>RL19C_ARATH (P49693) 60S ribosomal protein L19-3|
          Length = 208

 Score =  111 bits (278), Expect = 1e-24
 Identities = 56/82 (68%), Positives = 61/82 (74%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXX 350
           RLL+KYRE KKID+HMYHDMY+KVKGN+FKNKRVLMESIHKSKAEKAREKTLSDQF    
Sbjct: 104 RLLKKYRETKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKR 163

Query: 349 XXXXXXXXXXXXXXXXRLAQGP 284
                           RLA+GP
Sbjct: 164 AKNKASRERKHARREERLAKGP 185

>RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1|
          Length = 214

 Score =  111 bits (278), Expect = 1e-24
 Identities = 56/82 (68%), Positives = 61/82 (74%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXX 350
           RLL+KYRE KKIDKHMYHDMY++VKGN+FKNKRVLMESIHKSKAEKAREKTLSDQF    
Sbjct: 104 RLLKKYRETKKIDKHMYHDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKR 163

Query: 349 XXXXXXXXXXXXXXXXRLAQGP 284
                           RLA+GP
Sbjct: 164 AKNKASRERKHARREERLAKGP 185

>RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2|
          Length = 209

 Score =  107 bits (267), Expect = 2e-23
 Identities = 54/82 (65%), Positives = 59/82 (71%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXX 350
           R L KYRE+KKID+HMYHDMY+KVKGN+FKNKRVLMESIHK KAEKAREKTL+DQF    
Sbjct: 104 RFLSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKR 163

Query: 349 XXXXXXXXXXXXXXXXRLAQGP 284
                           RLAQGP
Sbjct: 164 IKNKASRERKFARREERLAQGP 185

>RL19_RAT (P84100) 60S ribosomal protein L19|
          Length = 196

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLR+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 104 RLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158

>RL19_PONPY (Q5RB99) 60S ribosomal protein L19|
          Length = 196

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLR+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 104 RLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158

>RL19_MOUSE (P84099) 60S ribosomal protein L19|
          Length = 196

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLR+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 104 RLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158

>RL19_MACFA (Q8HXN9) 60S ribosomal protein L19|
          Length = 196

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLR+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 104 RLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158

>RL19_HUMAN (P84098) 60S ribosomal protein L19|
          Length = 196

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLR+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 104 RLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158

>RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19|
          Length = 196

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLR+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 104 RLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158

>RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19|
          Length = 197

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLR+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 104 RLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158

>RL19_BRARE (Q6P5L3) 60S ribosomal protein L19|
          Length = 196

 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 41/55 (74%), Positives = 50/55 (90%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLR+YREAKKID+HMYH +YL+ KGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 104 RLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158

>RL19_ICTPU (Q90YU8) 60S ribosomal protein L19|
          Length = 196

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 40/55 (72%), Positives = 50/55 (90%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLR+YRE+KKID+HMYH +YL+ KGN+FKNKR+LME IHK KA++AR+K LSDQ
Sbjct: 104 RLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQ 158

>RL19_DROME (P36241) 60S ribosomal protein L19|
          Length = 203

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLL+KYR++KKID+H+YHD+Y+K KGN+FKNKRVLME IHK KAEK R K L+DQ
Sbjct: 104 RLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158

>RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specific protein|
           V14) (22 kDa calmodulin-binding protein)
          Length = 186

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLL+KYREAKKIDKH Y ++YLK KGN+FKNKR L+E I KSK EK REK + DQ
Sbjct: 104 RLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQ 158

>RL19_CAEEL (O02639) 60S ribosomal protein L19|
          Length = 198

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 33/54 (61%), Positives = 43/54 (79%)
 Frame = -1

Query: 526 LLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           LLR+YR+AKK+DKH+YH++YL+ KGN FKNK+ L+E I K K E  R K L+DQ
Sbjct: 105 LLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQ 158

>RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15)|
          Length = 192

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLLRKYRE+ KIDKH+YH +YL+ KGN FK+KR L+E I ++KAE  R K + +Q
Sbjct: 103 RLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQ 157

>RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L)|
          Length = 188

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 31/55 (56%), Positives = 43/55 (78%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 365
           RLL KYR+A KIDKH+YH +Y + KGN FK+KR L+E I ++KA+  REK L+++
Sbjct: 103 RLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEE 157

>RL19_PYRHO (O59437) 50S ribosomal protein L19e|
          Length = 150

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 425
           R LRK +E KKID+  Y  +Y++ KG  FKNK  L
Sbjct: 104 RELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138

>RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e|
          Length = 151

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -1

Query: 523 LRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAR 386
           LRK +E KKID+  Y  +Y++ KG  FK+K  L   + +    K R
Sbjct: 106 LRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151

>RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19)|
          Length = 150

 Score = 37.4 bits (85), Expect = 0.026
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -1

Query: 523 LRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 425
           LRK +  KKID+  Y  +Y++ KG  FKNK  L
Sbjct: 106 LRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138

>RL19_SULAC (O05639) 50S ribosomal protein L19e|
          Length = 150

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = -1

Query: 529 RLLRKYREAKKIDKHMYHDMYLKVKGNMFKN----KRVLMESIHK 407
           R +R  R+   IDKH Y  +Y + KGN FKN    K  L +  HK
Sbjct: 105 RYIRWLRDNNVIDKHTYRLLYKRAKGNYFKNLSDVKSYLRQMGHK 149

>RL19_SULSO (Q9UX89) 50S ribosomal protein L19e|
          Length = 151

 Score = 32.7 bits (73), Expect = 0.63
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 523 LRKYREAKKIDKHMYHDMYLKVKGNMFK 440
           L+  R+ K ID+H Y ++YLK KG  +K
Sbjct: 107 LKWLRDHKVIDRHTYRELYLKTKGGNYK 134

>NU1M_RAT (P03889) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 318

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 9/50 (18%)
 Frame = +3

Query: 384 SLAFSALDLWILS---------MRTLLFLNMLPLTFRYMSWYMCLSIFFA 506
           +L  S   LWI +         +  LL+ N LPLT  +  WY+ L IF A
Sbjct: 263 TLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYISLPIFLA 312

>NU1M_HYLLA (Q96126) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 318

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
 Frame = +3

Query: 384 SLAFSALDLWILS---------MRTLLFLNMLPLTFRYMSWYMCLSIFFAS 509
           +L  ++L LWI +         +  LL+ N LPLT   + WY+ LS   AS
Sbjct: 263 TLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLTLLMWYISLSTMIAS 313

>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -2

Query: 348 PRARQAGRGRLPGGRRDWPRAP 283
           PR R+  RGR  G RRDW RAP
Sbjct: 59  PRRRRGNRGR--GQRRDWSRAP 78

>RR3_MESVI (Q9MUU2) Chloroplast 30S ribosomal protein S3|
          Length = 213

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 11/47 (23%)
 Frame = -2

Query: 396 RRQERRPYLTSLRPSVPRARQAG--------RGRLPG---GRRDWPR 289
           R QER+P+  ++R +V RA++AG         GRL G    R +W R
Sbjct: 125 RLQERKPFRRAIRQAVQRAKRAGVQGIKIQVAGRLNGAEIARSEWVR 171

>Y505_MYCPN (P75281) Hypothetical protein MPN505 (P02_orf253)|
          Length = 253

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 505 AKKIDKHMYHDMYLKVKGNMFKNKRVLMES-IHKSKAEKAREKTLS 371
           AKK DKH Y D++LK+K N    K+   E  + K +  K   K ++
Sbjct: 153 AKKGDKH-YFDLFLKIKSNSDPKKQFTTEKFLTKEEKNKVNGKEIT 197

>POLS_RUBVH (P21480) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 348 PRARQAGRGRLPGGRRDWPRAP 283
           PR R+  RGR  G R+DW RAP
Sbjct: 59  PRRRRGNRGR--GQRKDWSRAP 78

>NXF1_COTJA (P58797) Nuclear RNA export factor 1 (Tip-associating protein)|
           (Tip-associated protein) (mRNA export factor TAP)
          Length = 616

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 393 RQERRPYLTSLRPSVPRARQAGRGRLPGGRRDW 295
           R  R P+LT +R  +P   ++G G   GGRR+W
Sbjct: 85  RPSRAPHLT-VRRDLPPPDRSGGGSRDGGRRNW 116

>NU1M_HALGR (P38598) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 318

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
 Frame = +3

Query: 378 VFSLAFSALDLWILS---------MRTLLFLNMLPLTFRYMSWYMCLSIFFAS 509
           V +LA + L LWI +         +  LL+ N LPLT     W++ L I  AS
Sbjct: 261 VKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISAS 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,491,194
Number of Sequences: 219361
Number of extensions: 831189
Number of successful extensions: 2467
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2465
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)