>gb|AF230786.1|AF230786 Hordeum vulgare human tumor protein-like protein mRNA, complete cds
          Length = 778

 Score =  394 bits (199), Expect = e-107
 Identities = 199/199 (100%)
 Strand = Plus / Minus

                                                                       
Query: 30  caaccacacaaatttcacgattaccattacaaagcaaatcccatgattatcacaaagttt 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 caaccacacaaatttcacgattaccattacaaagcaaatcccatgattatcacaaagttt 708

                                                                       
Query: 90  tcaagatactcaacatctgatagttactgacacaagcattggagagtcgactgacaacca 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tcaagatactcaacatctgatagttactgacacaagcattggagagtcgactgacaacca 648

                                                                       
Query: 150 tagagcagagcaaaaatactgacgaccacatagatattagcatacagtgcgattagcact 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tagagcagagcaaaaatactgacgaccacatagatattagcatacagtgcgattagcact 588

                              
Query: 210 tgacctctttcagcccatg 228
           |||||||||||||||||||
Sbjct: 587 tgacctctttcagcccatg 569

>gb|AF508970.1| Triticum aestivum translationally controlled tumor protein mRNA,
           complete cds
          Length = 779

 Score =  341 bits (172), Expect = 6e-91
 Identities = 215/228 (94%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gagtaaacgctgaggcattgaccaaaacacaaccacacaaatttcacgattaccattaca 60
           ||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 743 gagtaaaagccgaggcattgaccaaaacataaccacaccaatttcacgattaccattaca 684

                                                                       
Query: 61  aagcaaatcccatgattatcacaaagttttcaagatactcaacatctgatagttactgac 120
           ||||||||||||  ||||||| ||||||||||||| |||||||||||||||||||| |||
Sbjct: 683 aagcaaatcccacaattatcagaaagttttcaagacactcaacatctgatagttaccgac 624

                                                                       
Query: 121 acaagcattggagagtcgactgacaaccatagagcagagcaaaaatactgacgaccacat 180
           |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 623 acaa-cattggagagtcgactgacaaccatagagcaaagcaaaaatactgacgaccgcat 565

                                                           
Query: 181 agatattagcatacagtgcgattagcacttgacctctttcagcccatg 228
           |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agattttagcatacagtgcgattagcacttgacctctttcagcccatg 517

>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05,
              complete sequence
          Length = 162223

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 204    agcacttgacctctttcagcccatg 228
              ||||||||||||| |||||||||||
Sbjct: 133055 agcacttgacctccttcagcccatg 133079



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 133    gagtcgactgacaaccatagagcagagcaaaaatac 168
              ||||| |||||||||||||||  ||| |||||||||
Sbjct: 132971 gagtcaactgacaaccatagactagaccaaaaatac 133006

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 204      agcacttgacctctttcagcccatg 228
                ||||||||||||| |||||||||||
Sbjct: 25643008 agcacttgacctccttcagcccatg 25643032



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 133      gagtcgactgacaaccatagagcagagcaaaaatac 168
                ||||| |||||||||||||||  ||| |||||||||
Sbjct: 25672385 gagtcaactgacaaccatagactagaccaaaaatac 25672350



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 205      gcacttgacctctttcagcccatg 228
                |||||||||||| |||||||||||
Sbjct: 25672299 gcacttgacctccttcagcccatg 25672276



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 133      gagtcgactgacaaccatagagcagagcaaaaatac 168
                ||||| |||||||||||||||  ||| |||||||||
Sbjct: 25642924 gagtcaactgacaaccatagactagaccaaaaatac 25642959

>dbj|AK111285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-H08, full
           insert sequence
          Length = 1057

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 204 agcacttgacctctttcagcccatg 228
           ||||||||||||| |||||||||||
Sbjct: 250 agcacttgacctccttcagcccatg 226



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 133 gagtcgactgacaaccatagagcagagcaaaaatac 168
           ||||| |||||||||||||||  ||| |||||||||
Sbjct: 334 gagtcaactgacaaccatagactagaccaaaaatac 299

>dbj|AK105453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C05, full
           insert sequence
          Length = 970

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 204 agcacttgacctctttcagcccatg 228
           ||||||||||||| |||||||||||
Sbjct: 617 agcacttgacctccttcagcccatg 593



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 133 gagtcgactgacaaccatagagcagagcaaaaatac 168
           ||||| |||||||||||||||  ||| |||||||||
Sbjct: 701 gagtcaactgacaaccatagactagaccaaaaatac 666

>dbj|D12626.1|RIC21KDP Oryza sativa (japonica cultivar-group) mRNA for 21kd polypeptide,
           complete cds
          Length = 786

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 204 agcacttgacctctttcagcccatg 228
           ||||||||||||| |||||||||||
Sbjct: 582 agcacttgacctccttcagcccatg 558



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 133 gagtcgactgacaaccatagagcagagcaaaaatac 168
           ||||| |||||||||||||||  ||| |||||||||
Sbjct: 666 gagtcaactgacaaccatagactagaccaaaaatac 631

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 204      agcacttgacctctttcagcccatg 228
                ||||||||||||| |||||||||||
Sbjct: 25961678 agcacttgacctccttcagcccatg 25961702



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 133      gagtcgactgacaaccatagagcagagcaaaaatac 168
                ||||| |||||||||||||||  ||| |||||||||
Sbjct: 25991055 gagtcaactgacaaccatagactagaccaaaaatac 25991020



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 205      gcacttgacctctttcagcccatg 228
                |||||||||||| |||||||||||
Sbjct: 25990969 gcacttgacctccttcagcccatg 25990946



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 133      gagtcgactgacaaccatagagcagagcaaaaatac 168
                ||||| |||||||||||||||  ||| |||||||||
Sbjct: 25961594 gagtcaactgacaaccatagactagaccaaaaatac 25961629

>gb|AC006334.3| Homo sapiens BAC clone RP11-421B22 from 7, complete sequence
          Length = 141899

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   agagcagagcaaaaatactg 170
             ||||||||||||||||||||
Sbjct: 94198 agagcagagcaaaaatactg 94217

>gb|AC005101.2| Homo sapiens BAC clone CTA-352J5 from 7, complete sequence
          Length = 37991

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    catgattatcacaaagtttt 90
             ||||||||||||||||||||
Sbjct: 26125 catgattatcacaaagtttt 26144

>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence
          Length = 184032

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     ttatcacaaagttttcaaga 95
              ||||||||||||||||||||
Sbjct: 171904 ttatcacaaagttttcaaga 171923

>gb|AC146048.3| Pan troglodytes BAC clone RP43-44J1 from 7, complete sequence
          Length = 135620

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    catgattatcacaaagtttt 90
             ||||||||||||||||||||
Sbjct: 17133 catgattatcacaaagtttt 17152

>gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, complete sequence
          Length = 155704

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   agagcagagcaaaaatactg 170
             ||||||||||||||||||||
Sbjct: 31904 agagcagagcaaaaatactg 31923

>gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, complete sequence
          Length = 173862

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    attaccattacaaagcaaat 68
             ||||||||||||||||||||
Sbjct: 99557 attaccattacaaagcaaat 99538

>gb|AC146592.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0010P23 PCR product, complete sequence
          Length = 19234

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 133  gagtcgactgacaaccatagagcagagcaaaaatac 168
            ||||| |||||||||||||||  ||| |||||||||
Sbjct: 2595 gagtcaactgacaaccatagactagaccaaaaatac 2560



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 205  gcacttgacctctttcagcccatg 228
            |||||||||||| |||||||||||
Sbjct: 2509 gcacttgacctccttcagcccatg 2486

>emb|AL442126.6| Human DNA sequence from clone RP11-409J23 on chromosome 13,
           complete sequence
          Length = 133789

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 68  tcccatgattatcacaaagttttc 91
           |||| |||||||||||||||||||
Sbjct: 604 tcccctgattatcacaaagttttc 581

>emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chromosome 13 Contains a
              peroxisomal biogenesis factor 12 (PEX12) pseudogene,
              complete sequence
          Length = 136943

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 68     tcccatgattatcacaaagttttc 91
              |||| |||||||||||||||||||
Sbjct: 135547 tcccctgattatcacaaagttttc 135524

>ref|XM_697229.1| PREDICTED: Danio rerio hypothetical protein LOC554704 (LOC554704),
           mRNA
          Length = 2240

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 gagcagagcaaaaatactga 171
           ||||||||||||||||||||
Sbjct: 779 gagcagagcaaaaatactga 798

>gb|BC058066.1| Danio rerio zgc:63779, mRNA (cDNA clone MGC:63779 IMAGE:2643345),
           complete cds
          Length = 2257

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 gagcagagcaaaaatactga 171
           ||||||||||||||||||||
Sbjct: 779 gagcagagcaaaaatactga 798

>ref|NM_200674.1| Danio rerio zgc:63779 (zgc:63779), mRNA
          Length = 2257

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 gagcagagcaaaaatactga 171
           ||||||||||||||||||||
Sbjct: 779 gagcagagcaaaaatactga 798


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,929,398
Number of Sequences: 3902068
Number of extensions: 1929398
Number of successful extensions: 34402
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34348
Number of HSP's gapped (non-prelim): 53
length of query: 228
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 206
effective length of database: 17,147,199,772
effective search space: 3532323153032
effective search space used: 3532323153032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)