ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags3a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|D88272.1| Hordeum vulgare mRNA for formate dehydrogenase, co... 674 0.0
2dbj|AK104788.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 3e-66
3dbj|AK065872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 3e-66
4gb|BT016309.1| Zea mays clone Contig142 mRNA sequence 222 6e-55
5dbj|AB019533.1| Oryza sativa mRNA for Nad-dependent formate dehy... 220 2e-54
6dbj|AK064610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 9e-54
7gb|AY111955.1| Zea mays CL15209_1 mRNA sequence 218 9e-54
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 149 7e-33
9dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic D... 149 7e-33
10dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic D... 149 7e-33
11emb|Z21493.2|MISTFDHD Solanum tuberosum mRNA for formate dehydro... 123 4e-25
12emb|AJ849378.1| Lycopersicon esculentum mRNA for formate dehydro... 115 1e-22
13emb|Z99992.1|STZ99992 Solanum tuberosum fdh1 gene encoding forma... 88 2e-14
14emb|AJ577266.2|QRO577266 Quercus robur mRNA for formate dehydrog... 72 1e-09
15ref|NM_121482.2| Arabidopsis thaliana FDH (FORMATE DEHYDROGENASE... 66 8e-08
16gb|AY081734.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, comp... 66 8e-08
17gb|AF208029.1|AF208029 Arabidopsis thaliana NAD-dependent format... 66 8e-08
18gb|AF208028.1|AF208028 Arabidopsis thaliana NAD-dependent format... 66 8e-08
19gb|AY054285.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, comp... 66 8e-08
20dbj|AK221844.1| Arabidopsis thaliana mRNA for formate dehydrogen... 66 8e-08
21gb|AY039609.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, comp... 66 8e-08
22dbj|AB023897.1| Arabidopsis thaliana fdh mRNA for formate dehydr... 66 8e-08
23gb|AF217195.1|AF217195 Arabidopsis thaliana formate dehydrogenas... 66 8e-08
24gb|AY089191.1| Arabidopsis thaliana clone 7530 mRNA, complete se... 66 8e-08
25gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map M... 64 3e-07
26emb|AJ004829.1|STAJ4829 Solanum tuberosum fdh3 pseudogene 64 3e-07
27emb|AJ300721.1|PPI300721 Pinus pinaster partial mRNA for putativ... 54 3e-04
28ref|XM_659037.1| Aspergillus nidulans FGSC A4 formate dehydrogen... 48 0.019
29emb|Z11612.1|ANACIAG A.nidulans aciA gene for AciA protein 48 0.019
30dbj|AK109022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.019
31emb|AL391149.1|ATT9L3 Arabidopsis thaliana DNA chromosome 5, BAC... 46 0.075
32gb|AF439732.1|AF439732 Zea mays formate dehydrogenase mRNA, part... 44 0.30
33emb|BX833670.1|CNS0A1M3 Arabidopsis thaliana Full-length cDNA Co... 44 0.30
34ref|XM_361560.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.2
35gb|AY850352.1| Magnaporthe grisea formate dehydrogenase-like pro... 42 1.2
36gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome... 40 4.6
37ref|XM_501117.1| Yarrowia lipolytica CLIB122, YALI0B19976g predi... 40 4.6
38emb|X81129.1|CMNADDFD C.methylica gene for NAD-dependent formate... 40 4.6
39emb|AJ245934.1|CBO245934 Candida boidinii fdh3 gene for NAD-depe... 40 4.6
40emb|BX927231.12| Zebrafish DNA sequence from clone DKEYP-26F11 i... 40 4.6
41gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome... 40 4.6
42gb|AF004096.1|AF004096 Candida boidinii NAD-dependent formate de... 40 4.6
43emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 4.6
44emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 4.6

>dbj|D88272.1| Hordeum vulgare mRNA for formate dehydrogenase, complete cds
          Length = 1380

 Score =  674 bits (340), Expect = 0.0
 Identities = 346/348 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    tggttgcacccccaggcagacatccattatttccgttctcagagaacgctcatacaacaa 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 tggttgcacccccaggcagacatccattatttccgttctcagagaacgctcatacaacaa 1280

                                                                        
Query: 62   cacaatggtttcttctctcacgcctcgcttcagagttcaaatatgttaccatgcagcgtc 121
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1279 cacaatggtttcttctctcacgcctcgcttcatagttcaaatatgttaccatgcagcgtc 1220

                                                                        
Query: 122  ggaggggttgggttactacttgtactggctggcgagctcgccttccttgacgatgtagtt 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 ggaggggttgggttactacttgtactggctggcgagctcgccttccttgacgatgtagtt 1160

                                                                        
Query: 182  ctccacggggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgc 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 ctccacggggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgc 1100

                                                                        
Query: 242  gtacctcagctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattagg 301
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1099 gtacctcagctgtgcatcaattgtagtcccagaaatgtgaggggtcattgcgtgattagg 1040

                                                            
Query: 302  catgtagcgccatgggtgatccttgggtgcgggttgggggaaccagac 349
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 catgtagcgccatgggtgatccttgggtgcgggttgggggaaccagac 992



to top

>dbj|AK104788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E04, full
            insert sequence
          Length = 1637

 Score =  260 bits (131), Expect = 3e-66
 Identities = 197/219 (89%)
 Strand = Plus / Minus

                                                                        
Query: 131  gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190
            |||||| |||| ||||||||| |||||||  |||||||||||||||||||||| ||| ||
Sbjct: 1222 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 1163

                                                                        
Query: 191  gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250
            ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| |||||
Sbjct: 1162 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 1103

                                                                        
Query: 251  ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
            ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||
Sbjct: 1102 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 1043

                                                   
Query: 311  ccatgggtgatccttgggtgcgggttgggggaaccagac 349
            ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 1042 ccatgggtgatcctttggtgctggttgggggaaccagac 1004



to top

>dbj|AK065872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048A01, full
            insert sequence
          Length = 1648

 Score =  260 bits (131), Expect = 3e-66
 Identities = 197/219 (89%)
 Strand = Plus / Minus

                                                                        
Query: 131  gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190
            |||||| |||| ||||||||| |||||||  |||||||||||||||||||||| ||| ||
Sbjct: 1233 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 1174

                                                                        
Query: 191  gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250
            ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| |||||
Sbjct: 1173 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 1114

                                                                        
Query: 251  ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
            ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||
Sbjct: 1113 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 1054

                                                   
Query: 311  ccatgggtgatccttgggtgcgggttgggggaaccagac 349
            ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 1053 ccatgggtgatcctttggtgctggttgggggaaccagac 1015



to top

>gb|BT016309.1| Zea mays clone Contig142 mRNA sequence
          Length = 1507

 Score =  222 bits (112), Expect = 6e-55
 Identities = 181/204 (88%)
 Strand = Plus / Minus

                                                                        
Query: 143  gtactggctggcgagctcgccttccttgacgatgtagttctccacggggaactcctcgcc 202
            |||||| ||||| |||| ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 1223 gtactgactggcaagctggccttccttgacgatgtagttctgcacggggaagtcctcgcc 1164

                                                                        
Query: 203  cttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatcaat 262
            |||||| ||||||| || ||||||| |||| ||| |||| |||| |||||| ||||||||
Sbjct: 1163 cttgaaatacctattcagcatgtccctcacaccatccgcataccgcagctgcgcatcaat 1104

                                                                        
Query: 263  tgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcgccatgggtgatc 322
            ||||||||||||||||||||||||||| || || || |||||||||||||| ||||||||
Sbjct: 1103 tgtagtcccagagatgtgaggggtcatggcatggtttggcatgtagcgccaggggtgatc 1044

                                    
Query: 323  cttgggtgcgggttgggggaacca 346
            ||| ||||| || || ||||||||
Sbjct: 1043 ctttggtgctggctgtgggaacca 1020



to top

>dbj|AB019533.1| Oryza sativa mRNA for Nad-dependent formate dehydrogenase, complete
            cds
          Length = 1449

 Score =  220 bits (111), Expect = 2e-54
 Identities = 192/219 (87%)
 Strand = Plus / Minus

                                                                        
Query: 131  gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190
            |||||| |||| ||||||||| |||||||  |||||||||||||||||||||| ||| ||
Sbjct: 1236 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 1177

                                                                        
Query: 191  gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250
            ||| || || || ||||||||||| |||| ||||||||| ||||| || ||||| |||||
Sbjct: 1176 gaagtcttcccctttgaagtacctgtccagcatgtccttaactcctgctgcgtatctcag 1117

                                                                        
Query: 251  ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
            ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||
Sbjct: 1116 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtaccg 1057

                                                   
Query: 311  ccatgggtgatccttgggtgcgggttgggggaaccagac 349
            ||| ||  || |||| ||||| |||||||||||||||||
Sbjct: 1056 ccagggtggaccctttggtgctggttgggggaaccagac 1018



to top

>dbj|AK064610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B06, full
            insert sequence
          Length = 1872

 Score =  218 bits (110), Expect = 9e-54
 Identities = 182/206 (88%)
 Strand = Plus / Minus

                                                                        
Query: 144  tactggctggcgagctcgccttccttgacgatgtagttctccacggggaactcctcgccc 203
            |||||||||||||||| |||| |||||||||||||||||| | | ||||| ||||| || 
Sbjct: 1678 tactggctggcgagctggcctgccttgacgatgtagttctgcgccgggaagtcctcccct 1619

                                                                        
Query: 204  ttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatcaatt 263
            ||||| ||||| |||| ||||||||| || || |||||||| ||||||||| ||||||||
Sbjct: 1618 ttgaaatacctgtccagcatgtcctttacccccgccgcgtatctcagctgtccatcaatt 1559

                                                                        
Query: 264  gtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcgccatgggtgatcc 323
            ||||||||||||  |||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 1558 gtagtcccagagcagtgaggggtcatagcgtgattgggcatgtatcgccatgggtgatcc 1499

                                      
Query: 324  ttgggtgcgggttgggggaaccagac 349
            || ||||| || ||||||||||||||
Sbjct: 1498 tttggtgctggctgggggaaccagac 1473



to top

>gb|AY111955.1| Zea mays CL15209_1 mRNA sequence
          Length = 1667

 Score =  218 bits (110), Expect = 9e-54
 Identities = 167/186 (89%)
 Strand = Plus / Minus

                                                                        
Query: 161  gccttccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaa 220
            ||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||| 
Sbjct: 1210 gccttccttgacgatgtagttctgcaccgggaagtcctcgcccttgaaatacctatccag 1151

                                                                        
Query: 221  catgtccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtg 280
            ||||||| |||| ||| |||| |||| |||||| ||||||||||||||||||||||||||
Sbjct: 1150 catgtccctcacaccatccgcataccgcagctgcgcatcaattgtagtcccagagatgtg 1091

                                                                        
Query: 281  aggggtcattgcgtgattaggcatgtagcgccatgggtgatccttgggtgcgggttgggg 340
            ||||||||| || || ||||||||||||||||| ||||||||||| ||||| || || ||
Sbjct: 1090 aggggtcatggcatggttaggcatgtagcgccaggggtgatcctttggtgctggctgtgg 1031

                  
Query: 341  gaacca 346
            ||||||
Sbjct: 1030 gaacca 1025



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  149 bits (75), Expect = 7e-33
 Identities = 93/99 (93%)
 Strand = Plus / Minus

                                                                            
Query: 251      ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
                ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||
Sbjct: 16434100 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 16434041

                                                       
Query: 311      ccatgggtgatccttgggtgcgggttgggggaaccagac 349
                ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 16434040 ccatgggtgatcctttggtgctggttgggggaaccagac 16434002



 Score =  117 bits (59), Expect = 2e-23
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                            
Query: 251      ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
                |||| ||||||||||||||||||||  |||||||||||| || ||||| |||||||| ||
Sbjct: 16463964 ctgtccatcaattgtagtcccagagcagtgaggggtcatagcatgattgggcatgtatcg 16463905

                                                       
Query: 311      ccatgggtgatccttgggtgcgggttgggggaaccagac 349
                ||||||||||||||| ||||| || ||||||||||||||
Sbjct: 16463904 ccatgggtgatcctttggtgctggctgggggaaccagac 16463866



 Score =  117 bits (59), Expect = 2e-23
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                            
Query: 131      gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190
                |||||| |||| ||||||||| |||||||  |||||||||||||||||||||| ||| ||
Sbjct: 16434684 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 16434625

                                                                            
Query: 191      gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250
                ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| |||||
Sbjct: 16434624 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 16434565

                   
Query: 251      ctg 253
                |||
Sbjct: 16434564 ctg 16434562



 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                            
Query: 131      gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190
                |||||| ||||  |||||||||||||||| |||| |||||||||||||||||| | | ||
Sbjct: 16464698 gggttattactgatactggctggcgagctggcctgccttgacgatgtagttctgcgccgg 16464639

                                                                            
Query: 191      gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250
                ||| ||||| || ||||| ||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 16464638 gaagtcctcccctttgaaatacctgtccagcatgtcctttacccccgccgcgtatctcag 16464579

                  
Query: 251      ct 252
                ||
Sbjct: 16464578 ct 16464577



to top

>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0404G03
          Length = 135225

 Score =  149 bits (75), Expect = 7e-33
 Identities = 93/99 (93%)
 Strand = Plus / Minus

                                                                         
Query: 251   ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
             ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||
Sbjct: 43418 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 43359

                                                    
Query: 311   ccatgggtgatccttgggtgcgggttgggggaaccagac 349
             ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 43358 ccatgggtgatcctttggtgctggttgggggaaccagac 43320



 Score =  117 bits (59), Expect = 2e-23
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                         
Query: 251   ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
             |||| ||||||||||||||||||||  |||||||||||| || ||||| |||||||| ||
Sbjct: 73282 ctgtccatcaattgtagtcccagagcagtgaggggtcatagcatgattgggcatgtatcg 73223

                                                    
Query: 311   ccatgggtgatccttgggtgcgggttgggggaaccagac 349
             ||||||||||||||| ||||| || ||||||||||||||
Sbjct: 73222 ccatgggtgatcctttggtgctggctgggggaaccagac 73184



 Score =  117 bits (59), Expect = 2e-23
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                         
Query: 131   gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190
             |||||| |||| ||||||||| |||||||  |||||||||||||||||||||| ||| ||
Sbjct: 44002 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 43943

                                                                         
Query: 191   gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250
             ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| |||||
Sbjct: 43942 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 43883

                
Query: 251   ctg 253
             |||
Sbjct: 43882 ctg 43880



 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                         
Query: 131   gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190
             |||||| ||||  |||||||||||||||| |||| |||||||||||||||||| | | ||
Sbjct: 74016 gggttattactgatactggctggcgagctggcctgccttgacgatgtagttctgcgccgg 73957

                                                                         
Query: 191   gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250
             ||| ||||| || ||||| ||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 73956 gaagtcctcccctttgaaatacctgtccagcatgtcctttacccccgccgcgtatctcag 73897

               
Query: 251   ct 252
             ||
Sbjct: 73896 ct 73895



to top

>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0008F02
          Length = 139655

 Score =  149 bits (75), Expect = 7e-33
 Identities = 93/99 (93%)
 Strand = Plus / Minus

                                                                          
Query: 251    ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
              ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||
Sbjct: 110663 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 110604

                                                     
Query: 311    ccatgggtgatccttgggtgcgggttgggggaaccagac 349
              ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 110603 ccatgggtgatcctttggtgctggttgggggaaccagac 110565



 Score =  117 bits (59), Expect = 2e-23
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                          
Query: 131    gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190
              |||||| |||| ||||||||| |||||||  |||||||||||||||||||||| ||| ||
Sbjct: 111247 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 111188

                                                                          
Query: 191    gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250
              ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| |||||
Sbjct: 111187 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 111128

                 
Query: 251    ctg 253
              |||
Sbjct: 111127 ctg 111125



to top

>emb|Z21493.2|MISTFDHD Solanum tuberosum mRNA for formate dehydrogenase
          Length = 1262

 Score =  123 bits (62), Expect = 4e-25
 Identities = 134/158 (84%)
 Strand = Plus / Minus

                                                                        
Query: 189  gggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctc 248
            ||||| ||||| |||||||||||||| |||||||| |||||   |||||| || ||||||
Sbjct: 1099 gggaaatcctcacccttgaagtacctgtccaacatatcctttgttccagctgcatacctc 1040

                                                                        
Query: 249  agctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtag 308
            | |||||||||||| ||||||||||| |||||||| ||||| || || || |||||||||
Sbjct: 1039 aactgtgcatcaatggtagtcccagaaatgtgaggagtcatagcttggtttggcatgtag 980

                                                  
Query: 309  cgccatgggtgatccttgggtgcgggttgggggaacca 346
            ||||| || || |||||||| || ||||| ||| ||||
Sbjct: 979  cgccacggatggtccttgggagctggttgtgggtacca 942



to top

>emb|AJ849378.1| Lycopersicon esculentum mRNA for formate dehydrogenase (fdh gene)
          Length = 1572

 Score =  115 bits (58), Expect = 1e-22
 Identities = 133/158 (84%)
 Strand = Plus / Minus

                                                                        
Query: 189  gggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctc 248
            ||||| ||||| |||||||||||||| |||||||| |||||   |||||| || ||||||
Sbjct: 1243 gggaaatcctcacccttgaagtacctgtccaacatatcctttgttccagctgcatacctc 1184

                                                                        
Query: 249  agctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtag 308
            | |||||||||||| ||||||||||| |||||||| ||||| || || || |||||||| 
Sbjct: 1183 aactgtgcatcaatggtagtcccagaaatgtgaggagtcatagcttggtttggcatgtaa 1124

                                                  
Query: 309  cgccatgggtgatccttgggtgcgggttgggggaacca 346
            |||||| | || |||||||| || ||||| ||| ||||
Sbjct: 1123 cgccatagatggtccttgggagctggttgtgggtacca 1086



to top

>emb|Z99992.1|STZ99992 Solanum tuberosum fdh1 gene encoding formate dehydrogenase
          Length = 4392

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 251  ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
            |||||||||||| ||||||||||| |||||||| ||||| || || || |||||||||||
Sbjct: 4063 ctgtgcatcaatggtagtcccagaaatgtgaggagtcatagcttggtttggcatgtagcg 4004

                                                
Query: 311  ccatgggtgatccttgggtgcgggttgggggaacca 346
            |||||| || |||||||| || ||||| ||| ||||
Sbjct: 4003 ccatggatggtccttgggagctggttgtgggtacca 3968



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 189  gggaactcctcgcccttgaagtacctatccaacatgtcctt 229
            ||||| ||||| |||||||||||||| |||||||| |||||
Sbjct: 4237 gggaaatcctcacccttgaagtacctgtccaacatatcctt 4197



to top

>emb|AJ577266.2|QRO577266 Quercus robur mRNA for formate dehydrogenase (ORF1)
          Length = 1513

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 251  ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
            |||||||||||| || || ||||| || ||||||||||| || || |||||||| || ||
Sbjct: 1121 ctgtgcatcaatggtggtaccagaaatatgaggggtcatagcatggttaggcatataacg 1062

                                                
Query: 311  ccatgggtgatccttgggtgcgggttgggggaacca 346
            ||||||||| ||||| || || ||||| ||||||||
Sbjct: 1061 ccatgggtggtcctttggagcaggttgtgggaacca 1026



to top

>ref|NM_121482.2| Arabidopsis thaliana FDH (FORMATE DEHYDROGENASE); oxidoreductase,
            acting on the CH-OH group of donors, NAD or NADP as
            acceptor AT5G14780 (FDH) mRNA, complete cds
          Length = 1518

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1186 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1127

                                                                        
Query: 225  tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
            || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 1126 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1067

                                                     
Query: 285  gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
            ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1066 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1026



to top

>gb|AY081734.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds
          Length = 1155

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1127 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1068

                                                                        
Query: 225  tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
            || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 1067 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1008

                                                     
Query: 285  gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
            ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1007 gtcatagcctggttaggcatgtaacgccatggatggtcctt 967



to top

>gb|AF208029.1|AF208029 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1B (FDH1B)
            mRNA, complete cds
          Length = 1508

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1176 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1117

                                                                        
Query: 225  tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
            || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 1116 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1057

                                                     
Query: 285  gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
            ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1056 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1016



to top

>gb|AF208028.1|AF208028 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1A (FDH1A)
            mRNA, complete cds
          Length = 1439

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1184 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1125

                                                                        
Query: 225  tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
            || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 1124 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1065

                                                     
Query: 285  gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
            ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1064 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1024



to top

>gb|AY054285.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds
          Length = 1494

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1182 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1123

                                                                        
Query: 225  tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
            || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 1122 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1063

                                                     
Query: 285  gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
            ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1062 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1022



to top

>dbj|AK221844.1| Arabidopsis thaliana mRNA for formate dehydrogenase, complete cds,
           clone: RAFL22-04-J07
          Length = 739

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                       
Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
           |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 473 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 414

                                                                       
Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
           || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 413 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 354

                                                    
Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
           ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 353 gtcatagcctggttaggcatgtaacgccatggatggtcctt 313



to top

>gb|AY039609.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds
          Length = 1443

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1186 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1127

                                                                        
Query: 225  tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
            || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 1126 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1067

                                                     
Query: 285  gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
            ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1066 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1026



to top

>dbj|AB023897.1| Arabidopsis thaliana fdh mRNA for formate dehydrogenase, complete cds
          Length = 1381

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1127 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1068

                                                                        
Query: 225  tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
            || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 1067 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1008

                                                     
Query: 285  gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
            ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1007 gtcatagcctggttaggcatgtaacgccatggatggtcctt 967



to top

>gb|AF217195.1|AF217195 Arabidopsis thaliana formate dehydrogenase (FDH) mRNA, complete cds
          Length = 1490

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1186 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1127

                                                                        
Query: 225  tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
            || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 1126 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1067

                                                     
Query: 285  gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
            ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1066 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1026



to top

>gb|AY089191.1| Arabidopsis thaliana clone 7530 mRNA, complete sequence
          Length = 1514

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1184 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1125

                                                                        
Query: 225  tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284
            || |||   || ||||| ||||  ||||| || ||||| || || || ||| | ||||||
Sbjct: 1124 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1065

                                                     
Query: 285  gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
            ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1064 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1024



to top

>gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map MAP_LOC, complete
             sequence
          Length = 73587

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 81/96 (84%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                         
Query: 251   ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
             |||||||||||| ||||||||||| |||||||| ||||| || || || |||||||||||
Sbjct: 61627 ctgtgcatcaatggtagtcccaga-atgtgaggagtcatagcttggtttggcatgtagcg 61685

                                                 
Query: 311   ccatgggtgatccttgggtgcgggttgggggaacca 346
             |||  | || |||||||| || ||||| ||| ||||
Sbjct: 61686 ccacagatggtccttgggagctggttgtgggtacca 61721



 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 189   gggaactcctcgcccttgaagtacctatccaacat 223
             ||||| ||||| |||||||||||||| ||||||||
Sbjct: 61453 gggaaatcctcacccttgaagtacctgtccaacat 61487



to top

>emb|AJ004829.1|STAJ4829 Solanum tuberosum fdh3 pseudogene
          Length = 5868

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 81/96 (84%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                        
Query: 251  ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310
            |||||||||||| ||||||||||| |||||||| ||||| || || || |||||||||||
Sbjct: 4724 ctgtgcatcaatggtagtcccaga-atgtgaggagtcatagcttggtttggcatgtagcg 4666

                                                
Query: 311  ccatgggtgatccttgggtgcgggttgggggaacca 346
            |||  | || |||||||| || ||||| ||| ||||
Sbjct: 4665 ccacagatggtccttgggagctggttgtgggtacca 4630



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 189  gggaactcctcgcccttgaagtacctatccaacatgtcctt 229
            ||||| ||||| |||||||||||||| |||||||| |||||
Sbjct: 4898 gggaaatcctcacccttgaagtacctgtccaacatatcctt 4858



to top

>emb|AJ300721.1|PPI300721 Pinus pinaster partial mRNA for putative NAD-dependent formate
           dehydrogenase
          Length = 989

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 100/123 (81%), Gaps = 1/123 (0%)
 Strand = Plus / Minus

                                                                       
Query: 201 cccttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatca 260
           ||||||||||| || || | ||| ||||||  |||||| || ||||| | ||| ||||| 
Sbjct: 676 cccttgaagtatctgtctagcatatccttcgttccagctgcataccttatctgggcatct 617

                                                                       
Query: 261 attgtagt-cccagagatgtgaggggtcattgcgtgattaggcatgtagcgccatgggtg 319
           |||||||| ||||||||| || || ||||| || || || |||||| |||||||||| ||
Sbjct: 616 attgtagtccccagagatatggggagtcatggcatggtttggcatggagcgccatggatg 557

              
Query: 320 atc 322
           |||
Sbjct: 556 atc 554



to top

>ref|XM_659037.1| Aspergillus nidulans FGSC A4 formate dehydrogenase (AN6525.2), mRNA
          Length = 1134

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 314 tgggtgatccttgggtgcgggttgggggaaccagac 349
           |||||| |||||||| ||||| ||||||||||||||
Sbjct: 921 tgggtgctccttgggagcgggctgggggaaccagac 886



to top

>emb|Z11612.1|ANACIAG A.nidulans aciA gene for AciA protein
          Length = 3042

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 314  tgggtgatccttgggtgcgggttgggggaaccagac 349
            |||||| |||||||| ||||| ||||||||||||||
Sbjct: 2282 tgggtgctccttgggagcgggctgggggaaccagac 2247



to top

>dbj|AK109022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B02, full
            insert sequence
          Length = 1344

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 314  tgggtgatccttgggtgcgggttgggggaaccagac 349
            |||||| |||||||| ||||| ||||||||||||||
Sbjct: 1033 tgggtggtccttgggcgcgggctgggggaaccagac 998



to top

>emb|AL391149.1|ATT9L3 Arabidopsis thaliana DNA chromosome 5, BAC clone T9L3 (ESSA project)
          Length = 89370

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 279   tgaggggtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325
             ||||||||||| || || ||||||||||| |||||||| || |||||
Sbjct: 46019 tgaggggtcatagcctggttaggcatgtaacgccatggatggtcctt 45973



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 165   tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
             |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 46281 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 46222

               
Query: 225   tc 226
             ||
Sbjct: 46221 tc 46220



to top

>gb|AF439732.1|AF439732 Zea mays formate dehydrogenase mRNA, partial cds
          Length = 597

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 321 tccttgggtgcgggttgggggaacca 346
           ||||||||||| ||||||||||||||
Sbjct: 596 tccttgggtgctggttgggggaacca 571



to top

>emb|BX833670.1|CNS0A1M3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL6ZD02 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1428

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 165  tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224
            |||||||||||||| |||||    ||||| || || ||||||||||| || |||||||||
Sbjct: 1170 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1111

              
Query: 225  tc 226
            ||
Sbjct: 1110 tc 1109



to top

>ref|XM_361560.1| Magnaporthe grisea 70-15 hypothetical protein (MG04034.4) partial
           mRNA
          Length = 1092

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 321 tccttgggtgcgggttgggggaaccagac 349
           |||||||| ||||| ||||||||||||||
Sbjct: 863 tccttgggggcgggctgggggaaccagac 835



to top

>gb|AY850352.1| Magnaporthe grisea formate dehydrogenase-like protein mRNA, complete
            cds
          Length = 1514

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 321  tccttgggtgcgggttgggggaaccagac 349
            |||||||| ||||| ||||||||||||||
Sbjct: 1244 tccttgggggcgggctgggggaaccagac 1216



to top

>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence
          Length = 168940

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ttactacttgtactggctgg 153
              ||||||||||||||||||||
Sbjct: 109499 ttactacttgtactggctgg 109518



to top

>ref|XM_501117.1| Yarrowia lipolytica CLIB122, YALI0B19976g predicted mRNA
          Length = 1116

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 255 gcatcaattgtagtcccagagatgtgaggggtcattgcgt 294
           |||||||| | ||| |||||||| ||||||||||| ||||
Sbjct: 950 gcatcaatagaagtaccagagatatgaggggtcatggcgt 911



to top

>emb|X81129.1|CMNADDFD C.methylica gene for NAD-dependent formate dehydrogenase
          Length = 1256

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 311  ccatgggtgatccttgggtgcgggttgggggaacca 346
            ||||||||||||||| || || ||||| ||||||||
Sbjct: 1010 ccatgggtgatcctttggagctggttgtgggaacca 975



to top

>emb|AJ245934.1|CBO245934 Candida boidinii fdh3 gene for NAD-dependent formate dehydrogenase
          Length = 1095

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 311 ccatgggtgatccttgggtgcgggttgggggaacca 346
           ||||||||||||||| || || ||||| ||||||||
Sbjct: 885 ccatgggtgatcctttggagctggttgtgggaacca 850



to top

>emb|BX927231.12| Zebrafish DNA sequence from clone DKEYP-26F11 in linkage group 19,
             complete sequence
          Length = 104269

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ctggctggcgagctcgcctt 165
             ||||||||||||||||||||
Sbjct: 98664 ctggctggcgagctcgcctt 98683



to top

>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence
          Length = 207128

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ttactacttgtactggctgg 153
             ||||||||||||||||||||
Sbjct: 42433 ttactacttgtactggctgg 42452



to top

>gb|AF004096.1|AF004096 Candida boidinii NAD-dependent formate dehydrogenase (FDH1) gene,
            complete cds
          Length = 1562

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 311  ccatgggtgatccttgggtgcgggttgggggaacca 346
            ||||||||||||||| || || ||||| ||||||||
Sbjct: 1074 ccatgggtgatcctttggagctggttgtgggaacca 1039



to top

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 255     gcatcaattgtagtcccagagatgtgaggggtcattgcgt 294
               |||||||| | ||| |||||||| ||||||||||| ||||
Sbjct: 3692948 gcatcaatagaagtaccagagatatgaggggtcatggcgt 3692987



to top

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 255     gcatcaattgtagtcccagagatgtgaggggtcattgcgt 294
               |||||||| | ||| |||||||| ||||||||||| ||||
Sbjct: 2623853 gcatcaatagaagtaccagagatatgaggggtcatggcgt 2623892


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,823,777
Number of Sequences: 3902068
Number of extensions: 2823777
Number of successful extensions: 38443
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 38305
Number of HSP's gapped (non-prelim): 116
length of query: 349
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 327
effective length of database: 17,147,199,772
effective search space: 5607134325444
effective search space used: 5607134325444
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top