| Clone Name | rbags3b04 |
|---|---|
| Clone Library Name | barley_pub |
>RL72_ARATH (P60039) 60S ribosomal protein L7-2| Length = 242 Score = 174 bits (441), Expect = 1e-43 Identities = 79/111 (71%), Positives = 92/111 (82%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYV YGYPNLKSV+ELIYKRGYGKLN QRI LT+N ++++ LGK IIC+ED++HEI+TV Sbjct: 132 PYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTV 191 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 GPHF EANNFLWPF KRNHYVEGGDAGNRE++IN+LVRRMN Sbjct: 192 GPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242
>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3| Length = 244 Score = 173 bits (438), Expect = 2e-43 Identities = 78/111 (70%), Positives = 92/111 (82%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYV YGYPNLKSV+ELIYKRG+GKLN QR LT+N ++++GLGK IIC+ED++HEI+TV Sbjct: 134 PYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTV 193 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 GPHF EANNFLWPF KRNHYVEGGDAGNRE++IN+LVRRMN Sbjct: 194 GPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244
>RL71_ARATH (P60040) 60S ribosomal protein L7-1| Length = 242 Score = 172 bits (437), Expect = 3e-43 Identities = 79/111 (71%), Positives = 91/111 (81%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYV YG+PNLKSV+ELIYKRGYGKLN QRI LT+N ++E+ LGK IIC ED++HEILTV Sbjct: 132 PYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTV 191 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 GPHF EANNFLWPF KRNHYVEGGDAGNRE++IN+L+RRMN Sbjct: 192 GPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242
>RL7_MOUSE (P14148) 60S ribosomal protein L7| Length = 270 Score = 156 bits (394), Expect = 3e-38 Identities = 73/111 (65%), Positives = 85/111 (76%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PY+A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N +I LGK IIC+ED++HEI TV Sbjct: 160 PYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTV 219 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 G F EANNFLWPF K H+VEGGDAGNRED IN+L+RRMN Sbjct: 220 GKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270
>RL7_HUMAN (P18124) 60S ribosomal protein L7| Length = 248 Score = 155 bits (393), Expect = 4e-38 Identities = 73/111 (65%), Positives = 85/111 (76%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PY+A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N +I LGK IIC+ED++HEI TV Sbjct: 138 PYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTV 197 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 G F EANNFLWPF K H+VEGGDAGNRED IN+L+RRMN Sbjct: 198 GKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7| Length = 248 Score = 155 bits (393), Expect = 4e-38 Identities = 73/111 (65%), Positives = 85/111 (76%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PY+A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N +I LGK IIC+ED++HEI TV Sbjct: 138 PYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTV 197 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 G F EANNFLWPF K H+VEGGDAGNRED IN+L+RRMN Sbjct: 198 GKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
>RL7_RAT (P05426) 60S ribosomal protein L7| Length = 260 Score = 155 bits (393), Expect = 4e-38 Identities = 72/111 (64%), Positives = 85/111 (76%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PY+A+GYPNLKSV ELIYKRGYGK+NK+RI LT+N ++ LGK IIC+ED++HEI TV Sbjct: 150 PYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTV 209 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 G F EANNFLWPF K H+VEGGDAGNRED IN+L+RRMN Sbjct: 210 GKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260
>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7| Length = 248 Score = 155 bits (392), Expect = 5e-38 Identities = 70/112 (62%), Positives = 90/112 (80%), Gaps = 1/112 (0%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 P+VAYGYPNLKSV+ELIYKRGYGK+NKQR+ LT+N +IEE LGK IIC+ED++HEI TV Sbjct: 137 PWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTV 196 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNREDYINQLVRRMN 128 GP+F +A+NFLWPF ++ H++EGGD GNRE++IN L+R+MN Sbjct: 197 GPNFKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248
>RL7_YARLI (Q6C603) 60S ribosomal protein L7| Length = 250 Score = 147 bits (371), Expect = 1e-35 Identities = 67/113 (59%), Positives = 85/113 (75%), Gaps = 2/113 (1%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PY+A+GYPNL SVR+L+YKRGYGK+NKQRIPL++N +IEE LGK IIC+ED++HEI TV Sbjct: 138 PYIAFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTV 197 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 128 GP F +A+NFLWPF +R HY+EGG GNRE+ IN L++ N Sbjct: 198 GPAFKQASNFLWPFKLSNPSGGWGVRRKFKHYIEGGSTGNREENINALIKAQN 250
>RL7_CAEEL (O01802) 60S ribosomal protein L7| Length = 244 Score = 145 bits (367), Expect = 4e-35 Identities = 64/110 (58%), Positives = 82/110 (74%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYVA+GYPN K++ +L+YKRGY K++ R+P+T+N ++E+ LGK IIC+ED+ HEI TV Sbjct: 134 PYVAWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATV 193 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 131 GPHF EA NFLWPF K NH+VEGGD GNRED IN L+R+M Sbjct: 194 GPHFKEATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQINNLLRKM 243
>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)| Length = 243 Score = 144 bits (362), Expect = 1e-34 Identities = 62/113 (54%), Positives = 86/113 (76%), Gaps = 2/113 (1%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYVAYGYP+ ++R+L+YKRG+GK+NKQR+PL++N +IE LGK I+ I+D++HEI+TV Sbjct: 131 PYVAYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITV 190 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 128 GPHF +ANNFLWPF R H+++GG GNRE++IN+LV+ MN Sbjct: 191 GPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKAMN 243
>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)| Length = 243 Score = 144 bits (362), Expect = 1e-34 Identities = 62/113 (54%), Positives = 86/113 (76%), Gaps = 2/113 (1%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYVAYGYP+ ++R+L+YKRG+GK+NKQR+PL++N +IE LGK I+ I+D++HEI+TV Sbjct: 131 PYVAYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITV 190 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 128 GPHF +ANNFLWPF R H+++GG GNRE++IN+LV+ MN Sbjct: 191 GPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKSMN 243
>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7| Length = 241 Score = 142 bits (359), Expect = 3e-34 Identities = 63/112 (56%), Positives = 86/112 (76%), Gaps = 1/112 (0%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PY+AYGYPNL ++R L+YKRG+GK+NKQRI L++N +IE LGK I+ IED++HEI TV Sbjct: 130 PYIAYGYPNLSTIRHLVYKRGHGKINKQRIALSDNAIIEANLGKYGILSIEDLIHEIYTV 189 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNREDYINQLVRRMN 128 GP+F +ANNFLWPF ++ H+++GGD GNRE++IN LV++MN Sbjct: 190 GPNFKQANNFLWPFKLSNPNGGFRTRKFFHFIQGGDTGNREEFINALVKQMN 241
>RL7_ASHGO (Q755A7) 60S ribosomal protein L7| Length = 243 Score = 142 bits (357), Expect = 5e-34 Identities = 62/113 (54%), Positives = 84/113 (74%), Gaps = 2/113 (1%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYVAYGYP+ ++R+L+YKRGYGK+NKQRI L+ N ++E LGK II ++D++HEI+TV Sbjct: 131 PYVAYGYPSYSTIRQLVYKRGYGKINKQRIALSENSIVEANLGKYGIISVDDLIHEIITV 190 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 128 GPHF +ANNFLWPF R H+++GG GNRE++IN+LV+ MN Sbjct: 191 GPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREEFINKLVKSMN 243
>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7| Length = 244 Score = 139 bits (349), Expect = 5e-33 Identities = 62/113 (54%), Positives = 84/113 (74%), Gaps = 2/113 (1%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYVAYGYP+ +VR+L+YKRG+GK+NKQRI L++N ++E LGK I+ I+D++HEI+TV Sbjct: 132 PYVAYGYPSYSTVRQLVYKRGHGKINKQRIALSDNAIVEANLGKFGILSIDDLIHEIVTV 191 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 128 GPHF +ANNFLWPF R H+++GG GNRE +IN+LV+ MN Sbjct: 192 GPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREQFINKLVKAMN 244
>RL7_DICDI (P11874) 60S ribosomal protein L7| Length = 245 Score = 138 bits (348), Expect = 6e-33 Identities = 63/111 (56%), Positives = 82/111 (73%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYVAYG+PNLKS++ELIYKRG+ K++ QRIPLT+N ++E+ LGK IIC+ED++HEI T Sbjct: 135 PYVAYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLGKFGIICVEDIIHEITTC 194 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 G HF + NN LWPF K+ +++GGDAGNRE IN L+ RMN Sbjct: 195 GKHFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNLIHRMN 245
>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C| Length = 251 Score = 138 bits (347), Expect = 8e-33 Identities = 63/111 (56%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYV YG PNLK+VREL+YKRG+GK+NKQRI L++N +IE LGK I+ IED++HEI TV Sbjct: 140 PYVTYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTV 199 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNREDYINQLVRRM 131 GP+F +A NF+WPF ++ H++EGGDAG R+++IN LVR+M Sbjct: 200 GPNFKQAANFIWPFQLSSPLGGWRDRKFKHFIEGGDAGKRDEHINSLVRKM 250
>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B| Length = 250 Score = 137 bits (345), Expect = 1e-32 Identities = 63/111 (56%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYV YG PN K+VRELIYKRG+GK+NKQRIPL++N +IE LGK I+ +ED++HEI TV Sbjct: 139 PYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTV 198 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNREDYINQLVRRM 131 GP+F +A NFLWPF ++ H++EGGDAG R+++IN LV++M Sbjct: 199 GPNFKQAANFLWPFKLSSPLGGWRERKFKHFIEGGDAGKRDEHINGLVQKM 249
>RL7_DROME (P32100) 60S ribosomal protein L7| Length = 252 Score = 137 bits (345), Expect = 1e-32 Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXII-CIEDVVHEILT 284 PY+ +GYPNLKSVRELIYKRG+ K N+QR+P+T+N VIE L + I C+ED+VHEI T Sbjct: 141 PYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFT 200 Query: 283 VGPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 131 VGP+F A+NFLWPF K NHYV GGD GNRED IN+L+R+M Sbjct: 201 VGPNFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKM 251
>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A| Length = 249 Score = 117 bits (292), Expect = 2e-26 Identities = 58/110 (52%), Positives = 73/110 (66%), Gaps = 1/110 (0%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYV YG PNL SVRELIYKRG+GK+N QRI L++N +IEE LGK +I IED++HEI V Sbjct: 138 PYVMYGIPNLHSVRELIYKRGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNV 197 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNREDYINQLVRR 134 G HF E FLWPF K+ H+ EG AG + IN+L+++ Sbjct: 198 GSHFKEVTKFLWPFTLTPVKHSLMEKKVKHFNEGRKAGYCGEEINELIKK 247
>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1| Length = 246 Score = 108 bits (271), Expect = 5e-24 Identities = 55/111 (49%), Positives = 70/111 (63%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYV +G+PNLKSVRELI KRG K+ + IPLT+N VIEE LGK +IC+ED++HEI Sbjct: 136 PYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFP 195 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 G HF E + FL PF + E G G R + INQL+R++N Sbjct: 196 GKHFQEISWFLCPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1| Length = 246 Score = 108 bits (270), Expect = 7e-24 Identities = 55/111 (49%), Positives = 70/111 (63%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTV 281 PYV +G+PNLKSVRELI KRG K+ + IPLT+N VIEE LGK +IC+ED++HEI Sbjct: 136 PYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFP 195 Query: 280 GPHFXEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 128 G HF E + FL PF + E G G R + INQL+R++N Sbjct: 196 GKHFQEISWFLRPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein| L7-like) Length = 322 Score = 71.2 bits (173), Expect = 1e-12 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGY------GKLNKQRIPLTNNKVIEEGLGKXXIICIEDVV 299 PYV G P+L S+R LI KRG + I L +N ++EE LG IIC+ED++ Sbjct: 192 PYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDII 251 Query: 298 HEILTVGPHFXEANNFLWPF 239 HEI T+G F N FL PF Sbjct: 252 HEIATMGESFSVCNFFLQPF 271
>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7| Length = 317 Score = 70.5 bits (171), Expect = 2e-12 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 6/80 (7%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRG---YGKLNKQR---IPLTNNKVIEEGLGKXXIICIEDVV 299 PYV G P+LKS+R LI KR Y + +++ I L +N ++EE LG +ICI+D++ Sbjct: 187 PYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDII 246 Query: 298 HEILTVGPHFXEANNFLWPF 239 HEI T+G +F + N FL PF Sbjct: 247 HEIATLGENFTKCNFFLQPF 266
>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7| Length = 293 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 6/80 (7%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGY------GKLNKQRIPLTNNKVIEEGLGKXXIICIEDVV 299 PYV G P+L S+R L+ KR G+ + L +N V+EE LG +IC+ED++ Sbjct: 163 PYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDII 222 Query: 298 HEILTVGPHFXEANNFLWPF 239 HEI T+G F + N FL PF Sbjct: 223 HEIATMGEAFAKCNFFLLPF 242
>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7| Length = 318 Score = 66.2 bits (160), Expect = 4e-11 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 6/80 (7%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNK------QRIPLTNNKVIEEGLGKXXIICIEDVV 299 PY+ G P+L S+R LI KR + + I L +N ++EE LG +ICIED++ Sbjct: 188 PYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDII 247 Query: 298 HEILTVGPHFXEANNFLWPF 239 HEI T+G +F + FL PF Sbjct: 248 HEISTLGENFSKCTFFLLPF 267
>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7| Length = 239 Score = 61.6 bits (148), Expect = 9e-10 Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 1/110 (0%) Frame = -2 Query: 457 YVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTVG 278 +VA+G ++ +R+L+Y +G G+ R+ LTN + + GK I CIE++VH I Sbjct: 131 HVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGT 188 Query: 277 PHFXEANNFLWPFXXXXXXXXXXXKRN-HYVEGGDAGNREDYINQLVRRM 131 F + N+FL+PF +++ + +GG GN +D ++ L+ RM Sbjct: 189 EMFKKVNSFLYPFHLSPPRGGFKGQKSKSFNDGGSVGNHQDLLSNLLERM 238
>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7| Length = 275 Score = 57.8 bits (138), Expect = 1e-08 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 7/81 (8%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGY-----GKLNKQRIP-LTNNKVIEEGLGKXX-IICIEDV 302 PY+ G P+L S+R+L KR + + RI L NN V+E+ G ICIED+ Sbjct: 146 PYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDL 205 Query: 301 VHEILTVGPHFXEANNFLWPF 239 +HE+ T+G HF +N++ PF Sbjct: 206 IHELATLGEHFKTVSNWILPF 226
>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)| Length = 212 Score = 55.1 bits (131), Expect = 9e-08 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 6/80 (7%) Frame = -2 Query: 460 PYVAYGYPNLKSVRELIYKRGYGKLNK------QRIPLTNNKVIEEGLGKXXIICIEDVV 299 PY P+L++VR+L+ KR + +++ L +N ++EE LG IICIED++ Sbjct: 83 PYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDII 142 Query: 298 HEILTVGPHFXEANNFLWPF 239 HE + F +FL PF Sbjct: 143 HETSHLATTFKTVTHFLDPF 162
>RL30_PYRHO (O59440) 50S ribosomal protein L30P| Length = 155 Score = 31.2 bits (69), Expect = 1.3 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%) Frame = -2 Query: 457 YVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTVG 278 Y+ +G N +++ +LI KRG NK P+T+ + ++E LG + IE+ +++ Sbjct: 53 YITWGEINAETLAKLIRKRGKLIGNK---PVTD-EYVKEKLG----MTIEEFAQKVINGE 104 Query: 277 PHFXEANNFLWPFXXXXXXXXXXXKRNH-YVEGGDAGNREDYINQLVRRM 131 + N F + + EGG G R + IN+L+ RM Sbjct: 105 MSLKDLPNLKPVFRLHPPRGGFKGSKKRSFQEGGALGYRGEKINELIERM 154
>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)| Length = 155 Score = 30.8 bits (68), Expect = 1.8 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%) Frame = -2 Query: 457 YVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKXXIICIEDVVHEILTVG 278 Y+ +G N +++ +LI KRG NK P+T+ + ++E LG + IE+ +++ Sbjct: 53 YITWGEINAETLAKLIRKRGRLIGNK---PVTD-EYVKEKLG----MTIEEFAQKVVNGE 104 Query: 277 PHFXEANNFLWPFXXXXXXXXXXXKRNH-YVEGGDAGNREDYINQLVRRM 131 + N F + + EGG G R + IN+L+ RM Sbjct: 105 MSLKDLPNLKPVFRLHPPRGGFRGSKKRSFKEGGALGYRGEKINELIERM 154
>YFIE_ECOLI (P33634) Putative HTH-type transcriptional regulator yfiE| Length = 293 Score = 28.5 bits (62), Expect = 8.7 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 98 LEDVLFVKPALH*EVDGGCSFYISEPXCMF 9 + DV F +P H CSF I+EP C+F Sbjct: 172 IADVDFTEPGRH----NACSFIINEPQCVF 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,225,391 Number of Sequences: 219361 Number of extensions: 1105849 Number of successful extensions: 2207 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2189 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)