ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3d14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31... 1061 0.0
2dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds 672 0.0
3emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMW... 603 e-169
4dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 1e-85
5dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 1e-85
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
7dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
8dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
9gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) 228 2e-56
10gb|AY111861.1| Zea mays CL2457_1 mRNA sequence 220 4e-54
11gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence 208 2e-50
12emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein 155 2e-34
13gb|AY108263.1| Zea mays PCO100700 mRNA sequence 125 2e-25
14emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31... 72 2e-09
15ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
16ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
17ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group... 66 1e-07
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
19dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
20dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
21dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
22dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
23dbj|AP006466.1| Balaenoptera bonaerensis mitochondrial DNA, comp... 46 0.13
24ref|NM_118610.2| Arabidopsis thaliana RBP31 (31-KDA RNA BINDING ... 44 0.52
25ref|NM_193093.2| Oryza sativa (japonica cultivar-group), mRNA 44 0.52
26ref|XM_384017.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 44 0.52
27emb|X65255.1|ATRNPT A.thaliana mRNA for RNA-binding protein (RNP-T) 44 0.52
28gb|AY143865.1| Arabidopsis thaliana At4g24770/F22K18_30 mRNA, co... 44 0.52
29emb|X61108.1|ATRNPDG A.thaliana rnpD gene for RNA binding protein 44 0.52
30emb|X57955.1|SORBP28 S.oleracea mRNA for a 28kD RNA binding prot... 44 0.52
31emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, ... 44 0.52
32emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, B... 44 0.52
33emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC... 44 0.52
34gb|AF410318.1|AF410318 Arabidopsis thaliana AT4g24770/F22K18_30 ... 44 0.52
35dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
36emb|BX826929.1|CNS0A47C Arabidopsis thaliana Full-length cDNA Co... 44 0.52
37gb|AC092682.2| Homo sapiens BAC clone RP11-734C21 from 2, comple... 44 0.52
38gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, com... 44 0.52
39dbj|D31713.1|ATHCP31D Arabidopsis thaliana mRNA for chloroplast ... 44 0.52
40dbj|D31712.1|ATHCP31C Arabidopsis thaliana gene for chloroplast ... 44 0.52
41emb|X63157.1|AT5DBINDN A.thaliana mRNA (5'region) for DNA bindin... 44 0.52
42dbj|AK061072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
43dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
44gb|M94554.1|ATHRNABPA Arabidopsis thaliana 31-kDa RNA binding pr... 44 0.52
45gb|U08467.1|ATU08467 Arabidopsis thaliana chloroplast RNA-bindin... 44 0.52
46gb|AC124518.4| Mus musculus BAC clone RP23-392E7 from chromosome... 42 2.1
47gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome... 42 2.1
48emb|AJ421780.1|PAM421780 Persea americana chloroplast mRNA for R... 42 2.1
49gb|AC117397.2| Homo sapiens 3 BAC RP11-92D20 (Roswell Park Cance... 42 2.1
50gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Can... 42 2.1
51ref|XM_628275.1| Cryptosporidium parvum Iowa II hypothetical pro... 42 2.1
52gb|AC027281.10| Homo sapiens chromosome 16 clone RP11-424M24, co... 42 2.1
53gb|AC141633.4| Mus musculus BAC clone RP24-155I4 from chromosome... 42 2.1
54gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, comp... 42 2.1
55emb|CT010474.12| Mouse DNA sequence from clone RP23-199B14 on ch... 42 2.1
56emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chr... 42 2.1
57ref|NM_124404.2| Arabidopsis thaliana RNA binding / nucleic acid... 40 8.2
58gb|AC168269.3| Mus musculus BAC clone RP23-193M17 from chromosom... 40 8.2
59gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 8.2
60gb|AC159319.2| Mus musculus BAC clone RP23-37C8 from chromosome ... 40 8.2
61gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete... 40 8.2
62gb|AY625727.1| Vanmanenia pingchowensis cytochrome b (cytb) gene... 40 8.2
63gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.2
64gb|AC125082.3| Mus musculus BAC clone RP24-90M24 from chromosome... 40 8.2
65gb|DQ105219.1| Vanmanenia pingchowensis haplotype 2 cytochrome b... 40 8.2
66gb|AC123069.4| Mus musculus BAC clone RP23-23B21 from 9, complet... 40 8.2
67gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete... 40 8.2
68emb|AL596178.4| Human DNA sequence from clone RP11-236L13 on chr... 40 8.2
69ref|XM_501558.1| Yarrowia lipolytica CLIB122, YALI0C07502g predi... 40 8.2
70gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 ma... 40 8.2
71gb|AC113615.3| Homo sapiens BAC clone RP11-586D19 from 4, comple... 40 8.2
72emb|AJ617306.1| Yarrowia lipolytica MATA locus, containing sla2 ... 40 8.2
73emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chr... 40 8.2
74emb|BX511115.14| Zebrafish DNA sequence from clone CH211-101B18 ... 40 8.2
75dbj|AB063332.1| Delftia acidovorans plasmid pUO1 DNA, complete s... 40 8.2
76dbj|AB049198.1| Delftia acidovorans plasmid pUO1 transposon TnHa... 40 8.2
77gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genom... 40 8.2
78gb|AY077660.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA, com... 40 8.2
79gb|AC098567.4| Genomic sequence for Mus musculus, clone RP23-198... 40 8.2
80gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.2
81gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.2
82gb|AY039868.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA, com... 40 8.2
83dbj|AK083275.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 8.2
84gb|AC148703.1| Macaca mulatta Major Histocompatibility Complex B... 40 8.2
85gb|AC148691.1| Macaca mulatta Major Histocompatibility Complex B... 40 8.2
86ref|XM_624098.1| PREDICTED: Apis mellifera similar to ENSANGP000... 40 8.2
87dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
88dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 8.2
89gb|AC008135.12|AC008135 Drosophila melanogaster, chromosome 3R, ... 40 8.2
90gb|AC067957.7| Homo sapiens BAC clone RP11-82K13 from 2, complet... 40 8.2
91gb|AC018552.6| Homo sapiens chromosome 16 clone RP11-405F3, comp... 40 8.2
92emb|BX511205.2|RN120J22 Rattus norvegicus chromosome 1 BAC RP32-... 40 8.2
93dbj|AB024031.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.2
94ref|NM_211458.1| Eremothecium gossypii AGL271Wp (AGL271W), mRNA 40 8.2
95ref|NM_208613.1| Eremothecium gossypii ACL144Cp (ACL144C), mRNA 40 8.2
96gb|U65409.1|YLU65409 Yarrowia lipolytica actin binding protein S... 40 8.2
97gb|AE003760.3| Drosophila melanogaster chromosome 3R, section 98... 40 8.2
98gb|AC005274.1|AC005274 Homo sapiens chromosome 17, clone hRPK.10... 40 8.2
99gb|U77121.1|FSU77121 Fundulus sciadicus cytochrome b (cytb) gene... 40 8.2
100gb|AF012788.1|AF012788 Channa pleurophthalma PLE1 cytochrome b (... 40 8.2
101emb|AL929072.8| Zebrafish DNA sequence from clone CH211-140B8, c... 40 8.2
102emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.2
103dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 8.2
104emb|AL929571.10| Mouse DNA sequence from clone RP23-313G3 on chr... 40 8.2
105emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chr... 40 8.2 
>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein
          Length = 1318

 Score = 1061 bits (535), Expect = 0.0
 Identities = 588/601 (97%), Gaps = 4/601 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    cttttgaattgcatacgacagnattgtgaacatggnaagcaacaggcagatagcaaaaga 60
            |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 1242 cttttgaattgcat-cgacag-attgtgaacatgg-aagcaacaggcagatagcaaaaga 1186

                                                                        
Query: 61   gaaaaacaaggtagagagaggagacatgcatggcacaaggatggatgggaggatgatgat 120
            ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1185 gaaaaacaagg-agagagaggagacttgcatggcacaaggatggatgggaggatgatgat 1127

                                                                        
Query: 121  gggatctaagccggtatcgggcgtgctatcgtgtctcttacgcagcaatcttgtcgtggt 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 1126 gggatctaagccggtatcgggcgtgctatcgtgtctcttacgcagcaatcttgtcgtatt 1067

                                                                        
Query: 181  gcaccgccaaatataccttcattagaacctccgcggtggccgctcctccgcgacgttgac 240
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1066 gcaccgccaaatataccttcattagaacctcctcggtggccgctcctccgcgacgttgac 1007

                                                                        
Query: 241  ccttagggcacgcccctncnagctctgtccatcgagggcagcgatggcgtcatccagttc 300
            ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 ccttagggcacgcccctccaagctctgtccatcgagggcagcgatggcgtcatccagttc 947

                                                                        
Query: 301  ctcctgcgacgccattgtcacgaaaccgaagcctcgtgagcgcccagtgtctctgtcgta 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946  ctcctgcgacgccattgtcacgaaaccgaagcctcgtgagcgcccagtgtctctgtcgta 887

                                                                        
Query: 361  gacgaccctggcatcgaccactttgccatgctcactgaacagctccaccaacctagagtc 420
            ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 886  gacgaccttggcatcgaccactttgccatgctcgctgaacagctccaccaacctagagtc 827

                                                                        
Query: 421  gtccacttgccatggcaggttgcccacatagatcctgaatgaagacccggaatcacgggg 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826  gtccacttgccatggcaggttgcccacatagatcctgaatgaagacccggaatcacgggg 767

                                                                        
Query: 481  aggcctttccacccgggcgcctctaggagctgccttgtttacagtcaacagcctcccatt 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766  aggcctttccacccgggcgcctctaggagctgccttgtttacagtcaacagcctcccatt 707

                                                                        
Query: 541  cacatcgtagcgatggaacatctctacagccttctcagccttctcaatggtactcatggt 600
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 706  cacatcgtagcgatggaacatctctacagccttctcagcctcctcaatggtactcatggt 647

             
Query: 601  g 601
            |
Sbjct: 646  g 646
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>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds
          Length = 1161

 Score =  672 bits (339), Expect = 0.0
 Identities = 442/477 (92%)
 Strand = Plus / Minus

                                                                       
Query: 125 tctaagccggtatcgggcgtgctatcgtgtctcttacgcagcaatcttgtcgtggtgcac 184
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 997 tctaagccggtattgggcgtgctatcgtgtctcttacgcagcaatcttgtcgtagtccac 938

                                                                       
Query: 185 cgccaaatataccttcattagaacctccgcggtggccgctcctccgcgacgttgaccctt 244
           |  |||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||  
Sbjct: 937 catcaaatacaccttcattagaacctccgtggtggccgctcctccgcaacgttcacccgc 878

                                                                       
Query: 245 agggcacgcccctncnagctctgtccatcgagggcagcgatggcgtcatccagttcctcc 304
           || |||||||||| | |||||||||||||||||||||||||||| ||||| ||||||  |
Sbjct: 877 agagcacgcccctccaagctctgtccatcgagggcagcgatggcatcatcaagttccggc 818

                                                                       
Query: 305 tgcgacgccattgtcacgaaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacg 364
           || || ||||||||||||||||| || || ||||||||||||||||||||||||||||| 
Sbjct: 817 tgtgatgccattgtcacgaaaccaaatccccgtgagcgcccagtgtctctgtcgtagaca 758

                                                                       
Query: 365 accctggcatcgaccactttgccatgctcactgaacagctccaccaacctagagtcgtcc 424
           |||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 757 accctggcatcgacaactttgccgtgctcgctgaacagctctaccaacctagagtcgtcc 698

                                                                       
Query: 425 acttgccatggcaggttgcccacatagatcctgaatgaagacccggaatcacggggaggc 484
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 697 acttgccatggcaggttgcccacgtagatcctgaatgaagacccggaatcacggggaggc 638

                                                                       
Query: 485 ctttccacccgggcgcctctaggagctgccttgtttacagtcaacagcctcccattcaca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 637 ctttccacccgggcgcctctaggagctgccttgtttacagtcaacagcctcccgttcacg 578

                                                                    
Query: 545 tcgtagcgatggaacatctctacagccttctcagccttctcaatggtactcatggtg 601
           || ||||||||||||||||| || ||||||||||||| |||||||||||||||||||
Sbjct: 577 tcatagcgatggaacatctccacggccttctcagcctcctcaatggtactcatggtg 521



 Score =  105 bits (53), Expect = 2e-19
 Identities = 98/109 (89%), Gaps = 3/109 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    cttttgaattgcatacgacagnattgtgaacatggnaagcaacaggcagatagcaaaaga 60
            |||||||||||||| |||||| |||| |||| ||| ||||||||||||||||||||||||
Sbjct: 1106 cttttgaattgcat-cgacag-attgagaacgtgg-aagcaacaggcagatagcaaaaga 1050

                                                             
Query: 61   gaaaaacaaggtagagagaggagacatgcatggcacaaggatggatggg 109
            ||||||||  | ||||||||||| ||  |||||||||||||||||||||
Sbjct: 1049 gaaaaacactggagagagaggaggcagacatggcacaaggatggatggg 1001
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>emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMWG0781
          Length = 350

 Score =  603 bits (304), Expect = e-169
 Identities = 333/342 (97%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 153 gtctcttacgcagcaatcttgtcgtggtgcaccgccaaatataccttcattagaacctcc 212
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8   gtctcttacgcagcaatcttgtcgtagtgcaccgccaaatataccttcattagaacctcc 67

                                                                       
Query: 213 gcggtggccgctcctccgcgacgttgacccttagggcacgcccctncnagctctgtccat 272
            ||||||||||  |||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct: 68  tcggtggccgcgtctccgcgacgttgacccttagggcacgccc-tccaagctctgtccat 126

                                                                       
Query: 273 cgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagc 332
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagc 186

                                                                       
Query: 333 ctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgct 392
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctcgtgggcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgct 246

                                                                       
Query: 393 cactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgcccacataga 452
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cgctgaacagctccaccaacctagagtcgtccacttgccatggcaggttgcccacataga 306

                                                     
Query: 453 tcctgaatgaagacccggaatcacggggaggcctttccaccc 494
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tcctgaatgaagacccggaatcacggggaggcctttccaccc 348
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>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full
           insert sequence
          Length = 1196

 Score =  325 bits (164), Expect = 1e-85
 Identities = 333/390 (85%)
 Strand = Plus / Minus

                                                                       
Query: 212 cgcggtggccgctcctccgcgacgttgacccttagggcacgcccctncnagctctgtcca 271
           |||||||| |||||||| || || || || || || ||||| || | | | |||||||||
Sbjct: 982 cgcggtggtcgctcctctgcaacattcactctcagcgcacggccatccaaactctgtcca 923

                                                                       
Query: 272 tcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaag 331
           |||||||| || || ||||| |||| ||| ||||| | ||||||||| || ||||| || 
Sbjct: 922 tcgagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaaaccaaat 863

                                                                       
Query: 332 cctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgc 391
           |||||||| |||||||| |||||||| || || || ||||| ||||| ||||||||||||
Sbjct: 862 cctcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactactttgccatgc 803

                                                                       
Query: 392 tcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgcccacatag 451
           || ||||||||||  |||||||||||||| ||||||||||| || || ||||||||||| 
Sbjct: 802 tcgctgaacagctgtaccaacctagagtcatccacttgccaagggagattgcccacataa 743

                                                                       
Query: 452 atcctgaatgaagacccggaatcacggggaggcctttccacccgggcgcctctaggagct 511
           |||||||| |||| |||  | | ||||||||| ||||||||||| |||||||||||||||
Sbjct: 742 atcctgaaagaaggcccaaactgacggggaggtctttccacccgagcgcctctaggagct 683

                                                                       
Query: 512 gccttgtttacagtcaacagcctcccattcacatcgtagcgatggaacatctctacagcc 571
           ||||||||||||||||  ||||||||||  ||||||||||||||||||||||| ||||||
Sbjct: 682 gccttgtttacagtcagaagcctcccatcaacatcgtagcgatggaacatctccacagcc 623

                                         
Query: 572 ttctcagccttctcaatggtactcatggtg 601
           |||||||||| ||||| ||| |||||||||
Sbjct: 622 ttctcagcctcctcaacggtgctcatggtg 593
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>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full
           insert sequence
          Length = 1289

 Score =  325 bits (164), Expect = 1e-85
 Identities = 333/390 (85%)
 Strand = Plus / Minus

                                                                       
Query: 212 cgcggtggccgctcctccgcgacgttgacccttagggcacgcccctncnagctctgtcca 271
           |||||||| |||||||| || || || || || || ||||| || | | | |||||||||
Sbjct: 983 cgcggtggtcgctcctctgcaacattcactctcagcgcacggccatccaaactctgtcca 924

                                                                       
Query: 272 tcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaag 331
           |||||||| || || ||||| |||| ||| ||||| | ||||||||| || ||||| || 
Sbjct: 923 tcgagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaaaccaaat 864

                                                                       
Query: 332 cctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgc 391
           |||||||| |||||||| |||||||| || || || ||||| ||||| ||||||||||||
Sbjct: 863 cctcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactactttgccatgc 804

                                                                       
Query: 392 tcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgcccacatag 451
           || ||||||||||  |||||||||||||| ||||||||||| || || ||||||||||| 
Sbjct: 803 tcgctgaacagctgtaccaacctagagtcatccacttgccaagggagattgcccacataa 744

                                                                       
Query: 452 atcctgaatgaagacccggaatcacggggaggcctttccacccgggcgcctctaggagct 511
           |||||||| |||| |||  | | ||||||||| ||||||||||| |||||||||||||||
Sbjct: 743 atcctgaaagaaggcccaaactgacggggaggtctttccacccgagcgcctctaggagct 684

                                                                       
Query: 512 gccttgtttacagtcaacagcctcccattcacatcgtagcgatggaacatctctacagcc 571
           ||||||||||||||||  ||||||||||  ||||||||||||||||||||||| ||||||
Sbjct: 683 gccttgtttacagtcagaagcctcccatcaacatcgtagcgatggaacatctccacagcc 624

                                         
Query: 572 ttctcagccttctcaatggtactcatggtg 601
           |||||||||| ||||| ||| |||||||||
Sbjct: 623 ttctcagcctcctcaacggtgctcatggtg 594
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  244 bits (123), Expect = 3e-61
 Identities = 237/275 (86%)
 Strand = Plus / Plus

                                                                            
Query: 265      ctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaa 324
                ||||||||||||||| || || ||||| |||| ||| ||||| | ||||||||| || ||
Sbjct: 22204205 ctgtccatcgagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaa 22204264

                                                                            
Query: 325      accgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccacttt 384
                ||| || |||||||| |||||||| |||||||| || || || ||||| ||||| |||||
Sbjct: 22204265 accaaatcctcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactacttt 22204324

                                                                            
Query: 385      gccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgcc 444
                ||||||||| ||||||||||  |||||||||||||| ||||||||||| || || |||||
Sbjct: 22204325 gccatgctcgctgaacagctgtaccaacctagagtcatccacttgccaagggagattgcc 22204384

                                                                            
Query: 445      cacatagatcctgaatgaagacccggaatcacggggaggcctttccacccgggcgcctct 504
                |||||| |||||||| |||| |||  | | ||||||||| ||||||||||| ||||||||
Sbjct: 22204385 cacataaatcctgaaagaaggcccaaactgacggggaggtctttccacccgagcgcctct 22204444

                                                   
Query: 505      aggagctgccttgtttacagtcaacagcctcccat 539
                |||||||||||||||||||||||  ||||||||||
Sbjct: 22204445 aggagctgccttgtttacagtcagaagcctcccat 22204479



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 546      cgtagcgatggaacatctctacagccttctcagccttctcaatggtactcatggtg 601
                ||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||
Sbjct: 22205004 cgtagcgatggaacatctccacagccttctcagcctcctcaacggtgctcatggtg 22205059
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>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0070E11
          Length = 142855

 Score =  244 bits (123), Expect = 3e-61
 Identities = 237/275 (86%)
 Strand = Plus / Plus

                                                                         
Query: 265   ctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaa 324
             ||||||||||||||| || || ||||| |||| ||| ||||| | ||||||||| || ||
Sbjct: 24103 ctgtccatcgagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaa 24162

                                                                         
Query: 325   accgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccacttt 384
             ||| || |||||||| |||||||| |||||||| || || || ||||| ||||| |||||
Sbjct: 24163 accaaatcctcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactacttt 24222

                                                                         
Query: 385   gccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgcc 444
             ||||||||| ||||||||||  |||||||||||||| ||||||||||| || || |||||
Sbjct: 24223 gccatgctcgctgaacagctgtaccaacctagagtcatccacttgccaagggagattgcc 24282

                                                                         
Query: 445   cacatagatcctgaatgaagacccggaatcacggggaggcctttccacccgggcgcctct 504
             |||||| |||||||| |||| |||  | | ||||||||| ||||||||||| ||||||||
Sbjct: 24283 cacataaatcctgaaagaaggcccaaactgacggggaggtctttccacccgagcgcctct 24342

                                                
Query: 505   aggagctgccttgtttacagtcaacagcctcccat 539
             |||||||||||||||||||||||  ||||||||||
Sbjct: 24343 aggagctgccttgtttacagtcagaagcctcccat 24377



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                     
Query: 546   cgtagcgatggaacatctctacagccttctcagccttctcaatggtactcatggtg 601
             ||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||
Sbjct: 24902 cgtagcgatggaacatctccacagccttctcagcctcctcaacggtgctcatggtg 24957
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>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0042B15
          Length = 157981

 Score =  244 bits (123), Expect = 3e-61
 Identities = 237/275 (86%)
 Strand = Plus / Plus

                                                                          
Query: 265    ctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaa 324
              ||||||||||||||| || || ||||| |||| ||| ||||| | ||||||||| || ||
Sbjct: 125698 ctgtccatcgagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaa 125757

                                                                          
Query: 325    accgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccacttt 384
              ||| || |||||||| |||||||| |||||||| || || || ||||| ||||| |||||
Sbjct: 125758 accaaatcctcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactacttt 125817

                                                                          
Query: 385    gccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgcc 444
              ||||||||| ||||||||||  |||||||||||||| ||||||||||| || || |||||
Sbjct: 125818 gccatgctcgctgaacagctgtaccaacctagagtcatccacttgccaagggagattgcc 125877

                                                                          
Query: 445    cacatagatcctgaatgaagacccggaatcacggggaggcctttccacccgggcgcctct 504
              |||||| |||||||| |||| |||  | | ||||||||| ||||||||||| ||||||||
Sbjct: 125878 cacataaatcctgaaagaaggcccaaactgacggggaggtctttccacccgagcgcctct 125937

                                                 
Query: 505    aggagctgccttgtttacagtcaacagcctcccat 539
              |||||||||||||||||||||||  ||||||||||
Sbjct: 125938 aggagctgccttgtttacagtcagaagcctcccat 125972



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                      
Query: 546    cgtagcgatggaacatctctacagccttctcagccttctcaatggtactcatggtg 601
              ||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||
Sbjct: 126497 cgtagcgatggaacatctccacagccttctcagcctcctcaacggtgctcatggtg 126552
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>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP)
          Length = 1251

 Score =  228 bits (115), Expect = 2e-56
 Identities = 320/389 (82%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcattagaacctccgcggtggccgctcctccgcgacgttgacccttagggcacgcccctn 258
            ||||||||| |  ||| ||||||||||||| || || || ||||  | |||||| || | 
Sbjct: 1038 tcattagaaacctcgccgtggccgctcctctgcaacattcacccgcaaggcacggccatc 979

                                                                        
Query: 259  cnagctctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgt 318
            | | ||||||||||| |||||||| || || ||||||| ||| |||||||| ||||| ||
Sbjct: 978  caaactctgtccatcaagggcagcaatagcatcatccaattcgtcctgcgatgccatagt 919

                                                                        
Query: 319  cacgaaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgac 378
             || ||||| || || ||||| |||||||| |||| ||| ||||| || |||||||| ||
Sbjct: 918  aacaaaaccaaatccccgtgaacgcccagtttctcggtcatagacaactctggcatcaac 859

                                                                        
Query: 379  cactttgccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcag 438
             ||||| |||||||| ||||||| ||||||||| ||||| || ||||||||||| |||||
Sbjct: 858  tactttaccatgctcgctgaacaactccaccaatctagaatcatccacttgccaaggcag 799

                                                                        
Query: 439  gttgcccacatagatcctgaatgaagacccggaatcacggggaggcctttccacccgggc 498
            |||||| ||||| || ||||  |||| ||| || |  | |||||| || ||||| || | 
Sbjct: 798  gttgccaacataaattctgagagaaggcccagattgtctgggaggtctgtccacacgaga 739

                                                                        
Query: 499  gcctctaggagctgccttgtttacagtcaacagcctcccattcacatcgtagcgatggaa 558
            ||||||||||||||| || ||||||||||  ||||| ||||| ||||| |||||||||||
Sbjct: 738  gcctctaggagctgctttatttacagtcagaagccttccattgacatcatagcgatggaa 679

                                         
Query: 559  catctctacagccttctcagccttctcaa 587
            |||||| |||||||||||||||| |||||
Sbjct: 678  catctccacagccttctcagcctcctcaa 650
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>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence
          Length = 1273

 Score =  220 bits (111), Expect = 4e-54
 Identities = 319/389 (82%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcattagaacctccgcggtggccgctcctccgcgacgttgacccttagggcacgcccctn 258
            ||||||||| |  ||| ||||||||||||| || || || ||||  | |||||| || | 
Sbjct: 1038 tcattagaaacctcgccgtggccgctcctctgcaacattcacccgcaaggcacggccatc 979

                                                                        
Query: 259  cnagctctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgt 318
            | | ||||||||||| |||||||| || || ||||||| ||| |||||||| ||||| ||
Sbjct: 978  caaactctgtccatcaagggcagcaatagcatcatccaattcgtcctgcgatgccatagt 919

                                                                        
Query: 319  cacgaaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgac 378
             || ||||| || || || || |||||||| |||| ||| ||||| || |||||||| ||
Sbjct: 918  aacaaaaccaaatccccgcgaacgcccagtttctcggtcatagacaactctggcatcaac 859

                                                                        
Query: 379  cactttgccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcag 438
             ||||| |||||||| ||||||| ||||||||| ||||| || ||||||||||| |||||
Sbjct: 858  tactttaccatgctcgctgaacaactccaccaatctagaatcatccacttgccaaggcag 799

                                                                        
Query: 439  gttgcccacatagatcctgaatgaagacccggaatcacggggaggcctttccacccgggc 498
            |||||| ||||| || ||||  |||| ||| || |  | |||||| || ||||| || | 
Sbjct: 798  gttgccaacataaattctgagagaaggcccagattgtctgggaggtctgtccacacgaga 739

                                                                        
Query: 499  gcctctaggagctgccttgtttacagtcaacagcctcccattcacatcgtagcgatggaa 558
            ||||||||||||||| || ||||||||||  ||||| ||||| ||||| |||||||||||
Sbjct: 738  gcctctaggagctgctttatttacagtcagaagccttccattgacatcatagcgatggaa 679

                                         
Query: 559  catctctacagccttctcagccttctcaa 587
            |||||| |||||||||||||||| |||||
Sbjct: 678  catctccacagccttctcagcctcctcaa 650
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>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence
          Length = 1108

 Score =  208 bits (105), Expect = 2e-50
 Identities = 270/325 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 ctctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacg 322
           ||||||||||| |||||||| || || ||||||| ||| |||||||| ||||| || || 
Sbjct: 244 ctctgtccatcaagggcagcaatagcatcatccaattcgtcctgcgatgccatagtaaca 303

                                                                       
Query: 323 aaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccact 382
           ||||| || || ||||| | |||||| |||| ||| ||||| || |||||||| || |||
Sbjct: 304 aaaccaaatccccgtgaacccccagtttctccgtcatagacaactctggcatcaactact 363

                                                                       
Query: 383 ttgccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttg 442
           || |||||||| ||||||| | ||||||| ||||| || ||||||||||| |||||||||
Sbjct: 364 ttaccatgctcgctgaacaaccccaccaatctagaatcatccacttgccaaggcaggttg 423

                                                                       
Query: 443 cccacatagatcctgaatgaagacccggaatcacggggaggcctttccacccgggcgcct 502
           || ||||| || ||||  |||| ||| || |  | |||||| || ||||| || | ||||
Sbjct: 424 ccaacataaattctgagagaaggcccagattgtctgggaggtctgtccacacgagagcct 483

                                                                       
Query: 503 ctaggagctgccttgtttacagtcaacagcctcccattcacatcgtagcgatggaacatc 562
           ||||||||||| || ||||||||||  ||||| ||||| ||||| |||||||||||||||
Sbjct: 484 ctaggagctgctttatttacagtcagaagccttccattgacatcatagcgatggaacatc 543

                                    
Query: 563 tctacagccttctcagccttctcaa 587
           || |||||||||||||||| |||||
Sbjct: 544 tccacagccttctcagcctcctcaa 568
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>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein
          Length = 3176

 Score =  155 bits (78), Expect = 2e-34
 Identities = 231/282 (81%)
 Strand = Plus / Minus

                                                                        
Query: 265  ctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaa 324
            ||||||||| |||||||| || || ||||||| ||| |||||||| ||||| || || ||
Sbjct: 2461 ctgtccatcaagggcagcaatagcatcatccaattcgtcctgcgatgccatagtaacaaa 2402

                                                                        
Query: 325  accgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccacttt 384
            ||| || || || || |||||||| |||| ||| ||||| || |||||||| || |||||
Sbjct: 2401 accaaatccccgcgaacgcccagtttctcggtcatagacaactctggcatcaactacttt 2342

                                                                        
Query: 385  gccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgcc 444
             |||||||| ||||||| ||||||||| ||||| || ||||||||||| |||||||||||
Sbjct: 2341 accatgctcgctgaacaactccaccaatctagaatcatccacttgccaaggcaggttgcc 2282

                                                                        
Query: 445  cacatagatcctgaatgaagacccggaatcacggggaggcctttccacccgggcgcctct 504
             ||||| || ||||  |||| ||| || |  | |||||| || ||||| || | ||||||
Sbjct: 2281 aacataaattctgagagaaggcccagattgtctgggaggtctgtccacacgagagcctct 2222

                                                      
Query: 505  aggagctgccttgtttacagtcaacagcctcccattcacatc 546
            ||||||||| || ||||||||||  ||||| ||||| |||||
Sbjct: 2221 aggagctgctttatttacagtcagaagccttccattgacatc 2180



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 550  gcgatggaacatctctacagccttctcagccttctcaa 587
            ||||||||||||||| |||||||||||||||| |||||
Sbjct: 1294 gcgatggaacatctccacagccttctcagcctcctcaa 1257
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>gb|AY108263.1| Zea mays PCO100700 mRNA sequence
          Length = 891

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                       
Query: 296 agttcctcctgcgacgccattgtcacgaaaccgaagcctcgtgagcgcccagtgtctctg 355
           ||||||||||  ||| ||||||  || |||||||| ||||||||||||||||| ||||||
Sbjct: 517 agttcctcctttgacaccattgatacaaaaccgaatcctcgtgagcgcccagtttctctg 458

                                                                       
Query: 356 tcgtagacgaccctggcatcgaccactttgccatgctcactgaacagctccaccaaccta 415
           |||||||| ||| | ||||| || ||||  |||||||| ||||||| || ||||| ||||
Sbjct: 457 tcgtagacaaccttagcatcaacaacttctccatgctcgctgaacaactgcaccagccta 398

                                              
Query: 416 gagtcgtccacttgccatggcaggttgcccacata 450
           ||||| || ||||||||||||| |||||| |||||
Sbjct: 397 gagtcatcaacttgccatggcaagttgccaacata 363
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>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein
          Length = 1139

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 105/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 323 aaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccact 382
           ||||| || ||||| || |||||||| |||||||| || |||| | | ||||  || |||
Sbjct: 794 aaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactact 735

                                                                       
Query: 383 ttgccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttg 442
           |  |||||||| |||||||  | ||||||||||||||| ||| |||||||||||||||| 
Sbjct: 734 tccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggtta 675

                   
Query: 443 cccacata 450
           || |||||
Sbjct: 674 ccaacata 667
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>ref|XM_483744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 927

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 386 ccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgccc 445
           |||||||| |||||||  | || || ||||||||| ||||||||||||||||||||||| 
Sbjct: 423 ccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgcca 364

                
Query: 446 acata 450
           |||||
Sbjct: 363 acata 359
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>ref|XM_483743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1233

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 386 ccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgccc 445
           |||||||| |||||||  | || || ||||||||| ||||||||||||||||||||||| 
Sbjct: 804 ccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgcca 745

                
Query: 446 acata 450
           |||||
Sbjct: 744 acata 740
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>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2
           mRNA
          Length = 1302

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 386 ccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgccc 445
           |||||||| |||||||  | || || ||||||||| ||||||||||||||||||||||| 
Sbjct: 798 ccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgcca 739

                
Query: 446 acata 450
           |||||
Sbjct: 738 acata 734
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                            
Query: 386      ccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgccc 445
                |||||||| |||||||  | || || ||||||||| ||||||||||||||||||||||| 
Sbjct: 27873670 ccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgcca 27873729

                     
Query: 446      acata 450
                |||||
Sbjct: 27873730 acata 27873734
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>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                         
Query: 386   ccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgccc 445
             |||||||| |||||||  | || || ||||||||| ||||||||||||||||||||||| 
Sbjct: 81748 ccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgcca 81807

                  
Query: 446   acata 450
             |||||
Sbjct: 81808 acata 81812
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>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full
           insert sequence
          Length = 1230

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 386 ccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgccc 445
           |||||||| |||||||  | || || ||||||||| ||||||||||||||||||||||| 
Sbjct: 801 ccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgcca 742

                
Query: 446 acata 450
           |||||
Sbjct: 741 acata 737
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>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full
           insert sequence
          Length = 927

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 386 ccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgccc 445
           |||||||| |||||||  | || || ||||||||| ||||||||||||||||||||||| 
Sbjct: 423 ccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgcca 364

                
Query: 446 acata 450
           |||||
Sbjct: 363 acata 359
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>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full
           insert sequence
          Length = 1302

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 386 ccatgctcactgaacagctccaccaacctagagtcgtccacttgccatggcaggttgccc 445
           |||||||| |||||||  | || || ||||||||| ||||||||||||||||||||||| 
Sbjct: 798 ccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgcca 739

                
Query: 446 acata 450
           |||||
Sbjct: 738 acata 734
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>dbj|AP006466.1| Balaenoptera bonaerensis mitochondrial DNA, complete genome
          Length = 16421

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 98   aggatggatgggaggatgatgat 120
            |||||||||||||||||||||||
Sbjct: 8066 aggatggatgggaggatgatgat 8044
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>ref|NM_118610.2| Arabidopsis thaliana RBP31 (31-KDA RNA BINDING PROTEIN); RNA
           binding AT4G24770 (RBP31) mRNA, complete cds
          Length = 1254

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 500 cctctaggagctgccttgtttacagt 525
           ||||| ||||||||||||||||||||
Sbjct: 760 cctcttggagctgccttgtttacagt 735



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 tctgtccatcgagggcagcgatggc 288
           |||||||||||||||||| ||||||
Sbjct: 996 tctgtccatcgagggcagagatggc 972
to top
>ref|NM_193093.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1053

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 353 ctgtcgtagacgaccctggcatcgaccactttgccatgctcactgaacag 402
           |||||||||| |||| ||||||||| |||  | || ||||||||||||||
Sbjct: 708 ctgtcgtagatgaccttggcatcgagcacggttccctgctcactgaacag 659
to top
>ref|XM_384017.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03841.1)
           partial mRNA
          Length = 3492

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 320 acgaaaccgaagcctcgtgagcgcccagtgtctc 353
           |||||||||||||||| |||||| ||||| ||||
Sbjct: 146 acgaaaccgaagcctcttgagcgaccagtatctc 113
to top
>emb|X65255.1|ATRNPT A.thaliana mRNA for RNA-binding protein (RNP-T)
          Length = 1148

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 500 cctctaggagctgccttgtttacagt 525
           ||||| ||||||||||||||||||||
Sbjct: 740 cctcttggagctgccttgtttacagt 715



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 tctgtccatcgagggcagcgatggc 288
           |||||||||||||||||| ||||||
Sbjct: 976 tctgtccatcgagggcagagatggc 952
to top
>gb|AY143865.1| Arabidopsis thaliana At4g24770/F22K18_30 mRNA, complete cds
          Length = 990

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 500 cctctaggagctgccttgtttacagt 525
           ||||| ||||||||||||||||||||
Sbjct: 689 cctcttggagctgccttgtttacagt 664



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 tctgtccatcgagggcagcgatggc 288
           |||||||||||||||||| ||||||
Sbjct: 925 tctgtccatcgagggcagagatggc 901
to top
>emb|X61108.1|ATRNPDG A.thaliana rnpD gene for RNA binding protein
          Length = 1090

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 500 cctctaggagctgccttgtttacagt 525
           ||||| ||||||||||||||||||||
Sbjct: 632 cctcttggagctgccttgtttacagt 607



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 tctgtccatcgagggcagcgatggc 288
           |||||||||||||||||| ||||||
Sbjct: 868 tctgtccatcgagggcagagatggc 844
to top
>emb|X57955.1|SORBP28 S.oleracea mRNA for a 28kD RNA binding protein, involved in plastid
           mRNA 3' processing
          Length = 1009

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 264 tctgtccatcgagggcagcgatggcgtcat 293
           ||||||||||||| ||||| ||||||||||
Sbjct: 619 tctgtccatcgagagcagcaatggcgtcat 590
to top
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62
          Length = 197070

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 500   cctctaggagctgccttgtttacagt 525
             ||||| ||||||||||||||||||||
Sbjct: 40927 cctcttggagctgccttgtttacagt 40952



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 265   ctgtccatcgagggcagcgatggc 288
             ||||||||||||||||| ||||||
Sbjct: 40692 ctgtccatcgagggcagagatggc 40715
to top
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone  F22K18 (ESSAII
             project)
          Length = 125803

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 500   cctctaggagctgccttgtttacagt 525
             ||||| ||||||||||||||||||||
Sbjct: 14581 cctcttggagctgccttgtttacagt 14556



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   ctgtccatcgagggcagcgatggc 288
             ||||||||||||||||| ||||||
Sbjct: 14816 ctgtccatcgagggcagagatggc 14793
to top
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone  F6I7 (ESSA project)
          Length = 95185

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 500   cctctaggagctgccttgtttacagt 525
             ||||| ||||||||||||||||||||
Sbjct: 11503 cctcttggagctgccttgtttacagt 11528



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 265   ctgtccatcgagggcagcgatggc 288
             ||||||||||||||||| ||||||
Sbjct: 11268 ctgtccatcgagggcagagatggc 11291
to top
>gb|AF410318.1|AF410318 Arabidopsis thaliana AT4g24770/F22K18_30 mRNA, complete cds
          Length = 1171

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 500 cctctaggagctgccttgtttacagt 525
           ||||| ||||||||||||||||||||
Sbjct: 745 cctcttggagctgccttgtttacagt 720



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 tctgtccatcgagggcagcgatggc 288
           |||||||||||||||||| ||||||
Sbjct: 981 tctgtccatcgagggcagagatggc 957
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 353      ctgtcgtagacgaccctggcatcgaccactttgccatgctcactgaacag 402
                |||||||||| |||| ||||||||| |||  | || ||||||||||||||
Sbjct: 26159762 ctgtcgtagatgaccttggcatcgagcacggttccctgctcactgaacag 26159713
to top
>emb|BX826929.1|CNS0A47C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB77ZD03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1170

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 500 cctctaggagctgccttgtttacagt 525
           ||||| ||||||||||||||||||||
Sbjct: 764 cctcttggagctgccttgtttacagt 739
to top
>gb|AC092682.2| Homo sapiens BAC clone RP11-734C21 from 2, complete sequence
          Length = 188920

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 55     aaaagagaaaaacaaggtagag 76
              ||||||||||||||||||||||
Sbjct: 100793 aaaagagaaaaacaaggtagag 100772
to top
>gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, complete sequence
          Length = 197439

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 47    cagatagcaaaagagaaaaacaaggt 72
             |||||||||||||| |||||||||||
Sbjct: 83143 cagatagcaaaagacaaaaacaaggt 83118
to top
>dbj|D31713.1|ATHCP31D Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp31,
           partial cds
          Length = 1035

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 500 cctctaggagctgccttgtttacagt 525
           ||||| ||||||||||||||||||||
Sbjct: 614 cctcttggagctgccttgtttacagt 589



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 tctgtccatcgagggcagcgatggc 288
           |||||||||||||||||| ||||||
Sbjct: 850 tctgtccatcgagggcagagatggc 826
to top
>dbj|D31712.1|ATHCP31C Arabidopsis thaliana gene for chloroplast RNA-binding protein cp31,
            complete cds (exon1, exon2, exon3, exon4)
          Length = 4135

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 500  cctctaggagctgccttgtttacagt 525
            ||||| ||||||||||||||||||||
Sbjct: 2715 cctcttggagctgccttgtttacagt 2690



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 265  ctgtccatcgagggcagcgatggc 288
            ||||||||||||||||| ||||||
Sbjct: 2950 ctgtccatcgagggcagagatggc 2927
to top
>emb|X63157.1|AT5DBINDN A.thaliana mRNA (5'region) for DNA binding protein homologous to
           nucleolin
          Length = 872

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 500 cctctaggagctgccttgtttacagt 525
           ||||| ||||||||||||||||||||
Sbjct: 449 cctcttggagctgccttgtttacagt 424



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 tctgtccatcgagggcagcgatggc 288
           |||||||||||||||||| ||||||
Sbjct: 685 tctgtccatcgagggcagagatggc 661
to top
>dbj|AK061072.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D01, full
           insert sequence
          Length = 1052

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 353 ctgtcgtagacgaccctggcatcgaccactttgccatgctcactgaacag 402
           |||||||||| |||| ||||||||| |||  | || ||||||||||||||
Sbjct: 708 ctgtcgtagatgaccttggcatcgagcacggttccctgctcactgaacag 659
to top
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 353   ctgtcgtagacgaccctggcatcgaccactttgccatgctcactgaacag 402
             |||||||||| |||| ||||||||| |||  | || ||||||||||||||
Sbjct: 51620 ctgtcgtagatgaccttggcatcgagcacggttccctgctcactgaacag 51571
to top
>gb|M94554.1|ATHRNABPA Arabidopsis thaliana 31-kDa RNA binding protein (rbp31) mRNA,
           complete cds
          Length = 1179

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 500 cctctaggagctgccttgtttacagt 525
           ||||| ||||||||||||||||||||
Sbjct: 728 cctcttggagctgccttgtttacagt 703



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 tctgtccatcgagggcagcgatggc 288
           |||||||||||||||||| ||||||
Sbjct: 964 tctgtccatcgagggcagagatggc 940
to top
>gb|U08467.1|ATU08467 Arabidopsis thaliana chloroplast RNA-binding proteins 1, 2, and 3
            gene, complete cds
          Length = 2716

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 500  cctctaggagctgccttgtttacagt 525
            ||||| ||||||||||||||||||||
Sbjct: 1895 cctcttggagctgccttgtttacagt 1870



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 265  ctgtccatcgagggcagcgatggc 288
            ||||||||||||||||| ||||||
Sbjct: 2130 ctgtccatcgagggcagagatggc 2107
to top
>gb|AC124518.4| Mus musculus BAC clone RP23-392E7 from chromosome 18, complete sequence
          Length = 222376

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     atagcaaaagagaaaaacaag 70
              |||||||||||||||||||||
Sbjct: 199702 atagcaaaagagaaaaacaag 199682
to top
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence
          Length = 190772

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 69     aggtagagagaggagacatgc 89
              |||||||||||||||||||||
Sbjct: 102548 aggtagagagaggagacatgc 102568
to top
>emb|AJ421780.1|PAM421780 Persea americana chloroplast mRNA for RNA-binding protein precursor
           (rbp33 gene)
          Length = 1253

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 488 tccacccgggcgcctctaggagctgccttgtttacagtcaacagcctcccatt 540
           ||||| ||||| ||||| || ||||| || ||||||||||| ||||| |||||
Sbjct: 681 tccactcgggcccctcttggggctgctttatttacagtcaaaagccttccatt 629
to top
>gb|AC117397.2| Homo sapiens 3 BAC RP11-92D20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128398

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 442   gcccacatagatcctgaatga 462
             |||||||||||||||||||||
Sbjct: 19360 gcccacatagatcctgaatga 19340
to top
>gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 217249

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 565    tacagccttctcagccttctc 585
              |||||||||||||||||||||
Sbjct: 115045 tacagccttctcagccttctc 115065
to top
>ref|XM_628275.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd7_890),
           partial mRNA
          Length = 2232

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 567 cagccttctcagccttctcaa 587
           |||||||||||||||||||||
Sbjct: 931 cagccttctcagccttctcaa 951



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 567 cagccttctcagccttctca 586
           ||||||||||||||||||||
Sbjct: 967 cagccttctcagccttctca 986



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 567 cagccttctcagccttctca 586
           ||||||||||||||||||||
Sbjct: 958 cagccttctcagccttctca 977
to top
>gb|AC027281.10| Homo sapiens chromosome 16 clone RP11-424M24, complete sequence
          Length = 221210

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 99    ggatggatgggaggatgatgatggg 123
             ||||||||||| |||||||||||||
Sbjct: 99755 ggatggatgggtggatgatgatggg 99731
to top
>gb|AC141633.4| Mus musculus BAC clone RP24-155I4 from chromosome 18, complete sequence
          Length = 163886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 50     atagcaaaagagaaaaacaag 70
              |||||||||||||||||||||
Sbjct: 152908 atagcaaaagagaaaaacaag 152928
to top
>gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, complete sequence
          Length = 225977

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 98    aggatggatgggaggatgatg 118
             |||||||||||||||||||||
Sbjct: 44404 aggatggatgggaggatgatg 44424
to top
>emb|CT010474.12| Mouse DNA sequence from clone RP23-199B14 on chromosome 12, complete
             sequence
          Length = 205340

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 59    gagaaaaacaaggtagagagaggag 83
             |||| ||||||||||||||||||||
Sbjct: 79906 gagataaacaaggtagagagaggag 79930
to top
>emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chromosome 4, complete
             sequence
          Length = 100102

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 99    ggatggatgggaggatgatga 119
             |||||||||||||||||||||
Sbjct: 10393 ggatggatgggaggatgatga 10413
to top
>ref|NM_124404.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G50250
           mRNA, complete cds
          Length = 1071

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 500 cctctaggagctgccttgtttacagtcaacagcctcccattcac 543
           ||||| ||||||||  ||||||| |||||  |||||||||||||
Sbjct: 589 cctcttggagctgctctgtttactgtcaaacgcctcccattcac 546
to top
>gb|AC168269.3| Mus musculus BAC clone RP23-193M17 from chromosome 17, complete
             sequence
          Length = 223337

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    caaggtagagagaggagaca 86
             ||||||||||||||||||||
Sbjct: 55200 caaggtagagagaggagaca 55181
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    cgagggcagcgatggcgtca 292
              ||||||||||||||||||||
Sbjct: 693529 cgagggcagcgatggcgtca 693548
to top
>gb|AC159319.2| Mus musculus BAC clone RP23-37C8 from chromosome 9, complete sequence
          Length = 175636

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 378   ccactttgccatgctcactgaaca 401
             |||||| |||||||||||||||||
Sbjct: 43697 ccacttggccatgctcactgaaca 43720
to top
>gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete sequence
          Length = 177084

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   cagccttctcagccttctca 586
             ||||||||||||||||||||
Sbjct: 83842 cagccttctcagccttctca 83823
to top
>gb|AY625727.1| Vanmanenia pingchowensis cytochrome b (cytb) gene, partial cds;
           mitochondrial
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 acatctctacagccttctca 577
           ||||||||||||||||||||
Sbjct: 173 acatctctacagccttctca 192
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 69       aggtagagagaggagacatg 88
                ||||||||||||||||||||
Sbjct: 31287487 aggtagagagaggagacatg 31287468
to top
>gb|AC125082.3| Mus musculus BAC clone RP24-90M24 from chromosome 10, complete sequence
          Length = 226256

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    aaagagaaaaacaaggtagagaga 79
             |||||||||||||||| |||||||
Sbjct: 91735 aaagagaaaaacaagggagagaga 91712
to top
>gb|DQ105219.1| Vanmanenia pingchowensis haplotype 2 cytochrome b (cytb) gene,
           partial cds; mitochondrial
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 acatctctacagccttctca 577
           ||||||||||||||||||||
Sbjct: 173 acatctctacagccttctca 192
to top
>gb|AC123069.4| Mus musculus BAC clone RP23-23B21 from 9, complete sequence
          Length = 162961

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 378   ccactttgccatgctcactgaaca 401
             |||||| |||||||||||||||||
Sbjct: 30250 ccacttggccatgctcactgaaca 30227
to top
>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence
          Length = 209021

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   gagcgcccagtgtctctgtc 357
             ||||||||||||||||||||
Sbjct: 49009 gagcgcccagtgtctctgtc 49028
to top
>emb|AL596178.4| Human DNA sequence from clone RP11-236L13 on chromosome 1, complete
             sequence
          Length = 79923

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 570   ccttctcagccttctcaatg 589
             ||||||||||||||||||||
Sbjct: 54772 ccttctcagccttctcaatg 54753
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>ref|XM_501558.1| Yarrowia lipolytica CLIB122, YALI0C07502g predicted mRNA
          Length = 3162

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 571  cttctcagccttctcaatgg 590
            ||||||||||||||||||||
Sbjct: 1482 cttctcagccttctcaatgg 1463
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>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence
          Length = 180338

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     gaggagacatgcatggcaca 97
              ||||||||||||||||||||
Sbjct: 147897 gaggagacatgcatggcaca 147878
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>gb|AC113615.3| Homo sapiens BAC clone RP11-586D19 from 4, complete sequence
          Length = 164043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   aaggatggatgggaggatga 116
            ||||||||||||||||||||
Sbjct: 3937 aaggatggatgggaggatga 3956
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>emb|AJ617306.1| Yarrowia lipolytica MATA locus, containing sla2 gene, mata2 gene,
            apn2 gene (partial) and mata1 gene
          Length = 8174

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 571  cttctcagccttctcaatgg 590
            ||||||||||||||||||||
Sbjct: 2905 cttctcagccttctcaatgg 2886
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>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains
            part of the Ptprd gene for receptor type protein tyrosine
            phosphatase D and a CpG island, complete sequence
          Length = 199012

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  gagcgcccagtgtctctgtc 357
            ||||||||||||||||||||
Sbjct: 6399 gagcgcccagtgtctctgtc 6418
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>emb|BX511115.14| Zebrafish DNA sequence from clone CH211-101B18 in linkage group 19,
             complete sequence
          Length = 169614

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    atagcaaaagagaaaaacaa 69
             ||||||||||||||||||||
Sbjct: 70461 atagcaaaagagaaaaacaa 70480
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>dbj|AB063332.1| Delftia acidovorans plasmid pUO1 DNA, complete sequence
          Length = 67066

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   ctggcatcgaccactttgcc 387
             ||||||||||||||||||||
Sbjct: 13867 ctggcatcgaccactttgcc 13848
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>dbj|AB049198.1| Delftia acidovorans plasmid pUO1 transposon TnHad2 (carrying TnHad1)
             genes, complete cds
          Length = 15604

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   ctggcatcgaccactttgcc 387
             ||||||||||||||||||||
Sbjct: 12966 ctggcatcgaccactttgcc 12947
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>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete
             sequence
          Length = 146022

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aggtagagagaggagacatg 88
             ||||||||||||||||||||
Sbjct: 94728 aggtagagagaggagacatg 94709
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>gb|AY077660.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA, complete cds
          Length = 870

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 500 cctctaggagctgccttgtttacagtcaacagcctcccattcac 543
           ||||| ||||||||  ||||||| |||||  |||||||||||||
Sbjct: 578 cctcttggagctgctctgtttactgtcaaacgcctcccattcac 535
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>gb|AC098567.4| Genomic sequence for Mus musculus, clone RP23-198E6, from chromosome 17,
              complete sequence
          Length = 185277

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     caaggtagagagaggagaca 86
              ||||||||||||||||||||
Sbjct: 173079 caaggtagagagaggagaca 173098
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    gtggccgctcctccgcgacg 235
              ||||||||||||||||||||
Sbjct: 199457 gtggccgctcctccgcgacg 199476
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>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
             complete sequence
          Length = 907057

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 567   cagccttctcagccttctca 586
             ||||||||||||||||||||
Sbjct: 94961 cagccttctcagccttctca 94980



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 567   cagccttctcagccttctca 586
             ||||||||||||||||||||
Sbjct: 94952 cagccttctcagccttctca 94971
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>gb|AY039868.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA, complete cds
          Length = 1067

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 500 cctctaggagctgccttgtttacagtcaacagcctcccattcac 543
           ||||| ||||||||  ||||||| |||||  |||||||||||||
Sbjct: 584 cctcttggagctgctctgtttactgtcaaacgcctcccattcac 541
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>dbj|AK083275.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630032O20 product:unclassifiable, full
            insert sequence
          Length = 3190

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 571  cttctcagccttctcaatgg 590
            ||||||||||||||||||||
Sbjct: 2863 cttctcagccttctcaatgg 2882
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>gb|AC148703.1| Macaca mulatta Major Histocompatibility Complex BAC MMU326I17, complete
             sequence
          Length = 175689

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   cagccttctcagccttctca 586
             ||||||||||||||||||||
Sbjct: 92614 cagccttctcagccttctca 92595
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>gb|AC148691.1| Macaca mulatta Major Histocompatibility Complex BAC MMU234G08, complete
              sequence
          Length = 200068

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    cagccttctcagccttctca 586
              ||||||||||||||||||||
Sbjct: 133255 cagccttctcagccttctca 133236
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>ref|XM_624098.1| PREDICTED: Apis mellifera similar to ENSANGP00000022029 (LOC551709),
            mRNA
          Length = 3417

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 538  attcacatcgtagcgatggaacat 561
            ||||||||| ||||||||||||||
Sbjct: 1505 attcacatcttagcgatggaacat 1528
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 69       aggtagagagaggagacatg 88
                ||||||||||||||||||||
Sbjct: 31378003 aggtagagagaggagacatg 31377984
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>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 567     cagccttctcagccttctca 586
               ||||||||||||||||||||
Sbjct: 1314001 cagccttctcagccttctca 1314020
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>gb|AC008135.12|AC008135 Drosophila melanogaster, chromosome 3R, region 98A-98A, BAC clone
              BACR27H07, complete sequence
          Length = 168306

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    cagccttctcagccttctca 586
              ||||||||||||||||||||
Sbjct: 115649 cagccttctcagccttctca 115630
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>gb|AC067957.7| Homo sapiens BAC clone RP11-82K13 from 2, complete sequence
          Length = 165373

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     agcaaaagagaaaaacaagg 71
              ||||||||||||||||||||
Sbjct: 142477 agcaaaagagaaaaacaagg 142496
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>gb|AC018552.6| Homo sapiens chromosome 16 clone RP11-405F3, complete sequence
          Length = 152156

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ggatggatgggaggatgatg 118
             ||||||||||||||||||||
Sbjct: 34383 ggatggatgggaggatgatg 34402
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>emb|BX511205.2|RN120J22 Rattus norvegicus chromosome 1 BAC RP32-120J22, complete sequence
          Length = 160764

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   ttctcagccttctcaatggt 591
             ||||||||||||||||||||
Sbjct: 21226 ttctcagccttctcaatggt 21245
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>dbj|AB024031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K6A12
          Length = 64136

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 500   cctctaggagctgccttgtttacagtcaacagcctcccattcac 543
             ||||| ||||||||  ||||||| |||||  |||||||||||||
Sbjct: 47776 cctcttggagctgctctgtttactgtcaaacgcctcccattcac 47819
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>ref|NM_211458.1| Eremothecium gossypii AGL271Wp (AGL271W), mRNA
          Length = 3543

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  gtggccgctcctccgcgacg 235
            ||||||||||||||||||||
Sbjct: 1722 gtggccgctcctccgcgacg 1741
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>ref|NM_208613.1| Eremothecium gossypii ACL144Cp (ACL144C), mRNA
          Length = 1650

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 567  cagccttctcagccttctca 586
            ||||||||||||||||||||
Sbjct: 1507 cagccttctcagccttctca 1488



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 567  cagccttctcagccttctca 586
            ||||||||||||||||||||
Sbjct: 1498 cagccttctcagccttctca 1479
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>gb|U65409.1|YLU65409 Yarrowia lipolytica actin binding protein Sla2p (SLA2) gene, complete
            cds
          Length = 4849

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 571  cttctcagccttctcaatgg 590
            ||||||||||||||||||||
Sbjct: 2905 cttctcagccttctcaatgg 2886
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>gb|AE003760.3| Drosophila melanogaster chromosome 3R, section 98 of 118 of the complete
              sequence
          Length = 197156

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    cagccttctcagccttctca 586
              ||||||||||||||||||||
Sbjct: 191461 cagccttctcagccttctca 191442
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>gb|AC005274.1|AC005274 Homo sapiens chromosome 17, clone hRPK.1090_M_7, complete sequence
          Length = 205150

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    gcagatagcaaaagagaaaa 65
             ||||||||||||||||||||
Sbjct: 52351 gcagatagcaaaagagaaaa 52332
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>gb|U77121.1|FSU77121 Fundulus sciadicus cytochrome b (cytb) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 357

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 acatctctacagccttctca 577
           ||||||||||||||||||||
Sbjct: 173 acatctctacagccttctca 192
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>gb|AF012788.1|AF012788 Channa pleurophthalma PLE1 cytochrome b (cytb) gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 306

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 acatctctacagccttctca 577
           ||||||||||||||||||||
Sbjct: 77  acatctctacagccttctca 96
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>emb|AL929072.8| Zebrafish DNA sequence from clone CH211-140B8, complete sequence
          Length = 160432

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    atagcaaaagagaaaaacaa 69
             ||||||||||||||||||||
Sbjct: 61983 atagcaaaagagaaaaacaa 62002
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 571    cttctcagccttctcaatgg 590
              ||||||||||||||||||||
Sbjct: 985890 cttctcagccttctcaatgg 985909
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>dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT45G21, TM0151,
             complete sequence
          Length = 109264

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    gcatggcacaaggatggatg 107
             ||||||||||||||||||||
Sbjct: 35168 gcatggcacaaggatggatg 35149
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>emb|AL929571.10| Mouse DNA sequence from clone RP23-313G3 on chromosome 2, complete
             sequence
          Length = 88123

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   cttctcagccttctcaatgg 590
             ||||||||||||||||||||
Sbjct: 35948 cttctcagccttctcaatgg 35967
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>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
             sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   gaacagctccaccaacctag 416
             ||||||||||||||||||||
Sbjct: 29736 gaacagctccaccaacctag 29755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,367,316
Number of Sequences: 3902068
Number of extensions: 4367316
Number of successful extensions: 98300
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97788
Number of HSP's gapped (non-prelim): 502
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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