
Sbjct: 76761 ctttcttctgtcagacgg 76744



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 327    catcaggaacagaagctggatctagctcatag 358
              |||||||||||| |||||| || |||||||||
Sbjct: 110761 catcaggaacagcagctgggtcgagctcatag 110730
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                            
Query: 319      caggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtgtcacc 378
                ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| || ||||
Sbjct: 20966926 caggaaaacatcaggaacagaagctggatcgagctcatagaagccacggagcctgccacc 20966867

                              
Query: 379      tttttcttctgtca 392
                | ||||||||||||
Sbjct: 20966866 tctttcttctgtca 20966853



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                            
Query: 320      aggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtgtcacct 379
                |||||| | ||||||||||| |||||||| ||||||||||||||||| ||| || |||||
Sbjct: 20955209 aggaaaacgtcaggaacagaggctggatcaagctcatagaagccacggagcttgccacct 20955150

                                  
Query: 380      ttttcttctgtcagacgg 397
                 |||||||||||||||||
Sbjct: 20955149 ctttcttctgtcagacgg 20955132



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                            
Query: 319      caggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtgtcacc 378
                ||||||| | |||||||||||||||||||| ||||||||||||||||| ||| || ||||
Sbjct: 20712273 caggaaaacgtcaggaacagaagctggatcgagctcatagaagccacggagcttgccacc 20712332

                              
Query: 379      tttttcttctgtca 392
                | ||||||||||||
Sbjct: 20712333 tctttcttctgtca 20712346



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 327      catcaggaacagaagctggatctagctcatag 358
                |||||||||||| |||||| || |||||||||
Sbjct: 20989149 catcaggaacagcagctgggtcgagctcatag 20989118
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                            
Query: 319      caggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtgtcacc 378
                ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| || ||||
Sbjct: 21277161 caggaaaacatcaggaacagaagctggatcgagctcatagaagccacggagcctgccacc 21277102

                              
Query: 379      tttttcttctgtca 392
                | ||||||||||||
Sbjct: 21277101 tctttcttctgtca 21277088



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                            
Query: 320      aggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtgtcacct 379
                |||||| | ||||||||||| |||||||| ||||||||||||||||| ||| || |||||
Sbjct: 21265444 aggaaaacgtcaggaacagaggctggatcaagctcatagaagccacggagcttgccacct 21265385

                                  
Query: 380      ttttcttctgtcagacgg 397
                 |||||||||||||||||
Sbjct: 21265384 ctttcttctgtcagacgg 21265367



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                            
Query: 319      caggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtgtcacc 378
                ||||||| | |||||||||||||||||||| ||||||||||||||||| ||| || ||||
Sbjct: 21022508 caggaaaacgtcaggaacagaagctggatcgagctcatagaagccacggagcttgccacc 21022567

                              
Query: 379      tttttcttctgtca 392
                | ||||||||||||
Sbjct: 21022568 tctttcttctgtca 21022581



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 327      catcaggaacagaagctggatctagctcatag 358
                |||||||||||| |||||| || |||||||||
Sbjct: 21299384 catcaggaacagcagctgggtcgagctcatag 21299353
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>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0093J03, complete sequence
          Length = 200626

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                         
Query: 319   caggaaagcatcaggaacagaagctggatctagctcatagaagccacgaagcgtgtcacc 378
             ||||||| | |||||||||||||||||||| ||||||||||||||||| ||| || ||||
Sbjct: 19334 caggaaaacgtcaggaacagaagctggatcgagctcatagaagccacggagcttgccacc 19393

                           
Query: 379   tttttcttctgtca 392
             | ||||||||||||
Sbjct: 19394 tctttcttctgtca 19407
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>ref|NM_192656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 20  ttcaggttccttttcttcct 39
           ||||||||||||||||||||
Sbjct: 645 ttcaggttccttttcttcct 626
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>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence
          Length = 191014

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    caggaaagcatcaggaacag 338
              ||||||||||||||||||||
Sbjct: 138665 caggaaagcatcaggaacag 138646
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>gb|AC127699.4| Mus musculus BAC clone RP24-114P21 from chromosome 7, complete sequence
          Length = 152811

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    ttccttttcttcctagtctttcat 49
             ||||||||||||||||||| ||||
Sbjct: 67408 ttccttttcttcctagtctatcat 67385
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>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence
          Length = 210014

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    caggaaagcatcaggaacag 338
              ||||||||||||||||||||
Sbjct: 167032 caggaaagcatcaggaacag 167013
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>emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in linkage group 3,
             complete sequence
          Length = 168285

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   tgcagataacattttcatag 212
             ||||||||||||||||||||
Sbjct: 26411 tgcagataacattttcatag 26430
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>ref|XM_726170.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03268)
            partial mRNA
          Length = 2193

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  ttgattggaagtaattcaat 276
            ||||||||||||||||||||
Sbjct: 1444 ttgattggaagtaattcaat 1463
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>emb|AL359837.21| Human DNA sequence from clone RP11-435P24 on chromosome 1 Contains the
             FMOD gene for fibromodulin, a small EDRK-rich factor 2
             (SERF2) pseudogene and a CpG island, complete sequence
          Length = 128757

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   caggaaagcatcaggaacag 338
             ||||||||||||||||||||
Sbjct: 15590 caggaaagcatcaggaacag 15571
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>emb|AL390785.15| Human DNA sequence from clone RP11-325N9 on chromosome 10, complete
              sequence
          Length = 203169

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    taaaacatctagaaatacag 164
              ||||||||||||||||||||
Sbjct: 195765 taaaacatctagaaatacag 195784
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>ref|XM_963591.1| PREDICTED: Tribolium castaneum similar to CG14905-PA (LOC657111),
           mRNA
          Length = 2931

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 26  ttccttttcttcctagtctttcat 49
           ||||||||||||| ||||||||||
Sbjct: 816 ttccttttcttccaagtctttcat 793
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>ref|XM_794605.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC574952 (LOC574952), mRNA
          Length = 970

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 ttggaagtaattcaatgtca 280
           ||||||||||||||||||||
Sbjct: 591 ttggaagtaattcaatgtca 572
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>emb|AL732488.7| Zebrafish DNA sequence from clone RP71-1C10 in linkage group 12
             Contains part of a novel ring finger gene, a novel zinc
             finger pseudogene, a novel zinc finger gene and a novel
             gene similar to valop (vertebrate ancient long opsin),
             complete sequence
          Length = 165151

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    tccacaacagaaatggccaaaata 122
             ||||| ||||||||||||||||||
Sbjct: 62925 tccaccacagaaatggccaaaata 62948
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>gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosome 9, complete sequence
          Length = 188292

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ttcaggttccttttcttcct 39
             ||||||||||||||||||||
Sbjct: 34731 ttcaggttccttttcttcct 34712
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>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F01
          Length = 163671

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ttcaggttccttttcttcct 39
              ||||||||||||||||||||
Sbjct: 117187 ttcaggttccttttcttcct 117206
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>gb|DQ367843.1| Homo sapiens tyrosyl-DNA phosphodiesterase 1 (TDP1) gene, complete cds
          Length = 92631

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    ttcaggttccttttcttcct 39
             ||||||||||||||||||||
Sbjct: 81868 ttcaggttccttttcttcct 81887
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>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0681B11
          Length = 144091

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    ttcaggttccttttcttcct 39
             ||||||||||||||||||||
Sbjct: 20068 ttcaggttccttttcttcct 20087
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>emb|AL954662.13| Mouse DNA sequence from clone RP23-348L16 on chromosome 2, complete
             sequence
          Length = 132427

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    gctttcataaggtccacaac 106
             ||||||||||||||||||||
Sbjct: 28037 gctttcataaggtccacaac 28018
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>dbj|AK121330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118F05, full
            insert sequence
          Length = 3759

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 327  catcaggaacagaagctggatctagctcatag 358
            |||||||||||| |||||| || |||||||||
Sbjct: 3397 catcaggaacagcagctgggtcgagctcatag 3366
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>dbj|AK065107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N19, full
           insert sequence
          Length = 1556

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 20  ttcaggttccttttcttcct 39
           ||||||||||||||||||||
Sbjct: 945 ttcaggttccttttcttcct 926
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>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence
          Length = 200326

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 157    aaatacagagagcctaactgagaa 180
              |||||||||||| |||||||||||
Sbjct: 118021 aaatacagagagtctaactgagaa 118044
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>emb|AL137128.4|CNS01DWD Human chromosome 14 DNA sequence BAC R-951P22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 228652

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ttcaggttccttttcttcct 39
              ||||||||||||||||||||
Sbjct: 166397 ttcaggttccttttcttcct 166416
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>emb|BX004985.6| Mouse DNA sequence from clone RP23-320O16 on chromosome 2, complete
             sequence
          Length = 208765

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   ttcaatgtcagcttccaagt 290
             ||||||||||||||||||||
Sbjct: 38479 ttcaatgtcagcttccaagt 38460
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>emb|CR847564.6| Zebrafish DNA sequence from clone DKEY-190E10 in linkage group 14,
             complete sequence
          Length = 122704

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    tccacaacagaaatggccaaaata 122
             ||||| ||||||||||||||||||
Sbjct: 92538 tccaccacagaaatggccaaaata 92561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,505,669
Number of Sequences: 3902068
Number of extensions: 4505669
Number of successful extensions: 110956
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110796
Number of HSP's gapped (non-prelim): 160
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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