>emb|BX957317.12| Zebrafish DNA sequence from clone DKEY-150K17 in linkage group 19,
             complete sequence
          Length = 222684

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 85    atgcctcaagttcctcaatca 105
             |||||||||||||||||||||
Sbjct: 95503 atgcctcaagttcctcaatca 95523

>emb|CR925810.4| Zebrafish DNA sequence from clone DKEY-250M6 in linkage group 10,
              complete sequence
          Length = 197451

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 130    ctccatccccagcatcacctg 150
              |||||||||||||||||||||
Sbjct: 129336 ctccatccccagcatcacctg 129316

>gb|AC126023.3| Mus musculus BAC clone RP24-422I18 from chromosome 16, complete sequence
          Length = 198296

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    tccatccccagcatcacctg 150
              ||||||||||||||||||||
Sbjct: 131349 tccatccccagcatcacctg 131368

>ref|XM_001001667.1| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 3, transcript variant 3 (Lrch3),
            mRNA
          Length = 5619

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  tccatccccagcatcacctg 150
            ||||||||||||||||||||
Sbjct: 3416 tccatccccagcatcacctg 3435

>ref|XM_001001700.1| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 3, transcript variant 4 (Lrch3),
            mRNA
          Length = 5918

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  tccatccccagcatcacctg 150
            ||||||||||||||||||||
Sbjct: 3715 tccatccccagcatcacctg 3734

>ref|XM_924306.2| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 3, transcript variant 9 (Lrch3),
            mRNA
          Length = 5619

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  tccatccccagcatcacctg 150
            ||||||||||||||||||||
Sbjct: 3416 tccatccccagcatcacctg 3435

>ref|XM_916555.2| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 3, transcript variant 8 (Lrch3),
            mRNA
          Length = 5918

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  tccatccccagcatcacctg 150
            ||||||||||||||||||||
Sbjct: 3715 tccatccccagcatcacctg 3734

>ref|XM_901489.2| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 3, transcript variant 2 (Lrch3),
            mRNA
          Length = 5619

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  tccatccccagcatcacctg 150
            ||||||||||||||||||||
Sbjct: 3416 tccatccccagcatcacctg 3435

>ref|XM_619388.3| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 3, transcript variant 1 (Lrch3),
            mRNA
          Length = 5918

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  tccatccccagcatcacctg 150
            ||||||||||||||||||||
Sbjct: 3715 tccatccccagcatcacctg 3734

>dbj|AK134026.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830411K09 product:similar to Neuronal
            protein [Felis silvestris catus], full insert sequence
          Length = 4129

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  tccatccccagcatcacctg 150
            ||||||||||||||||||||
Sbjct: 2346 tccatccccagcatcacctg 2365

>gb|AC007743.3| Homo sapiens BAC clone RP11-481J13 from 2, complete sequence
          Length = 141836

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     ttcatcttgacaacaagactttgt 75
              |||||||||| |||||||||||||
Sbjct: 107430 ttcatcttgaaaacaagactttgt 107407

>emb|BX005079.6| Zebrafish DNA sequence from clone CH211-176D9, complete sequence
          Length = 157845

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  gtcgtcgtagtagtcatcgt 204
            ||||||||||||||||||||
Sbjct: 3824 gtcgtcgtagtagtcatcgt 3805


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,681,605
Number of Sequences: 3902068
Number of extensions: 1681605
Number of successful extensions: 131559
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131527
Number of HSP's gapped (non-prelim): 32
length of query: 204
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 182
effective length of database: 17,147,199,772
effective search space: 3120790358504
effective search space used: 3120790358504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)