ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3b13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EEA1_MOUSE (Q8BL66) Early endosome antigen 1 31 0.76

>EEA1_MOUSE (Q8BL66) Early endosome antigen 1|
          Length = 1411

 Score = 31.2 bits (69), Expect = 0.76
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 96   ISTKALKAESRRQQTYCFIRETGEDPSSIQIKHNCAL 206
            + TKAL+ + +   T   ++E G +  S+QIKH  AL
Sbjct: 1309 LQTKALELQRKLDNTTAAVQELGRENQSLQIKHTQAL 1345


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,688,214
Number of Sequences: 219361
Number of extensions: 443157
Number of successful extensions: 1012
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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