ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA 180 3e-42
2gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 180 3e-42
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
4dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
5dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
6dbj|AK119542.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
7dbj|AK105053.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
8dbj|AK067452.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
9gb|BT016698.1| Zea mays clone Contig531 mRNA sequence 174 2e-40
10gb|AY148193.1| Synthetic construct thioredoxin/transketolase fus... 174 2e-40
11dbj|AB066206.1| Polygonum tinctorium mRNA for transketolase, com... 72 2e-09
12gb|AC146329.19| Medicago truncatula clone mth2-5i21, complete se... 60 6e-06
13ref|NM_115939.2| Arabidopsis thaliana transketolase AT3G60750 mR... 56 1e-04
14gb|AY133860.1| Arabidopsis thaliana clone U19695 putative transk... 56 1e-04
15gb|AY091094.1| Arabidopsis thaliana putative transketolase (At3g... 56 1e-04
16gb|AF424631.1|AF424631 Arabidopsis thaliana AT3g60750/T4C21_160 ... 56 1e-04
17emb|BX825521.1|CNS0A7MT Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
18emb|BX824324.1|CNS0A5SX Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
19gb|BT003331.1| Arabidopsis thaliana Unknown protein mRNA, comple... 56 1e-04
20gb|AY085542.1| Arabidopsis thaliana clone 15659 mRNA, complete s... 56 1e-04
21emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BA... 56 1e-04
22ref|NM_130092.2| Arabidopsis thaliana transketolase AT2G45290 mR... 48 0.024
23gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map... 48 0.024
24gb|AY078964.1| Arabidopsis thaliana At2g45290/F4L23.20 mRNA, com... 48 0.024
25gb|AY057528.1| Arabidopsis thaliana At2g45290/F4L23.20 mRNA, com... 48 0.024
26gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 46 0.095
27emb|AJ862835.1| Lolium perenne partial lolp4 gene for pollen all... 44 0.38
28ref|XM_765191.1| Giardia lamblia ATCC 50803 glyceraldehyde 3-pho... 44 0.38
29dbj|AK220725.1| Arabidopsis thaliana mRNA for putative transketo... 44 0.38
30gb|M88062.1|GIAGLYALPH Giardia intestinalis glyceraldehyde 3-pho... 44 0.38
31ref|XM_322348.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
32ref|XM_952641.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
33gb|AE009185.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 1.5
34gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 42 1.5
35gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequ... 42 1.5
36gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 1.5
37gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.5
38gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 40 5.9
39gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 5.9
40gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 5.9
41ref|XM_784712.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.9
42emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 5.9
43gb|AC126122.2| Homo sapiens chromosome 3 clone RP11-751K5, compl... 40 5.9
44gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, compl... 40 5.9
45gb|AC010621.7| Homo sapiens chromosome 5 clone CTD-2034J20, comp... 40 5.9
46gb|AF400075.1|AF400075 Homo sapiens coagulation factor II (throm... 40 5.9
47gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 5.9
48dbj|AK110336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
49emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.9
50emb|AL161747.5|CNS01RHF Human chromosome 14 DNA sequence BAC R-6... 40 5.9
51gb|AC114962.2| Homo sapiens chromosome 5 clone RP11-206N2, compl... 40 5.9 
>ref|XM_550612.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2281

 Score =  180 bits (91), Expect = 3e-42
 Identities = 226/271 (83%)
 Strand = Plus / Minus

                                                                        
Query: 166  tcttacagactcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 225
            |||||||| ||||| ||||  |||||||||||||| || |||||||| ||||||| ||||
Sbjct: 2041 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 1982

                                                                        
Query: 226  atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 285
            |||||    |||||||| || || ||||| ||||||||||| || | |||||| |||   
Sbjct: 1981 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 1922

                                                                        
Query: 286  ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 345
            ||||||||||| |||||||| || ||||| || ||||||| |||||  ||||| || |||
Sbjct: 1921 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 1862

                                                                        
Query: 346  gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 405
            ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| 
Sbjct: 1861 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 1802

                                           
Query: 406  acaaatgacacaacgcggacggtcttcccct 436
            ||||||||||| || ||||| ||||||||||
Sbjct: 1801 acaaatgacacgacacggacagtcttcccct 1771



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 95/108 (87%), Gaps = 6/108 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    aatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacgcaggca 60
            |||||||||| || || |||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 2206 aatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatgcaggca 2149

                                                            
Query: 61   tcctcctctccctccgttattccaagctttctgggcacgagaccttca 108
            ||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 2148 tc--cctctcccttcattattccaagctt--tgggcacaagaccttca 2105
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>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score =  180 bits (91), Expect = 3e-42
 Identities = 226/271 (83%)
 Strand = Plus / Plus

                                                                          
Query: 166    tcttacagactcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 225
              |||||||| ||||| ||||  |||||||||||||| || |||||||| ||||||| ||||
Sbjct: 128493 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 128552

                                                                          
Query: 226    atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 285
              |||||    |||||||| || || ||||| ||||||||||| || | |||||| |||   
Sbjct: 128553 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 128612

                                                                          
Query: 286    ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 345
              ||||||||||| |||||||| || ||||| || ||||||| |||||  ||||| || |||
Sbjct: 128613 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 128672

                                                                          
Query: 346    gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 405
              ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| 
Sbjct: 128673 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 128732

                                             
Query: 406    acaaatgacacaacgcggacggtcttcccct 436
              ||||||||||| || ||||| ||||||||||
Sbjct: 128733 acaaatgacacgacacggacagtcttcccct 128763



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 95/108 (87%), Gaps = 6/108 (5%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacgcaggca 60
              |||||||||| || || |||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 128328 aatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatgcaggca 128385

                                                              
Query: 61     tcctcctctccctccgttattccaagctttctgggcacgagaccttca 108
              ||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 128386 tc--cctctcccttcattattccaagctt--tgggcacaagaccttca 128429
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  180 bits (91), Expect = 3e-42
 Identities = 226/271 (83%)
 Strand = Plus / Plus

                                                                           
Query: 166     tcttacagactcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 225
               |||||||| ||||| ||||  |||||||||||||| || |||||||| ||||||| ||||
Sbjct: 1808201 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 1808260

                                                                           
Query: 226     atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 285
               |||||    |||||||| || || ||||| ||||||||||| || | |||||| |||   
Sbjct: 1808261 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 1808320

                                                                           
Query: 286     ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 345
               ||||||||||| |||||||| || ||||| || ||||||| |||||  ||||| || |||
Sbjct: 1808321 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 1808380

                                                                           
Query: 346     gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 405
               ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| 
Sbjct: 1808381 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 1808440

                                              
Query: 406     acaaatgacacaacgcggacggtcttcccct 436
               ||||||||||| || ||||| ||||||||||
Sbjct: 1808441 acaaatgacacgacacggacagtcttcccct 1808471



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 95/108 (87%), Gaps = 6/108 (5%)
 Strand = Plus / Plus

                                                                           
Query: 1       aatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacgcaggca 60
               |||||||||| || || |||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 1808036 aatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatgcaggca 1808093

                                                               
Query: 61      tcctcctctccctccgttattccaagctttctgggcacgagaccttca 108
               ||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 1808094 tc--cctctcccttcattattccaagctt--tgggcacaagaccttca 1808137
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>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0001H02
          Length = 147160

 Score =  180 bits (91), Expect = 3e-42
 Identities = 226/271 (83%)
 Strand = Plus / Plus

                                                                        
Query: 166  tcttacagactcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 225
            |||||||| ||||| ||||  |||||||||||||| || |||||||| ||||||| ||||
Sbjct: 8679 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 8738

                                                                        
Query: 226  atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 285
            |||||    |||||||| || || ||||| ||||||||||| || | |||||| |||   
Sbjct: 8739 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 8798

                                                                        
Query: 286  ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 345
            ||||||||||| |||||||| || ||||| || ||||||| |||||  ||||| || |||
Sbjct: 8799 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 8858

                                                                        
Query: 346  gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 405
            ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| 
Sbjct: 8859 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 8918

                                           
Query: 406  acaaatgacacaacgcggacggtcttcccct 436
            ||||||||||| || ||||| ||||||||||
Sbjct: 8919 acaaatgacacgacacggacagtcttcccct 8949



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 95/108 (87%), Gaps = 6/108 (5%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacgcaggca 60
            |||||||||| || || |||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 8514 aatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatgcaggca 8571

                                                            
Query: 61   tcctcctctccctccgttattccaagctttctgggcacgagaccttca 108
            ||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 8572 tc--cctctcccttcattattccaagctt--tgggcacaagaccttca 8615
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>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0679C08
          Length = 156266

 Score =  180 bits (91), Expect = 3e-42
 Identities = 226/271 (83%)
 Strand = Plus / Plus

                                                                          
Query: 166    tcttacagactcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 225
              |||||||| ||||| ||||  |||||||||||||| || |||||||| ||||||| ||||
Sbjct: 133350 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 133409

                                                                          
Query: 226    atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 285
              |||||    |||||||| || || ||||| ||||||||||| || | |||||| |||   
Sbjct: 133410 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 133469

                                                                          
Query: 286    ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 345
              ||||||||||| |||||||| || ||||| || ||||||| |||||  ||||| || |||
Sbjct: 133470 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 133529

                                                                          
Query: 346    gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 405
              ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| 
Sbjct: 133530 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 133589

                                             
Query: 406    acaaatgacacaacgcggacggtcttcccct 436
              ||||||||||| || ||||| ||||||||||
Sbjct: 133590 acaaatgacacgacacggacagtcttcccct 133620



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 95/108 (87%), Gaps = 6/108 (5%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacgcaggca 60
              |||||||||| || || |||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 133185 aatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatgcaggca 133242

                                                              
Query: 61     tcctcctctccctccgttattccaagctttctgggcacgagaccttca 108
              ||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 133243 tc--cctctcccttcattattccaagctt--tgggcacaagaccttca 133286
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>dbj|AK119542.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D07, full
           insert sequence
          Length = 1104

 Score =  180 bits (91), Expect = 3e-42
 Identities = 226/271 (83%)
 Strand = Plus / Minus

                                                                       
Query: 166 tcttacagactcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 225
           |||||||| ||||| ||||  |||||||||||||| || |||||||| ||||||| ||||
Sbjct: 884 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 825

                                                                       
Query: 226 atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 285
           |||||    |||||||| || || ||||| ||||||||||| || | |||||| |||   
Sbjct: 824 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 765

                                                                       
Query: 286 ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 345
           ||||||||||| |||||||| || ||||| || ||||||| |||||  ||||| || |||
Sbjct: 764 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 705

                                                                       
Query: 346 gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 405
           ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| 
Sbjct: 704 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 645

                                          
Query: 406 acaaatgacacaacgcggacggtcttcccct 436
           ||||||||||| || ||||| ||||||||||
Sbjct: 644 acaaatgacacgacacggacagtcttcccct 614



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 95/108 (87%), Gaps = 6/108 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    aatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacgcaggca 60
            |||||||||| || || |||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 1049 aatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatgcaggca 992

                                                            
Query: 61   tcctcctctccctccgttattccaagctttctgggcacgagaccttca 108
            ||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 991  tc--cctctcccttcattattccaagctt--tgggcacaagaccttca 948
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>dbj|AK105053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E06, full
            insert sequence
          Length = 2001

 Score =  180 bits (91), Expect = 3e-42
 Identities = 226/271 (83%)
 Strand = Plus / Minus

                                                                        
Query: 166  tcttacagactcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 225
            |||||||| ||||| ||||  |||||||||||||| || |||||||| ||||||| ||||
Sbjct: 1719 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 1660

                                                                        
Query: 226  atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 285
            |||||    |||||||| || || ||||| ||||||||||| || | |||||| |||   
Sbjct: 1659 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 1600

                                                                        
Query: 286  ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 345
            ||||||||||| |||||||| || ||||| || ||||||| |||||  ||||| || |||
Sbjct: 1599 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 1540

                                                                        
Query: 346  gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 405
            ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| 
Sbjct: 1539 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 1480

                                           
Query: 406  acaaatgacacaacgcggacggtcttcccct 436
            ||||||||||| || ||||| ||||||||||
Sbjct: 1479 acaaatgacacgacacggacagtcttcccct 1449



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 95/108 (87%), Gaps = 6/108 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    aatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacgcaggca 60
            |||||||||| || || |||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 1884 aatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatgcaggca 1827

                                                            
Query: 61   tcctcctctccctccgttattccaagctttctgggcacgagaccttca 108
            ||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 1826 tc--cctctcccttcattattccaagctt--tgggcacaagaccttca 1783
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>dbj|AK067452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D17, full
            insert sequence
          Length = 2280

 Score =  180 bits (91), Expect = 3e-42
 Identities = 226/271 (83%)
 Strand = Plus / Minus

                                                                        
Query: 166  tcttacagactcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 225
            |||||||| ||||| ||||  |||||||||||||| || |||||||| ||||||| ||||
Sbjct: 2040 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 1981

                                                                        
Query: 226  atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 285
            |||||    |||||||| || || ||||| ||||||||||| || | |||||| |||   
Sbjct: 1980 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 1921

                                                                        
Query: 286  ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 345
            ||||||||||| |||||||| || ||||| || ||||||| |||||  ||||| || |||
Sbjct: 1920 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 1861

                                                                        
Query: 346  gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 405
            ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| 
Sbjct: 1860 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 1801

                                           
Query: 406  acaaatgacacaacgcggacggtcttcccct 436
            ||||||||||| || ||||| ||||||||||
Sbjct: 1800 acaaatgacacgacacggacagtcttcccct 1770



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 95/108 (87%), Gaps = 6/108 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    aatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacgcaggca 60
            |||||||||| || || |||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 2205 aatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatgcaggca 2148

                                                            
Query: 61   tcctcctctccctccgttattccaagctttctgggcacgagaccttca 108
            ||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 2147 tc--cctctcccttcattattccaagctt--tgggcacaagaccttca 2104
to top
>gb|BT016698.1| Zea mays clone Contig531 mRNA sequence
          Length = 1691

 Score =  174 bits (88), Expect = 2e-40
 Identities = 196/232 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  gtgatgccgtactccttgtagatcttgggggcaggagcgctggcgccgaacttgtcgatg 264
            |||||||||||||||||||||||| |   ||||||||| || ||||||||||||||||||
Sbjct: 1195 gtgatgccgtactccttgtagatcgtcccggcaggagcactcgcgccgaacttgtcgatg 1136

                                                                        
Query: 265  ccgatggtcttgcccttggacccgacgtacttttgccatccgagggtagagccagcttca 324
            || |||| |||||||| ||  ||||||||||| ||||| || || || || ||||| |||
Sbjct: 1135 ccaatggccttgccctgggctccgacgtacttctgccagccaagagtggacccagcctca 1076

                                                                        
Query: 325  atgctgatccttgcggtgacagcctcagggagcacgctctccttgtattcatcggactgc 384
            ||||||||||| || ||||| ||  ||||||| |||||||||||||| ||||| ||||||
Sbjct: 1075 atgctgatcctcgctgtgacggcagcagggaggacgctctccttgtactcatccgactgc 1016

                                                                
Query: 385  tcgtcaaaaagctcccagcagacaaatgacacaacgcggacggtcttcccct 436
            || ||||| || |||||| |||| || || || |||||||| ||||| ||||
Sbjct: 1015 tcatcaaagagttcccaggagacgaacgagacgacgcggaccgtcttgccct 964



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 6    aaaaggcattgtttattacaggcctagaaatac 38
            |||||||||||||||||||||||||||||||||
Sbjct: 1413 aaaaggcattgtttattacaggcctagaaatac 1381
to top
>gb|AY148193.1| Synthetic construct thioredoxin/transketolase fusion protein gene,
            complete cds
          Length = 2415

 Score =  174 bits (88), Expect = 2e-40
 Identities = 196/232 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  gtgatgccgtactccttgtagatcttgggggcaggagcgctggcgccgaacttgtcgatg 264
            |||||||||||||||||||||||| |   ||||||||| || ||||||||||||||||||
Sbjct: 2378 gtgatgccgtactccttgtagatcgtcccggcaggagcactcgcgccgaacttgtcgatg 2319

                                                                        
Query: 265  ccgatggtcttgcccttggacccgacgtacttttgccatccgagggtagagccagcttca 324
            || |||| |||||||| ||  ||||||||||| ||||| ||||| || || || || || 
Sbjct: 2318 ccaatggccttgccctgggctccgacgtacttctgccagccgagagtggacccggcctcg 2259

                                                                        
Query: 325  atgctgatccttgcggtgacagcctcagggagcacgctctccttgtattcatcggactgc 384
            ||||||||||| || ||||| ||  ||||||| |||||||||||||| ||||| ||||||
Sbjct: 2258 atgctgatcctcgctgtgacggcggcagggaggacgctctccttgtactcatccgactgc 2199

                                                                
Query: 385  tcgtcaaaaagctcccagcagacaaatgacacaacgcggacggtcttcccct 436
            || ||||| || |||||| |||| || || || |||||||| ||||||||||
Sbjct: 2198 tcatcaaagagttcccaggagacgaacgagacgacgcggaccgtcttcccct 2147
to top
>dbj|AB066206.1| Polygonum tinctorium mRNA for transketolase, complete cds
          Length = 2065

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 361  ctctccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacac 416
            ||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 1681 ctctccttgtactcatcagactgctcctcaaacagctcccagcacacaaatgacac 1626
to top
>gb|AC146329.19| Medicago truncatula clone mth2-5i21, complete sequence
          Length = 142834

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 350   cagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagc 403
             ||||||| || ||||||||||||||||| ||||| || |||||||| |||||||
Sbjct: 40859 cagggagaacactctccttgtattcatctgactgatcatcaaaaagttcccagc 40912
to top
>ref|NM_115939.2| Arabidopsis thaliana transketolase AT3G60750 mRNA, complete cds
          Length = 2839

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 361  ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 404
            ||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 2315 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2272
to top
>gb|AY133860.1| Arabidopsis thaliana clone U19695 putative transketolase (At3g60750)
            mRNA, complete cds
          Length = 2257

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 361  ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 404
            ||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 2030 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 1987
to top
>gb|AY091094.1| Arabidopsis thaliana putative transketolase (At3g60750) mRNA,
            complete cds
          Length = 2611

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 361  ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 404
            ||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 2111 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2068
to top
>gb|AF424631.1|AF424631 Arabidopsis thaliana AT3g60750/T4C21_160 mRNA, complete cds
          Length = 2528

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 361  ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 404
            ||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 2110 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2067
to top
>emb|BX825521.1|CNS0A7MT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL42ZA07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 796

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 361 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 404
           ||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 473 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 430
to top
>emb|BX824324.1|CNS0A5SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH3ZE10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 796

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 361 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 404
           ||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 473 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 430
to top
>gb|BT003331.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 2561

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 361  ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 404
            ||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 2111 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2068
to top
>gb|AY085542.1| Arabidopsis thaliana clone 15659 mRNA, complete sequence
          Length = 2614

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 361  ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 404
            ||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 2167 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2124
to top
>emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BAC clone T4C21
          Length = 107865

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 361   ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 404
             ||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 57886 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 57843
to top
>ref|NM_130092.2| Arabidopsis thaliana transketolase AT2G45290 mRNA, complete cds
          Length = 2598

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 364  tccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacacaac 419
            ||||||||| |||| || |||||||| ||||||||||| || ||||| || |||||
Sbjct: 2082 tccttgtatgcatctgattgctcgtcgaaaagctcccaacatacaaaggaaacaac 2027
to top
>gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map CIC02E07, complete
             sequence
          Length = 122928

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 364   tccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacacaac 419
             ||||||||| |||| || |||||||| ||||||||||| || ||||| || |||||
Sbjct: 72548 tccttgtatgcatctgattgctcgtcgaaaagctcccaacatacaaaggaaacaac 72603
to top
>gb|AY078964.1| Arabidopsis thaliana At2g45290/F4L23.20 mRNA, complete sequence
          Length = 2581

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 364  tccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacacaac 419
            ||||||||| |||| || |||||||| ||||||||||| || ||||| || |||||
Sbjct: 2067 tccttgtatgcatctgattgctcgtcgaaaagctcccaacatacaaaggaaacaac 2012
to top
>gb|AY057528.1| Arabidopsis thaliana At2g45290/F4L23.20 mRNA, complete cds
          Length = 2206

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 364  tccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacacaac 419
            ||||||||| |||| || |||||||| ||||||||||| || ||||| || |||||
Sbjct: 1868 tccttgtatgcatctgattgctcgtcgaaaagctcccaacatacaaaggaaacaac 1813
to top
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 389     caaaaagctcccagcagacaaat 411
               |||||||||||||||||||||||
Sbjct: 1510792 caaaaagctcccagcagacaaat 1510814
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>emb|AJ862835.1| Lolium perenne partial lolp4 gene for pollen allergen Lol p 4
          Length = 1272

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 188 cgatgacgttctctgcagtgatgccgtact 217
           |||||||||||||||| | |||||||||||
Sbjct: 338 cgatgacgttctctgcggcgatgccgtact 309
to top
>ref|XM_765191.1| Giardia lamblia ATCC 50803 glyceraldehyde 3-phosphate dehydrogenase
            (GLP_80_19533_18523) partial mRNA
          Length = 1011

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 276  gcccttggacccgacgtacttt 297
            ||||||||||||||||||||||
Sbjct: 1005 gcccttggacccgacgtacttt 984
to top
>dbj|AK220725.1| Arabidopsis thaliana mRNA for putative transketolase precursor,
           partial cds, clone: RAFL22-06-F18
          Length = 406

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 364 tccttgtattcatcggactgctcgtcaaaaagctccca 401
           ||||||||| |||| || |||||||| |||||||||||
Sbjct: 42  tccttgtatgcatctgattgctcgtcgaaaagctccca 5
to top
>gb|M88062.1|GIAGLYALPH Giardia intestinalis glyceraldehyde 3-phosphate dehydrogenase (gap1)
            gene, complete cds
          Length = 1178

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 276  gcccttggacccgacgtacttt 297
            ||||||||||||||||||||||
Sbjct: 1161 gcccttggacccgacgtacttt 1140
to top
>ref|XM_322348.1| Neurospora crassa OR74A hypothetical protein (NCU00263.1) partial
            mRNA
          Length = 2631

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 264  gccgatggtcttgcccttgga 284
            |||||||||||||||||||||
Sbjct: 2403 gccgatggtcttgcccttgga 2383
to top
>ref|XM_952641.1| Neurospora crassa OR74A hypothetical protein (NCU00263.1) partial
            mRNA
          Length = 2631

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 264  gccgatggtcttgcccttgga 284
            |||||||||||||||||||||
Sbjct: 2403 gccgatggtcttgcccttgga 2383
to top
>gb|AE009185.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 211
            of 256 of the complete sequence
          Length = 12100

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  atgccgatggtcttgcccttg 282
            |||||||||||||||||||||
Sbjct: 4337 atgccgatggtcttgcccttg 4357
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 198    ctctgcagtgatgccgtactc 218
              |||||||||||||||||||||
Sbjct: 330738 ctctgcagtgatgccgtactc 330758
to top
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence
          Length = 250948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 261    gatgccgatggtcttgccctt 281
              |||||||||||||||||||||
Sbjct: 171928 gatgccgatggtcttgccctt 171908
to top
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 262     atgccgatggtcttgcccttg 282
               |||||||||||||||||||||
Sbjct: 2340060 atgccgatggtcttgcccttg 2340080
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 247     gcgccgaacttgtcgatgccgatgg 271
               ||||||||| |||||||||||||||
Sbjct: 2085843 gcgccgaacgtgtcgatgccgatgg 2085867
to top
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 186    ggcgatgacgttctctgcagtgatgccg 213
              ||||||||||| ||| ||||||||||||
Sbjct: 119991 ggcgatgacgtactcagcagtgatgccg 120018
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 258     gtcgatgccgatggtcttgccctt 281
               ||||| ||||||||||||||||||
Sbjct: 3108742 gtcgacgccgatggtcttgccctt 3108765
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 262     atgccgatggtcttgccctt 281
               ||||||||||||||||||||
Sbjct: 1345343 atgccgatggtcttgccctt 1345324
to top
>ref|XM_784712.1| PREDICTED: Strongylocentrotus purpuratus similar to DEAD
           (Asp-Glu-Ala-Asp) box polypeptide 23 (LOC584867),
           partial mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  catcctcctctccctccgtt 78
           ||||||||||||||||||||
Sbjct: 585 catcctcctctccctccgtt 566
to top
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 6       aaaaggcattgtttattacaggcc 29
               |||||||||||||||| |||||||
Sbjct: 1831511 aaaaggcattgtttataacaggcc 1831488
to top
>gb|AC126122.2| Homo sapiens chromosome 3 clone RP11-751K5, complete sequence
          Length = 3917

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   ttccaagctttctgggcacg 99
            ||||||||||||||||||||
Sbjct: 2973 ttccaagctttctgggcacg 2954
to top
>gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, complete sequence
          Length = 192063

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  ttccaagctttctgggcacg 99
           ||||||||||||||||||||
Sbjct: 830 ttccaagctttctgggcacg 811
to top
>gb|AC010621.7| Homo sapiens chromosome 5 clone CTD-2034J20, complete sequence
          Length = 52368

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 13    attgtttattacaggcctagaaat 36
             |||||||||||||| |||||||||
Sbjct: 36359 attgtttattacagccctagaaat 36382
to top
>gb|AF400075.1|AF400075 Homo sapiens coagulation factor II (thrombin) receptor-like 1 (F2RL1)
            gene, complete cds
          Length = 18351

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 13   attgtttattacaggcctagaaat 36
            |||||||||||||| |||||||||
Sbjct: 8934 attgtttattacagccctagaaat 8957
to top
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     cgaacttgtcgatgccgatg 270
               ||||||||||||||||||||
Sbjct: 2234310 cgaacttgtcgatgccgatg 2234329
to top
>dbj|AK110336.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-E12, full
            insert sequence
          Length = 2492

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 235  gcaggagcgctggcgccgaacttgtcgatgcc 266
            ||||| |||||||||||||| | |||||||||
Sbjct: 2107 gcaggtgcgctggcgccgaaatcgtcgatgcc 2076
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 263     tgccgatggtcttgcccttg 282
               ||||||||||||||||||||
Sbjct: 5534504 tgccgatggtcttgcccttg 5534485
to top
>emb|AL161747.5|CNS01RHF Human chromosome 14 DNA sequence BAC R-689J19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170588

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tcctcctctccctccgttat 80
             ||||||||||||||||||||
Sbjct: 25608 tcctcctctccctccgttat 25589
to top
>gb|AC114962.2| Homo sapiens chromosome 5 clone RP11-206N2, complete sequence
          Length = 107278

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    attgtttattacaggcctagaaat 36
             |||||||||||||| |||||||||
Sbjct: 94759 attgtttattacagccctagaaat 94736


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,136,948
Number of Sequences: 3902068
Number of extensions: 3136948
Number of successful extensions: 63267
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62983
Number of HSP's gapped (non-prelim): 260
length of query: 436
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 414
effective length of database: 17,147,199,772
effective search space: 7098940705608
effective search space used: 7098940705608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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