ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
2dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
3dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
4emb|AL451046.8| Human DNA sequence from clone RP11-174C7 on chro... 48 0.038
5gb|AF079138.1|AF079138 Streptomyces venezuelae methymycin/pikrom... 44 0.59
6emb|AL512639.8| Human DNA sequence from clone RP11-346G21 on chr... 42 2.3
7emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segmen... 42 2.3
8gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold 42 2.3
9ref|XM_626967.1| Cryptosporidium parvum Iowa II insulinase like ... 42 2.3
10dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.3
11gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosom... 40 9.2
12gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 9.2
13gb|BC044543.1| Danio rerio histone deacetylase 3, mRNA (cDNA clo... 40 9.2
14gb|AC125262.9| Mus musculus chromosome 8, clone RP24-314K18, com... 40 9.2
15gb|AC123728.8| Mus musculus chromosome 3, clone RP23-453L19, com... 40 9.2
16gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 9.2
17gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 9.2
18ref|NM_200990.1| Danio rerio histone deacetylase 3 (hdac3), mRNA 40 9.2
19ref|XR_004015.1| PREDICTED: Mus musculus similar to putative phe... 40 9.2
20ref|XM_488033.3| PREDICTED: Mus musculus similar to putative phe... 40 9.2
21ref|XM_913379.1| PREDICTED: Mus musculus similar to putative phe... 40 9.2
22emb|AL954209.1| Pan troglodytes chromosome 22 clone PTB-126B09 m... 40 9.2
23ref|XM_720479.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.2
24gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, com... 40 9.2
25emb|AL139318.9| Human DNA sequence from clone RP11-124B17 on chr... 40 9.2
26emb|AL031965.8|HS355N11 Human DNA sequence from clone RP3-355N11... 40 9.2
27gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 9.2
28emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 9.2
29emb|AL031765.1|DMC22E5 Drosophila melanogaster cosmid clone 22E5 40 9.2
30emb|CR354536.8| Zebrafish DNA sequence from clone DKEY-101K8 in ... 40 9.2
31emb|CR385090.8| Zebrafish DNA sequence from clone CH211-245M19 i... 40 9.2
32emb|BX897670.7| Zebrafish DNA sequence from clone DKEY-117L15 in... 40 9.2
33emb|AL954208.1| Pan troglodytes chromosome 22 clone RP43-007L22 ... 40 9.2
34gb|AY121660.1| Drosophila melanogaster RE06985 full insert cDNA 40 9.2
35gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell P... 40 9.2
36ref|NM_130614.2| Drosophila melanogaster CG4322-RA (CG4322), mRNA 40 9.2
37gb|AC160567.2| Pan troglodytes BAC clone CH251-304P1 from chromo... 40 9.2
38gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell... 40 9.2
39gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polye... 40 9.2
40ref|XM_697331.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 9.2
41gb|AC157481.2| Pan troglodytes BAC clone CH251-445P21 from chrom... 40 9.2
42gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 9.2
43gb|AF209078.1|AF209078 Lepilemur dorsalis growth hormone recepto... 40 9.2
44gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 o... 40 9.2
45gb|AC115018.7| Mus musculus chromosome 3, clone RP24-221D2, comp... 40 9.2
46emb|BX000526.8| Zebrafish DNA sequence from clone BUSM1-87D10 in... 40 9.2
47gb|AC146978.7| Mus musculus chromosome 7, clone RP24-217F6, comp... 40 9.2
48gb|AC169518.1| Mus musculus chromosome 8, clone RP23-454H8, comp... 40 9.2 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 73/85 (85%), Gaps = 2/85 (2%)
 Strand = Plus / Minus

                                                                            
Query: 288      gccttgctttgcaatgagtaaaattagccttgaaacctccggaaggacaaacccatgttc 347
                |||||||||||||| | ||| || ||||||||||||||| ||||||||| |||||  |||
Sbjct: 12549546 gccttgctttgcaaag-gtacaa-tagccttgaaacctcaggaaggacatacccacattc 12549489

                                         
Query: 348      ggtgctgcttcaaaattccgctgct 372
                 | ||||||||||||| || |||||
Sbjct: 12549488 agcgctgcttcaaaatcccactgct 12549464



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 11       aaaaaagtttatatacatctgaattcacaaggagcaatcctgttccaat 59
                ||||||||||||||||| |  |||| ||||||| | || ||||||||||
Sbjct: 12549843 aaaaaagtttatatacagcaaaatttacaaggatcgattctgttccaat 12549795



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 422      atgtcttccttcatcgatata 442
                |||||||||||||||||||||
Sbjct: 12549406 atgtcttccttcatcgatata 12549386
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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0041C07
          Length = 179047

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 73/85 (85%), Gaps = 2/85 (2%)
 Strand = Plus / Minus

                                                                         
Query: 288   gccttgctttgcaatgagtaaaattagccttgaaacctccggaaggacaaacccatgttc 347
             |||||||||||||| | ||| || ||||||||||||||| ||||||||| |||||  |||
Sbjct: 15484 gccttgctttgcaaag-gtacaa-tagccttgaaacctcaggaaggacatacccacattc 15427

                                      
Query: 348   ggtgctgcttcaaaattccgctgct 372
              | ||||||||||||| || |||||
Sbjct: 15426 agcgctgcttcaaaatcccactgct 15402



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 11    aaaaaagtttatatacatctgaattcacaaggagcaatcctgttccaat 59
             ||||||||||||||||| |  |||| ||||||| | || ||||||||||
Sbjct: 15781 aaaaaagtttatatacagcaaaatttacaaggatcgattctgttccaat 15733



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   atgtcttccttcatcgatata 442
             |||||||||||||||||||||
Sbjct: 15344 atgtcttccttcatcgatata 15324
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>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0711A01
          Length = 162400

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 73/85 (85%), Gaps = 2/85 (2%)
 Strand = Plus / Minus

                                                                         
Query: 288   gccttgctttgcaatgagtaaaattagccttgaaacctccggaaggacaaacccatgttc 347
             |||||||||||||| | ||| || ||||||||||||||| ||||||||| |||||  |||
Sbjct: 64873 gccttgctttgcaaag-gtacaa-tagccttgaaacctcaggaaggacatacccacattc 64816

                                      
Query: 348   ggtgctgcttcaaaattccgctgct 372
              | ||||||||||||| || |||||
Sbjct: 64815 agcgctgcttcaaaatcccactgct 64791



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 11    aaaaaagtttatatacatctgaattcacaaggagcaatcctgttccaat 59
             ||||||||||||||||| |  |||| ||||||| | || ||||||||||
Sbjct: 65170 aaaaaagtttatatacagcaaaatttacaaggatcgattctgttccaat 65122



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   atgtcttccttcatcgatata 442
             |||||||||||||||||||||
Sbjct: 64733 atgtcttccttcatcgatata 64713
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>emb|AL451046.8| Human DNA sequence from clone RP11-174C7 on chromosome 6 Contains a
            ubiquitin-like 1 (sentrin) (UBL1) pseudogene, a novel
            pseudogene, a pyridoxal (pyridoxine, vitamin B6) kinase
            (PDXK) pseudogene and a novel gene, complete sequence
          Length = 105692

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 544  ccactcctctacaaaattctttcc 567
            ||||||||||||||||||||||||
Sbjct: 7374 ccactcctctacaaaattctttcc 7397
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>gb|AF079138.1|AF079138 Streptomyces venezuelae methymycin/pikromycin polyketide synthase gene
             cluster, complete sequence
          Length = 37948

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 630   gctgctcggcgcggccgtggcg 651
             ||||||||||||||||||||||
Sbjct: 24144 gctgctcggcgcggccgtggcg 24165
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>emb|AL512639.8| Human DNA sequence from clone RP11-346G21 on chromosome 9, complete
             sequence
          Length = 164774

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 196   caaattatatctacaaatgtt 216
             |||||||||||||||||||||
Sbjct: 83887 caaattatatctacaaatgtt 83907
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>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 572    gagaggccgcgatcggcgaga 592
              |||||||||||||||||||||
Sbjct: 159000 gagaggccgcgatcggcgaga 159020
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>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold
          Length = 489372

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    acacacacgcacactgaagag 88
             |||||||||||||||||||||
Sbjct: 19570 acacacacgcacactgaagag 19550
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>ref|XM_626967.1| Cryptosporidium parvum Iowa II insulinase like peptidase (cgd3_4240),
            partial mRNA
          Length = 3342

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 2    tataaacacaaaaaagtttat 22
            |||||||||||||||||||||
Sbjct: 2301 tataaacacaaaaaagtttat 2321
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 625     cgcgggctgctcggcgcggcc 645
               |||||||||||||||||||||
Sbjct: 4824169 cgcgggctgctcggcgcggcc 4824189
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>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete
             sequence
          Length = 217187

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 558   aattctttccatcagagagg 577
             ||||||||||||||||||||
Sbjct: 68155 aattctttccatcagagagg 68136
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     catctgcagctatatataca 113
              ||||||||||||||||||||
Sbjct: 248648 catctgcagctatatataca 248667
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>gb|BC044543.1| Danio rerio histone deacetylase 3, mRNA (cDNA clone MGC:55927
            IMAGE:3819179), complete cds
          Length = 2069

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  gcttcaaaattccgctgctt 373
            ||||||||||||||||||||
Sbjct: 988  gcttcaaaattccgctgctt 1007
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>gb|AC125262.9| Mus musculus chromosome 8, clone RP24-314K18, complete sequence
          Length = 185119

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   actgaagagctgcacatctg 99
            ||||||||||||||||||||
Sbjct: 1769 actgaagagctgcacatctg 1750
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>gb|AC123728.8| Mus musculus chromosome 3, clone RP23-453L19, complete sequence
          Length = 161887

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   gatgcaataccaaattatat 205
             ||||||||||||||||||||
Sbjct: 86710 gatgcaataccaaattatat 86729
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 629   ggctgctcggcgcggccgtggcgg 652
             ||||||||||||||||||| ||||
Sbjct: 39809 ggctgctcggcgcggccgtcgcgg 39832
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 629    ggctgctcggcgcggccgtggcgg 652
              ||||||||||||||||||| ||||
Sbjct: 843654 ggctgctcggcgcggccgtcgcgg 843677
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>ref|NM_200990.1| Danio rerio histone deacetylase 3 (hdac3), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  gcttcaaaattccgctgctt 373
            ||||||||||||||||||||
Sbjct: 988  gcttcaaaattccgctgctt 1007
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>ref|XR_004015.1| PREDICTED: Mus musculus similar to putative pheromone receptor
           (Go-VN5) (LOC672805), mRNA
          Length = 2561

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 554 acaaaattctttccatcagagagg 577
           |||||||||||| |||||||||||
Sbjct: 173 acaaaattctttacatcagagagg 150
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>ref|XM_488033.3| PREDICTED: Mus musculus similar to putative pheromone receptor
           (Go-VN5) (LOC435975), mRNA
          Length = 2559

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 554 acaaaattctttccatcagagagg 577
           |||||||||||| |||||||||||
Sbjct: 173 acaaaattctttacatcagagagg 150
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>ref|XM_913379.1| PREDICTED: Mus musculus similar to putative pheromone receptor
           (Go-VN5) (LOC435975), mRNA
          Length = 2559

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 554 acaaaattctttccatcagagagg 577
           |||||||||||| |||||||||||
Sbjct: 173 acaaaattctttacatcagagagg 150
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>emb|AL954209.1| Pan troglodytes chromosome 22 clone PTB-126B09 map q21.1, complete
              sequence
          Length = 208417

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    ctcctctacaaaattctttc 566
              ||||||||||||||||||||
Sbjct: 110741 ctcctctacaaaattctttc 110760
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>ref|XM_720479.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05153)
            partial mRNA
          Length = 3171

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   aaaaagtttatatacatctg 31
            ||||||||||||||||||||
Sbjct: 2991 aaaaagtttatatacatctg 2972
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>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence
          Length = 195549

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 554   acaaaattctttccatcagagagg 577
             |||||||||||| |||||||||||
Sbjct: 94104 acaaaattctttacatcagagagg 94127
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>emb|AL139318.9| Human DNA sequence from clone RP11-124B17 on chromosome 13 Contains the
              DCT gene for dopachrome tautomerase (dopachrome
              delta-isomerase, tyrosine-related protein 2) (TYRP2), the
              3' end of the gene for dTDP-D-glucose 4,6-dehydratase
              (TDPGD) and a CpG island, complete sequence
          Length = 160004

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    aaattatatctacaaatgtt 216
              ||||||||||||||||||||
Sbjct: 133745 aaattatatctacaaatgtt 133726
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>emb|AL031965.8|HS355N11 Human DNA sequence from clone RP3-355N11 on chromosome 1q24.1-24.3
             Contains the 5' end of a novel gene (FLJ23550), complete
             sequence
          Length = 78336

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 518   agatatcagttctggagggaagaa 541
             |||| |||||||||||||||||||
Sbjct: 32233 agatctcagttctggagggaagaa 32210
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aaacacaaaaaagtttatat 24
              ||||||||||||||||||||
Sbjct: 786963 aaacacaaaaaagtttatat 786982
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 629    ggctgctcggcgcggccgtggcgg 652
              ||||||||||||||||||| ||||
Sbjct: 686070 ggctgctcggcgcggccgtcgcgg 686093
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>emb|AL031765.1|DMC22E5 Drosophila melanogaster cosmid clone 22E5
          Length = 45672

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctgcacatctgcagctatat 108
             ||||||||||||||||||||
Sbjct: 13110 ctgcacatctgcagctatat 13091
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>emb|CR354536.8| Zebrafish DNA sequence from clone DKEY-101K8 in linkage group 17,
             complete sequence
          Length = 157228

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gcttcaaaattccgctgctt 373
             ||||||||||||||||||||
Sbjct: 84121 gcttcaaaattccgctgctt 84102
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>emb|CR385090.8| Zebrafish DNA sequence from clone CH211-245M19 in linkage group 5,
             complete sequence
          Length = 140222

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   ttgctttgcaatgagtaaaattag 314
             |||||||||||||| |||||||||
Sbjct: 59535 ttgctttgcaatgattaaaattag 59512
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>emb|BX897670.7| Zebrafish DNA sequence from clone DKEY-117L15 in linkage group 8,
             complete sequence
          Length = 107559

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   ttgctttgcaatgagtaaaattag 314
             |||||||||||||| |||||||||
Sbjct: 22573 ttgctttgcaatgattaaaattag 22550
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>emb|AL954208.1| Pan troglodytes chromosome 22 clone RP43-007L22 map q21.1, complete
              sequence
          Length = 214722

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    ctcctctacaaaattctttc 566
              ||||||||||||||||||||
Sbjct: 124999 ctcctctacaaaattctttc 125018
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>gb|AY121660.1| Drosophila melanogaster RE06985 full insert cDNA
          Length = 2957

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   ctgcacatctgcagctatat 108
            ||||||||||||||||||||
Sbjct: 1114 ctgcacatctgcagctatat 1133
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>gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 169618

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ctgcacatctgcagctatat 108
              ||||||||||||||||||||
Sbjct: 153718 ctgcacatctgcagctatat 153699
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>ref|NM_130614.2| Drosophila melanogaster CG4322-RA (CG4322), mRNA
          Length = 2941

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   ctgcacatctgcagctatat 108
            ||||||||||||||||||||
Sbjct: 1114 ctgcacatctgcagctatat 1133
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>gb|AC160567.2| Pan troglodytes BAC clone CH251-304P1 from chromosome unknown, complete
              sequence
          Length = 174998

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 547    ctcctctacaaaattctttc 566
              ||||||||||||||||||||
Sbjct: 159347 ctcctctacaaaattctttc 159328
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>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 177724

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctgcacatctgcagctatat 108
             ||||||||||||||||||||
Sbjct: 20143 ctgcacatctgcagctatat 20124
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>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
             biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 630   gctgctcggcgcggccgtgg 649
             ||||||||||||||||||||
Sbjct: 76101 gctgctcggcgcggccgtgg 76082



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 630   gctgctcggcgcggccgtgg 649
             ||||||||||||||||||||
Sbjct: 69438 gctgctcggcgcggccgtgg 69419



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 630   gctgctcggcgcggccgtgg 649
             ||||||||||||||||||||
Sbjct: 23822 gctgctcggcgcggccgtgg 23841
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>ref|XM_697331.1| PREDICTED: Danio rerio hypothetical protein LOC554392 (LOC554392),
           mRNA
          Length = 1873

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 gcttcaaaattccgctgctt 373
           ||||||||||||||||||||
Sbjct: 800 gcttcaaaattccgctgctt 819
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>gb|AC157481.2| Pan troglodytes BAC clone CH251-445P21 from chromosome unknown, complete
              sequence
          Length = 184485

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    ctcctctacaaaattctttc 566
              ||||||||||||||||||||
Sbjct: 124725 ctcctctacaaaattctttc 124744
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 629     ggctgctcggcgcggccgtg 648
               ||||||||||||||||||||
Sbjct: 4250615 ggctgctcggcgcggccgtg 4250634
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>gb|AF209078.1|AF209078 Lepilemur dorsalis growth hormone receptor (GHR) gene, partial cds
          Length = 2064

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 426 cttccttcatcgatatattc 445
           ||||||||||||||||||||
Sbjct: 427 cttccttcatcgatatattc 446
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>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete
              sequence
          Length = 300933

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ctgcacatctgcagctatat 108
              ||||||||||||||||||||
Sbjct: 280695 ctgcacatctgcagctatat 280676
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>gb|AC115018.7| Mus musculus chromosome 3, clone RP24-221D2, complete sequence
          Length = 164720

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   aataccaaattatatctaca 210
             ||||||||||||||||||||
Sbjct: 87448 aataccaaattatatctaca 87467
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>emb|BX000526.8| Zebrafish DNA sequence from clone BUSM1-87D10 in linkage group 14,
             complete sequence
          Length = 94928

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   gcttcaaaattccgctgctt 373
             ||||||||||||||||||||
Sbjct: 78311 gcttcaaaattccgctgctt 78330
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>gb|AC146978.7| Mus musculus chromosome 7, clone RP24-217F6, complete sequence
          Length = 152682

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 554    acaaaattctttccatcagagagg 577
              |||||||||||| |||||||||||
Sbjct: 136878 acaaaattctttacatcagagagg 136901
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>gb|AC169518.1| Mus musculus chromosome 8, clone RP23-454H8, complete sequence
          Length = 194822

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    actgaagagctgcacatctg 99
             ||||||||||||||||||||
Sbjct: 53607 actgaagagctgcacatctg 53588


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,481,181
Number of Sequences: 3902068
Number of extensions: 6481181
Number of successful extensions: 173005
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 172237
Number of HSP's gapped (non-prelim): 768
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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