| Clone Name | rbags3c11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA Length = 1159 Score = 660 bits (333), Expect = 0.0 Identities = 456/494 (92%), Gaps = 6/494 (1%) Strand = Plus / Minus Query: 20 agtgtggctcaacggacaggcactacaccgaccaaagacaaaattcctcaggaatgaaac 79 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1076 agtgtggctcaacggacaggcactacaccgagcaaagacaaaattcctcaggaatgaaac 1017 Query: 80 acggcagttcttcaaatctaacagactgcgacaacgcgcccaaggcgtgtgaagtatttg 139 ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||| | Sbjct: 1016 acggcagttcttcaaatctaacagactgcaacaacgggcccaagggctgtgaagtatt-g 958 Query: 140 tcaaatcgccacgattccatccgaaaccgaggaacacccctga----gagttcagaaaag 195 |||| |||| ||||| |||||||||||||||||||||||||| ||| | ||| ||| Sbjct: 957 tcaacccgccccgatttcatccgaaaccgaggaacacccctgactgagagcttagagaag 898 Query: 196 agagggcttgatttcgccatcaaggcttgagagcaatcgcaatgccgaccttcgagctct 255 | |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 897 gg-gggcttgattccgcaatcaaggcttgagagcaatagcaatgccgaccttcgagctct 839 Query: 256 tctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctgaact 315 |||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct: 838 tctcgatggccttggtgtccacctccgccgagatggtgcacagcgactttggcatgaact 779 Query: 316 cgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagggtga 375 ||||||||||||||||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 778 cgtgctggatcagcgcgctggccttgccagagttgttgatccgggccttcacaagggtga 719 Query: 376 gcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagctgt 435 ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 718 gcgggtccagggtatgctgggtgccgaaggtgaggctgttctcgttgcttgagaagctgt 659 Query: 436 gggtcagctccgccccaacagctgtgctggacttctccacaaagtggtaataggatgcgg 495 |||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||| | Sbjct: 658 gggtcagctctgccccaacagctgtgccggatttctccacaatgtggtaataggatgcag 599 Query: 496 tgaggctgtctccc 509 | |||||||||||| Sbjct: 598 tcaggctgtctccc 585
>ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 222 bits (112), Expect = 9e-55 Identities = 214/248 (86%) Strand = Plus / Minus Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856 Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796 Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 736 Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 735 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 676 Query: 454 cagctgtg 461 |||||||| Sbjct: 675 cagctgtg 668
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 222 bits (112), Expect = 9e-55 Identities = 214/248 (86%) Strand = Plus / Minus Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 11754957 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 11754898 Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 11754897 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 11754838 Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 11754837 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 11754778 Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 11754777 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 11754718 Query: 454 cagctgtg 461 |||||||| Sbjct: 11754717 cagctgtg 11754710
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 222 bits (112), Expect = 9e-55 Identities = 214/248 (86%) Strand = Plus / Minus Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 189591 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 189532 Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 189531 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 189472 Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 189471 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 189412 Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 189411 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 189352 Query: 454 cagctgtg 461 |||||||| Sbjct: 189351 cagctgtg 189344
>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel Length = 1093 Score = 222 bits (112), Expect = 9e-55 Identities = 214/248 (86%) Strand = Plus / Minus Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 852 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 793 Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 792 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 733 Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 732 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 673 Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 672 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 613 Query: 454 cagctgtg 461 |||||||| Sbjct: 612 cagctgtg 605
>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full insert sequence Length = 3071 Score = 222 bits (112), Expect = 9e-55 Identities = 214/248 (86%) Strand = Plus / Minus Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 2862 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 2803 Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 2802 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 2743 Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 2742 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 2683 Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 2682 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 2623 Query: 454 cagctgtg 461 |||||||| Sbjct: 2622 cagctgtg 2615
>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full insert sequence Length = 1125 Score = 222 bits (112), Expect = 9e-55 Identities = 214/248 (86%) Strand = Plus / Minus Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856 Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796 Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 736 Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 735 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 676 Query: 454 cagctgtg 461 |||||||| Sbjct: 675 cagctgtg 668
>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full insert sequence Length = 1242 Score = 222 bits (112), Expect = 9e-55 Identities = 214/248 (86%) Strand = Plus / Minus Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 929 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 870 Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 869 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 810 Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 809 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 750 Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 749 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 690 Query: 454 cagctgtg 461 |||||||| Sbjct: 689 cagctgtg 682
>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1179 Score = 182 bits (92), Expect = 7e-43 Identities = 194/228 (85%) Strand = Plus / Minus Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293 ||||| || |||||||||||||||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 904 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 845 Query: 294 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353 |||||||| ||||| |||||||||||||||| || || ||||||||||||||||| Sbjct: 844 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 785 Query: 354 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413 ||||| ||||||| || ||| || ||||| |||| ||||| ||| ||||||||| || Sbjct: 784 atgcgggccttcaagacggttagtgggtccagggcgtgctgcccgccaaaggtgagggtg 725 Query: 414 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461 || || ||| |||||||||||||||| ||||| ||||||||||||||| Sbjct: 724 ttttcattggtcgagaagctgtgggtaagctctgccccaacagctgtg 677
>gb|AY104870.1| Zea mays PCO081914 mRNA sequence Length = 1445 Score = 182 bits (92), Expect = 7e-43 Identities = 194/228 (85%) Strand = Plus / Minus Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293 ||||| || |||||||||||||||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 1015 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 956 Query: 294 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353 |||||||| ||||| |||||||||||||||| || || ||||||||||||||||| Sbjct: 955 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 896 Query: 354 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413 ||||| ||||||| || ||| || ||||| |||| ||||| ||| ||||||||| || Sbjct: 895 atgcgggccttcaagacggttagtgggtccagggcgtgctgcccgccaaaggtgagggtg 836 Query: 414 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461 || || ||| |||||||||||||||| ||||| ||||||||||||||| Sbjct: 835 ttttcattggtcgagaagctgtgggtaagctctgccccaacagctgtg 788
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence Length = 1330 Score = 167 bits (84), Expect = 4e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293 ||||| |||||||||||||||||||| |||| ||| || || ||||| |||||||||||| Sbjct: 964 gcaattccgaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 905 Query: 294 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353 |||||||| ||||| |||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 904 accagcgactttggcctccactcatgctggatcagggcgctggctttgccagagttgttg 845 Query: 354 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413 ||||| ||||||| || ||| || ||||| || || ||||| ||| ||||||||| || Sbjct: 844 atgcgtgccttcaagacggttagtgggtccagagtgtgctgcccgccaaaggtgagggtg 785 Query: 414 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461 || || ||| ||||||| |||||||| ||||| ||||||||||||||| Sbjct: 784 ttttcattggtcgagaaactgtgggtaagctctgccccaacagctgtg 737
>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence Length = 1209 Score = 151 bits (76), Expect = 3e-33 Identities = 190/228 (83%) Strand = Plus / Plus Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293 ||||| || |||||||||||||||||||||| ||| | ||| ||||| |||||||||| | Sbjct: 289 gcaatcccaaccttcgagctcttctcgatgggctttgggtcgacctcggccgagatgggg 348 Query: 294 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353 |||||||| ||||| |||||||||||||||| || || ||||||||||||||||| Sbjct: 349 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 408 Query: 354 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413 ||||| ||||||| || || || ||||| |||| ||||| ||| |||| |||| || Sbjct: 409 atgcgggccttcaagacgggtagggggtccagggcgtgctgcccgccaaaggggagggtg 468 Query: 414 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461 || || ||| |||||||||||||||| ||||| ||||||||||||||| Sbjct: 469 ttttcattggtcgagaagctgtgggtaagctctgccccaacagctgtg 516
>ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 815 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 756 Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 755 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 696 Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 695 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 636 Query: 423 ctcgagaagctgtgggtcagctccgccccaacagc 457 |||||||||||||| | |||||| || |||||||| Sbjct: 635 ctcgagaagctgtgagccagctctgctccaacagc 601
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 69046 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 68987 Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 68986 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 68927 Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 68926 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 68867 Query: 423 ctcgagaagctgtgggtcagctccgccccaacagc 457 |||||||||||||| | |||||| || |||||||| Sbjct: 68866 ctcgagaagctgtgagccagctctgctccaacagc 68832
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 26424355 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 26424296 Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 26424295 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 26424236 Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 26424235 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 26424176 Query: 423 ctcgagaagctgtgggtcagctccgccccaacagc 457 |||||||||||||| | |||||| || |||||||| Sbjct: 26424175 ctcgagaagctgtgagccagctctgctccaacagc 26424141
>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene) Length = 1189 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 854 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 795 Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 794 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 735 Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 734 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 675 Query: 423 ctcgagaagctgtgggtcagctccgccccaacagc 457 |||||||||||||| | |||||| || |||||||| Sbjct: 674 ctcgagaagctgtgagccagctctgctccaacagc 640
>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full insert sequence Length = 1231 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 898 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 839 Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 838 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 779 Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 778 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 719 Query: 423 ctcgagaagctgtgggtcagctccgccccaacagc 457 |||||||||||||| | |||||| || |||||||| Sbjct: 718 ctcgagaagctgtgagccagctctgctccaacagc 684
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1175 Score = 143 bits (72), Expect = 6e-31 Identities = 189/228 (82%) Strand = Plus / Minus Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293 ||||| || ||||||||||||||||| |||| ||| || || ||||| |||||||||||| Sbjct: 959 gcaattccaaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 900 Query: 294 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353 |||||||| ||||| |||| ||||||||||| |||| || ||||| ||||||||| Sbjct: 899 accagcgactttggcctccactcatgctggatcaggacgctggctttgcccgagttgttg 840 Query: 354 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413 ||||| ||||||| || ||| || ||||| || || ||||| ||| ||||||||| || Sbjct: 839 atgcgtgccttcaagacggttagtgggtccagagtgtgctgcccgccaaaggtgagggtg 780 Query: 414 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461 || || ||| ||||||| |||||||| ||||| ||||||||||||||| Sbjct: 779 ttttcattggtcgagaaactgtgggtaagctctgccccaacagctgtg 732
>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1129 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Minus Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302 ||||| |||||||||||||||||||||||||||||||||| ||||||||| || ||| Sbjct: 889 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 830 Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362 || ||||| ||||||| |||||||| || |||||| |||| ||||||||| ||| ||| Sbjct: 829 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 770 Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422 ||||| ||| || ||||| |||| |||||| || || ||||||| | ||||| ||||| Sbjct: 769 ttcacagtggtcagagggtccagggcatgctgcgtcccaaaggtgatggtgttcccgttg 710 Query: 423 ctcgagaagctgtgggtcag 442 |||||||||||||| |||| Sbjct: 709 gtcgagaagctgtggctcag 690
>gb|AY104198.1| Zea mays PCO099812 mRNA sequence Length = 1156 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Minus Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302 ||||| |||||||||||||||||||||||||||||||||| ||||||||| || ||| Sbjct: 923 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 864 Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362 || ||||| ||||||| |||||||| || |||||| |||| ||||||||| ||| ||| Sbjct: 863 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 804 Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422 ||||| ||| || ||||| |||| |||||| || || ||||||| | ||||| ||||| Sbjct: 803 ttcacagtggtcagagggtccagggcatgctgcgtcccaaaggtgatggtgttcccgttg 744 Query: 423 ctcgagaagctgtgggtcag 442 |||||||||||||| |||| Sbjct: 743 gtcgagaagctgtggctcag 724
>ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 73.8 bits (37), Expect = 5e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 313 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 372 ||||||||||||| || ||||| || |||| ||||||| ||| ||||||||| | Sbjct: 856 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 797 Query: 373 tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 432 |||| ||||| |||| ||||| | |||||| ||||| ||||||| ||| ||||||||| Sbjct: 796 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 737 Query: 433 tgtgggtcagctccgccccaacagc 457 |||||||||||||||| ||| |||| Sbjct: 736 tgtgggtcagctccgctccagcagc 712
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 5e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 313 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 372 ||||||||||||| || ||||| || |||| ||||||| ||| ||||||||| | Sbjct: 29763836 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 29763895 Query: 373 tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 432 |||| ||||| |||| ||||| | |||||| ||||| ||||||| ||| ||||||||| Sbjct: 29763896 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 29763955 Query: 433 tgtgggtcagctccgccccaacagc 457 |||||||||||||||| ||| |||| Sbjct: 29763956 tgtgggtcagctccgctccagcagc 29763980 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 22904687 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 22904746 Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 22904747 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 22904806 Query: 366 ac 367 || Sbjct: 22904807 ac 22904808
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 73.8 bits (37), Expect = 5e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 313 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 372 ||||||||||||| || ||||| || |||| ||||||| ||| ||||||||| | Sbjct: 7931 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 7990 Query: 373 tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 432 |||| ||||| |||| ||||| | |||||| ||||| ||||||| ||| ||||||||| Sbjct: 7991 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 8050 Query: 433 tgtgggtcagctccgccccaacagc 457 |||||||||||||||| ||| |||| Sbjct: 8051 tgtgggtcagctccgctccagcagc 8075
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 73.8 bits (37), Expect = 5e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 313 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 372 ||||||||||||| || ||||| || |||| ||||||| ||| ||||||||| | Sbjct: 93567 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 93626 Query: 373 tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 432 |||| ||||| |||| ||||| | |||||| ||||| ||||||| ||| ||||||||| Sbjct: 93627 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 93686 Query: 433 tgtgggtcagctccgccccaacagc 457 |||||||||||||||| ||| |||| Sbjct: 93687 tgtgggtcagctccgctccagcagc 93711
>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds Length = 1203 Score = 60.0 bits (30), Expect = 7e-06 Identities = 162/206 (78%) Strand = Plus / Minus Query: 252 ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 311 ||||| || |||||||||||||| |||||| | |||||||| ||| ||||| || | Sbjct: 873 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 814 Query: 312 aactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagg 371 ||||||||||||| || || ||||||||||| ||||||||| ||||| |||| | Sbjct: 813 cactcgtgctggatgagagcacttgccttgccgaagttgttgacacgagctttcaatgtg 754 Query: 372 gtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaag 431 || | ||||| | | |||||| ||||| | ||||||| ||||||| || | ||||| Sbjct: 753 gtcaatgggtccaatgcatgctgggtgccaagggtgagggtgttctcattagttgagaac 694 Query: 432 ctgtgggtcagctccgccccaacagc 457 |||||||||| ||| ||||||||||| Sbjct: 693 ctgtgggtcacctcagccccaacagc 668
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 60.0 bits (30), Expect = 7e-06 Identities = 162/206 (78%) Strand = Plus / Plus Query: 252 ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 311 ||||| || |||||||||||||| |||||| | |||||||| ||| ||||| || | Sbjct: 119488 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 119547 Query: 312 aactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagg 371 ||||||||||||| || || ||||||||||| ||||||||| ||||| |||| | Sbjct: 119548 cactcgtgctggatgagagcacttgccttgccgaagttgttgacacgagctttcaatgtg 119607 Query: 372 gtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaag 431 || | ||||| | | |||||| ||||| | ||||||| ||||||| || | ||||| Sbjct: 119608 gtcaatgggtccaatgcatgctgggtgccaagggtgagggtgttctcattagttgagaac 119667 Query: 432 ctgtgggtcagctccgccccaacagc 457 |||||||||| ||| ||||||||||| Sbjct: 119668 ctgtgggtcacctcagccccaacagc 119693
>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b, complete sequence Length = 54022 Score = 60.0 bits (30), Expect = 7e-06 Identities = 162/206 (78%) Strand = Plus / Minus Query: 252 ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 311 ||||| || |||||||||||||| |||||| | |||||||| ||| ||||| || | Sbjct: 8730 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 8671 Query: 312 aactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagg 371 ||||||||||||| || || ||||||||||| ||||||||| ||||| |||| | Sbjct: 8670 cactcgtgctggatgagagcacttgccttgccgaagttgttgacacgagctttcaatgtg 8611 Query: 372 gtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaag 431 || | ||||| | | |||||| ||||| | ||||||| ||||||| || | ||||| Sbjct: 8610 gtcaatgggtccaatgcatgctgggtgccaagggtgagggtgttctcattagttgagaac 8551 Query: 432 ctgtgggtcagctccgccccaacagc 457 |||||||||| ||| ||||||||||| Sbjct: 8550 ctgtgggtcacctcagccccaacagc 8525
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel Length = 1174 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 251 gctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcct 310 ||||||||| |||||||||||||| ||||| | |||| |||| ||| ||||| ||||| Sbjct: 786 gctcttctcaatggccttggtgtcaacctcggtggagaaggtgatgagagacttgggcct 727 Query: 311 gaactcgtgctggatcagcgcgcttgc 337 || |||||||||| ||||| ||||| Sbjct: 726 ccacgcgtgctggatgagcgcacttgc 700 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 412 tgttctcgttgctcgagaagctgtg 436 ||||||||||||| ||||||||||| Sbjct: 625 tgttctcgttgcttgagaagctgtg 601
>gb|U50900.1|SOU50900 Spinacia oleracea voltage-dependent anion channel protein (SVDAC1) mRNA, complete cds Length = 1180 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 423 ctcgagaagctgtgggtcagctccgccccaacagctgtg 461 ||||||||||||||| ||| |||||| |||||||||||| Sbjct: 687 ctcgagaagctgtggctcaactccgcgccaacagctgtg 649
>ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 797 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 738 Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 737 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 678 Query: 366 ac 367 || Sbjct: 677 ac 676
>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence Length = 1133 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 412 tgttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461 ||||||| ||||| ||||||||||| |||| ||| || |||||||||||| Sbjct: 709 tgttctcattgcttgagaagctgtgagtcaactctgcaccaacagctgtg 660
>gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete sequence Length = 131563 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 313 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttca 366 ||||||||||||| || || ||||||||| | |||||| |||||||| |||||| Sbjct: 72077 actcgtgctggataagggcacttgccttggctgagttggtgatgcgacccttca 72130
>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI Length = 1030 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 412 tgttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461 ||||||| ||||| ||||||||||| |||| ||| || |||||||||||| Sbjct: 637 tgttctcattgcttgagaagctgtgagtcaactctgcaccaacagctgtg 588
>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII Length = 1060 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 412 tgttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461 ||||||| ||||| ||||||||||| |||| ||| || |||||||||||| Sbjct: 677 tgttctcattgcttgagaagctgtgagtcaactctgcaccaacagctgtg 628
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 108244 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 108303 Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 108304 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 108363 Query: 366 ac 367 || Sbjct: 108364 ac 108365
>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene) Length = 1148 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 870 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 811 Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 810 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 751 Query: 366 ac 367 || Sbjct: 750 ac 749
>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full insert sequence Length = 1151 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 875 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 816 Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 815 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 756 Query: 366 ac 367 || Sbjct: 755 ac 754
>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full insert sequence Length = 1160 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 886 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 827 Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 826 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 767 Query: 366 ac 367 || Sbjct: 766 ac 765
>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full insert sequence Length = 1216 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 930 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 871 Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 870 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 811 Query: 366 ac 367 || Sbjct: 810 ac 809
>gb|AY316738.1| Lotus corniculatus var. japonicus VDAC1.2 mRNA, complete cds Length = 1103 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Minus Query: 313 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcac 367 |||| |||||||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 760 actcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcac 706
>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391, complete sequence Length = 98505 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Minus Query: 313 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcac 367 |||| |||||||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 30950 actcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcac 30896
>dbj|AB033632.1| Meriones unguiculatus TP53 mRNA for p53, complete cds Length = 1173 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 430 agctgtgggtcagctccgcccca 452 ||||||||||||||||||||||| Sbjct: 410 agctgtgggtcagctccgcccca 432
>gb|AC108726.9| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 36019 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 gagttcagaaaagagagggct 203 ||||||||||||||||||||| Sbjct: 24224 gagttcagaaaagagagggct 24244
>gb|AF411849.1|AF411849S1 Homo sapiens USH3 region, partial sequence Length = 198334 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 gagttcagaaaagagagggct 203 ||||||||||||||||||||| Sbjct: 92910 gagttcagaaaagagagggct 92930
>gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-dependent anion-selective channel mRNA, complete cds; nuclear gene for mitochondrial product Length = 831 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 252 ctcttctcgatggccttggtgtccacctc 280 |||||||| |||||||||||||| ||||| Sbjct: 794 ctcttctcaatggccttggtgtctacctc 766
>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence Length = 213387 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 ggacttctccacaaagtggt 483 |||||||||||||||||||| Sbjct: 55313 ggacttctccacaaagtggt 55294
>gb|BC070001.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:85606 IMAGE:6963958), complete cds Length = 2881 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 755 agatggtgcagagcgacttc 774
>gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence Length = 1095 Score = 40.1 bits (20), Expect = 6.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 390 tgctgagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgcc 449 |||||||| || | ||||| | ||||||| ||| | ||||||||||| ||| ||| ||| Sbjct: 705 tgctgagtacccacggtgatgatgttctcattggtagagaagctgtgattcacctcagcc 646 Query: 450 ccaacagc 457 |||||||| Sbjct: 645 ccaacagc 638
>gb|BC058318.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:65765 IMAGE:6801552), complete cds Length = 2899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 724 agatggtgcagagcgacttc 743
>gb|BC044354.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:55267 IMAGE:3818319), complete cds Length = 2285 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 789 agatggtgcagagcgacttc 808
>ref|NM_131150.1| Danio rerio POU domain gene 12 (pou12), mRNA Length = 2189 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 709 agatggtgcagagcgacttc 728
>gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, complete sequence Length = 210347 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 caggaatgaaacacggcagttctt 91 ||||||||||||| |||||||||| Sbjct: 85919 caggaatgaaacaaggcagttctt 85942
>ref|XM_541501.2| PREDICTED: Canis familiaris similar to Sarcoplasmic reticulum histidine-rich calcium-binding protein precursor (LOC484386), mRNA Length = 2344 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 tcttctcgatggccttggtgtcca 276 ||||||| |||||||||||||||| Sbjct: 1083 tcttctccatggccttggtgtcca 1060
>emb|AL158209.23| Human DNA sequence from clone RP11-275N1 on chromosome 10 Contains a novel gene and a pseudogene similar to part of FLJ10581, complete sequence Length = 132327 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tgagagttcagaaaagagag 199 |||||||||||||||||||| Sbjct: 29185 tgagagttcagaaaagagag 29166
>gb|AC161188.5| Mus musculus chromosome 8, clone RP23-227D17, complete sequence Length = 143672 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 ggacttctccacaaagtggt 483 |||||||||||||||||||| Sbjct: 93295 ggacttctccacaaagtggt 93276
>emb|Y07906.1|DRZP12POU D.rerio mRNA for zp-12 POU gene, splice variant (postsomitogenesis, 20-28 hpf) Length = 2994 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 751 agatggtgcagagcgacttc 770
>gb|BC065961.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:76858 IMAGE:6969114), complete cds Length = 2762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 749 agatggtgcagagcgacttc 768
>emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 strain 129/Sv, complete sequence Length = 165525 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 aaacacggcagttcttcaaatcta 99 ||||||||||| |||||||||||| Sbjct: 66822 aaacacggcagctcttcaaatcta 66799
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gcttgatttcgccatcaagg 220 |||||||||||||||||||| Sbjct: 676426 gcttgatttcgccatcaagg 676445
>emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in linkage group 9, complete sequence Length = 160823 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 89510 agatggtgcagagcgacttc 89529
>gb|U43898.2|DRU43898 Danio rerio alternatively spliced brn-1.1 protein variant (brn-1.1) mRNA, partial cds Length = 1326 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 143 agatggtgcagagcgacttc 162
>gb|AF039952.1|AF039952 Danio rerio type III POU domain protein (zp-12) mRNA, complete cds Length = 2189 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 709 agatggtgcagagcgacttc 728
>gb|U77736.1|DRU77736 Danio rerio class III POU domain protein (taichi) gene, complete cds Length = 1979 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agatggtgcagagcgacttc 305 |||||||||||||||||||| Sbjct: 251 agatggtgcagagcgacttc 270
>gb|U79765.1|MCU79765 Mesembryanthemum crystallinum voltage-dependent anion-selective channel protein porin (VDAC) mRNA, complete cds Length = 1210 Score = 40.1 bits (20), Expect = 6.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 254 cttctcgatggccttggtgtccacctccgccgagatggtg 293 |||||| |||||||||||||| ||||| || |||| |||| Sbjct: 860 cttctcaatggccttggtgtcaacctcagcagagaaggtg 821
>emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chromosome 2, complete sequence Length = 180252 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 aaacacggcagttcttcaaatcta 99 ||||||||||| |||||||||||| Sbjct: 137881 aaacacggcagctcttcaaatcta 137904 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,394,928 Number of Sequences: 3902068 Number of extensions: 3394928 Number of successful extensions: 56148 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55942 Number of HSP's gapped (non-prelim): 200 length of query: 509 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 487 effective length of database: 17,147,199,772 effective search space: 8350686288964 effective search space used: 8350686288964 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)