| Clone Name | rbags3a24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | S28A1_PIG (O62667) Sodium/nucleoside cotransporter 1 (Na(+)/nucl... | 30 | 9.3 |
|---|
>S28A1_PIG (O62667) Sodium/nucleoside cotransporter 1 (Na(+)/nucleoside| cotransporter 1) (Sodium-coupled nucleoside transporter 1) (Concentrative nucleoside transporter 1) (CNT 1) Length = 647 Score = 29.6 bits (65), Expect = 9.3 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 11/77 (14%) Frame = +1 Query: 286 AQPEHLGKXGLNP--------RPNTS---WMNRGLCXTSFLLIILIRNSVWFQTEQNKSS 432 A PEHLG+ L P R +T W+ GL T+F +LI + FQ ++ Sbjct: 54 AGPEHLGRRSLQPALRVRRFCREHTQLFRWICTGLLCTAFAAFLLIACLLDFQ----RAL 109 Query: 433 VH*KAFCIMSCSLSHTL 483 FC++ L+H+L Sbjct: 110 ALFVLFCVVLFFLAHSL 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,954,697 Number of Sequences: 219361 Number of extensions: 1371590 Number of successful extensions: 2184 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2159 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2184 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7026286028 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)