ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags3e15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_523705.1| PREDICTED: Pan troglodytes similar to G protein-coupled receptor family C, group 5, member C isoform a; retinoic acid responsive gene protein; orphan G-protein coupled receptor (LOC468316), mRNA Length = 1581 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 774 catgtatacttacggcaacaagcagcaca 802
>gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094L06, complete sequence Length = 189328 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 124905 cgccgtcaccgtcgtcgccgc 124885
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 4227 cgccgtcaccgtcgtcgccgc 4207
>gb|AC079325.10| Homo sapiens chromosome 17, clone RP11-194J3, complete sequence Length = 191746 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 155603 catgtatacttacggcaacaagcagcaca 155575
>ref|NM_018653.3| Homo sapiens G protein-coupled receptor, family C, group 5, member C (GPRC5C), transcript variant 2, mRNA Length = 1836 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 876 catgtatacttacggcaacaagcagcaca 904
>ref|NM_022036.2| Homo sapiens G protein-coupled receptor, family C, group 5, member C (GPRC5C), transcript variant 1, mRNA Length = 2389 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 1429 catgtatacttacggcaacaagcagcaca 1457
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 559 cgagcgcggcggcgagcttca 579 ||||||||||||||||||||| Sbjct: 1678801 cgagcgcggcggcgagcttca 1678781
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence Length = 147941 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 130616 cgccgtcaccgtcgtcgccgc 130636
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 accgtcgtcgccgcgagcgcg 539 ||||||||||||||||||||| Sbjct: 82565 accgtcgtcgccgcgagcgcg 82545
>gb|BT007435.1| Homo sapiens G protein-coupled receptor, family C, group 5, member C mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 783 catgtatacttacggcaacaagcagcaca 811
>dbj|AK131210.1| Homo sapiens cDNA FLJ16084 fis, clone NT2RI2009583, highly similar to Homo sapiens orphan G-protein coupled receptor (GPRC5C) mRNA Length = 2986 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 2044 catgtatacttacggcaacaagcagcaca 2072
>emb|CR622350.1| full-length cDNA clone CS0DI013YL10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1728 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 822 catgtatacttacggcaacaagcagcaca 850
>dbj|AK075397.1| Homo sapiens cDNA PSEC0087 fis, clone PLACE1001022, highly similar to G protein-coupled receptor, family C, group 5, member C isoform a, precursor Length = 1808 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 867 catgtatacttacggcaacaagcagcaca 895
>emb|CR597806.1| full-length cDNA clone CS0DK005YN05 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1796 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 884 catgtatacttacggcaacaagcagcaca 912
>emb|CR595715.1| full-length cDNA clone CS0DI031YJ06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1609 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 697 catgtatacttacggcaacaagcagcaca 725
>emb|CR592340.1| full-length cDNA clone CS0DI045YA17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1757 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 853 catgtatacttacggcaacaagcagcaca 881
>gb|AF207989.1|AF207989 Homo sapiens orphan G-protein coupled receptor (GPRC5C) mRNA, complete cds Length = 1824 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 865 catgtatacttacggcaacaagcagcaca 893
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 16252055 cgccgtcaccgtcgtcgccgc 16252035
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 16138681 cgccgtcaccgtcgtcgccgc 16138661 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 1259999 cgccgtcaccgtcgtcgccgc 1259979
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 32226176 cgccgtcaccgtcgtcgccgc 32226196
>gb|BC016860.1| Homo sapiens G protein-coupled receptor, family C, group 5, member C, mRNA (cDNA clone IMAGE:3904655), partial cds Length = 1824 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 806 catgtatacttacggcaacaagcagcaca 834
>dbj|AK222909.1| Homo sapiens mRNA for G protein-coupled receptor family C, group 5, member C isoform b variant, clone: HRC02861 Length = 1807 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 847 catgtatacttacggcaacaagcagcaca 875
>gb|AC090676.11| Homo sapiens 12 BAC RP11-654D6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 139802 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 gcggatctcggcctcccgctccacc 401 |||||||| |||||||||||||||| Sbjct: 108410 gcggatctaggcctcccgctccacc 108386
>dbj|AB119479.1| Nicotiana tabacum mRNA for 14-3-3 h-2 protein, complete cds Length = 1047 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 gacgccattgatgtttctgtg 602 ||||||||||||||||||||| Sbjct: 72 gacgccattgatgtttctgtg 52
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 70189 cgccgtcaccgtcgtcgccgc 70209
>gb|AY888884.1| Synthetic construct Homo sapiens clone FLH014663.01X G protein-coupled receptor family C group 5 member C (GPRC5C) mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 783 catgtatacttacggcaacaagcagcaca 811
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 2008 cgccgtcaccgtcgtcgccgc 2028
>emb|AJ276102.1|HSA276102 Homo sapiens mRNA for GPRC5C protein Length = 1428 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 885 catgtatacttacggcaacaagcagcaca 913
>gb|AY105500.1| Zea mays PCO104637 mRNA sequence Length = 588 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 ctcggcctcccgctccacctg 403 ||||||||||||||||||||| Sbjct: 434 ctcggcctcccgctccacctg 454
>gb|BC110848.1| Homo sapiens G protein-coupled receptor, family C, group 5, member C, transcript variant 1, mRNA (cDNA clone MGC:131820 IMAGE:5588871), complete cds Length = 2540 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 catgcatacttacgtcaacaagcagcaca 226 |||| ||||||||| |||||||||||||| Sbjct: 1560 catgtatacttacggcaacaagcagcaca 1588
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 16228703 cgccgtcaccgtcgtcgccgc 16228683 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 1257720 cgccgtcaccgtcgtcgccgc 1257700
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 16205288 cgccgtcaccgtcgtcgccgc 16205268
>emb|BX672566.2|CNS09SC4 Oryza sativa chromosome 12, . Partial sequence from BAC B1004E12 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 24190 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgc 532 ||||||||||||||||||||| Sbjct: 21910 cgccgtcaccgtcgtcgccgc 21890
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ctcggcctcccgctccacct 402 |||||||||||||||||||| Sbjct: 21286 ctcggcctcccgctccacct 21267
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 acgccgtcaccgtcgtcgcc 530 |||||||||||||||||||| Sbjct: 2851129 acgccgtcaccgtcgtcgcc 2851148 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cgggtacgccgtcaccgtcg 525 |||||||||||||||||||| Sbjct: 381616 cgggtacgccgtcaccgtcg 381597 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cgggtacgccgtcaccgtcg 525 |||||||||||||||||||| Sbjct: 381526 cgggtacgccgtcaccgtcg 381507
>ref|NM_187555.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ctcggcctcccgctccacct 402 |||||||||||||||||||| Sbjct: 322 ctcggcctcccgctccacct 341
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cgtcgccgcgagcgcggcgc 543 |||||||||||||||||||| Sbjct: 3473401 cgtcgccgcgagcgcggcgc 3473420 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 cgcgagcgcggcgcacacggcgac 553 |||||||||||||||| ||||||| Sbjct: 323442 cgcgagcgcggcgcacgcggcgac 323465
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 557 aacgagcgcggcggcgagcttcacggac 584 ||||||||||||||||||| ||| |||| Sbjct: 322179 aacgagcgcggcggcgagcatcagggac 322152
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 cgagcgcggcggcgagcttc 578 |||||||||||||||||||| Sbjct: 2977875 cgagcgcggcggcgagcttc 2977894 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 ccgtcgtcgccgcgagcgcg 539 |||||||||||||||||||| Sbjct: 342454 ccgtcgtcgccgcgagcgcg 342473
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 cgtcgtcgccgcgagcgcgg 540 |||||||||||||||||||| Sbjct: 2204766 cgtcgtcgccgcgagcgcgg 2204747 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 cgcgagcgcggcgcacacggcgac 553 |||||||||||||||| ||||||| Sbjct: 1054463 cgcgagcgcggcgcacgcggcgac 1054486 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 tcgtcgccgcgagcgcggcg 542 |||||||||||||||||||| Sbjct: 543099 tcgtcgccgcgagcgcggcg 543118 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cgtcgccgcgagcgcggcgc 543 |||||||||||||||||||| Sbjct: 509635 cgtcgccgcgagcgcggcgc 509654
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ctcggcctcccgctccacct 402 |||||||||||||||||||| Sbjct: 864751 ctcggcctcccgctccacct 864732
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 ccgtcgtcgccgcgagcgcg 539 |||||||||||||||||||| Sbjct: 1661518 ccgtcgtcgccgcgagcgcg 1661537 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 cgagcgcggcggcgagcttc 578 |||||||||||||||||||| Sbjct: 1156578 cgagcgcggcggcgagcttc 1156597 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cgtcgccgcgagcgcggcgc 543 |||||||||||||||||||| Sbjct: 419742 cgtcgccgcgagcgcggcgc 419761
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 cgtcgtcgccgcgagcgcgg 540 |||||||||||||||||||| Sbjct: 2169870 cgtcgtcgccgcgagcgcgg 2169889 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 cgcgagcgcggcgcacacggcgac 553 |||||||||||||||| ||||||| Sbjct: 935463 cgcgagcgcggcgcacgcggcgac 935486 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 tcgtcgccgcgagcgcggcg 542 |||||||||||||||||||| Sbjct: 351769 tcgtcgccgcgagcgcggcg 351788 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cgtcgccgcgagcgcggcgc 543 |||||||||||||||||||| Sbjct: 318250 cgtcgccgcgagcgcggcgc 318269
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 cgccgcgagcgcggcgcaca 546 |||||||||||||||||||| Sbjct: 241295 cgccgcgagcgcggcgcaca 241314
>gb|AC016638.9| Homo sapiens chromosome 5 clone RP11-365H8, complete sequence Length = 182823 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 tcttcatgcaggagagatgc 314 |||||||||||||||||||| Sbjct: 111340 tcttcatgcaggagagatgc 111359
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 cgtcgccgcgagcgcggcgc 543 |||||||||||||||||||| Sbjct: 1568641 cgtcgccgcgagcgcggcgc 1568622 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 cgagcgcggcggcgagcttc 578 |||||||||||||||||||| Sbjct: 1471338 cgagcgcggcggcgagcttc 1471319 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 ccgtcgtcgccgcgagcgcg 539 |||||||||||||||||||| Sbjct: 1111966 ccgtcgtcgccgcgagcgcg 1111985
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 tcgtcgccgcgagcgcggcg 542 |||||||||||||||||||| Sbjct: 1027250 tcgtcgccgcgagcgcggcg 1027231
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgcgag 535 |||| ||||||||||||||||||| Sbjct: 19579120 cgccatcaccgtcgtcgccgcgag 19579097
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ctcggcctcccgctccacct 402 |||||||||||||||||||| Sbjct: 864749 ctcggcctcccgctccacct 864730
>gb|AC068790.36| Homo sapiens 12 BAC RP11-214K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198537 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gcacacaattcatacaaaaa 21 |||||||||||||||||||| Sbjct: 20488 gcacacaattcatacaaaaa 20507
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gccacggctcgggcagctcc 363 |||||||||||||||||||| Sbjct: 5397184 gccacggctcgggcagctcc 5397165
>gb|AC007649.12| Homo sapiens 12 BAC RPCI11-90N16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168623 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 581 ggacgccattgatgtttctgtgga 604 |||| ||||||||||||||||||| Sbjct: 144846 ggaccccattgatgtttctgtgga 144869
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ctcggcctcccgctccacct 402 |||||||||||||||||||| Sbjct: 160296 ctcggcctcccgctccacct 160277
>gb|AE005008.1| Halobacterium sp. NRC-1 section 39 of 170 of the complete genome Length = 10325 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 ccgtcaccgtcgtcgccgcgagcg 537 |||||| ||||||||||||||||| Sbjct: 8039 ccgtcatcgtcgtcgccgcgagcg 8016
>emb|Z70724.1|SLORF1TO5 S.lividans genes for ORF1, ORF2, ORF3, ORF4 and ORF5 Length = 5424 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 511 acgccgtcaccgtcgtcgccgcga 534 ||||||||||||||| |||||||| Sbjct: 5399 acgccgtcaccgtcggcgccgcga 5376
>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0042B03 Length = 167669 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 cgccgtcaccgtcgtcgccgcgag 535 |||| ||||||||||||||||||| Sbjct: 54680 cgccatcaccgtcgtcgccgcgag 54657
>emb|X65556.1|SLGLYUB S.lividans tRNA-GlyU beta gene Length = 2576 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 cgccgcgagcgcggcgcaca 546 |||||||||||||||||||| Sbjct: 2060 cgccgcgagcgcggcgcaca 2041
>dbj|AK067473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107I12, full insert sequence Length = 1472 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ctcggcctcccgctccacct 402 |||||||||||||||||||| Sbjct: 465 ctcggcctcccgctccacct 484
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 cgtcgccgcgagcgcggcgc 543 |||||||||||||||||||| Sbjct: 2562007 cgtcgccgcgagcgcggcgc 2561988
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 558 acgagcgcggcggcgagcttcacg 581 |||||||||| ||||||||||||| Sbjct: 1694946 acgagcgcggtggcgagcttcacg 1694969 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 cgcgagcgcggcgcacacggcgac 553 |||||||||||||||| ||||||| Sbjct: 772709 cgcgagcgcggcgcacgcggcgac 772732 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 tcgtcgccgcgagcgcggcg 542 |||||||||||||||||||| Sbjct: 340932 tcgtcgccgcgagcgcggcg 340951
>gb|DQ144715.1| Bifidobacterium adolescentis DnaJ2 (dnaJ2) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cgacaagaacgagcgcggcg 569 |||||||||||||||||||| Sbjct: 290 cgacaagaacgagcgcggcg 309 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,840,970 Number of Sequences: 3902068 Number of extensions: 4840970 Number of successful extensions: 95571 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91867 Number of HSP's gapped (non-prelim): 3704 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
