| Clone Name | rbags3a07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D88272.1| Hordeum vulgare mRNA for formate dehydrogenase, complete cds Length = 1380 Score = 674 bits (340), Expect = 0.0 Identities = 346/348 (99%) Strand = Plus / Minus Query: 2 tggttgcacccccaggcagacatccattatttccgttctcagagaacgctcatacaacaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1339 tggttgcacccccaggcagacatccattatttccgttctcagagaacgctcatacaacaa 1280 Query: 62 cacaatggtttcttctctcacgcctcgcttcagagttcaaatatgttaccatgcagcgtc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1279 cacaatggtttcttctctcacgcctcgcttcatagttcaaatatgttaccatgcagcgtc 1220 Query: 122 ggaggggttgggttactacttgtactggctggcgagctcgccttccttgacgatgtagtt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1219 ggaggggttgggttactacttgtactggctggcgagctcgccttccttgacgatgtagtt 1160 Query: 182 ctccacggggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1159 ctccacggggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgc 1100 Query: 242 gtacctcagctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattagg 301 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1099 gtacctcagctgtgcatcaattgtagtcccagaaatgtgaggggtcattgcgtgattagg 1040 Query: 302 catgtagcgccatgggtgatccttgggtgcgggttgggggaaccagac 349 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1039 catgtagcgccatgggtgatccttgggtgcgggttgggggaaccagac 992
>dbj|AK104788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E04, full insert sequence Length = 1637 Score = 260 bits (131), Expect = 3e-66 Identities = 197/219 (89%) Strand = Plus / Minus Query: 131 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 1222 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 1163 Query: 191 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 1162 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 1103 Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 1102 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 1043 Query: 311 ccatgggtgatccttgggtgcgggttgggggaaccagac 349 ||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1042 ccatgggtgatcctttggtgctggttgggggaaccagac 1004
>dbj|AK065872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048A01, full insert sequence Length = 1648 Score = 260 bits (131), Expect = 3e-66 Identities = 197/219 (89%) Strand = Plus / Minus Query: 131 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 1233 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 1174 Query: 191 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 1173 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 1114 Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 1113 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 1054 Query: 311 ccatgggtgatccttgggtgcgggttgggggaaccagac 349 ||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1053 ccatgggtgatcctttggtgctggttgggggaaccagac 1015
>gb|BT016309.1| Zea mays clone Contig142 mRNA sequence Length = 1507 Score = 222 bits (112), Expect = 6e-55 Identities = 181/204 (88%) Strand = Plus / Minus Query: 143 gtactggctggcgagctcgccttccttgacgatgtagttctccacggggaactcctcgcc 202 |||||| ||||| |||| ||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 1223 gtactgactggcaagctggccttccttgacgatgtagttctgcacggggaagtcctcgcc 1164 Query: 203 cttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatcaat 262 |||||| ||||||| || ||||||| |||| ||| |||| |||| |||||| |||||||| Sbjct: 1163 cttgaaatacctattcagcatgtccctcacaccatccgcataccgcagctgcgcatcaat 1104 Query: 263 tgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcgccatgggtgatc 322 ||||||||||||||||||||||||||| || || || |||||||||||||| |||||||| Sbjct: 1103 tgtagtcccagagatgtgaggggtcatggcatggtttggcatgtagcgccaggggtgatc 1044 Query: 323 cttgggtgcgggttgggggaacca 346 ||| ||||| || || |||||||| Sbjct: 1043 ctttggtgctggctgtgggaacca 1020
>dbj|AB019533.1| Oryza sativa mRNA for Nad-dependent formate dehydrogenase, complete cds Length = 1449 Score = 220 bits (111), Expect = 2e-54 Identities = 192/219 (87%) Strand = Plus / Minus Query: 131 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 1236 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 1177 Query: 191 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250 ||| || || || ||||||||||| |||| ||||||||| ||||| || ||||| ||||| Sbjct: 1176 gaagtcttcccctttgaagtacctgtccagcatgtccttaactcctgctgcgtatctcag 1117 Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 1116 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtaccg 1057 Query: 311 ccatgggtgatccttgggtgcgggttgggggaaccagac 349 ||| || || |||| ||||| ||||||||||||||||| Sbjct: 1056 ccagggtggaccctttggtgctggttgggggaaccagac 1018
>dbj|AK064610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B06, full insert sequence Length = 1872 Score = 218 bits (110), Expect = 9e-54 Identities = 182/206 (88%) Strand = Plus / Minus Query: 144 tactggctggcgagctcgccttccttgacgatgtagttctccacggggaactcctcgccc 203 |||||||||||||||| |||| |||||||||||||||||| | | ||||| ||||| || Sbjct: 1678 tactggctggcgagctggcctgccttgacgatgtagttctgcgccgggaagtcctcccct 1619 Query: 204 ttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatcaatt 263 ||||| ||||| |||| ||||||||| || || |||||||| ||||||||| |||||||| Sbjct: 1618 ttgaaatacctgtccagcatgtcctttacccccgccgcgtatctcagctgtccatcaatt 1559 Query: 264 gtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcgccatgggtgatcc 323 |||||||||||| |||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 1558 gtagtcccagagcagtgaggggtcatagcgtgattgggcatgtatcgccatgggtgatcc 1499 Query: 324 ttgggtgcgggttgggggaaccagac 349 || ||||| || |||||||||||||| Sbjct: 1498 tttggtgctggctgggggaaccagac 1473
>gb|AY111955.1| Zea mays CL15209_1 mRNA sequence Length = 1667 Score = 218 bits (110), Expect = 9e-54 Identities = 167/186 (89%) Strand = Plus / Minus Query: 161 gccttccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaa 220 ||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||| Sbjct: 1210 gccttccttgacgatgtagttctgcaccgggaagtcctcgcccttgaaatacctatccag 1151 Query: 221 catgtccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtg 280 ||||||| |||| ||| |||| |||| |||||| |||||||||||||||||||||||||| Sbjct: 1150 catgtccctcacaccatccgcataccgcagctgcgcatcaattgtagtcccagagatgtg 1091 Query: 281 aggggtcattgcgtgattaggcatgtagcgccatgggtgatccttgggtgcgggttgggg 340 ||||||||| || || ||||||||||||||||| ||||||||||| ||||| || || || Sbjct: 1090 aggggtcatggcatggttaggcatgtagcgccaggggtgatcctttggtgctggctgtgg 1031 Query: 341 gaacca 346 |||||| Sbjct: 1030 gaacca 1025
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 149 bits (75), Expect = 7e-33 Identities = 93/99 (93%) Strand = Plus / Minus Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 16434100 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 16434041 Query: 311 ccatgggtgatccttgggtgcgggttgggggaaccagac 349 ||||||||||||||| ||||| ||||||||||||||||| Sbjct: 16434040 ccatgggtgatcctttggtgctggttgggggaaccagac 16434002 Score = 117 bits (59), Expect = 2e-23 Identities = 89/99 (89%) Strand = Plus / Minus Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 |||| |||||||||||||||||||| |||||||||||| || ||||| |||||||| || Sbjct: 16463964 ctgtccatcaattgtagtcccagagcagtgaggggtcatagcatgattgggcatgtatcg 16463905 Query: 311 ccatgggtgatccttgggtgcgggttgggggaaccagac 349 ||||||||||||||| ||||| || |||||||||||||| Sbjct: 16463904 ccatgggtgatcctttggtgctggctgggggaaccagac 16463866 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 131 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 16434684 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 16434625 Query: 191 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 16434624 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 16434565 Query: 251 ctg 253 ||| Sbjct: 16434564 ctg 16434562 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 131 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190 |||||| |||| |||||||||||||||| |||| |||||||||||||||||| | | || Sbjct: 16464698 gggttattactgatactggctggcgagctggcctgccttgacgatgtagttctgcgccgg 16464639 Query: 191 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250 ||| ||||| || ||||| ||||| |||| ||||||||| || || |||||||| ||||| Sbjct: 16464638 gaagtcctcccctttgaaatacctgtccagcatgtcctttacccccgccgcgtatctcag 16464579 Query: 251 ct 252 || Sbjct: 16464578 ct 16464577
>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0404G03 Length = 135225 Score = 149 bits (75), Expect = 7e-33 Identities = 93/99 (93%) Strand = Plus / Minus Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 43418 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 43359 Query: 311 ccatgggtgatccttgggtgcgggttgggggaaccagac 349 ||||||||||||||| ||||| ||||||||||||||||| Sbjct: 43358 ccatgggtgatcctttggtgctggttgggggaaccagac 43320 Score = 117 bits (59), Expect = 2e-23 Identities = 89/99 (89%) Strand = Plus / Minus Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 |||| |||||||||||||||||||| |||||||||||| || ||||| |||||||| || Sbjct: 73282 ctgtccatcaattgtagtcccagagcagtgaggggtcatagcatgattgggcatgtatcg 73223 Query: 311 ccatgggtgatccttgggtgcgggttgggggaaccagac 349 ||||||||||||||| ||||| || |||||||||||||| Sbjct: 73222 ccatgggtgatcctttggtgctggctgggggaaccagac 73184 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 131 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 44002 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 43943 Query: 191 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 43942 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 43883 Query: 251 ctg 253 ||| Sbjct: 43882 ctg 43880 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 131 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190 |||||| |||| |||||||||||||||| |||| |||||||||||||||||| | | || Sbjct: 74016 gggttattactgatactggctggcgagctggcctgccttgacgatgtagttctgcgccgg 73957 Query: 191 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250 ||| ||||| || ||||| ||||| |||| ||||||||| || || |||||||| ||||| Sbjct: 73956 gaagtcctcccctttgaaatacctgtccagcatgtcctttacccccgccgcgtatctcag 73897 Query: 251 ct 252 || Sbjct: 73896 ct 73895
>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0008F02 Length = 139655 Score = 149 bits (75), Expect = 7e-33 Identities = 93/99 (93%) Strand = Plus / Minus Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 110663 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 110604 Query: 311 ccatgggtgatccttgggtgcgggttgggggaaccagac 349 ||||||||||||||| ||||| ||||||||||||||||| Sbjct: 110603 ccatgggtgatcctttggtgctggttgggggaaccagac 110565 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 131 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 190 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 111247 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 111188 Query: 191 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 250 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 111187 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 111128 Query: 251 ctg 253 ||| Sbjct: 111127 ctg 111125
>emb|Z21493.2|MISTFDHD Solanum tuberosum mRNA for formate dehydrogenase Length = 1262 Score = 123 bits (62), Expect = 4e-25 Identities = 134/158 (84%) Strand = Plus / Minus Query: 189 gggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctc 248 ||||| ||||| |||||||||||||| |||||||| ||||| |||||| || |||||| Sbjct: 1099 gggaaatcctcacccttgaagtacctgtccaacatatcctttgttccagctgcatacctc 1040 Query: 249 agctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtag 308 | |||||||||||| ||||||||||| |||||||| ||||| || || || ||||||||| Sbjct: 1039 aactgtgcatcaatggtagtcccagaaatgtgaggagtcatagcttggtttggcatgtag 980 Query: 309 cgccatgggtgatccttgggtgcgggttgggggaacca 346 ||||| || || |||||||| || ||||| ||| |||| Sbjct: 979 cgccacggatggtccttgggagctggttgtgggtacca 942
>emb|AJ849378.1| Lycopersicon esculentum mRNA for formate dehydrogenase (fdh gene) Length = 1572 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 189 gggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctc 248 ||||| ||||| |||||||||||||| |||||||| ||||| |||||| || |||||| Sbjct: 1243 gggaaatcctcacccttgaagtacctgtccaacatatcctttgttccagctgcatacctc 1184 Query: 249 agctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtag 308 | |||||||||||| ||||||||||| |||||||| ||||| || || || |||||||| Sbjct: 1183 aactgtgcatcaatggtagtcccagaaatgtgaggagtcatagcttggtttggcatgtaa 1124 Query: 309 cgccatgggtgatccttgggtgcgggttgggggaacca 346 |||||| | || |||||||| || ||||| ||| |||| Sbjct: 1123 cgccatagatggtccttgggagctggttgtgggtacca 1086
>emb|Z99992.1|STZ99992 Solanum tuberosum fdh1 gene encoding formate dehydrogenase Length = 4392 Score = 87.7 bits (44), Expect = 2e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 |||||||||||| ||||||||||| |||||||| ||||| || || || ||||||||||| Sbjct: 4063 ctgtgcatcaatggtagtcccagaaatgtgaggagtcatagcttggtttggcatgtagcg 4004 Query: 311 ccatgggtgatccttgggtgcgggttgggggaacca 346 |||||| || |||||||| || ||||| ||| |||| Sbjct: 4003 ccatggatggtccttgggagctggttgtgggtacca 3968 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 189 gggaactcctcgcccttgaagtacctatccaacatgtcctt 229 ||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 4237 gggaaatcctcacccttgaagtacctgtccaacatatcctt 4197
>emb|AJ577266.2|QRO577266 Quercus robur mRNA for formate dehydrogenase (ORF1) Length = 1513 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 |||||||||||| || || ||||| || ||||||||||| || || |||||||| || || Sbjct: 1121 ctgtgcatcaatggtggtaccagaaatatgaggggtcatagcatggttaggcatataacg 1062 Query: 311 ccatgggtgatccttgggtgcgggttgggggaacca 346 ||||||||| ||||| || || ||||| |||||||| Sbjct: 1061 ccatgggtggtcctttggagcaggttgtgggaacca 1026
>ref|NM_121482.2| Arabidopsis thaliana FDH (FORMATE DEHYDROGENASE); oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor AT5G14780 (FDH) mRNA, complete cds Length = 1518 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1186 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1127 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1126 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1067 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 1066 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1026
>gb|AY081734.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1155 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1127 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1068 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1067 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1008 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 1007 gtcatagcctggttaggcatgtaacgccatggatggtcctt 967
>gb|AF208029.1|AF208029 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1B (FDH1B) mRNA, complete cds Length = 1508 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1176 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1117 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1116 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1057 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 1056 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1016
>gb|AF208028.1|AF208028 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1A (FDH1A) mRNA, complete cds Length = 1439 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1184 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1125 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1124 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1065 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 1064 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1024
>gb|AY054285.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1494 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1182 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1123 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1122 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1063 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 1062 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1022
>dbj|AK221844.1| Arabidopsis thaliana mRNA for formate dehydrogenase, complete cds, clone: RAFL22-04-J07 Length = 739 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 473 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 414 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 413 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 354 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 353 gtcatagcctggttaggcatgtaacgccatggatggtcctt 313
>gb|AY039609.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1443 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1186 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1127 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1126 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1067 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 1066 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1026
>dbj|AB023897.1| Arabidopsis thaliana fdh mRNA for formate dehydrogenase, complete cds Length = 1381 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1127 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1068 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1067 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1008 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 1007 gtcatagcctggttaggcatgtaacgccatggatggtcctt 967
>gb|AF217195.1|AF217195 Arabidopsis thaliana formate dehydrogenase (FDH) mRNA, complete cds Length = 1490 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1186 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1127 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1126 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1067 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 1066 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1026
>gb|AY089191.1| Arabidopsis thaliana clone 7530 mRNA, complete sequence Length = 1514 Score = 65.9 bits (33), Expect = 8e-08 Identities = 129/161 (80%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1184 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1125 Query: 225 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 284 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1124 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1065 Query: 285 gtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||| || || ||||||||||| |||||||| || ||||| Sbjct: 1064 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1024
>gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map MAP_LOC, complete sequence Length = 73587 Score = 63.9 bits (32), Expect = 3e-07 Identities = 81/96 (84%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 |||||||||||| ||||||||||| |||||||| ||||| || || || ||||||||||| Sbjct: 61627 ctgtgcatcaatggtagtcccaga-atgtgaggagtcatagcttggtttggcatgtagcg 61685 Query: 311 ccatgggtgatccttgggtgcgggttgggggaacca 346 ||| | || |||||||| || ||||| ||| |||| Sbjct: 61686 ccacagatggtccttgggagctggttgtgggtacca 61721 Score = 46.1 bits (23), Expect = 0.075 Identities = 32/35 (91%) Strand = Plus / Plus Query: 189 gggaactcctcgcccttgaagtacctatccaacat 223 ||||| ||||| |||||||||||||| |||||||| Sbjct: 61453 gggaaatcctcacccttgaagtacctgtccaacat 61487
>emb|AJ004829.1|STAJ4829 Solanum tuberosum fdh3 pseudogene Length = 5868 Score = 63.9 bits (32), Expect = 3e-07 Identities = 81/96 (84%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 251 ctgtgcatcaattgtagtcccagagatgtgaggggtcattgcgtgattaggcatgtagcg 310 |||||||||||| ||||||||||| |||||||| ||||| || || || ||||||||||| Sbjct: 4724 ctgtgcatcaatggtagtcccaga-atgtgaggagtcatagcttggtttggcatgtagcg 4666 Query: 311 ccatgggtgatccttgggtgcgggttgggggaacca 346 ||| | || |||||||| || ||||| ||| |||| Sbjct: 4665 ccacagatggtccttgggagctggttgtgggtacca 4630 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 189 gggaactcctcgcccttgaagtacctatccaacatgtcctt 229 ||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 4898 gggaaatcctcacccttgaagtacctgtccaacatatcctt 4858
>emb|AJ300721.1|PPI300721 Pinus pinaster partial mRNA for putative NAD-dependent formate dehydrogenase Length = 989 Score = 54.0 bits (27), Expect = 3e-04 Identities = 100/123 (81%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 201 cccttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatca 260 ||||||||||| || || | ||| |||||| |||||| || ||||| | ||| ||||| Sbjct: 676 cccttgaagtatctgtctagcatatccttcgttccagctgcataccttatctgggcatct 617 Query: 261 attgtagt-cccagagatgtgaggggtcattgcgtgattaggcatgtagcgccatgggtg 319 |||||||| ||||||||| || || ||||| || || || |||||| |||||||||| || Sbjct: 616 attgtagtccccagagatatggggagtcatggcatggtttggcatggagcgccatggatg 557 Query: 320 atc 322 ||| Sbjct: 556 atc 554
>ref|XM_659037.1| Aspergillus nidulans FGSC A4 formate dehydrogenase (AN6525.2), mRNA Length = 1134 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Minus Query: 314 tgggtgatccttgggtgcgggttgggggaaccagac 349 |||||| |||||||| ||||| |||||||||||||| Sbjct: 921 tgggtgctccttgggagcgggctgggggaaccagac 886
>emb|Z11612.1|ANACIAG A.nidulans aciA gene for AciA protein Length = 3042 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Minus Query: 314 tgggtgatccttgggtgcgggttgggggaaccagac 349 |||||| |||||||| ||||| |||||||||||||| Sbjct: 2282 tgggtgctccttgggagcgggctgggggaaccagac 2247
>dbj|AK109022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B02, full insert sequence Length = 1344 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Minus Query: 314 tgggtgatccttgggtgcgggttgggggaaccagac 349 |||||| |||||||| ||||| |||||||||||||| Sbjct: 1033 tgggtggtccttgggcgcgggctgggggaaccagac 998
>emb|AL391149.1|ATT9L3 Arabidopsis thaliana DNA chromosome 5, BAC clone T9L3 (ESSA project) Length = 89370 Score = 46.1 bits (23), Expect = 0.075 Identities = 41/47 (87%) Strand = Plus / Minus Query: 279 tgaggggtcattgcgtgattaggcatgtagcgccatgggtgatcctt 325 ||||||||||| || || ||||||||||| |||||||| || ||||| Sbjct: 46019 tgaggggtcatagcctggttaggcatgtaacgccatggatggtcctt 45973 Score = 44.1 bits (22), Expect = 0.30 Identities = 52/62 (83%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 46281 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 46222 Query: 225 tc 226 || Sbjct: 46221 tc 46220
>gb|AF439732.1|AF439732 Zea mays formate dehydrogenase mRNA, partial cds Length = 597 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 321 tccttgggtgcgggttgggggaacca 346 ||||||||||| |||||||||||||| Sbjct: 596 tccttgggtgctggttgggggaacca 571
>emb|BX833670.1|CNS0A1M3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL6ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1428 Score = 44.1 bits (22), Expect = 0.30 Identities = 52/62 (83%) Strand = Plus / Minus Query: 165 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 224 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1170 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1111 Query: 225 tc 226 || Sbjct: 1110 tc 1109
>ref|XM_361560.1| Magnaporthe grisea 70-15 hypothetical protein (MG04034.4) partial mRNA Length = 1092 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 tccttgggtgcgggttgggggaaccagac 349 |||||||| ||||| |||||||||||||| Sbjct: 863 tccttgggggcgggctgggggaaccagac 835
>gb|AY850352.1| Magnaporthe grisea formate dehydrogenase-like protein mRNA, complete cds Length = 1514 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 tccttgggtgcgggttgggggaaccagac 349 |||||||| ||||| |||||||||||||| Sbjct: 1244 tccttgggggcgggctgggggaaccagac 1216
>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence Length = 168940 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ttactacttgtactggctgg 153 |||||||||||||||||||| Sbjct: 109499 ttactacttgtactggctgg 109518
>ref|XM_501117.1| Yarrowia lipolytica CLIB122, YALI0B19976g predicted mRNA Length = 1116 Score = 40.1 bits (20), Expect = 4.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 255 gcatcaattgtagtcccagagatgtgaggggtcattgcgt 294 |||||||| | ||| |||||||| ||||||||||| |||| Sbjct: 950 gcatcaatagaagtaccagagatatgaggggtcatggcgt 911
>emb|X81129.1|CMNADDFD C.methylica gene for NAD-dependent formate dehydrogenase Length = 1256 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 311 ccatgggtgatccttgggtgcgggttgggggaacca 346 ||||||||||||||| || || ||||| |||||||| Sbjct: 1010 ccatgggtgatcctttggagctggttgtgggaacca 975
>emb|AJ245934.1|CBO245934 Candida boidinii fdh3 gene for NAD-dependent formate dehydrogenase Length = 1095 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 311 ccatgggtgatccttgggtgcgggttgggggaacca 346 ||||||||||||||| || || ||||| |||||||| Sbjct: 885 ccatgggtgatcctttggagctggttgtgggaacca 850
>emb|BX927231.12| Zebrafish DNA sequence from clone DKEYP-26F11 in linkage group 19, complete sequence Length = 104269 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ctggctggcgagctcgcctt 165 |||||||||||||||||||| Sbjct: 98664 ctggctggcgagctcgcctt 98683
>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence Length = 207128 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ttactacttgtactggctgg 153 |||||||||||||||||||| Sbjct: 42433 ttactacttgtactggctgg 42452
>gb|AF004096.1|AF004096 Candida boidinii NAD-dependent formate dehydrogenase (FDH1) gene, complete cds Length = 1562 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 311 ccatgggtgatccttgggtgcgggttgggggaacca 346 ||||||||||||||| || || ||||| |||||||| Sbjct: 1074 ccatgggtgatcctttggagctggttgtgggaacca 1039
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 4.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 255 gcatcaattgtagtcccagagatgtgaggggtcattgcgt 294 |||||||| | ||| |||||||| ||||||||||| |||| Sbjct: 3692948 gcatcaatagaagtaccagagatatgaggggtcatggcgt 3692987
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 4.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 255 gcatcaattgtagtcccagagatgtgaggggtcattgcgt 294 |||||||| | ||| |||||||| ||||||||||| |||| Sbjct: 2623853 gcatcaatagaagtaccagagatatgaggggtcatggcgt 2623892 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,823,777 Number of Sequences: 3902068 Number of extensions: 2823777 Number of successful extensions: 38443 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 38305 Number of HSP's gapped (non-prelim): 116 length of query: 349 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 327 effective length of database: 17,147,199,772 effective search space: 5607134325444 effective search space used: 5607134325444 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)