ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA 660 0.0
2ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA 222 9e-55
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
4dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
5emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent an... 222 9e-55
6dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
7dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
8dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
9gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel ... 182 7e-43
10gb|AY104870.1| Zea mays PCO081914 mRNA sequence 182 7e-43
11gb|BT016491.1| Zea mays clone Contig324 mRNA sequence 167 4e-38
12gb|BT016888.1| Zea mays clone Contig721 mRNA sequence 151 3e-33
13ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predic... 149 1e-32
14gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
16emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent... 149 1e-32
17dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
18gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel ... 143 6e-31
19gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel ... 135 2e-28
20gb|AY104198.1| Zea mays PCO099812 mRNA sequence 135 2e-28
21ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predic... 74 5e-10
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
23dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
24dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
25gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, c... 60 7e-06
26dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone... 60 7e-06
27dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone... 60 7e-06
28emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent... 54 5e-04
29gb|U50900.1|SOU50900 Spinacia oleracea voltage-dependent anion c... 54 5e-04
30ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
31gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence 52 0.002
32gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete s... 52 0.002
33emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI 52 0.002
34emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII 52 0.002
35dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
36emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent... 52 0.002
37dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
38dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
39dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
40gb|AY316738.1| Lotus corniculatus var. japonicus VDAC1.2 mRNA, c... 46 0.11
41dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone... 46 0.11
42dbj|AB033632.1| Meriones unguiculatus TP53 mRNA for p53, complet... 46 0.11
43gb|AC108726.9| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Canc... 42 1.7
44gb|AF411849.1|AF411849S1 Homo sapiens USH3 region, partial sequence 42 1.7
45gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-depend... 42 1.7
46gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, comp... 40 6.9
47gb|BC070001.1| Danio rerio POU domain gene 12, mRNA (cDNA clone ... 40 6.9
48gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence 40 6.9
49gb|BC058318.1| Danio rerio POU domain gene 12, mRNA (cDNA clone ... 40 6.9
50gb|BC044354.1| Danio rerio POU domain gene 12, mRNA (cDNA clone ... 40 6.9
51ref|NM_131150.1| Danio rerio POU domain gene 12 (pou12), mRNA 40 6.9
52gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, comp... 40 6.9
53ref|XM_541501.2| PREDICTED: Canis familiaris similar to Sarcopla... 40 6.9
54emb|AL158209.23| Human DNA sequence from clone RP11-275N1 on chr... 40 6.9
55gb|AC161188.5| Mus musculus chromosome 8, clone RP23-227D17, com... 40 6.9
56emb|Y07906.1|DRZP12POU D.rerio mRNA for zp-12 POU gene, splice v... 40 6.9
57gb|BC065961.1| Danio rerio POU domain gene 12, mRNA (cDNA clone ... 40 6.9
58emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 s... 40 6.9
59gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.9
60emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in... 40 6.9
61gb|U43898.2|DRU43898 Danio rerio alternatively spliced brn-1.1 p... 40 6.9
62gb|AF039952.1|AF039952 Danio rerio type III POU domain protein (... 40 6.9
63gb|U77736.1|DRU77736 Danio rerio class III POU domain protein (t... 40 6.9
64gb|U79765.1|MCU79765 Mesembryanthemum crystallinum voltage-depen... 40 6.9
65emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chr... 40 6.9

>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA
          Length = 1159

 Score =  660 bits (333), Expect = 0.0
 Identities = 456/494 (92%), Gaps = 6/494 (1%)
 Strand = Plus / Minus

                                                                        
Query: 20   agtgtggctcaacggacaggcactacaccgaccaaagacaaaattcctcaggaatgaaac 79
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1076 agtgtggctcaacggacaggcactacaccgagcaaagacaaaattcctcaggaatgaaac 1017

                                                                        
Query: 80   acggcagttcttcaaatctaacagactgcgacaacgcgcccaaggcgtgtgaagtatttg 139
            ||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||| |
Sbjct: 1016 acggcagttcttcaaatctaacagactgcaacaacgggcccaagggctgtgaagtatt-g 958

                                                                        
Query: 140  tcaaatcgccacgattccatccgaaaccgaggaacacccctga----gagttcagaaaag 195
            ||||  |||| ||||| ||||||||||||||||||||||||||    ||| | ||| |||
Sbjct: 957  tcaacccgccccgatttcatccgaaaccgaggaacacccctgactgagagcttagagaag 898

                                                                        
Query: 196  agagggcttgatttcgccatcaaggcttgagagcaatcgcaatgccgaccttcgagctct 255
             | |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 897  gg-gggcttgattccgcaatcaaggcttgagagcaatagcaatgccgaccttcgagctct 839

                                                                        
Query: 256  tctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctgaact 315
            |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 838  tctcgatggccttggtgtccacctccgccgagatggtgcacagcgactttggcatgaact 779

                                                                        
Query: 316  cgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagggtga 375
            ||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||||
Sbjct: 778  cgtgctggatcagcgcgctggccttgccagagttgttgatccgggccttcacaagggtga 719

                                                                        
Query: 376  gcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagctgt 435
            ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 718  gcgggtccagggtatgctgggtgccgaaggtgaggctgttctcgttgcttgagaagctgt 659

                                                                        
Query: 436  gggtcagctccgccccaacagctgtgctggacttctccacaaagtggtaataggatgcgg 495
            |||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||| |
Sbjct: 658  gggtcagctctgccccaacagctgtgccggatttctccacaatgtggtaataggatgcag 599

                          
Query: 496  tgaggctgtctccc 509
            | ||||||||||||
Sbjct: 598  tcaggctgtctccc 585



to top

>ref|XM_450604.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1124

 Score =  222 bits (112), Expect = 9e-55
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                       
Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856

                                                                       
Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333
           | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796

                                                                       
Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393
           | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || ||||
Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 736

                                                                       
Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453
           | || ||||||||||||  ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 735 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 676

                   
Query: 454 cagctgtg 461
           ||||||||
Sbjct: 675 cagctgtg 668



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  222 bits (112), Expect = 9e-55
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                            
Query: 214      atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
                ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 11754957 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 11754898

                                                                            
Query: 274      ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333
                | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 11754897 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 11754838

                                                                            
Query: 334      ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393
                | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || ||||
Sbjct: 11754837 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 11754778

                                                                            
Query: 394      gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453
                | || ||||||||||||  ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 11754777 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 11754718

                        
Query: 454      cagctgtg 461
                ||||||||
Sbjct: 11754717 cagctgtg 11754710



to top

>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score =  222 bits (112), Expect = 9e-55
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                          
Query: 214    atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
              ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 189591 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 189532

                                                                          
Query: 274    ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333
              | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 189531 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 189472

                                                                          
Query: 334    ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393
              | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || ||||
Sbjct: 189471 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 189412

                                                                          
Query: 394    gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453
              | || ||||||||||||  ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 189411 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 189352

                      
Query: 454    cagctgtg 461
              ||||||||
Sbjct: 189351 cagctgtg 189344



to top

>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel
          Length = 1093

 Score =  222 bits (112), Expect = 9e-55
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                       
Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 852 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 793

                                                                       
Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333
           | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 792 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 733

                                                                       
Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393
           | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || ||||
Sbjct: 732 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 673

                                                                       
Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453
           | || ||||||||||||  ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 672 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 613

                   
Query: 454 cagctgtg 461
           ||||||||
Sbjct: 612 cagctgtg 605



to top

>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full
            insert sequence
          Length = 3071

 Score =  222 bits (112), Expect = 9e-55
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                        
Query: 214  atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
            ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 2862 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 2803

                                                                        
Query: 274  ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333
            | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 2802 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 2743

                                                                        
Query: 334  ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393
            | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || ||||
Sbjct: 2742 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 2683

                                                                        
Query: 394  gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453
            | || ||||||||||||  ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 2682 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 2623

                    
Query: 454  cagctgtg 461
            ||||||||
Sbjct: 2622 cagctgtg 2615



to top

>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full
           insert sequence
          Length = 1125

 Score =  222 bits (112), Expect = 9e-55
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                       
Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856

                                                                       
Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333
           | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796

                                                                       
Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393
           | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || ||||
Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 736

                                                                       
Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453
           | || ||||||||||||  ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 735 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 676

                   
Query: 454 cagctgtg 461
           ||||||||
Sbjct: 675 cagctgtg 668



to top

>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full
           insert sequence
          Length = 1242

 Score =  222 bits (112), Expect = 9e-55
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                       
Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 929 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 870

                                                                       
Query: 274 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 333
           | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 869 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 810

                                                                       
Query: 334 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 393
           | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || ||||
Sbjct: 809 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 750

                                                                       
Query: 394 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 453
           | || ||||||||||||  ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 749 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 690

                   
Query: 454 cagctgtg 461
           ||||||||
Sbjct: 689 cagctgtg 682



to top

>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1179

 Score =  182 bits (92), Expect = 7e-43
 Identities = 194/228 (85%)
 Strand = Plus / Minus

                                                                       
Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           ||||| || |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 904 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 845

                                                                       
Query: 294 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353
              |||||||| |||||  |||||||||||||||| || || ||||||||||||||||| 
Sbjct: 844 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 785

                                                                       
Query: 354 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413
           ||||| ||||||| || ||| || ||||| ||||  |||||   ||| ||||||||| ||
Sbjct: 784 atgcgggccttcaagacggttagtgggtccagggcgtgctgcccgccaaaggtgagggtg 725

                                                           
Query: 414 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461
           || || ||| |||||||||||||||| ||||| |||||||||||||||
Sbjct: 724 ttttcattggtcgagaagctgtgggtaagctctgccccaacagctgtg 677



to top

>gb|AY104870.1| Zea mays PCO081914 mRNA sequence
          Length = 1445

 Score =  182 bits (92), Expect = 7e-43
 Identities = 194/228 (85%)
 Strand = Plus / Minus

                                                                        
Query: 234  gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
            ||||| || |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 1015 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 956

                                                                        
Query: 294  cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353
               |||||||| |||||  |||||||||||||||| || || ||||||||||||||||| 
Sbjct: 955  accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 896

                                                                        
Query: 354  atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413
            ||||| ||||||| || ||| || ||||| ||||  |||||   ||| ||||||||| ||
Sbjct: 895  atgcgggccttcaagacggttagtgggtccagggcgtgctgcccgccaaaggtgagggtg 836

                                                            
Query: 414  ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461
            || || ||| |||||||||||||||| ||||| |||||||||||||||
Sbjct: 835  ttttcattggtcgagaagctgtgggtaagctctgccccaacagctgtg 788



to top

>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence
          Length = 1330

 Score =  167 bits (84), Expect = 4e-38
 Identities = 192/228 (84%)
 Strand = Plus / Minus

                                                                       
Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           ||||| |||||||||||||||||||| |||| ||| || || ||||| ||||||||||||
Sbjct: 964 gcaattccgaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 905

                                                                       
Query: 294 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353
              |||||||| |||||  |||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 904 accagcgactttggcctccactcatgctggatcagggcgctggctttgccagagttgttg 845

                                                                       
Query: 354 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413
           ||||| ||||||| || ||| || ||||| || || |||||   ||| ||||||||| ||
Sbjct: 844 atgcgtgccttcaagacggttagtgggtccagagtgtgctgcccgccaaaggtgagggtg 785

                                                           
Query: 414 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461
           || || ||| ||||||| |||||||| ||||| |||||||||||||||
Sbjct: 784 ttttcattggtcgagaaactgtgggtaagctctgccccaacagctgtg 737



to top

>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence
          Length = 1209

 Score =  151 bits (76), Expect = 3e-33
 Identities = 190/228 (83%)
 Strand = Plus / Plus

                                                                       
Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           ||||| || |||||||||||||||||||||| ||| | ||| ||||| |||||||||| |
Sbjct: 289 gcaatcccaaccttcgagctcttctcgatgggctttgggtcgacctcggccgagatgggg 348

                                                                       
Query: 294 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353
              |||||||| |||||  |||||||||||||||| || || ||||||||||||||||| 
Sbjct: 349 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 408

                                                                       
Query: 354 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413
           ||||| ||||||| || ||  || ||||| ||||  |||||   ||| |||| |||| ||
Sbjct: 409 atgcgggccttcaagacgggtagggggtccagggcgtgctgcccgccaaaggggagggtg 468

                                                           
Query: 414 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461
           || || ||| |||||||||||||||| ||||| |||||||||||||||
Sbjct: 469 ttttcattggtcgagaagctgtgggtaagctctgccccaacagctgtg 516



to top

>ref|XM_475771.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 843

 Score =  149 bits (75), Expect = 1e-32
 Identities = 180/215 (83%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302
           ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 815 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 756

                                                                       
Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362
           || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 755 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 696

                                                                       
Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422
           |||||    |||||    || |||| |||||| || |||||||||||  |||||||||||
Sbjct: 695 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 636

                                              
Query: 423 ctcgagaagctgtgggtcagctccgccccaacagc 457
           |||||||||||||| | |||||| || ||||||||
Sbjct: 635 ctcgagaagctgtgagccagctctgctccaacagc 601



to top

>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score =  149 bits (75), Expect = 1e-32
 Identities = 180/215 (83%)
 Strand = Plus / Minus

                                                                         
Query: 243   accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302
             ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 69046 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 68987

                                                                         
Query: 303   ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362
             || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 68986 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 68927

                                                                         
Query: 363   ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422
             |||||    |||||    || |||| |||||| || |||||||||||  |||||||||||
Sbjct: 68926 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 68867

                                                
Query: 423   ctcgagaagctgtgggtcagctccgccccaacagc 457
             |||||||||||||| | |||||| || ||||||||
Sbjct: 68866 ctcgagaagctgtgagccagctctgctccaacagc 68832



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  149 bits (75), Expect = 1e-32
 Identities = 180/215 (83%)
 Strand = Plus / Minus

                                                                            
Query: 243      accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302
                ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 26424355 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 26424296

                                                                            
Query: 303      ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362
                || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 26424295 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 26424236

                                                                            
Query: 363      ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422
                |||||    |||||    || |||| |||||| || |||||||||||  |||||||||||
Sbjct: 26424235 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 26424176

                                                   
Query: 423      ctcgagaagctgtgggtcagctccgccccaacagc 457
                |||||||||||||| | |||||| || ||||||||
Sbjct: 26424175 ctcgagaagctgtgagccagctctgctccaacagc 26424141



to top

>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene)
          Length = 1189

 Score =  149 bits (75), Expect = 1e-32
 Identities = 180/215 (83%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302
           ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 854 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 795

                                                                       
Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362
           || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 794 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 735

                                                                       
Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422
           |||||    |||||    || |||| |||||| || |||||||||||  |||||||||||
Sbjct: 734 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 675

                                              
Query: 423 ctcgagaagctgtgggtcagctccgccccaacagc 457
           |||||||||||||| | |||||| || ||||||||
Sbjct: 674 ctcgagaagctgtgagccagctctgctccaacagc 640



to top

>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full
           insert sequence
          Length = 1231

 Score =  149 bits (75), Expect = 1e-32
 Identities = 180/215 (83%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302
           ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 898 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 839

                                                                       
Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362
           || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 838 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 779

                                                                       
Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422
           |||||    |||||    || |||| |||||| || |||||||||||  |||||||||||
Sbjct: 778 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 719

                                              
Query: 423 ctcgagaagctgtgggtcagctccgccccaacagc 457
           |||||||||||||| | |||||| || ||||||||
Sbjct: 718 ctcgagaagctgtgagccagctctgctccaacagc 684



to top

>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1175

 Score =  143 bits (72), Expect = 6e-31
 Identities = 189/228 (82%)
 Strand = Plus / Minus

                                                                       
Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           ||||| || ||||||||||||||||| |||| ||| || || ||||| ||||||||||||
Sbjct: 959 gcaattccaaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 900

                                                                       
Query: 294 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 353
              |||||||| |||||  |||| |||||||||||  |||| || ||||| |||||||||
Sbjct: 899 accagcgactttggcctccactcatgctggatcaggacgctggctttgcccgagttgttg 840

                                                                       
Query: 354 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 413
           ||||| ||||||| || ||| || ||||| || || |||||   ||| ||||||||| ||
Sbjct: 839 atgcgtgccttcaagacggttagtgggtccagagtgtgctgcccgccaaaggtgagggtg 780

                                                           
Query: 414 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461
           || || ||| ||||||| |||||||| ||||| |||||||||||||||
Sbjct: 779 ttttcattggtcgagaaactgtgggtaagctctgccccaacagctgtg 732



to top

>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1129

 Score =  135 bits (68), Expect = 2e-28
 Identities = 167/200 (83%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302
           ||||| ||||||||||||||||||||||||||||||||||  |||||||||   || |||
Sbjct: 889 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 830

                                                                       
Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362
           || |||||  ||||||| |||||||| || |||||| ||||  ||||||||| ||| |||
Sbjct: 829 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 770

                                                                       
Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422
           |||||   ||| || ||||| |||| |||||| || || ||||||| | ||||| |||||
Sbjct: 769 ttcacagtggtcagagggtccagggcatgctgcgtcccaaaggtgatggtgttcccgttg 710

                               
Query: 423 ctcgagaagctgtgggtcag 442
            |||||||||||||| ||||
Sbjct: 709 gtcgagaagctgtggctcag 690



to top

>gb|AY104198.1| Zea mays PCO099812 mRNA sequence
          Length = 1156

 Score =  135 bits (68), Expect = 2e-28
 Identities = 167/200 (83%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 302
           ||||| ||||||||||||||||||||||||||||||||||  |||||||||   || |||
Sbjct: 923 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 864

                                                                       
Query: 303 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 362
           || |||||  ||||||| |||||||| || |||||| ||||  ||||||||| ||| |||
Sbjct: 863 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 804

                                                                       
Query: 363 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 422
           |||||   ||| || ||||| |||| |||||| || || ||||||| | ||||| |||||
Sbjct: 803 ttcacagtggtcagagggtccagggcatgctgcgtcccaaaggtgatggtgttcccgttg 744

                               
Query: 423 ctcgagaagctgtgggtcag 442
            |||||||||||||| ||||
Sbjct: 743 gtcgagaagctgtggctcag 724



to top

>ref|NM_191753.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 954

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 118/145 (81%)
 Strand = Plus / Minus

                                                                       
Query: 313 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 372
           ||||||||||||| || |||||  || ||||   |||||||  ||| |||||||||   |
Sbjct: 856 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 797

                                                                       
Query: 373 tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 432
           |||| ||||| ||||  |||||  | |||||| ||||| ||||||| ||| |||||||||
Sbjct: 796 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 737

                                    
Query: 433 tgtgggtcagctccgccccaacagc 457
           |||||||||||||||| ||| ||||
Sbjct: 736 tgtgggtcagctccgctccagcagc 712



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 118/145 (81%)
 Strand = Plus / Plus

                                                                            
Query: 313      actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 372
                ||||||||||||| || |||||  || ||||   |||||||  ||| |||||||||   |
Sbjct: 29763836 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 29763895

                                                                            
Query: 373      tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 432
                |||| ||||| ||||  |||||  | |||||| ||||| ||||||| ||| |||||||||
Sbjct: 29763896 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 29763955

                                         
Query: 433      tgtgggtcagctccgccccaacagc 457
                |||||||||||||||| ||| ||||
Sbjct: 29763956 tgtgggtcagctccgctccagcagc 29763980



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Plus

                                                                            
Query: 246      ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305
                |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 22904687 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 22904746

                                                                            
Query: 306      ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365
                || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 22904747 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 22904806

                  
Query: 366      ac 367
                ||
Sbjct: 22904807 ac 22904808



to top

>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0683B11
          Length = 155955

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 118/145 (81%)
 Strand = Plus / Plus

                                                                        
Query: 313  actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 372
            ||||||||||||| || |||||  || ||||   |||||||  ||| |||||||||   |
Sbjct: 7931 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 7990

                                                                        
Query: 373  tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 432
            |||| ||||| ||||  |||||  | |||||| ||||| ||||||| ||| |||||||||
Sbjct: 7991 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 8050

                                     
Query: 433  tgtgggtcagctccgccccaacagc 457
            |||||||||||||||| ||| ||||
Sbjct: 8051 tgtgggtcagctccgctccagcagc 8075



to top

>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131B07
          Length = 109135

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 118/145 (81%)
 Strand = Plus / Plus

                                                                         
Query: 313   actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 372
             ||||||||||||| || |||||  || ||||   |||||||  ||| |||||||||   |
Sbjct: 93567 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 93626

                                                                         
Query: 373   tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 432
             |||| ||||| ||||  |||||  | |||||| ||||| ||||||| ||| |||||||||
Sbjct: 93627 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 93686

                                      
Query: 433   tgtgggtcagctccgccccaacagc 457
             |||||||||||||||| ||| ||||
Sbjct: 93687 tgtgggtcagctccgctccagcagc 93711



to top

>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds
          Length = 1203

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 162/206 (78%)
 Strand = Plus / Minus

                                                                       
Query: 252 ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 311
           ||||| || |||||||||||||| |||||| | ||||||||  |||  ||||| || |  
Sbjct: 873 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 814

                                                                       
Query: 312 aactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagg 371
            ||||||||||||| || || |||||||||||  |||||||||  ||||| ||||    |
Sbjct: 813 cactcgtgctggatgagagcacttgccttgccgaagttgttgacacgagctttcaatgtg 754

                                                                       
Query: 372 gtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaag 431
           || |  ||||| |  | |||||| ||||| | ||||||| ||||||| ||  | ||||| 
Sbjct: 753 gtcaatgggtccaatgcatgctgggtgccaagggtgagggtgttctcattagttgagaac 694

                                     
Query: 432 ctgtgggtcagctccgccccaacagc 457
           |||||||||| ||| |||||||||||
Sbjct: 693 ctgtgggtcacctcagccccaacagc 668



to top

>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
              complete sequence
          Length = 123325

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 162/206 (78%)
 Strand = Plus / Plus

                                                                          
Query: 252    ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 311
              ||||| || |||||||||||||| |||||| | ||||||||  |||  ||||| || |  
Sbjct: 119488 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 119547

                                                                          
Query: 312    aactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagg 371
               ||||||||||||| || || |||||||||||  |||||||||  ||||| ||||    |
Sbjct: 119548 cactcgtgctggatgagagcacttgccttgccgaagttgttgacacgagctttcaatgtg 119607

                                                                          
Query: 372    gtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaag 431
              || |  ||||| |  | |||||| ||||| | ||||||| ||||||| ||  | ||||| 
Sbjct: 119608 gtcaatgggtccaatgcatgctgggtgccaagggtgagggtgttctcattagttgagaac 119667

                                        
Query: 432    ctgtgggtcagctccgccccaacagc 457
              |||||||||| ||| |||||||||||
Sbjct: 119668 ctgtgggtcacctcagccccaacagc 119693



to top

>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b,
            complete sequence
          Length = 54022

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 162/206 (78%)
 Strand = Plus / Minus

                                                                        
Query: 252  ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 311
            ||||| || |||||||||||||| |||||| | ||||||||  |||  ||||| || |  
Sbjct: 8730 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 8671

                                                                        
Query: 312  aactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagg 371
             ||||||||||||| || || |||||||||||  |||||||||  ||||| ||||    |
Sbjct: 8670 cactcgtgctggatgagagcacttgccttgccgaagttgttgacacgagctttcaatgtg 8611

                                                                        
Query: 372  gtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaag 431
            || |  ||||| |  | |||||| ||||| | ||||||| ||||||| ||  | ||||| 
Sbjct: 8610 gtcaatgggtccaatgcatgctgggtgccaagggtgagggtgttctcattagttgagaac 8551

                                      
Query: 432  ctgtgggtcagctccgccccaacagc 457
            |||||||||| ||| |||||||||||
Sbjct: 8550 ctgtgggtcacctcagccccaacagc 8525



to top

>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel
          Length = 1174

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                       
Query: 251 gctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcct 310
           ||||||||| |||||||||||||| ||||| |  |||| ||||  ||| ||||| |||||
Sbjct: 786 gctcttctcaatggccttggtgtcaacctcggtggagaaggtgatgagagacttgggcct 727

                                      
Query: 311 gaactcgtgctggatcagcgcgcttgc 337
             || |||||||||| ||||| |||||
Sbjct: 726 ccacgcgtgctggatgagcgcacttgc 700



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 412 tgttctcgttgctcgagaagctgtg 436
           ||||||||||||| |||||||||||
Sbjct: 625 tgttctcgttgcttgagaagctgtg 601



to top

>gb|U50900.1|SOU50900 Spinacia oleracea voltage-dependent anion channel protein (SVDAC1)
           mRNA, complete cds
          Length = 1180

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 423 ctcgagaagctgtgggtcagctccgccccaacagctgtg 461
           ||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 687 ctcgagaagctgtggctcaactccgcgccaacagctgtg 649



to top

>ref|NM_192554.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 797 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 738

                                                                       
Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 737 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 678

             
Query: 366 ac 367
           ||
Sbjct: 677 ac 676



to top

>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence
          Length = 1133

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 412 tgttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461
           ||||||| ||||| ||||||||||| |||| ||| || ||||||||||||
Sbjct: 709 tgttctcattgcttgagaagctgtgagtcaactctgcaccaacagctgtg 660



to top

>gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete sequence
          Length = 131563

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 313   actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttca 366
             ||||||||||||| || || ||||||||| | |||||| |||||||| ||||||
Sbjct: 72077 actcgtgctggataagggcacttgccttggctgagttggtgatgcgacccttca 72130



to top

>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI
          Length = 1030

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 412 tgttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461
           ||||||| ||||| ||||||||||| |||| ||| || ||||||||||||
Sbjct: 637 tgttctcattgcttgagaagctgtgagtcaactctgcaccaacagctgtg 588



to top

>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII
          Length = 1060

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 412 tgttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 461
           ||||||| ||||| ||||||||||| |||| ||| || ||||||||||||
Sbjct: 677 tgttctcattgcttgagaagctgtgagtcaactctgcaccaacagctgtg 628



to top

>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Plus

                                                                          
Query: 246    ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305
              |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 108244 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 108303

                                                                          
Query: 306    ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365
              || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 108304 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 108363

                
Query: 366    ac 367
              ||
Sbjct: 108364 ac 108365



to top

>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene)
          Length = 1148

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 870 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 811

                                                                       
Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 810 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 751

             
Query: 366 ac 367
           ||
Sbjct: 750 ac 749



to top

>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full
           insert sequence
          Length = 1151

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 875 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 816

                                                                       
Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 815 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 756

             
Query: 366 ac 367
           ||
Sbjct: 755 ac 754



to top

>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full
           insert sequence
          Length = 1160

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 886 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 827

                                                                       
Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 826 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 767

             
Query: 366 ac 367
           ||
Sbjct: 766 ac 765



to top

>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full
           insert sequence
          Length = 1216

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 305
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 930 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 871

                                                                       
Query: 306 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 365
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 870 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 811

             
Query: 366 ac 367
           ||
Sbjct: 810 ac 809



to top

>gb|AY316738.1| Lotus corniculatus var. japonicus VDAC1.2 mRNA, complete cds
          Length = 1103

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 313 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcac 367
           |||| |||||||| || ||  |||||||||||  |||||||| ||||||||||||
Sbjct: 760 actcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcac 706



to top

>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391,
             complete sequence
          Length = 98505

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 313   actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcac 367
             |||| |||||||| || ||  |||||||||||  |||||||| ||||||||||||
Sbjct: 30950 actcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcac 30896



to top

>dbj|AB033632.1| Meriones unguiculatus TP53 mRNA for p53, complete cds
          Length = 1173

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 430 agctgtgggtcagctccgcccca 452
           |||||||||||||||||||||||
Sbjct: 410 agctgtgggtcagctccgcccca 432



to top

>gb|AC108726.9| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 36019

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   gagttcagaaaagagagggct 203
             |||||||||||||||||||||
Sbjct: 24224 gagttcagaaaagagagggct 24244



to top

>gb|AF411849.1|AF411849S1 Homo sapiens USH3 region, partial sequence
          Length = 198334

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   gagttcagaaaagagagggct 203
             |||||||||||||||||||||
Sbjct: 92910 gagttcagaaaagagagggct 92930



to top

>gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-dependent
           anion-selective channel mRNA, complete cds; nuclear gene
           for mitochondrial product
          Length = 831

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 252 ctcttctcgatggccttggtgtccacctc 280
           |||||||| |||||||||||||| |||||
Sbjct: 794 ctcttctcaatggccttggtgtctacctc 766



to top

>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence
          Length = 213387

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   ggacttctccacaaagtggt 483
             ||||||||||||||||||||
Sbjct: 55313 ggacttctccacaaagtggt 55294



to top

>gb|BC070001.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:85606
           IMAGE:6963958), complete cds
          Length = 2881

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 agatggtgcagagcgacttc 305
           ||||||||||||||||||||
Sbjct: 755 agatggtgcagagcgacttc 774



to top

>gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence
          Length = 1095

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 390 tgctgagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgcc 449
           |||||||| || | ||||| | ||||||| ||| | |||||||||||  ||| ||| |||
Sbjct: 705 tgctgagtacccacggtgatgatgttctcattggtagagaagctgtgattcacctcagcc 646

                   
Query: 450 ccaacagc 457
           ||||||||
Sbjct: 645 ccaacagc 638



to top

>gb|BC058318.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:65765
           IMAGE:6801552), complete cds
          Length = 2899

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 agatggtgcagagcgacttc 305
           ||||||||||||||||||||
Sbjct: 724 agatggtgcagagcgacttc 743



to top

>gb|BC044354.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:55267
           IMAGE:3818319), complete cds
          Length = 2285

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 agatggtgcagagcgacttc 305
           ||||||||||||||||||||
Sbjct: 789 agatggtgcagagcgacttc 808



to top

>ref|NM_131150.1| Danio rerio POU domain gene 12 (pou12), mRNA
          Length = 2189

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 agatggtgcagagcgacttc 305
           ||||||||||||||||||||
Sbjct: 709 agatggtgcagagcgacttc 728



to top

>gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, complete sequence
          Length = 210347

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    caggaatgaaacacggcagttctt 91
             ||||||||||||| ||||||||||
Sbjct: 85919 caggaatgaaacaaggcagttctt 85942



to top

>ref|XM_541501.2| PREDICTED: Canis familiaris similar to Sarcoplasmic reticulum
            histidine-rich calcium-binding protein precursor
            (LOC484386), mRNA
          Length = 2344

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 253  tcttctcgatggccttggtgtcca 276
            ||||||| ||||||||||||||||
Sbjct: 1083 tcttctccatggccttggtgtcca 1060



to top

>emb|AL158209.23| Human DNA sequence from clone RP11-275N1 on chromosome 10 Contains a
             novel gene and a pseudogene similar to part of FLJ10581,
             complete sequence
          Length = 132327

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   tgagagttcagaaaagagag 199
             ||||||||||||||||||||
Sbjct: 29185 tgagagttcagaaaagagag 29166



to top

>gb|AC161188.5| Mus musculus chromosome 8, clone RP23-227D17, complete sequence
          Length = 143672

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   ggacttctccacaaagtggt 483
             ||||||||||||||||||||
Sbjct: 93295 ggacttctccacaaagtggt 93276



to top

>emb|Y07906.1|DRZP12POU D.rerio mRNA for zp-12 POU gene, splice variant (postsomitogenesis,
           20-28 hpf)
          Length = 2994

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 agatggtgcagagcgacttc 305
           ||||||||||||||||||||
Sbjct: 751 agatggtgcagagcgacttc 770



to top

>gb|BC065961.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:76858
           IMAGE:6969114), complete cds
          Length = 2762

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 agatggtgcagagcgacttc 305
           ||||||||||||||||||||
Sbjct: 749 agatggtgcagagcgacttc 768



to top

>emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 strain 129/Sv, complete
             sequence
          Length = 165525

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    aaacacggcagttcttcaaatcta 99
             ||||||||||| ||||||||||||
Sbjct: 66822 aaacacggcagctcttcaaatcta 66799



to top

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    gcttgatttcgccatcaagg 220
              ||||||||||||||||||||
Sbjct: 676426 gcttgatttcgccatcaagg 676445



to top

>emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in linkage group 9,
             complete sequence
          Length = 160823

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   agatggtgcagagcgacttc 305
             ||||||||||||||||||||
Sbjct: 89510 agatggtgcagagcgacttc 89529



to top

>gb|U43898.2|DRU43898 Danio rerio alternatively spliced brn-1.1 protein variant (brn-1.1)
           mRNA, partial cds
          Length = 1326

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 agatggtgcagagcgacttc 305
           ||||||||||||||||||||
Sbjct: 143 agatggtgcagagcgacttc 162



to top

>gb|AF039952.1|AF039952 Danio rerio type III POU domain protein (zp-12) mRNA, complete cds
          Length = 2189

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 agatggtgcagagcgacttc 305
           ||||||||||||||||||||
Sbjct: 709 agatggtgcagagcgacttc 728



to top

>gb|U77736.1|DRU77736 Danio rerio class III POU domain protein (taichi) gene, complete
           cds
          Length = 1979

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 agatggtgcagagcgacttc 305
           ||||||||||||||||||||
Sbjct: 251 agatggtgcagagcgacttc 270



to top

>gb|U79765.1|MCU79765 Mesembryanthemum crystallinum voltage-dependent anion-selective
           channel protein porin (VDAC) mRNA, complete cds
          Length = 1210

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 254 cttctcgatggccttggtgtccacctccgccgagatggtg 293
           |||||| |||||||||||||| ||||| || |||| ||||
Sbjct: 860 cttctcaatggccttggtgtcaacctcagcagagaaggtg 821



to top

>emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chromosome 2, complete
              sequence
          Length = 180252

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     aaacacggcagttcttcaaatcta 99
              ||||||||||| ||||||||||||
Sbjct: 137881 aaacacggcagctcttcaaatcta 137904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,394,928
Number of Sequences: 3902068
Number of extensions: 3394928
Number of successful extensions: 56148
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55942
Number of HSP's gapped (non-prelim): 200
length of query: 509
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 487
effective length of database: 17,147,199,772
effective search space: 8350686288964
effective search space used: 8350686288964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top