| Clone Name | rbags3a19 |
|---|---|
| Clone Library Name | barley_pub |
>TPIC_SECCE (P46225) Triosephosphate isomerase, chloroplast precursor (EC| 5.3.1.1) (TIM) (Triose-phosphate isomerase) Length = 298 Score = 53.1 bits (126), Expect = 3e-07 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 438 VGGASLKGPDFATICNSVTSKKVTA 364 VGGASLKGPDFATICNSVTSKKVTA Sbjct: 274 VGGASLKGPDFATICNSVTSKKVTA 298
>TPIC_ARATH (Q9SKP6) Triosephosphate isomerase, chloroplast precursor (EC| 5.3.1.1) (TIM) (Triose-phosphate isomerase) Length = 315 Score = 45.8 bits (107), Expect = 5e-05 Identities = 22/25 (88%), Positives = 23/25 (92%) Frame = -3 Query: 438 VGGASLKGPDFATICNSVTSKKVTA 364 VGGASLKGP+FATI NSVTSKKV A Sbjct: 291 VGGASLKGPEFATIVNSVTSKKVAA 315
>TPIC_FRAAN (Q9M4S8) Triosephosphate isomerase, chloroplast precursor (EC| 5.3.1.1) (TIM) (Triose-phosphate isomerase) Length = 314 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/25 (84%), Positives = 23/25 (92%) Frame = -3 Query: 438 VGGASLKGPDFATICNSVTSKKVTA 364 VGGASLKGP+FATI N+VTSKKV A Sbjct: 290 VGGASLKGPEFATIVNAVTSKKVAA 314
>TPIC_SPIOL (P48496) Triosephosphate isomerase, chloroplast precursor (EC| 5.3.1.1) (TIM) (Triose-phosphate isomerase) Length = 322 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/25 (84%), Positives = 23/25 (92%) Frame = -3 Query: 438 VGGASLKGPDFATICNSVTSKKVTA 364 VGGASLKGP+FATI NSVT+KKV A Sbjct: 298 VGGASLKGPEFATIVNSVTAKKVAA 322
>TPIS_STELP (P48497) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 257 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/25 (84%), Positives = 23/25 (92%) Frame = -3 Query: 438 VGGASLKGPDFATICNSVTSKKVTA 364 VGGASLKGP+FATI NSVT+KKV A Sbjct: 233 VGGASLKGPEFATIINSVTAKKVAA 257
>O52A1_HUMAN (Q9UKL2) Olfactory receptor 52A1 (HPFH1OR) (Odorant receptor| HOR3'beta4) Length = 312 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/33 (54%), Positives = 19/33 (57%) Frame = +2 Query: 98 RFGSHGAPISHFLTH*PSCFSLITYFLLPPFLN 196 RFGSH P H L FS I Y L+PPFLN Sbjct: 266 RFGSHIPPYIHIL------FSSI-YLLVPPFLN 291 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,022,283 Number of Sequences: 219361 Number of extensions: 1282523 Number of successful extensions: 2726 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2644 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2724 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)