| Clone Name | rbags3d02 |
|---|---|
| Clone Library Name | barley_pub |
>IF5A5_SOLTU (P56337) Eukaryotic translation initiation factor 5A-5 (eIF-5A-5)| (eIF-4D) Length = 159 Score = 148 bits (374), Expect = 8e-36 Identities = 68/85 (80%), Positives = 79/85 (92%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDL+LPTDD LL Q+K GFA Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFA 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL+LSVMSAMGEEQIC +K+IG Sbjct: 133 EGKDLVLSVMSAMGEEQICGIKDIG 157
>IF5A1_LYCES (Q9AXQ6) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| Length = 159 Score = 148 bits (374), Expect = 8e-36 Identities = 68/85 (80%), Positives = 79/85 (92%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDL+LPTDD LL Q+K GFA Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFA 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL+LSVMSAMGEEQIC +K+IG Sbjct: 133 EGKDLVLSVMSAMGEEQICGIKDIG 157
>IF5A4_LYCES (Q9AXQ3) Eukaryotic translation initiation factor 5A-4 (eIF-5A-4)| Length = 160 Score = 148 bits (373), Expect = 1e-35 Identities = 69/85 (81%), Positives = 79/85 (92%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDL+LPTDD LL Q+K GF Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLNQVKGGFE 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL+LSVMSAMGEEQICAVK+IG Sbjct: 133 EGKDLVLSVMSAMGEEQICAVKDIG 157
>IF5A1_SOLTU (P56333) Eukaryotic translation initiation factor 5A-1/2| (eIF-5A-1/2) (eIF-4D) Length = 160 Score = 148 bits (373), Expect = 1e-35 Identities = 69/85 (81%), Positives = 79/85 (92%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDL+LPTDD LL Q+K GF Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDALLNQVKGGFE 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL+LSVMSAMGEEQICAVK+IG Sbjct: 133 EGKDLVLSVMSAMGEEQICAVKDIG 157
>IF5A_SENVE (Q9SC12) Eukaryotic translation initiation factor 5A (eIF-5A)| Length = 159 Score = 147 bits (371), Expect = 2e-35 Identities = 69/85 (81%), Positives = 79/85 (92%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDLKLPTDD LL QIK GF Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFG 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL++SVMSAMGEEQICA+K+IG Sbjct: 133 EGKDLVVSVMSAMGEEQICALKDIG 157
>IF5A2_ARATH (Q93VP3) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| Length = 159 Score = 147 bits (371), Expect = 2e-35 Identities = 68/88 (77%), Positives = 80/88 (90%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDIT+D +VSLLT+SG TKDDLKLPTDD L Q++ GF Sbjct: 72 DIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFD 131 Query: 342 DGKDLILSVMSAMGEEQICAVKEIGGGK 259 +GKD+++SVMS+MGEEQICAVKE+GGGK Sbjct: 132 EGKDIVVSVMSSMGEEQICAVKEVGGGK 159
>IF5A1_MEDSA (P26564) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-4D) Length = 161 Score = 146 bits (369), Expect = 3e-35 Identities = 69/84 (82%), Positives = 79/84 (94%) Frame = -1 Query: 516 VPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFADG 337 VPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDLKLPTDD LL QIK GFA+G Sbjct: 76 VPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEG 135 Query: 336 KDLILSVMSAMGEEQICAVKEIGG 265 KDL++SVMSAMGEEQICA+K+IGG Sbjct: 136 KDLVVSVMSAMGEEQICALKDIGG 159
>IF5A2_NICPL (P24922) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| (eIF-4D) Length = 159 Score = 146 bits (369), Expect = 3e-35 Identities = 69/85 (81%), Positives = 80/85 (94%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDL+LPTDD LL QIK GFA Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQIKDGFA 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL++SVMSAMGEEQICA+K+IG Sbjct: 133 EGKDLVVSVMSAMGEEQICALKDIG 157
>IF5A2_MEDSA (Q945F4) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| Length = 159 Score = 146 bits (369), Expect = 3e-35 Identities = 69/85 (81%), Positives = 80/85 (94%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLT++G+TKDDLKLPTDD LL QIK GFA Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFA 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 DGKDL++SVMSAMGEEQICA+K+IG Sbjct: 133 DGKDLVVSVMSAMGEEQICALKDIG 157
>IF5A1_TOBAC (P69040) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-4D) Length = 159 Score = 144 bits (364), Expect = 1e-34 Identities = 67/85 (78%), Positives = 78/85 (91%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDL+LPTDD LL IK GFA Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFA 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL+LSVMSAMGEEQIC +K++G Sbjct: 133 EGKDLVLSVMSAMGEEQICGIKDVG 157
>IF5A1_NICPL (P69039) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-4D) Length = 159 Score = 144 bits (364), Expect = 1e-34 Identities = 67/85 (78%), Positives = 78/85 (91%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDL+LPTDD LL IK GFA Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFA 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL+LSVMSAMGEEQIC +K++G Sbjct: 133 EGKDLVLSVMSAMGEEQICGIKDVG 157
>IF5A_MANES (Q9AXJ4) Eukaryotic translation initiation factor 5A (eIF-5A)| Length = 160 Score = 143 bits (360), Expect = 3e-34 Identities = 66/85 (77%), Positives = 80/85 (94%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTE+GNTKDDL+LPTD+ LL QIK GFA Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFA 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL++SVMSAMGEE+IC++K+IG Sbjct: 133 EGKDLVVSVMSAMGEERICSLKDIG 157
>IF5A_DIACA (Q9AXQ7) Eukaryotic translation initiation factor 5A (eIF-5A)| Length = 160 Score = 142 bits (359), Expect = 4e-34 Identities = 67/88 (76%), Positives = 78/88 (88%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQL+DIT+D +VSLLT+SG+TKDDLKLP D+ L+ Q+K GF Sbjct: 73 DIVPSSHNCDVPHVNRVDYQLLDITEDGFVSLLTDSGDTKDDLKLPADEALVKQMKEGFE 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIGGGK 259 GKDLILSVM AMGEEQICAVK++ GGK Sbjct: 133 AGKDLILSVMCAMGEEQICAVKDVSGGK 160
>IF5A4_SOLTU (P56336) Eukaryotic translation initiation factor 5A-4 (eIF-5A-4)| (eIF-4D) Length = 159 Score = 142 bits (357), Expect = 7e-34 Identities = 67/85 (78%), Positives = 79/85 (92%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLT++GNTKDDL+LPTDD LL QIK GFA Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKDGFA 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL++SVMSAMGEEQI A+K+IG Sbjct: 133 EGKDLVVSVMSAMGEEQINALKDIG 157
>IF5A1_ARATH (Q9XI91) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| Length = 158 Score = 140 bits (354), Expect = 2e-33 Identities = 67/85 (78%), Positives = 78/85 (91%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D YVSLLT++G+TKDDLKLP DD LL QIK+GF Sbjct: 72 DIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLLQQIKSGFD 131 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 DGKDL++SVMSAMGEEQI A+K+IG Sbjct: 132 DGKDLVVSVMSAMGEEQINALKDIG 156
>IF5A3_ARATH (Q9C505) Eukaryotic translation initiation factor 5A-3 (eIF-5A-3)| Length = 158 Score = 140 bits (353), Expect = 2e-33 Identities = 63/85 (74%), Positives = 79/85 (92%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLT++G+TKDDLKLPTD+ LL Q+K GF Sbjct: 72 DIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFE 131 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKD+++SVMSAMGEEQ+CA+KE+G Sbjct: 132 EGKDIVVSVMSAMGEEQMCALKEVG 156
>IF5A3_SOLTU (P56335) Eukaryotic translation initiation factor 5A-3 (eIF-5A-3)| (eIF-4D) Length = 160 Score = 140 bits (353), Expect = 2e-33 Identities = 66/85 (77%), Positives = 78/85 (91%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTESGNTKDDL+LPTD+ LL Q+K GF Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDESLLKQVKDGFQ 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL++SVMSAMGEEQI A+K+IG Sbjct: 133 EGKDLVVSVMSAMGEEQINAIKDIG 157
>IF5A2_LYCES (Q9AXQ5) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| Length = 160 Score = 140 bits (352), Expect = 3e-33 Identities = 66/85 (77%), Positives = 78/85 (91%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLTESGNTKDDL+LPTD+ LL Q+K GF Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDENLLKQVKDGFQ 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL++SVMSAMGEEQI AVK++G Sbjct: 133 EGKDLVVSVMSAMGEEQINAVKDVG 157
>IF5A3_LYCES (Q9AXQ4) Eukaryotic translation initiation factor 5A-3 (eIF-5A-3)| Length = 159 Score = 137 bits (345), Expect = 2e-32 Identities = 65/85 (76%), Positives = 78/85 (91%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCDVPHV+R DYQLIDI++D +VSLLT++GNTKDDL+LPTD+ LL IK GFA Sbjct: 73 DIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDENLLSLIKDGFA 132 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 +GKDL++SVMSAMGEEQI A+K+IG Sbjct: 133 EGKDLVVSVMSAMGEEQINALKDIG 157
>IF5A_MAIZE (P80639) Eukaryotic translation initiation factor 5A (eIF-5A)| (eIF-4D) Length = 160 Score = 135 bits (340), Expect = 7e-32 Identities = 60/85 (70%), Positives = 75/85 (88%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DIVPSSHNCD+PHV+R +YQLIDI++D +VSLLT GNTKDDL+LPTD+ L+ QIK GF Sbjct: 74 DIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFE 133 Query: 342 DGKDLILSVMSAMGEEQICAVKEIG 268 GKDL+++V SAMGEEQICA+K++G Sbjct: 134 SGKDLVVTVQSAMGEEQICALKDVG 158
>IF5A_SPOFR (P62925) Eukaryotic translation initiation factor 5A (eIF-5A)| Length = 160 Score = 89.4 bits (220), Expect = 6e-18 Identities = 41/82 (50%), Positives = 62/82 (75%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVPHV R+DYQL DI+DD Y++L+ ++G+ ++DLK+P D L Q+++ F Sbjct: 73 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD-LGTQLRSDFD 131 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 GK+L+ +V+ + GEE + AVK Sbjct: 132 SGKELLCTVLKSCGEECVIAVK 153
>IF5A_SPOEX (P62924) Eukaryotic translation initiation factor 5A (eIF-5A)| Length = 160 Score = 89.4 bits (220), Expect = 6e-18 Identities = 41/82 (50%), Positives = 62/82 (75%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVPHV R+DYQL DI+DD Y++L+ ++G+ ++DLK+P D L Q+++ F Sbjct: 73 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD-LGTQLRSDFD 131 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 GK+L+ +V+ + GEE + AVK Sbjct: 132 SGKELLCTVLKSCGEECVIAVK 153
>IF5A_CANAL (O94083) Eukaryotic translation initiation factor 5A (eIF-5A)| (eIF-4D) Length = 157 Score = 86.7 bits (213), Expect = 4e-17 Identities = 43/87 (49%), Positives = 66/87 (75%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 D+ PS+HN +VP+V RQ++QL+DI DD Y+SL+T G+TKDD+K+P + L ++++ F Sbjct: 71 DLSPSTHNMEVPNVSRQEFQLLDI-DDGYLSLMTADGDTKDDVKVPEGE-LGDKLQSEFD 128 Query: 342 DGKDLILSVMSAMGEEQICAVKEIGGG 262 +GKDLI++++SAMGEE + KE G Sbjct: 129 EGKDLIVTIISAMGEEAAISYKEAPKG 155
>IF5A_DROME (Q9GU68) Eukaryotic translation initiation factor 5A (eIF-5A)| Length = 159 Score = 85.1 bits (209), Expect = 1e-16 Identities = 41/82 (50%), Positives = 61/82 (74%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP+V R+D QLI I+DD +++L+TESG+ ++DLK+P + L Q++ F Sbjct: 72 DICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGE-LGEQLRLDFD 130 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 GKDL+ +V+ A GEE + A+K Sbjct: 131 SGKDLLCTVLKACGEECVIAIK 152
>IF5A2_SCHPO (Q9UST4) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| Length = 157 Score = 85.1 bits (209), Expect = 1e-16 Identities = 43/83 (51%), Positives = 62/83 (74%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 D+ PS+HN DVP V R +YQL++I DD Y++L+T G TKDD++LP + L +I+ GF Sbjct: 73 DMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFE 130 Query: 342 DGKDLILSVMSAMGEEQICAVKE 274 +GKDLI++V+SAMGEE A ++ Sbjct: 131 EGKDLIITVVSAMGEEIALACRD 153
>IF5A1_SCHPO (P56289) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| Length = 157 Score = 84.3 bits (207), Expect = 2e-16 Identities = 42/83 (50%), Positives = 62/83 (74%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 D+ PS+HN DVP V R +YQL++I DD Y++L+T G TKDD++LP + L +I+ GF Sbjct: 73 DMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFD 130 Query: 342 DGKDLILSVMSAMGEEQICAVKE 274 +G+DLI++V+SAMGEE A ++ Sbjct: 131 EGRDLIITVVSAMGEETALACRD 153
>IF5A1_YEAST (P19211) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-4D) (Hypusine-containing protein HP1) Length = 156 Score = 81.6 bits (200), Expect = 1e-15 Identities = 41/83 (49%), Positives = 59/83 (71%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 D+ PS+HN +VP V R +YQL+DI DD Y+SL+T G TKDD+K P + L ++ F Sbjct: 71 DLSPSTHNLEVPFVKRSEYQLLDI-DDGYLSLMTMDGETKDDVKAPEGE-LGDSMQAAFD 128 Query: 342 DGKDLILSVMSAMGEEQICAVKE 274 +GKDL+++++SAMGEE + KE Sbjct: 129 EGKDLMVTIISAMGEEAAISFKE 151
>IF5A2_YEAST (P23301) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| (eIF-4D) (Hypusine-containing protein HP2) Length = 156 Score = 80.1 bits (196), Expect = 3e-15 Identities = 40/83 (48%), Positives = 60/83 (72%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 D+ PS+HN +VP V R +YQL+DI DD ++SL+ G+TKDD+K P + L ++T F Sbjct: 71 DLSPSTHNMEVPVVKRNEYQLLDI-DDGFLSLMNMDGDTKDDVKAPEGE-LGDSLQTAFD 128 Query: 342 DGKDLILSVMSAMGEEQICAVKE 274 +GKDL+++++SAMGEE + KE Sbjct: 129 EGKDLMVTIISAMGEEAAISFKE 151
>IF5A2_CHICK (Q07460) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D) Length = 152 Score = 78.6 bits (192), Expect = 1e-14 Identities = 44/82 (53%), Positives = 57/82 (69%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R DYQLI I D Y+SLLTESG ++DLKLP D L +I+ F Sbjct: 70 DICPSTHNMDVPNIKRNDYQLIGI-QDGYLSLLTESGEVREDLKLPEGD-LGKEIEGKFN 127 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 +D+ +SV+SAM EE A+K Sbjct: 128 ANEDVQISVISAMNEECAVAIK 149
>IF5A2_PONPY (Q5R898) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) Length = 152 Score = 76.3 bits (186), Expect = 5e-14 Identities = 42/82 (51%), Positives = 57/82 (69%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R DYQLI I D Y+SLLTE+G ++DLKLP + L +I+ + Sbjct: 70 DICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYN 127 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 G+D+ +SVM AM EE A+K Sbjct: 128 AGEDVQVSVMCAMSEEYAVAIK 149
>IF5A2_MOUSE (Q8BGY2) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) Length = 152 Score = 76.3 bits (186), Expect = 5e-14 Identities = 42/82 (51%), Positives = 57/82 (69%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R DYQLI I D Y+SLLTE+G ++DLKLP + L +I+ + Sbjct: 70 DICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYN 127 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 G+D+ +SVM AM EE A+K Sbjct: 128 AGEDVQVSVMCAMSEEYAVAIK 149
>IF5A2_HUMAN (Q9GZV4) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) Length = 152 Score = 76.3 bits (186), Expect = 5e-14 Identities = 42/82 (51%), Positives = 57/82 (69%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R DYQLI I D Y+SLLTE+G ++DLKLP + L +I+ + Sbjct: 70 DICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYN 127 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 G+D+ +SVM AM EE A+K Sbjct: 128 AGEDVQVSVMCAMSEEYAVAIK 149
>IF5A1_RABIT (P10160) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D) Length = 153 Score = 74.7 bits (182), Expect = 1e-13 Identities = 38/82 (46%), Positives = 58/82 (70%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R D+QLI I D Y+SLL +SG ++DL+LP D L +I+ + Sbjct: 70 DICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYD 127 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 G++++++V+SAM EE A+K Sbjct: 128 SGEEILITVLSAMTEEAAVAIK 149
>IF5A1_RAT (Q3T1J1) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D) Length = 153 Score = 73.6 bits (179), Expect = 3e-13 Identities = 38/82 (46%), Positives = 58/82 (70%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R D+QLI I D Y+SLL +SG ++DL+LP D L +I+ + Sbjct: 70 DICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYD 127 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 G++++++V+SAM EE A+K Sbjct: 128 CGEEILITVLSAMTEEAAVAIK 149
>IF5A1_MOUSE (P63242) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D) Length = 153 Score = 73.6 bits (179), Expect = 3e-13 Identities = 38/82 (46%), Positives = 58/82 (70%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R D+QLI I D Y+SLL +SG ++DL+LP D L +I+ + Sbjct: 70 DICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYD 127 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 G++++++V+SAM EE A+K Sbjct: 128 CGEEILITVLSAMTEEAAVAIK 149
>IF5A1_HUMAN (P63241) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D) (Rev-binding factor) Length = 153 Score = 73.6 bits (179), Expect = 3e-13 Identities = 38/82 (46%), Positives = 58/82 (70%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R D+QLI I D Y+SLL +SG ++DL+LP D L +I+ + Sbjct: 70 DICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYD 127 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 G++++++V+SAM EE A+K Sbjct: 128 CGEEILITVLSAMTEEAAVAIK 149
>IF5A1_BOVIN (Q6EWQ7) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D) Length = 153 Score = 73.6 bits (179), Expect = 3e-13 Identities = 38/82 (46%), Positives = 58/82 (70%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R D+QLI I D Y+SLL +SG ++DL+LP D L +I+ + Sbjct: 70 DICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYD 127 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 G++++++V+SAM EE A+K Sbjct: 128 CGEEILITVLSAMTEEAAVAIK 149
>IF5A_DICDI (P13651) Eukaryotic translation initiation factor 5A (eIF-5A)| (eIF-4D) Length = 169 Score = 71.2 bits (173), Expect = 2e-12 Identities = 36/82 (43%), Positives = 57/82 (69%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 +I PS+HN DVP+V R++Y ++D+ D Y+SLL G K+DL LP DD+ +I Sbjct: 86 EICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDDI-GKEITQMLK 143 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 +GK+ ++SV+SA+G+E + +VK Sbjct: 144 EGKEPLVSVISALGKEGVVSVK 165
>IF5A_NEUCR (P38672) Eukaryotic translation initiation factor 5A (eIF-5A)| (eIF-4D) Length = 163 Score = 62.4 bits (150), Expect = 7e-10 Identities = 35/83 (42%), Positives = 51/83 (61%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 D+ PS+HN DVP+V R DYQ I D+ ++ L+ +G K +LK+P + L +I+ Sbjct: 78 DLCPSTHNMDVPNVKRTDYQFSYI-DEDFLVLIDSNGEEKRELKMPEGE-LAKRIEKLEE 135 Query: 342 DGKDLILSVMSAMGEEQICAVKE 274 +GKD + V +AMGEE VKE Sbjct: 136 EGKDFFVGVQTAMGEEAAIDVKE 158
>IF5A2_CAEEL (Q20751) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2)| (Initiation factor five protein 2) Length = 161 Score = 60.1 bits (144), Expect = 4e-09 Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 2/84 (2%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLL-TESGNTKDDLKLPTDDVLLGQIKTGF 346 DI PS+HN DVP V R++Y L+ I DD Y SL+ ES KDDLKLP D L QI+ + Sbjct: 75 DICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAY 132 Query: 345 -ADGKDLILSVMSAMGEEQICAVK 277 D +++ V+SA+GEE I K Sbjct: 133 EKDEGSVLVQVVSAIGEEAILGWK 156
>IF5A1_CHICK (Q09121) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D) Length = 143 Score = 55.1 bits (131), Expect = 1e-07 Identities = 29/66 (43%), Positives = 46/66 (69%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP++ R D+QLI I D ++SLL +SG ++DL+LP + L +I+ + Sbjct: 70 DICPSTHNMDVPNIKRCDFQLIGI-QDGFLSLLQDSGEVREDLRLPEGE-LGREIEQKYD 127 Query: 342 DGKDLI 325 G+++I Sbjct: 128 CGEEII 133
>IF5A1_CAEEL (P34563) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| (Initiation factor five protein 1) Length = 161 Score = 53.1 bits (126), Expect = 4e-07 Identities = 32/82 (39%), Positives = 45/82 (54%) Frame = -1 Query: 522 DIVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFA 343 DI PS+HN DVP V R++Y L+ I D + ES KDDLK+P D+ + Sbjct: 75 DICPSTHNMDVPVVKRREYILMSIEDGFCSLMDPESCELKDDLKMPEGDLGNTIREALEK 134 Query: 342 DGKDLILSVMSAMGEEQICAVK 277 D +++ V++A GEE I K Sbjct: 135 DEGSVLVQVVAACGEEAILGYK 156
>IF5A_PYRKO (Q5JI42) Translation initiation factor 5A (eIF-5A)| (Hypusine-containing protein) Length = 136 Score = 30.0 bits (66), Expect = 4.0 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -1 Query: 519 IVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKD-DLKLPTDDVLLGQIKTG 349 + P+S DVP +D++ Q+I IT D + E+ T D ++ DD + GQ+ G Sbjct: 59 VKPTSAEVDVPIIDKRVGQIIAITPDTVQLMDMETYETFDVPIEGGVDDEVKGQLTEG 116
>FAU_DROME (Q9VGX3) Protein anoxia up-regulated| Length = 619 Score = 30.0 bits (66), Expect = 4.0 Identities = 19/61 (31%), Positives = 26/61 (42%) Frame = +2 Query: 161 PNRYLDAYVCVSQTPRSTRYQVSQLGNXCTAAYLPPPISFTAQICSSPMADITDRIRSLP 340 P+ Y Y+ S T + Y S T Y P +I SP+ IT +RS+P Sbjct: 116 PSTYTSTYIPTSYTTYTPSYAYSP--TTVTRVYAPRSSLSPLRITPSPVRVITSPVRSVP 173 Query: 341 S 343 S Sbjct: 174 S 174
>IF5A_PYRHO (O50089) Translation initiation factor 5A (eIF-5A)| (Hypusine-containing protein) (PhoIF-5A) Length = 138 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/84 (25%), Positives = 40/84 (47%) Frame = -1 Query: 519 IVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFAD 340 + P+S DVP +D++ Q+I IT D + E T + ++P D + +I+ + Sbjct: 59 VKPTSAEVDVPIIDKKTAQVIAITPDTVQIMDME---TYETFEVPIDTGVADEIRDQLKE 115 Query: 339 GKDLILSVMSAMGEEQICAVKEIG 268 G + + +G +I +K G Sbjct: 116 G--INVEYWETLGRIKIMRIKGEG 137
>RIB2_HUMAN (P04844) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 63 kDa subunit precursor (EC 2.4.1.119) (Ribophorin II) (RPN-II) (RIBIIR) Length = 631 Score = 29.3 bits (64), Expect = 6.9 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 4/124 (3%) Frame = +1 Query: 136 TNLDQTCFTQQIS*CLCMC---ISNTQKH*IPSITARQSXHRCLLATTDFLHSADLFFTH 306 +N+D + Q S L C ISN K + + + S + T H+ Sbjct: 82 SNVDSLFYAAQASQALSGCEISISNETKDLLLAAVSEDS------SVTQIYHAVAALSGF 135 Query: 307 GRHHRQDQVLAISKSSLDLAKQNIISGKLQVILSVATLSQQADI-XIISYVNQLIILAVN 483 G + A+S + L+K+ + +Q + + + LSQQAD+ I+ + L+ Sbjct: 136 GLPLASQE--ALSALTARLSKEETVLATVQALQTASHLSQQADLRSIVEEIEDLVARLDE 193 Query: 484 MGNV 495 +G V Sbjct: 194 LGGV 197
>LEPA_EHRCJ (Q3YSC2) GTP-binding protein lepA| Length = 598 Score = 29.3 bits (64), Expect = 6.9 Identities = 20/80 (25%), Positives = 31/80 (38%) Frame = +2 Query: 125 VKNTQIWIKLVSPNRYLDAYVCVSQTPRSTRYQVSQLGNXCTAAYLPPPISFTAQICSSP 304 +K I ++ P++YL + + R + +S GN Y P S Sbjct: 401 IKEPWICATIMVPDQYLGVIMSLCNNKRGEKLDLSYSGNTALLKYRLP--------LSEV 452 Query: 305 MADITDRIRSLPSANPVLIW 364 + D DRI+SL L W Sbjct: 453 VFDFYDRIKSLSKGYASLDW 472
>IF5A_PYRFU (Q8U1E4) Translation initiation factor 5A (eIF-5A)| (Hypusine-containing protein) Length = 138 Score = 28.9 bits (63), Expect = 9.0 Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 7/83 (8%) Frame = -1 Query: 519 IVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFAD 340 + P+S DVP +D++ Q+I +T D + E T + ++P D + +IK + Sbjct: 59 VKPTSAEVDVPIIDKRTAQVIAVTPDTVQIMDME---TYEMFEVPLDTGVEEEIKDKIKE 115 Query: 339 GKDL-------ILSVMSAMGEEQ 292 G ++ + +M GEE+ Sbjct: 116 GINVEYWETLGRIKIMRIKGEEE 138
>IF5A_PYRAB (Q9V0M2) Translation initiation factor 5A (eIF-5A)| (Hypusine-containing protein) Length = 138 Score = 28.9 bits (63), Expect = 9.0 Identities = 21/84 (25%), Positives = 40/84 (47%) Frame = -1 Query: 519 IVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIKTGFAD 340 + P+S DVP +D++ Q+I IT D + E T + ++P D + +I+ + Sbjct: 59 VKPTSAEVDVPIIDKKTAQVIAITPDTVQIMDME---TYEMFEVPIDTGVAEEIRDQLKE 115 Query: 339 GKDLILSVMSAMGEEQICAVKEIG 268 G + + +G +I +K G Sbjct: 116 G--INVEYWETLGRVKIMRIKGEG 137
>MYT1L_RAT (P70475) Myelin transcription factor 1-like protein (MyT1L protein)| (Neural zinc finger factor 1) (NZF-1) Length = 1187 Score = 28.9 bits (63), Expect = 9.0 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = -1 Query: 519 IVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIK 355 ++ S N +PH+D + Q D YV+ LTE +D + P + LL IK Sbjct: 1129 LIHSLANIQLPHMDPINEQNFD----AYVTTLTEMYTNQDRYQSPENKALLENIK 1179
>MYT1L_MOUSE (P97500) Myelin transcription factor 1-like protein (MyT1L protein)| (Postmitotic neural gene 1 protein) (Zinc finger protein Png-1) (Neural zinc finger factor 1) (NZF-1) Length = 1187 Score = 28.9 bits (63), Expect = 9.0 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = -1 Query: 519 IVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIK 355 ++ S N +PH+D + Q D YV+ LTE +D + P + LL IK Sbjct: 1129 LIHSLANIQLPHMDPINEQNFD----AYVTTLTEMYTNQDRYQSPENKALLENIK 1179
>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)| (MyT1-L) Length = 1186 Score = 28.9 bits (63), Expect = 9.0 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = -1 Query: 519 IVPSSHNCDVPHVDRQDYQLIDITDDXYVSLLTESGNTKDDLKLPTDDVLLGQIK 355 ++ S N +PH+D + Q D YV+ LTE +D + P + LL IK Sbjct: 1128 LIHSLANIQLPHMDPINEQNFD----AYVTTLTEMYTNQDRYQSPENKALLENIK 1178
>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A (EC| 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and leucine-rich repeat protein 11) Length = 1146 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = -1 Query: 420 ESGNTKDDLKLPTDDVLLGQIKTGFADGKDLILSVMSAMGEEQICAVKEIGGGK*AAVXX 241 E +++ + T++V+LGQ K + KD+ LSV + E++C + Sbjct: 851 EEEEEEEEEEEETENVMLGQRKDSTSMQKDVWLSVFHYLTHEELCICMRV---------- 900 Query: 240 LPSCDTWY 217 C WY Sbjct: 901 ---CKAWY 905 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,862,437 Number of Sequences: 219361 Number of extensions: 1473622 Number of successful extensions: 3947 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 3828 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3912 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)