Clone Information

BLAST Search Result

Clone Name	rbags3b02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	APOD_MOUSE (P51910) Apolipoprotein D precursor (Apo-D) (ApoD)	49	2e-05
2	APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)	46	8e-05
3	PTGDS_MACFU (Q9TUI1) Prostaglandin-H2 D-isomerase precursor (EC ...	39	0.016
4	PTGDS_HORSE (O97921) Prostaglandin-H2 D-isomerase precursor (EC ...	38	0.021
5	APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)	38	0.021
6	PTGDS_PONPY (Q8WNM0) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.035
7	PTGDS_HUMAN (P41222) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.035
8	PTGDS_GORGO (Q8WNM1) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.046
9	PTGDS_FELCA (Q29487) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.061
10	PTGDS_URSAR (Q29562) Prostaglandin-H2 D-isomerase precursor (EC ...	36	0.079
11	PTGDS_CANFA (Q9XS65) Prostaglandin-H2 D-isomerase precursor (EC ...	36	0.079
12	APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)	35	0.13
13	APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)	34	0.30
14	APOD_CAVPO (P51909) Apolipoprotein D precursor (Apo-D) (ApoD)	34	0.30
15	BLG4_BLAGE (P54962) Allergen Bla g 4 precursor (Bla g IV) (Fragm...	34	0.39
16	PTGDS_SHEEP (Q9XSM0) Prostaglandin-H2 D-isomerase precursor (EC ...	33	0.51
17	EXFAB_COTJA (Q9I9P7) Extracellular fatty acid-binding protein pr...	33	0.67
18	CRA2_HOMGA (P80007) Crustacyanin-A2 subunit	33	0.87
19	PTGDS_PIG (Q29095) Prostaglandin-H2 D-isomerase precursor (EC 5....	32	1.1
20	NHR18_CAEEL (O16360) Nuclear hormone receptor family member nhr-18	32	1.1
21	RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2	32	1.1
22	PTGDS_BOVIN (O02853) Prostaglandin-H2 D-isomerase precursor (EC ...	32	1.5
23	LAZA_SCHAM (P49291) Lazarillo protein precursor	32	1.5
24	ISW1_YEAST (P38144) Chromatin remodelling complex ATPase chain I...	32	1.9
25	CRC1_HOMGA (P80029) Crustacyanin-C1 subunit	31	2.5
26	CRA1_HOMGA (P58989) Crustacyanin-A1 subunit	31	2.5
27	VL2_HPV55 (Q80939) Minor capsid protein L2	31	2.5
28	PURP_CHICK (P08938) Purpurin precursor	31	2.5
29	FOS_AVINK (P23050) p55-v-Fos transforming protein	31	3.3
30	FOS_CHICK (P11939) Proto-oncogene protein c-fos (Cellular oncoge...	31	3.3
31	COMD5_RAT (Q9ERR2) COMM domain-containing protein 5 (Hypertensio...	31	3.3
32	NGAL_MOUSE (P11672) Neutrophil gelatinase-associated lipocalin p...	31	3.3
33	EXFAB_CHICK (P21760) Extracellular fatty acid-binding protein pr...	30	4.3
34	FOS_PIG (O97930) Proto-oncogene protein c-fos (Cellular oncogene...	30	4.3
35	YAN4_SCHPO (Q10070) Hypothetical protein C3H1.04c in chromosome I	30	4.3
36	COMD5_MOUSE (Q8R395) COMM domain-containing protein 5	30	4.3
37	MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) ...	30	4.3
38	MUP3_MOUSE (P04939) Major urinary protein 3 precursor (MUP 3) (N...	30	7.4
39	YFCB_ECOLI (P39199) Hypothetical adenine-specific methylase yfcB...	29	9.7
40	DRL29_ARATH (Q9SZA7) Probable disease resistance protein At4g33300	29	9.7
41	BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor	29	9.7
42	BLC_ECO57 (P0A902) Outer membrane lipoprotein blc precursor	29	9.7
43	RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2	29	9.7

>APOD_MOUSE (P51910) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 34/117 (29%), Positives = 46/117 (39%), Gaps = 6/117 (5%)
 Frame = -1

Query: 582 SPDGYITGIRGKVQCLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDY 403
           SPDG +  ++G+                 K+  +S    L     P +P  PY +LATDY
Sbjct: 82  SPDGTMNQVKGEA----------------KQSNVSEPAKLEVQFFPLMPPAPYWILATDY 125

Query: 402 DNYAVVSGAK------DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQ 250
           +NYA+V             F+ I  R P   PE I   K      G D  K+  T Q
Sbjct: 126 ENYALVYSCTTFFWLFHVDFVWILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQ 182

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>APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
 Frame = -1

Query: 552 GKVQCLSQEDMASAETDLEKEEM----ISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 385
           GK++ L+QE  A    +  + E     ++    L      F+P  PY +LATDY+NYA+V
Sbjct: 72  GKIKVLNQELRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMPSAPYWILATDYENYALV 131

Query: 384 SGAK------DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQ 250
                        F  I +R PN  PE ++  K+       D  K+  T Q
Sbjct: 132 YSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQ 182

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>PTGDS_MACFU (Q9TUI1) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 190

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
 Frame = -1

Query: 420 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           V+ TDYD+YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDHYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFSAFCKAQGFTEDSIVF 179

Query: 258 TPQDCEVSSDQ 226
            PQ  +  ++Q
Sbjct: 180 LPQTDKCMTEQ 190

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>PTGDS_HORSE (O97921) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 194

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
 Frame = -1

Query: 420 VLATDYDNYAVVS---------GAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 268
           V+ TDY+ YA++          G +D     +YSR  +P PE  EK+ ++A   G+    
Sbjct: 120 VVETDYEEYALLYTHAESTKGLGGQDFRMATLYSRVQSPRPEVKEKFSTFAKAQGFTEDA 179

Query: 267 IKDTPQ 250
           I   PQ
Sbjct: 180 IVFLPQ 185

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>APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
 Frame = -1

Query: 552 GKVQCLSQEDMASAETDLEKEEM----ISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 385
           GK++ L+QE  A    +  + E     I+    L      F+P  PY VLATDY+NYA+V
Sbjct: 72  GKIKVLNQELRADGTVNQIEGEASPVNITEPAKLEVKFFWFMPSAPYWVLATDYENYALV 131

Query: 384 SGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQD 247
                        +  I +R  +   E ++  K+       D  K+  T Q+
Sbjct: 132 YSCVSIINLFRVDYAWILARNRHLPSETVDFLKNILTSNNIDVKKMTVTDQE 183

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>PTGDS_PONPY (Q8WNM0) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 190

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -1

Query: 420 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           V+ TDYD YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179

Query: 258 TPQDCEVSSDQ 226
            PQ  +  ++Q
Sbjct: 180 LPQTDKCMTEQ 190

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>PTGDS_HUMAN (P41222) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS) (Beta-trace protein) (Cerebrin-28)
          Length = 190

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -1

Query: 420 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           V+ TDYD YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179

Query: 258 TPQDCEVSSDQ 226
            PQ  +  ++Q
Sbjct: 180 LPQTDKCMTEQ 190

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>PTGDS_GORGO (Q8WNM1) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 190

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -1

Query: 420 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           V+ TDYD YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179

Query: 258 TPQDCEVSSDQ 226
            PQ  +  ++Q
Sbjct: 180 LPQTDKCLTEQ 190

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>PTGDS_FELCA (Q29487) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 36.6 bits (83), Expect = 0.061
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = -1

Query: 420 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           V+ATDY+ YA++      S  +D     +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VVATDYEEYALLYTAGTKSPGQDFHMATLYSRTQTPRAEVKEKFSTFAKTRGFTEDAIVF 179

Query: 258 TPQ 250
            P+
Sbjct: 180 LPK 182

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>PTGDS_URSAR (Q29562) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
 Frame = -1

Query: 420 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           V  TDYD YA++  +G K    D     +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VAMTDYDEYALLYTTGTKGLGQDFHMATLYSRTQTPRAEIKEKFTTFAKTQGFTEDAIVF 179

Query: 258 TPQ 250
            PQ
Sbjct: 180 LPQ 182

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>PTGDS_CANFA (Q9XS65) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
 Frame = -1

Query: 420 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           V+AT+Y+ YA++  +G+K    D     +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VVATNYEEYALLYTAGSKGLGQDFHMATLYSRTQTPKAEIKEKFSTFAKTQGFTEDAIVF 179

Query: 258 TPQ 250
            PQ
Sbjct: 180 LPQ 182

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>APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
 Frame = -1

Query: 495 KEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAK------DTSFIQIYSRTPN 334
           K+  +S    L       +P  PY +LATDY++YA+V             ++ I  R P 
Sbjct: 95  KQSNMSEPAKLEVQFFSLMPPAPYWILATDYESYALVYSCTTFFWFFHVDYVWILGRNPY 154

Query: 333 PGPEFIEKYKSYAAGFGYDPSKIKDTPQ 250
             PE I   K        D +KI    Q
Sbjct: 155 LPPETITYLKYILTSNDIDIAKITTKDQ 182

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>APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = -1

Query: 579 PDGYITGIRGKVQCLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYD 400
           PDG +  I G+          + +++L +   +  K F   PT P      Y VLATDY+
Sbjct: 84  PDGTVNQIEGQ----------ATQSNLTEPAKLGVKFFQLMPTAP------YWVLATDYE 127

Query: 399 NYAVV 385
           NYA+V
Sbjct: 128 NYALV 132

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>APOD_CAVPO (P51909) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = -1

Query: 552 GKVQCLSQEDMASAETDLEKEEM----ISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 385
           G+V+ L+QE       +  + E     I+    L       +P  PY VLATDYDNYA+V
Sbjct: 72  GRVKVLNQELRPDGTVNQIEGEATHSNITEPAKLGVKFFQLMPSAPYWVLATDYDNYALV 131

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>BLG4_BLAGE (P54962) Allergen Bla g 4 precursor (Bla g IV) (Fragment)|
          Length = 182

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 429 PYDVLATDYDNYAVVSG 379
           PY VLATDY+NYA+V G
Sbjct: 101 PYSVLATDYENYAIVEG 117

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>PTGDS_SHEEP (Q9XSM0) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = -1

Query: 420 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           V  TDY+ YA++          D+    +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VAETDYETYALLYTESVRGPGPDSLMATLYSRTQTPRAEVKEKFTTFARSLGFTEEGIVF 179

Query: 258 TPQ 250
            P+
Sbjct: 180 LPK 182

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>EXFAB_COTJA (Q9I9P7) Extracellular fatty acid-binding protein precursor|
           (Ex-FABP) (Lipocalin Q83)
          Length = 178

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = -1

Query: 435 KLPYDVLATDYDNYAV-----VSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPS 271
           K   +VL TDY +YAV     V   +    +++YSR+P   P     ++  A    Y   
Sbjct: 103 KKKVEVLDTDYKSYAVIYATRVKDGRTLHMMRLYSRSPEVSPAATAIFRKLAGERNYTDE 162

Query: 270 KIKDTPQDCEVSSDQL 223
            +   P+  E + D++
Sbjct: 163 MVAMLPRQEECTVDEV 178

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>CRA2_HOMGA (P80007) Crustacyanin-A2 subunit|
          Length = 174

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -1

Query: 447 PFIPKLPYDVLATDYDNYAVVSGAKDT-----SFIQIYSRTPNPGPEFIEK 310
           P +   PY+V+ TDY+ Y+ V     T      F  ++SRTP      +EK
Sbjct: 96  PSVFAAPYEVIETDYETYSCVYSCITTDNYKSEFAFVFSRTPQTSGPAVEK 146

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>PTGDS_PIG (Q29095) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 189

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
 Frame = -1

Query: 432 LPYDVLATDYDNYAVVSGAKDTS------FIQIYSRTPNPGPEFIEKYKSYAAGFGYDPS 271
           L   V+ TDY NYA++      S         +YSR+  PG    EK+ ++A   G+   
Sbjct: 114 LEVSVVETDYKNYALLHTESGPSPGPAFRMATLYSRSQAPGAAVREKFTAFAKARGFTED 173

Query: 270 KIKDTPQD 247
            I   P++
Sbjct: 174 GIVFLPRN 181

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>NHR18_CAEEL (O16360) Nuclear hormone receptor family member nhr-18|
          Length = 394

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = -1

Query: 546 VQCLSQEDMASAETDLEKEEMIS-SKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAKD 370
           + C   +  +  +T ++   +++ ++  L+ PT   +P    + LAT  DN   V   K+
Sbjct: 107 ILCCEPDRASVLKTTIDVTRLVNIARDMLQKPTNHVLPSNSLEQLATTLDNMRCVESNKE 166

Query: 369 TSFIQIYSRTPNPGPEFIEKYKSYAAGF 286
             FI+ Y +        +E  KS+  GF
Sbjct: 167 VKFIEKYGK--------VETLKSWEQGF 186

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>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2|
          Length = 1514

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -3

Query: 313  EVQVICCRLRLRPEQDQGHAXGLRGVLGPASADDVYARDGRGPD 182
            EVQ +C  L   P Q   H   +  VLGPA  D  + R  RGPD
Sbjct: 1449 EVQALCHHLATGPGQLSFHKGDILRVLGPARGD--WLRCSRGPD 1490

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>PTGDS_BOVIN (O02853) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = -1

Query: 420 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           V  TDY+ YA++         +D     +YSR+ NP  E  E + ++A   G+    I  
Sbjct: 120 VAETDYETYALLYTEGVRGPGQDFRMATLYSRSQNPRAEVKEHFTTFAKSLGFTEEGIVF 179

Query: 258 TPQ 250
            P+
Sbjct: 180 LPK 182

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>LAZA_SCHAM (P49291) Lazarillo protein precursor|
          Length = 214

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
 Frame = -1

Query: 474 KCFLRFPTLPFIPKLPYDVLATDYDNYAVV-------SGAKDTSFIQIYSRTPNPGPEFI 316
           K  + FP  P +    Y +L+TDYDNY++V         A  T    I  R+ N     +
Sbjct: 107 KLSVHFPNSPSVGN--YWILSTDYDNYSIVWSCVKRPDSAASTEISWILLRSRNSSNMTL 164

Query: 315 EKYKSYAAGFGYDPSKIKDTPQDCE 241
           E+ +        D +K   T Q  +
Sbjct: 165 ERVEDELKNLQLDLNKYTKTEQSAK 189

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>ISW1_YEAST (P38144) Chromatin remodelling complex ATPase chain ISW1 (EC 3.6.1.-)|
          Length = 1129

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
 Frame = -1

Query: 408  DYDNYAVVSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQDCEVSSD 229
            ++  +  VSG    + IQ  +R   PG + +E+ ++YA  F  +  +I+D  +  ++  +
Sbjct: 891  EFRKFITVSGKYGRNSIQAIARELAPG-KTLEEVRAYAKAFWSNIERIEDYEKYLKIIEN 949

Query: 228  QLAQMMSMPGMDEAL-------TNQFPDLKLK 154
            +  ++  +    EAL        N F DLKLK
Sbjct: 950  EEEKIKRVKMQQEALRRKLSEYKNPFFDLKLK 981

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>CRC1_HOMGA (P80029) Crustacyanin-C1 subunit|
          Length = 181

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = -1

Query: 429 PYDVLATDYDNYAVVSGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 268
           P  +L TDY NYA +    D      + F  I+SR+ N   ++++K ++       D ++
Sbjct: 104 PLVILETDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTR 163

Query: 267 IKDTPQ 250
              T Q
Sbjct: 164 FVKTVQ 169

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>CRA1_HOMGA (P58989) Crustacyanin-A1 subunit|
          Length = 181

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = -1

Query: 429 PYDVLATDYDNYAVVSGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 268
           P  +L TDY NYA +    D      + F  I+SR+ N   ++++K ++       D ++
Sbjct: 104 PLVILETDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTR 163

Query: 267 IKDTPQ 250
              T Q
Sbjct: 164 FVKTVQ 169

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>VL2_HPV55 (Q80939) Minor capsid protein L2|
          Length = 460

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
 Frame = -1

Query: 429 PYDVLATDYDNYAVVSGAKDTSFIQIYSRTPNPGPEFIEK--YKSYAAGFGYDPSKIKDT 256
           P    A + + + +V+ A DTS   IY+    P P+F E+    S++    +  S +  T
Sbjct: 326 PISAAAEEIELHPLVATAHDTSLFDIYA---EPDPDFTEEPVPLSFSTSTPFQRSSVSAT 382

Query: 255 PQDCEVSSDQLAQMMSMPGMDEALTNQFPDLKLKSSVAFDPFTSVTQTL 109
           P             +S+PG  +      PD+   ++    P++ VT  L
Sbjct: 383 PW------GNTTVPLSLPG--DMFVQPGPDIIFPTASTTTPYSPVTPAL 423

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>PURP_CHICK (P08938) Purpurin precursor|
          Length = 196

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
 Frame = -1

Query: 426 YDVLATDYDNYAVV--------SGAKDTSFIQIYSRTPNPGPEFIEK 310
           Y V+ TDYDNYA+          G+ D  +  I+SR P   P  I++
Sbjct: 126 YWVIDTDYDNYAITYACRSLKEDGSCDDGYSLIFSRNPRGLPPAIQR 172

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>FOS_AVINK (P23050) p55-v-Fos transforming protein|
          Length = 322

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = -3

Query: 277 PEQDQGHAXGLRGVLGPASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEAR 98
           P Q++GH  G+     PA+    Y+R         PG   Q +GR   V +  P+ EE R
Sbjct: 42  PSQNRGHPYGVPAPAPPAA----YSRPAV---LKAPGGRGQSIGRRGKVEQLSPEEEEKR 94

Query: 97  R 95
           R
Sbjct: 95  R 95

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>FOS_CHICK (P11939) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 367

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = -3

Query: 277 PEQDQGHAXGLRGVLGPASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEAR 98
           P Q++GH  G+     PA+    Y+R         PG   Q +GR   V +  P+ EE R
Sbjct: 87  PSQNRGHPYGVPAPAPPAA----YSRPAV---LKAPGGRGQSIGRRGKVEQLSPEEEEKR 139

Query: 97  R 95
           R
Sbjct: 140 R 140

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>COMD5_RAT (Q9ERR2) COMM domain-containing protein 5 (Hypertension-related|
           calcium-regulated gene protein) (HCaRG)
          Length = 224

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +1

Query: 445 RECRESQKALAADHLLL---LEISLGTSHVLLRQALHLPP 555
           ++CRE+ + L A   L    L + L  +H LL+QAL LPP
Sbjct: 62  KDCREAVEQLGASANLSEERLAVLLAGTHTLLQQALRLPP 101

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>NGAL_MOUSE (P11672) Neutrophil gelatinase-associated lipocalin precursor|
           (NGAL) (p25) (SV-40-induced 24P3 protein) (Lipocalin-2)
          Length = 200

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
 Frame = -1

Query: 447 PFIPKLPYDVLATDYDNYAVV-----SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFG 283
           P +      V  TDY+ +A+V     S  K    I +Y RT    PE  E++  +A   G
Sbjct: 123 PQVQSYNVQVATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKSLG 182

Query: 282 Y-DPSKIKDTPQD 247
             D + I   P D
Sbjct: 183 LKDDNIIFSVPTD 195

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>EXFAB_CHICK (P21760) Extracellular fatty acid-binding protein precursor|
           (Ex-FABP) (Quiescence-specific protein) (p20K) (Ch21
           protein)
          Length = 178

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = -1

Query: 423 DVLATDYDNYAV-----VSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 259
           +VL TDY +YAV     V   +    +++YSR+    P  +  ++  A    Y    +  
Sbjct: 107 EVLDTDYKSYAVIFATRVKDGRTLHMMRLYSRSREVSPTAMAIFRKLARERNYTDEMVAV 166

Query: 258 TPQDCEVSSDQL 223
            P   E S D++
Sbjct: 167 LPSQEECSVDEV 178

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>FOS_PIG (O97930) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 380

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -3

Query: 229 PASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEARR 95
           P  +   Y+R   G  K +PG  AQ +GR   V +  P+ EE RR
Sbjct: 99  PTPSAGAYSR--AGAVKTMPGGRAQSIGRRGKVEQLSPEEEEKRR 141

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>YAN4_SCHPO (Q10070) Hypothetical protein C3H1.04c in chromosome I|
          Length = 601

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
 Frame = -1

Query: 549 KVQCLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGA-- 376
           K   +S    AS +  L K+ ++ S  F  FPTLP        + A +  N  ++S    
Sbjct: 18  KPYLISYHVRASTQNALLKQTVLQSSSFKSFPTLP-------RLAARNISNSGILSRTTP 70

Query: 375 ---KDTSFIQIYSRTPNPGPEFIEKYKS 301
              K  S ++ YS      PE + K +S
Sbjct: 71  VIIKQISMVRSYSSGDVENPEILNKNES 98

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>COMD5_MOUSE (Q8R395) COMM domain-containing protein 5|
          Length = 224

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +1

Query: 445 RECRESQKALAADHLLL---LEISLGTSHVLLRQALHLPP 555
           ++CRE+ + L A   L    L + L  +H LL+QAL LPP
Sbjct: 62  KDCREAVQHLGASANLSEERLAVLLAGTHTLLQQALRLPP 101

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>MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) (Proteolipid|
           protein-binding protein) (PLPB1)
          Length = 1121

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 193 RGPDKPVPGPEAQVVGRVRPVHERDPDPEEARRSV 89
           RGP+ P P PE  V+  VR   ++D D    + +V
Sbjct: 329 RGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTV 363

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>MUP3_MOUSE (P04939) Major urinary protein 3 precursor (MUP 3) (Non-group|
           1/group 2 MUP15)
          Length = 184

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
 Frame = -1

Query: 426 YDVLATDYDNYAVV-----SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIK 262
           + +L TDYDNY ++        K    +++Y R P+   +  EK+       G     I 
Sbjct: 112 FSILKTDYDNYIMIHLINKKDGKTFQLMELYGREPDLSLDIKEKFAKLCEEHGIIRENII 171

Query: 261 D 259
           D
Sbjct: 172 D 172

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>YFCB_ECOLI (P39199) Hypothetical adenine-specific methylase yfcB (EC 2.1.1.72)|
          Length = 310

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/63 (23%), Positives = 32/63 (50%)
 Frame = -1

Query: 594 CVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVL 415
           C +  PD  +  +      +S + +A AE ++E+  +I +   +R      +PK+ YD++
Sbjct: 150 CAYAFPDAEVDAVD-----ISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLI 204

Query: 414 ATD 406
            T+
Sbjct: 205 VTN 207

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>DRL29_ARATH (Q9SZA7) Probable disease resistance protein At4g33300|
          Length = 832

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
 Frame = -1

Query: 615 AIKVKTFCVHGSPDGYITGI-----RGKVQCLSQED--MASAETDLEKEEMISSKCFLRF 457
           A+KV    ++G P+ Y  G+     +G+    S E   +   E  L+  +  +  CFL  
Sbjct: 380 ALKVTGASLNGKPEMYWKGVLQRLSKGEPADDSHESRLLRQMEASLDNLDQTTKDCFLDL 439

Query: 456 PTLPFIPKLPYDVL 415
              P   K+P DVL
Sbjct: 440 GAFPEDRKIPLDVL 453

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>BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -1

Query: 426 YDVLATDYD-NYAVVSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 268
           Y+V+A D +  +A+V G  D  ++ I SRTP    E  ++  + A   G+D SK
Sbjct: 116 YNVIALDREYRHALVCGP-DRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168

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>BLC_ECO57 (P0A902) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -1

Query: 426 YDVLATDYD-NYAVVSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 268
           Y+V+A D +  +A+V G  D  ++ I SRTP    E  ++  + A   G+D SK
Sbjct: 116 YNVIALDREYRHALVCGP-DRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168

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>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2|
          Length = 1516

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -3

Query: 313  EVQVICCRLRLRPEQDQGHAXGLRGVLGPASADDVYARDGRGPD 182
            EVQ +C  L   P Q   H   +  VLG A  D  + R  RGPD
Sbjct: 1451 EVQALCHHLATGPGQLSFHKGDILRVLGRAGGD--WLRCSRGPD 1492


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,906,201
Number of Sequences: 219361
Number of extensions: 1706323
Number of successful extensions: 5590
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 5284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5561
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result