ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags3a09 |
|---|---|
| Clone Library Name | barley_pub |
>MTNN_TREPA (P96122) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 269 Score = 44.3 bits (103), Expect = 2e-04 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 2/95 (2%) Frame = -3 Query: 490 RVTRVSKG--CSANVFXDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXX 317 RV+R+ +G S ++F +A+ R + ++FG VEME AA A VA GVPF+ IR Sbjct: 158 RVSRLVEGRVASGDLFVSDAQTRARIIREFGAHGVEMEGAAFAHVASVNGVPFVIIRCIS 217 Query: 316 XXXXXXXXXGNEASTFIDIAAKNAVQVMLKFVPLL 212 F AA+ + + L+ + L Sbjct: 218 DGAGAEQDVSMSYKEFSTRAARRSALLTLRVLERL 252
>MTNN_HELPY (O24915) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 231 Score = 37.4 bits (85), Expect = 0.028 Identities = 24/81 (29%), Positives = 36/81 (44%) Frame = -3 Query: 463 SANVFXDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXGN 284 S + F + E ++FL +F + VEME A+VA V GVP +R Sbjct: 150 SGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLR------SISDNADE 203 Query: 283 EASTFIDIAAKNAVQVMLKFV 221 EA+ D + + Q KF+ Sbjct: 204 EANMSFDAFLEKSAQTSAKFL 224
>MTNN_HELPJ (Q9ZMY2) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 230 Score = 35.4 bits (80), Expect = 0.11 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = -3 Query: 463 SANVFXDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIR 326 S + F + E ++FL +F + VEME A+VA V GVP +R Sbjct: 149 SGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLR 194
>BSPB_POPDE (Q09117) Bark storage protein B precursor| Length = 312 Score = 35.0 bits (79), Expect = 0.14 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = -3 Query: 541 MELPACVNATTCLPRAPRVTRVSKGCSANVFXDNAEYRQFLRKQFGCTPVEMESAAVALV 362 M+L C + CLP P+V SK +++ + N Y FL F + SA+VAL Sbjct: 200 MKLRKCYS-DECLPGEPKVVFGSKSSTSDFYVRNKAYGDFLNDNFDAKTADTTSASVALT 258 Query: 361 A 359 + Sbjct: 259 S 259
>BSPA_POPDE (Q07469) Bark storage protein A precursor| Length = 312 Score = 35.0 bits (79), Expect = 0.14 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = -3 Query: 541 MELPACVNATTCLPRAPRVTRVSKGCSANVFXDNAEYRQFLRKQFGCTPVEMESAAVALV 362 M+L C + CLP P+V SK +++ + N Y FL F + SA+VAL Sbjct: 200 MKLRKCYS-DECLPGKPKVVFGSKSSTSDFYVRNKAYGDFLNDNFDAKTADTASASVALT 258 Query: 361 A 359 + Sbjct: 259 S 259
>MTNN_HAEIN (P45113) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 229 Score = 33.9 bits (76), Expect = 0.31 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Frame = -3 Query: 466 CSANVFXDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXX 290 CS + F ++ + ++ F T VEME+ A+A V + VPF+ +R Sbjct: 146 CSGDSFINSEDKIAQIKADFPNVTGVEMEATAIAQVCYAFNVPFVVVRAISDGGDGKASM 205 Query: 289 GNEASTFIDIAAKNAVQVMLKFVPLL 212 E F+ +AAK + ++L + L Sbjct: 206 SFE--EFLPLAAKQSSALVLGMIDRL 229
>MTNN_MYCTU (P67656) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 255 Score = 33.5 bits (75), Expect = 0.41 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = -3 Query: 430 RQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXGNEASTFIDIAAK 251 R L + G VEME AVA + + +P+L IR + + F+ A Sbjct: 182 RNRLHHELGGMAVEMEGGAVAQICASFDIPWLVIRALSDLAGADSGV--DFNRFVGEVAA 239 Query: 250 NAVQVMLKFVPLL 212 ++ +V+L+ +P+L Sbjct: 240 SSARVLLRLLPVL 252
>MTNN_MYCBO (P67657) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 255 Score = 33.5 bits (75), Expect = 0.41 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = -3 Query: 430 RQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXGNEASTFIDIAAK 251 R L + G VEME AVA + + +P+L IR + + F+ A Sbjct: 182 RNRLHHELGGMAVEMEGGAVAQICASFDIPWLVIRALSDLAGADSGV--DFNRFVGEVAA 239 Query: 250 NAVQVMLKFVPLL 212 ++ +V+L+ +P+L Sbjct: 240 SSARVLLRLLPVL 252
>MTNN_BACSU (O32028) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 231 Score = 32.0 bits (71), Expect = 1.2 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%) Frame = -3 Query: 481 RVSKGCSA--NVFXDNAEYRQFLRKQFG-CTPVEMESAAVALVAHTQGVPFLTIRXXXXX 311 +V+KG A + F ++ + + +R +F VEME+AAVA V H PF+ IR Sbjct: 140 QVAKGTIATGDSFMNDPKRVEEVRARFSDLYAVEMEAAAVAQVCHQFKTPFVVIRALSDI 199 Query: 310 XXXXXXXGNEASTFIDIAAKNAVQVMLKFV 221 + F++ AA ++ +++LK + Sbjct: 200 AGKESHVSFD--QFLEQAAVHSTELVLKVI 227
>DEOD_CLOTE (Q894Z3) Purine nucleoside phosphorylase deoD-type (EC 2.4.2.1)| (PNP) Length = 235 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = -3 Query: 463 SANVFXDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTI 329 S+++F D+ + ++GC VEME+AA+ +A GV LT+ Sbjct: 155 SSDIFYDDDKEDWKTWAKYGCLGVEMETAALYTIAAKYGVNALTL 199
>MTNN_SALTY (P60217) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -3 Query: 394 VEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXGNEASTFIDIAAKNAVQVMLKFVPL 215 VEME+ A+A V H VPF+ +R + F+ +AAK + ++ V Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFD--EFLAVAAKQSTLMVETLVQK 228 Query: 214 L 212 L Sbjct: 229 L 229
>MTNN_SALTI (P60216) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -3 Query: 394 VEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXGNEASTFIDIAAKNAVQVMLKFVPL 215 VEME+ A+A V H VPF+ +R + F+ +AAK + ++ V Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFD--EFLAVAAKQSTLMVETLVQK 228 Query: 214 L 212 L Sbjct: 229 L 229
>ARGD_XYLFT (Q87DM8) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 411 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 6/40 (15%) Frame = -3 Query: 283 EASTFIDIAAKNAVQVM------LKFVPLLGKSAEEMDDG 182 +AS +++AA++ V ++ L+FVP L S EE+ DG Sbjct: 355 QASAILEVAAEHGVLLLQAGPDVLRFVPALNVSDEELADG 394
>MTNN_SHIFL (P0AF15) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 394 VEMESAAVALVAHTQGVPFLTIR 326 VEME+ A+A V H VPF+ +R Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVR 193
>MTNN_ECOLI (P0AF12) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 394 VEMESAAVALVAHTQGVPFLTIR 326 VEME+ A+A V H VPF+ +R Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVR 193
>MTNN_ECOL6 (P0AF13) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 394 VEMESAAVALVAHTQGVPFLTIR 326 VEME+ A+A V H VPF+ +R Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVR 193
>MTNN_ECO57 (P0AF14) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 394 VEMESAAVALVAHTQGVPFLTIR 326 VEME+ A+A V H VPF+ +R Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVR 193 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,945,254 Number of Sequences: 219361 Number of extensions: 782303 Number of successful extensions: 2232 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2210 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2232 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
