ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags1p16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G14, full insert sequence Length = 2680 Score = 682 bits (344), Expect = 0.0 Identities = 604/691 (87%), Gaps = 6/691 (0%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 436 tcagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcc 495 |||||||| ||||| ||||||||||| |||||||||||| |||| || | |||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggcc 2135 Query: 496 aaaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaaga 555 | ||| ||||||| ||||||||||||||||||||| |||| || | ||||||| ||| Sbjct: 2134 acaggtgacttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcaga 2075 Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 || |||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| Sbjct: 2074 ggaatgtagataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatct 2015 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||||||| ||||||||||| ||||| ||||||||||| || |||||||| ||||||||| Sbjct: 2014 ggcctgttagtagcaccaataatgaacacggttttcttcgcgttcatgccgtccatctca 1955 Query: 676 gtcagcagctggttcagcactctatcagcagcacctccagcatccccactgctgcttcct 735 |||| || |||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct: 1954 gtcaacaactggttcagcactctatcagcagcacctccggcatcaccaacactgcttcct 1895 Query: 736 ctctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||||| |||||||| ||||||| Sbjct: 1894 ctctgggtagcaattgagtcaagctcatcaa 1864
>dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O07, full insert sequence Length = 2685 Score = 682 bits (344), Expect = 0.0 Identities = 604/691 (87%), Gaps = 6/691 (0%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 436 tcagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcc 495 |||||||| ||||| ||||||||||| |||||||||||| |||| || | |||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggcc 2135 Query: 496 aaaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaaga 555 | ||| ||||||| ||||||||||||||||||||| |||| || | ||||||| ||| Sbjct: 2134 acaggtgacttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcaga 2075 Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 || |||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| Sbjct: 2074 ggaatgtagataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatct 2015 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||||||| ||||||||||| ||||| ||||||||||| || |||||||| ||||||||| Sbjct: 2014 ggcctgttagtagcaccaataatgaacacggttttcttcgcgttcatgccgtccatctca 1955 Query: 676 gtcagcagctggttcagcactctatcagcagcacctccagcatccccactgctgcttcct 735 |||| || |||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct: 1954 gtcaacaactggttcagcactctatcagcagcacctccggcatcaccaacactgcttcct 1895 Query: 736 ctctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||||| |||||||| ||||||| Sbjct: 1894 ctctgggtagcaattgagtcaagctcatcaa 1864
>dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N05, full insert sequence Length = 2701 Score = 682 bits (344), Expect = 0.0 Identities = 604/691 (87%), Gaps = 6/691 (0%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 436 tcagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcc 495 |||||||| ||||| ||||||||||| |||||||||||| |||| || | |||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggcc 2135 Query: 496 aaaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaaga 555 | ||| ||||||| ||||||||||||||||||||| |||| || | ||||||| ||| Sbjct: 2134 acaggtgacttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcaga 2075 Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 || |||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| Sbjct: 2074 ggaatgtagataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatct 2015 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||||||| ||||||||||| ||||| ||||||||||| || |||||||| ||||||||| Sbjct: 2014 ggcctgttagtagcaccaataatgaacacggttttcttcgcgttcatgccgtccatctca 1955 Query: 676 gtcagcagctggttcagcactctatcagcagcacctccagcatccccactgctgcttcct 735 |||| || |||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct: 1954 gtcaacaactggttcagcactctatcagcagcacctccggcatcaccaacactgcttcct 1895 Query: 736 ctctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||||| |||||||| ||||||| Sbjct: 1894 ctctgggtagcaattgagtcaagctcatcaa 1864
>dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D04, full insert sequence Length = 2685 Score = 682 bits (344), Expect = 0.0 Identities = 604/691 (87%), Gaps = 6/691 (0%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 436 tcagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcc 495 |||||||| ||||| ||||||||||| |||||||||||| |||| || | |||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggcc 2135 Query: 496 aaaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaaga 555 | ||| ||||||| ||||||||||||||||||||| |||| || | ||||||| ||| Sbjct: 2134 acaggtgacttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcaga 2075 Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 || |||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| Sbjct: 2074 ggaatgtagataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatct 2015 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||||||| ||||||||||| ||||| ||||||||||| || |||||||| ||||||||| Sbjct: 2014 ggcctgttagtagcaccaataatgaacacggttttcttcgcgttcatgccgtccatctca 1955 Query: 676 gtcagcagctggttcagcactctatcagcagcacctccagcatccccactgctgcttcct 735 |||| || |||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct: 1954 gtcaacaactggttcagcactctatcagcagcacctccggcatcaccaacactgcttcct 1895 Query: 736 ctctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||||| |||||||| ||||||| Sbjct: 1894 ctctgggtagcaattgagtcaagctcatcaa 1864
>dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A05, full insert sequence Length = 2685 Score = 682 bits (344), Expect = 0.0 Identities = 604/691 (87%), Gaps = 6/691 (0%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 436 tcagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcc 495 |||||||| ||||| ||||||||||| |||||||||||| |||| || | |||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggcc 2135 Query: 496 aaaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaaga 555 | ||| ||||||| ||||||||||||||||||||| |||| || | ||||||| ||| Sbjct: 2134 acaggtgacttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcaga 2075 Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 || |||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| Sbjct: 2074 ggaatgtagataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatct 2015 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||||||| ||||||||||| ||||| ||||||||||| || |||||||| ||||||||| Sbjct: 2014 ggcctgttagtagcaccaataatgaacacggttttcttcgcgttcatgccgtccatctca 1955 Query: 676 gtcagcagctggttcagcactctatcagcagcacctccagcatccccactgctgcttcct 735 |||| || |||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct: 1954 gtcaacaactggttcagcactctatcagcagcacctccggcatcaccaacactgcttcct 1895 Query: 736 ctctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||||| |||||||| ||||||| Sbjct: 1894 ctctgggtagcaattgagtcaagctcatcaa 1864
>dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full insert sequence Length = 2914 Score = 674 bits (340), Expect = 0.0 Identities = 603/691 (87%), Gaps = 6/691 (0%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||| ||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagtgaacctaaactcggtgccgaaccca 2435 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 436 tcagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcc 495 |||||||| ||||| ||||||||||| |||||||||||| |||| || | |||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggcc 2135 Query: 496 aaaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaaga 555 | ||| ||||||| ||||||||||||||||||||| |||| || | ||||||| ||| Sbjct: 2134 acaggtgacttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcaga 2075 Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 || |||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| Sbjct: 2074 ggaatgtagataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatct 2015 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||||||| ||||||||||| ||||| ||||||||||| || |||||||| ||||||||| Sbjct: 2014 ggcctgttagtagcaccaataatgaacacggttttcttcgcgttcatgccgtccatctca 1955 Query: 676 gtcagcagctggttcagcactctatcagcagcacctccagcatccccactgctgcttcct 735 |||| || |||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct: 1954 gtcaacaactggttcagcactctatcagcagcacctccggcatcaccaacactgcttcct 1895 Query: 736 ctctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||||| |||||||| ||||||| Sbjct: 1894 ctctgggtagcaattgagtcaagctcatcaa 1864
>dbj|AK059991.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B06, full insert sequence Length = 1232 Score = 674 bits (340), Expect = 0.0 Identities = 603/691 (87%), Gaps = 6/691 (0%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 1100 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 1047 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 1046 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 987 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 986 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 927 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 926 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 867 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 866 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 807 Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 806 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 747 Query: 436 tcagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcc 495 |||||||| ||||| ||||||||||| |||||||||||| |||| || | |||||||||| Sbjct: 746 tcagcaccactgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggcc 687 Query: 496 aaaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaaga 555 | ||| ||||||| ||||||||||||||||||||| |||| || | ||||||| ||| Sbjct: 686 acaggtgacttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcaga 627 Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 || |||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| Sbjct: 626 ggaatgtagataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatct 567 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||||||| ||||||||||| ||||| | ||||||||| || |||||||| ||||||||| Sbjct: 566 ggcctgttagtagcaccaataatgaacatggttttcttcgcgttcatgccgtccatctca 507 Query: 676 gtcagcagctggttcagcactctatcagcagcacctccagcatccccactgctgcttcct 735 |||| || |||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct: 506 gtcaacaactggttcagcactctatcagcagcacctccggcatcaccaacactgcttcct 447 Query: 736 ctctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||||| |||||||| ||||||| Sbjct: 446 ctctgggtagcaattgagtcaagctcatcaa 416
>gb|AY108324.1| Zea mays PCO097023 mRNA sequence Length = 1794 Score = 500 bits (252), Expect = e-138 Identities = 510/596 (85%) Strand = Plus / Minus Query: 171 gaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggta 230 ||||||||||||||| || || || || |||||||| || |||||||| ||||||||||| Sbjct: 1448 gaaccggaactcgctgccaaacccgcgggactgctggagtgtctgggcgaaggcctggta 1389 Query: 231 cttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagtg 290 |||||||||||||||||||||||| || ||||| || |||||||| |||||||||||||| Sbjct: 1388 cttgcggatgtcggcgtcactcacgctgcgacgggcgtacttcatggactcctcgaagtg 1329 Query: 291 ggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgtc 350 |||||| ||||||| || | || || |||||||| |||||||| || || |||||||| Sbjct: 1328 agcagccttgatctcagcgatgtcgtctacctcgtcttcctccatagcctcggggttgtc 1269 Query: 351 cttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgca 410 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1268 tttcctgcgcctctccctctcgatatccttctcgatgttctccctgatggcatacttgca 1209 Query: 411 agcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaag 470 || |||||||| || || |||||||| ||||||||||| || |||||||| ||||| || Sbjct: 1208 cgcgcgctggcagatctctgtgatatctgcaccgctgaaaccctgggtgtatttggcgag 1149 Query: 471 agcactcagatcaatatccttggccaaaggagacttcctgaggcaagctttgaagatctg 530 |||| ||| |||| ||||||||||| ||||||||||||||| || |||||||||||||| Sbjct: 1148 agcattcaagtcaacatccttggccacaggagacttcctgagacaggctttgaagatctg 1089 Query: 531 gtgcctcgaatcgacatcaggaagagggatgtagataagctgatcaagacgccctggcct 590 |||| || | |||| || ||||| || ||||||||||||||||||||||| ||||| Sbjct: 1088 aagcctggactgctcatcgggcagaggaatatagataagctgatcaagacgcccaggcct 1029 Query: 591 aagcagggcagggtctatgatgtctggcctgttggtagcaccaatgatgaagacggtttt 650 |||| ||| ||||| |||||||| || ||||| || ||||| || || || || || || Sbjct: 1028 cagcaaggctgggtcaatgatgtccggtctgttagttgcaccgataataaaaaccgtctt 969 Query: 651 cttagcattcatgccatccatctcagtcagcagctggttcagcactctatcagcagcacc 710 ||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| Sbjct: 968 cttggcattcatgccatccatctcagtaagcagctggttcaacaccctatcagcagcacc 909 Query: 711 tccagcatccccactgctgcttcctctctgggtagcaatcgagtcaagttcatcaa 766 || || || ||| |||||||||||||| |||||||| ||||| || ||||||| Sbjct: 908 accggcgtcaccaacactgcttcctctctgagtagcaatggagtcgagctcatcaa 853 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 73 atttaactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggcc 132 |||||||| ||||| |||||||| || ||||||| ||||||||||| || || |||||| Sbjct: 1537 atttaactgtataagtcatcatcgtcagctgctgctgcagcggatgcgaagggatcggcc 1478 Query: 133 gcagcggcag 142 ||||| |||| Sbjct: 1477 gcagcagcag 1468
>ref|NM_196705.1| Oryza sativa (japonica cultivar-group) putative endoplasmic reticulum membrane fusion protein (OSJNBa0046P18.14), mRNA Length = 2454 Score = 496 bits (250), Expect = e-137 Identities = 507/590 (85%), Gaps = 2/590 (0%) Strand = Plus / Minus Query: 170 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 229 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 2368 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 2309 Query: 230 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 289 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 2308 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 2249 Query: 290 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 349 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 2248 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 2189 Query: 350 ccttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgc 409 |||| ||||||||||||||||| |||||||||||||||||||| || || ||||| |||| Sbjct: 2188 ccttactccgcctctccctctcaatgtccttctcgatgttctctctaatcgcatatttgc 2129 Query: 410 aagcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaa 469 | |||||||| || ||||| || ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 2128 atgcacgctgacagatttctgtaatatctgcaccactgaagccttgggtgtacttggcaa 2069 Query: 470 gagcactcagatcaatatccttggccaaaggagacttcctgaggcaagctttgaagatct 529 |||| ||| || | |||||| |||| ||| ||||||||||||||||||||||| || | Sbjct: 2068 gagcgttcaagtccacatccttcgccacaggggacttcctgaggcaagctttgaaaattt 2009 Query: 530 ggtgcctcgaatcgacatcaggaagagggatgtagataagctgatcaagacgccctggcc 589 || |||| || | ||||||| || || |||||||| |||||||| ||||||||||||| Sbjct: 2008 ggagcctagattgctcatcaggcagtggaatgtagatcagctgatcgagacgccctggcc 1949 Query: 590 taagcagggcagggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttt 649 |||||| ||| || ||||||||||| |||||||| ||||| ||||| ||||| || || | Sbjct: 1948 taagcaaggccggatctatgatgtcaggcctgtttgtagccccaataatgaaaacagtct 1889 Query: 650 tcttagcattcatgccatccatctcagtcagcagctggttcagcactctatcagcagcac 709 |||| |||||||||||||||||||| |||| |||||| |||||||| |||||||| |||| Sbjct: 1888 tcttggcattcatgccatccatctctgtcaacagctgattcagcaccctatcagctgcac 1829 Query: 710 ctccagcatc-cccactgctgcttcctctctgggtagcaatcgagtcaag 758 |||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 1828 ctccagcatcacccac-actgcttcctctctgagtagcaattgagtcaag 1780 Score = 44.1 bits (22), Expect = 0.67 Identities = 52/62 (83%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 2453 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 2394 Query: 136 gc 137 || Sbjct: 2393 gc 2392
>gb|AY105040.1| Zea mays PCO097024 mRNA sequence Length = 2126 Score = 454 bits (229), Expect = e-124 Identities = 504/593 (84%), Gaps = 2/593 (0%) Strand = Plus / Minus Query: 175 cggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggtacttg 234 ||||||||||| ||||| ||||| |||||||||| ||||||||| || |||||||||||| Sbjct: 1832 cggaactcgctgccgaacccacgggactgctgcaacgtctgggcgaacgcctggtacttg 1773 Query: 235 cggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagtgggca 294 ||||| || || ||||| ||||| || || ||||||||||| |||||||||||||| || Sbjct: 1772 cggatatcagcatcactgacactgcgccgagcatacttcatagactcctcgaagtgagct 1713 Query: 295 gccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgtccttc 354 || ||||||| |||| ||| || || || || ||||||||||| ||||||||||||||| Sbjct: 1712 gctttgatctcggcaatctcgtccacttcatcttcctccatcgcctcagggttgtccttc 1653 Query: 355 ctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgcaagca 414 ||||||| |||||||| || |||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 1652 atccgcctttccctctcaatatccttctcaatgttctctctgattgcatatttgcacgca 1593 Query: 415 cgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaagagca 474 |||||||||||||| |||||||| || || ||||||||||| |||||||| ||||||||| Sbjct: 1592 cgctggcaaatttctgtgatatctgctccactgaacccttgtgtgtacttagcaagagca 1533 Query: 475 ctcagatcaatatccttggccaaaggagacttcctgaggcaagctttgaagatctggtgc 534 |||| || | |||||| |||| ||| |||||||| ||||| || |||||||||||| || Sbjct: 1532 ttcaggtccacatcctttgccacaggggacttccttaggcaggccttgaagatctggagc 1473 Query: 535 ctcgaatcgacatcaggaagagggatgtagataagctgatcaagacgccctggcctaagc 594 || || | ||||||| || || |||||||| ||||| ||||||||||||||||| || Sbjct: 1472 ctagactgctcatcaggcagtggaatgtagatcagctggtcaagacgccctggcctcaga 1413 Query: 595 agggcagggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttttctta 654 || ||||| || |||||||| |||||||| ||||||||||| || || || |||||||| Sbjct: 1412 agagcaggatcaatgatgtcaggcctgtttgtagcaccaataataaacacagttttcttg 1353 Query: 655 gcattcatgccatccatctcagtcagcagctggttcagcactctatcagcagcacctcca 714 || |||||||||||||| || ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 1352 gcgttcatgccatccatttctgtcagtagctgattaagcactctatcagccgcacctcca 1293 Query: 715 gcatc-cccactgctgcttcctctctgggtagcaatcgagtcaagttcatcaa 766 ||||| ||||| || ||||||||||| || ||||| |||||||| ||||||| Sbjct: 1292 gcatcacccac-actacttcctctctgagtcgcaattgagtcaagctcatcaa 1241
>dbj|AK058908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E02, full insert sequence Length = 872 Score = 440 bits (222), Expect = e-120 Identities = 450/526 (85%) Strand = Plus / Minus Query: 170 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 229 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 526 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 467 Query: 230 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 289 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 466 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 407 Query: 290 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 349 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 406 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 347 Query: 350 ccttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgc 409 |||| ||||||||||||||||| |||||||||||||||||||| || || ||||| |||| Sbjct: 346 ccttactccgcctctccctctcaatgtccttctcgatgttctctctaatcgcatatttgc 287 Query: 410 aagcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaa 469 | |||||||| || ||||| || ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 286 atgcacgctgacagatttctgtaatatctgcaccactgaagccttgggtgtacttggcaa 227 Query: 470 gagcactcagatcaatatccttggccaaaggagacttcctgaggcaagctttgaagatct 529 |||| ||| || | |||||| |||| ||| ||||||||||||||||||||||| || | Sbjct: 226 gagcgttcaagtccacatccttcgccacaggggacttcctgaggcaagctttgaaaattt 167 Query: 530 ggtgcctcgaatcgacatcaggaagagggatgtagataagctgatcaagacgccctggcc 589 || |||| || | ||||||| || || |||||||| |||||||| ||||||||||||| Sbjct: 166 ggagcctagattgctcatcaggcagtggaatgtagatcagctgatcgagacgccctggcc 107 Query: 590 taagcagggcagggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttt 649 |||||| ||| || ||||||||||| |||||||| ||||| ||||| ||||| || || | Sbjct: 106 taagcaaggccggatctatgatgtcaggcctgtttgtagccccaataatgaaaacagtct 47 Query: 650 tcttagcattcatgccatccatctcagtcagcagctggttcagcac 695 |||| |||||||||||||||||||| |||| |||||| |||||||| Sbjct: 46 tcttggcattcatgccatccatctctgtcaacagctgattcagcac 1 Score = 44.1 bits (22), Expect = 0.67 Identities = 52/62 (83%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 611 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 552 Query: 136 gc 137 || Sbjct: 551 gc 550
>gb|AY107375.1| Zea mays PCO097021 mRNA sequence Length = 711 Score = 373 bits (188), Expect = e-100 Identities = 317/360 (88%) Strand = Plus / Minus Query: 171 gaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggta 230 ||||||||||||||| || || ||||| |||||||| || |||||||| ||||||||||| Sbjct: 374 gaaccggaactcgctgccaaacccacgggactgctggagtgtctgggcgaaggcctggta 315 Query: 231 cttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagtg 290 ||||||||||||||| ||||| ||||| || || || |||||||| |||||||||||||| Sbjct: 314 cttgcggatgtcggcatcactgacactgcggcgggcgtacttcatggactcctcgaagtg 255 Query: 291 ggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgtc 350 ||||||| ||||||| |||| || || |||||||| |||||||| || ||||||||||| Sbjct: 254 ggcagccatgatctcggcaatgtcgtccacctcgtcttcctccatggcctcagggttgtc 195 Query: 351 cttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgca 410 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 cttcctgcgcctctcccgctcgatgtccttctcgatgttctccctgatggcatacttgca 135 Query: 411 agcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaag 470 ||||||||||| || || |||||||| || || ||||| || ||||||||||||||||| Sbjct: 134 cgcacgctggcagatctcggtgatatctgctccactgaaaccctgggtgtacttggcaag 75 Query: 471 agcactcagatcaatatccttggccaaaggagacttcctgaggcaagctttgaagatctg 530 |||| || |||| ||||| |||| |||||||||||||||||| |||||||||||||| Sbjct: 74 agcatgcaagtcaacgtccttagccacaggagacttcctgaggcaggctttgaagatctg 15 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 112 gcggatgcaaaagggtcggccgcagcggcag 142 ||||||||||| |||||||||||| |||||| Sbjct: 424 gcggatgcaaaggggtcggccgcaccggcag 394
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 365 bits (184), Expect = 1e-97 Identities = 313/356 (87%) Strand = Plus / Plus Query: 385 atgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccg 444 |||||||| |||||||| || ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 2834734 atgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaatatcagcacca 2834793 Query: 445 ctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggccaaaggagac 504 ||||| ||||||||||| |||||||||||| |||| || | ||||||||||| ||| ||| Sbjct: 2834794 ctgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggccacaggtgac 2834853 Query: 505 ttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaagagggatgtag 564 |||| ||||||||||||||||||||| |||| || | ||||||| ||||| |||||| Sbjct: 2834854 ttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcagaggaatgtag 2834913 Query: 565 ataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtctggcctgttg 624 |||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||| Sbjct: 2834914 ataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatctggcctgtta 2834973 Query: 625 gtagcaccaatgatgaagacggttttcttagcattcatgccatccatctcagtcagcagc 684 ||||||||||| ||||| ||||||||||| || |||||||| ||||||||||||| || | Sbjct: 2834974 gtagcaccaataatgaacacggttttcttcgcgttcatgccgtccatctcagtcaacaac 2835033 Query: 685 tggttcagcactctatcagcagcacctccagcatccccactgctgcttcctctctg 740 ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 2835034 tggttcagcactctatcagcagcacctccggcatcaccaacactgcttcctctctg 2835089 Score = 287 bits (145), Expect = 3e-74 Identities = 264/304 (86%), Gaps = 6/304 (1%) Strand = Plus / Plus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2834336 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2834389 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2834390 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2834449 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2834450 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2834509 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2834510 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2834569 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2834570 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2834629 Query: 376 tcct 379 |||| Sbjct: 2834630 tcct 2834633 Score = 42.1 bits (21), Expect = 2.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 738 ctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||| |||||||| ||||||| Sbjct: 2835170 ctgggtagcaattgagtcaagctcatcaa 2835198
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 365 bits (184), Expect = 1e-97 Identities = 313/356 (87%) Strand = Plus / Plus Query: 385 atgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccg 444 |||||||| |||||||| || ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 2834845 atgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaatatcagcacca 2834904 Query: 445 ctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggccaaaggagac 504 ||||| ||||||||||| |||||||||||| |||| || | ||||||||||| ||| ||| Sbjct: 2834905 ctgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggccacaggtgac 2834964 Query: 505 ttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaagagggatgtag 564 |||| ||||||||||||||||||||| |||| || | ||||||| ||||| |||||| Sbjct: 2834965 ttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcagaggaatgtag 2835024 Query: 565 ataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtctggcctgttg 624 |||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||| Sbjct: 2835025 ataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatctggcctgtta 2835084 Query: 625 gtagcaccaatgatgaagacggttttcttagcattcatgccatccatctcagtcagcagc 684 ||||||||||| ||||| ||||||||||| || |||||||| ||||||||||||| || | Sbjct: 2835085 gtagcaccaataatgaacacggttttcttcgcgttcatgccgtccatctcagtcaacaac 2835144 Query: 685 tggttcagcactctatcagcagcacctccagcatccccactgctgcttcctctctg 740 ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 2835145 tggttcagcactctatcagcagcacctccggcatcaccaacactgcttcctctctg 2835200 Score = 287 bits (145), Expect = 3e-74 Identities = 264/304 (86%), Gaps = 6/304 (1%) Strand = Plus / Plus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2834447 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2834500 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2834501 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2834560 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2834561 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2834620 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2834621 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2834680 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2834681 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2834740 Query: 376 tcct 379 |||| Sbjct: 2834741 tcct 2834744 Score = 42.1 bits (21), Expect = 2.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 738 ctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||| |||||||| ||||||| Sbjct: 2835281 ctgggtagcaattgagtcaagctcatcaa 2835309
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 365 bits (184), Expect = 1e-97 Identities = 313/356 (87%) Strand = Plus / Plus Query: 385 atgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccg 444 |||||||| |||||||| || ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 106690 atgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaatatcagcacca 106749 Query: 445 ctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggccaaaggagac 504 ||||| ||||||||||| |||||||||||| |||| || | ||||||||||| ||| ||| Sbjct: 106750 ctgaaaccttgggtgtatttggcaagagcattcaggtctacatccttggccacaggtgac 106809 Query: 505 ttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaagagggatgtag 564 |||| ||||||||||||||||||||| |||| || | ||||||| ||||| |||||| Sbjct: 106810 ttccggaggcaagctttgaagatctgcagcctagattgatcatcaggcagaggaatgtag 106869 Query: 565 ataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtctggcctgttg 624 |||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||| Sbjct: 106870 ataagctgatcaagacgccctggccttagcaaggcagggtcaatgatatctggcctgtta 106929 Query: 625 gtagcaccaatgatgaagacggttttcttagcattcatgccatccatctcagtcagcagc 684 ||||||||||| ||||| ||||||||||| || |||||||| ||||||||||||| || | Sbjct: 106930 gtagcaccaataatgaacacggttttcttcgcgttcatgccgtccatctcagtcaacaac 106989 Query: 685 tggttcagcactctatcagcagcacctccagcatccccactgctgcttcctctctg 740 ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 106990 tggttcagcactctatcagcagcacctccggcatcaccaacactgcttcctctctg 107045 Score = 287 bits (145), Expect = 3e-74 Identities = 264/304 (86%), Gaps = 6/304 (1%) Strand = Plus / Plus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 106292 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 106345 Query: 136 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 195 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 106346 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 106405 Query: 196 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 255 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106406 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 106465 Query: 256 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 315 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 106466 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 106525 Query: 316 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 375 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 106526 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 106585 Query: 376 tcct 379 |||| Sbjct: 106586 tcct 106589 Score = 42.1 bits (21), Expect = 2.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 738 ctgggtagcaatcgagtcaagttcatcaa 766 |||||||||||| |||||||| ||||||| Sbjct: 107126 ctgggtagcaattgagtcaagctcatcaa 107154
>gb|BT017848.1| Zea mays clone EL01N0510F05.c mRNA sequence Length = 646 Score = 301 bits (152), Expect = 2e-78 Identities = 308/360 (85%) Strand = Plus / Minus Query: 171 gaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggta 230 ||||||||||||||| || || || || |||||||| || |||||||| ||||||||||| Sbjct: 392 gaaccggaactcgctgccaaacccgcgggactgctggagtgtctgggcgaaggcctggta 333 Query: 231 cttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagtg 290 |||||||||||||||||||||||| || ||||| || |||||||| |||||||||||||| Sbjct: 332 cttgcggatgtcggcgtcactcacgctgcgacgggcgtacttcatggactcctcgaagtg 273 Query: 291 ggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgtc 350 |||||| ||||||| || | || || |||||||| |||||||| || || |||||||| Sbjct: 272 agcagccttgatctcagcgatgtcgtctacctcgtcttcctccatagcctcggggttgtc 213 Query: 351 cttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgca 410 || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 212 tttgctgcgcctctccctctcgatatccttctcgatgttctccctgatggcatacttgca 153 Query: 411 agcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaag 470 || |||||||| || || |||||||| | ||||||| || |||||||| ||||| || Sbjct: 152 cgcgcgctggcagatctctgtgatatctgggacgctgaaaccctgggtgtatttggcgag 93 Query: 471 agcactcagatcaatatccttggccaaaggagacttcctgaggcaagctttgaagatctg 530 |||| ||| |||| ||||||||||| |||||||||| ||| | |||||||||||||| Sbjct: 92 agcattcaagtcaacatccttggccacaggagacttcttgaaagaggctttgaagatctg 33 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Minus Query: 73 atttaactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggcc 132 |||||||| ||||| |||||||| || ||||||| ||||||||||| || || ||| || Sbjct: 481 atttaactgtataagtcatcatcgtcagctgctgctgcagcggatgcgaagggatcgtcc 422 Query: 133 gcagcggcag 142 ||||| |||| Sbjct: 421 gcagcagcag 412
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 287 bits (145), Expect = 3e-74 Identities = 312/365 (85%), Gaps = 2/365 (0%) Strand = Plus / Minus Query: 377 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 436 |||||||||||||||| || || ||||| ||||| |||||||| || ||||| || |||| Sbjct: 15400851 ccttctcgatgttctctctaatcgcatatttgcatgcacgctgacagatttctgtaatat 15400792 Query: 437 cagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcca 496 | ||||| ||||| ||||||||||||||||||||||| ||| || | |||||| |||| Sbjct: 15400791 ctgcaccactgaagccttgggtgtacttggcaagagcgttcaagtccacatccttcgcca 15400732 Query: 497 aaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaagag 556 ||| ||||||||||||||||||||||| || ||| |||| || | ||||||| || | Sbjct: 15400731 caggggacttcctgaggcaagctttgaaaatttggagcctagattgctcatcaggcagtg 15400672 Query: 557 ggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtctg 616 | |||||||| |||||||| ||||||||||||||||||| ||| || ||||||||||| | Sbjct: 15400671 gaatgtagatcagctgatcgagacgccctggcctaagcaaggccggatctatgatgtcag 15400612 Query: 617 gcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctcag 676 ||||||| ||||| ||||| ||||| || || ||||| |||||||||||||||||||| | Sbjct: 15400611 gcctgtttgtagccccaataatgaaaacagtcttcttggcattcatgccatccatctctg 15400552 Query: 677 tcagcagctggttcagcactctatcagcagcacctccagcatc-cccactgctgcttcct 735 ||| |||||| |||||||| |||||||| |||||||||||||| ||||| ||||||||| Sbjct: 15400551 tcaacagctgattcagcaccctatcagctgcacctccagcatcacccac-actgcttcct 15400493 Query: 736 ctctg 740 ||||| Sbjct: 15400492 ctctg 15400488 Score = 194 bits (98), Expect = 3e-46 Identities = 182/210 (86%) Strand = Plus / Minus Query: 170 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 229 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 15401406 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 15401347 Query: 230 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 289 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 15401346 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 15401287 Query: 290 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 349 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 15401286 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 15401227 Query: 350 ccttcctccgcctctccctctcgatgtcct 379 |||| ||||||||||||||||| ||||||| Sbjct: 15401226 ccttactccgcctctccctctcaatgtcct 15401197 Score = 44.1 bits (22), Expect = 0.67 Identities = 52/62 (83%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 15401491 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 15401432 Query: 136 gc 137 || Sbjct: 15401431 gc 15401430
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 287 bits (145), Expect = 3e-74 Identities = 312/365 (85%), Gaps = 2/365 (0%) Strand = Plus / Minus Query: 377 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 436 |||||||||||||||| || || ||||| ||||| |||||||| || ||||| || |||| Sbjct: 118214 ccttctcgatgttctctctaatcgcatatttgcatgcacgctgacagatttctgtaatat 118155 Query: 437 cagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcca 496 | ||||| ||||| ||||||||||||||||||||||| ||| || | |||||| |||| Sbjct: 118154 ctgcaccactgaagccttgggtgtacttggcaagagcgttcaagtccacatccttcgcca 118095 Query: 497 aaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaagag 556 ||| ||||||||||||||||||||||| || ||| |||| || | ||||||| || | Sbjct: 118094 caggggacttcctgaggcaagctttgaaaatttggagcctagattgctcatcaggcagtg 118035 Query: 557 ggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtctg 616 | |||||||| |||||||| ||||||||||||||||||| ||| || ||||||||||| | Sbjct: 118034 gaatgtagatcagctgatcgagacgccctggcctaagcaaggccggatctatgatgtcag 117975 Query: 617 gcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctcag 676 ||||||| ||||| ||||| ||||| || || ||||| |||||||||||||||||||| | Sbjct: 117974 gcctgtttgtagccccaataatgaaaacagtcttcttggcattcatgccatccatctctg 117915 Query: 677 tcagcagctggttcagcactctatcagcagcacctccagcatc-cccactgctgcttcct 735 ||| |||||| |||||||| |||||||| |||||||||||||| ||||| ||||||||| Sbjct: 117914 tcaacagctgattcagcaccctatcagctgcacctccagcatcacccac-actgcttcct 117856 Query: 736 ctctg 740 ||||| Sbjct: 117855 ctctg 117851 Score = 194 bits (98), Expect = 3e-46 Identities = 182/210 (86%) Strand = Plus / Minus Query: 170 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 229 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 118769 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 118710 Query: 230 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 289 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 118709 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 118650 Query: 290 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 349 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 118649 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 118590 Query: 350 ccttcctccgcctctccctctcgatgtcct 379 |||| ||||||||||||||||| ||||||| Sbjct: 118589 ccttactccgcctctccctctcaatgtcct 118560 Score = 44.1 bits (22), Expect = 0.67 Identities = 52/62 (83%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 118854 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 118795 Query: 136 gc 137 || Sbjct: 118794 gc 118793
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 287 bits (145), Expect = 3e-74 Identities = 312/365 (85%), Gaps = 2/365 (0%) Strand = Plus / Minus Query: 377 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 436 |||||||||||||||| || || ||||| ||||| |||||||| || ||||| || |||| Sbjct: 15409092 ccttctcgatgttctctctaatcgcatatttgcatgcacgctgacagatttctgtaatat 15409033 Query: 437 cagcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatccttggcca 496 | ||||| ||||| ||||||||||||||||||||||| ||| || | |||||| |||| Sbjct: 15409032 ctgcaccactgaagccttgggtgtacttggcaagagcgttcaagtccacatccttcgcca 15408973 Query: 497 aaggagacttcctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaagag 556 ||| ||||||||||||||||||||||| || ||| |||| || | ||||||| || | Sbjct: 15408972 caggggacttcctgaggcaagctttgaaaatttggagcctagattgctcatcaggcagtg 15408913 Query: 557 ggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtctg 616 | |||||||| |||||||| ||||||||||||||||||| ||| || ||||||||||| | Sbjct: 15408912 gaatgtagatcagctgatcgagacgccctggcctaagcaaggccggatctatgatgtcag 15408853 Query: 617 gcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctcag 676 ||||||| ||||| ||||| ||||| || || ||||| |||||||||||||||||||| | Sbjct: 15408852 gcctgtttgtagccccaataatgaaaacagtcttcttggcattcatgccatccatctctg 15408793 Query: 677 tcagcagctggttcagcactctatcagcagcacctccagcatc-cccactgctgcttcct 735 ||| |||||| |||||||| |||||||| |||||||||||||| ||||| ||||||||| Sbjct: 15408792 tcaacagctgattcagcaccctatcagctgcacctccagcatcacccac-actgcttcct 15408734 Query: 736 ctctg 740 ||||| Sbjct: 15408733 ctctg 15408729 Score = 194 bits (98), Expect = 3e-46 Identities = 182/210 (86%) Strand = Plus / Minus Query: 170 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 229 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 15409647 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 15409588 Query: 230 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 289 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 15409587 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 15409528 Query: 290 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 349 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 15409527 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 15409468 Query: 350 ccttcctccgcctctccctctcgatgtcct 379 |||| ||||||||||||||||| ||||||| Sbjct: 15409467 ccttactccgcctctccctctcaatgtcct 15409438 Score = 44.1 bits (22), Expect = 0.67 Identities = 52/62 (83%) Strand = Plus / Minus Query: 76 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 135 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 15409732 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 15409673 Query: 136 gc 137 || Sbjct: 15409672 gc 15409671
>ref|NM_115183.2| Arabidopsis thaliana ATP binding / hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G53230 mRNA, complete cds Length = 2672 Score = 222 bits (112), Expect = 1e-54 Identities = 298/360 (82%) Strand = Plus / Minus Query: 360 cctctccctctcgatgtccttctcgatgttctccctgatggcatacttgcaagcacgctg 419 ||||||| |||| || |||||||||||||| || ||||| ||||||||||||| |||||| Sbjct: 2186 cctctccttctcaatatccttctcgatgttttctctgatcgcatacttgcaagaacgctg 2127 Query: 420 gcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaagagcactcag 479 |||||| || ||||| || ||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 2126 gcaaatctctgtgatgtccgcaccactgaagccttgggtgtacttagcaagagccctcag 2067 Query: 480 atcaatatccttggccaaaggagacttcctgaggcaagctttgaagatctggtgcctcga 539 |||| ||| || |||| ||| || ||||| | ||||| || |||||||||| | || Sbjct: 2066 gtcaacatctttcgccacaggtgatttcctcaagcaagacttaaagatctggtaacgaga 2007 Query: 540 atcgacatcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggc 599 || ||||||||||||| |||||||| |||||||| ||||| || || | || || || Sbjct: 2006 ctcctcatcaggaagaggaatgtagatgagctgatcgagacgaccaggacgcagaagtgc 1947 Query: 600 agggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcatt 659 ||| || || |||||||| ||||| ||||| || ||||||||||| || ||||||||||| Sbjct: 1946 aggatcaataatgtctggtctgtttgtagctccgatgatgaagaccgtcttcttagcatt 1887 Query: 660 catgccatccatctcagtcagcagctggttcagcactctatcagcagcacctccagcatc 719 ||| ||||||||||| || || |||||||||| |||||||| || ||||| |||||||| Sbjct: 1886 cattccatccatctccgtaagaagctggttcaatactctatctgctgcaccaccagcatc 1827
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2 Length = 92611 Score = 222 bits (112), Expect = 1e-54 Identities = 298/360 (82%) Strand = Plus / Minus Query: 360 cctctccctctcgatgtccttctcgatgttctccctgatggcatacttgcaagcacgctg 419 ||||||| |||| || |||||||||||||| || ||||| ||||||||||||| |||||| Sbjct: 50254 cctctccttctcaatatccttctcgatgttttctctgatcgcatacttgcaagaacgctg 50195 Query: 420 gcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaagagcactcag 479 |||||| || ||||| || ||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 50194 gcaaatctctgtgatgtccgcaccactgaagccttgggtgtacttagcaagagccctcag 50135 Query: 480 atcaatatccttggccaaaggagacttcctgaggcaagctttgaagatctggtgcctcga 539 |||| ||| || |||| ||| || ||||| | ||||| || |||||||||| | || Sbjct: 50134 gtcaacatctttcgccacaggtgatttcctcaagcaagacttaaagatctggtaacgaga 50075 Query: 540 atcgacatcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggc 599 || ||||||||||||| |||||||| |||||||| ||||| || || | || || || Sbjct: 50074 ctcctcatcaggaagaggaatgtagatgagctgatcgagacgaccaggacgcagaagtgc 50015 Query: 600 agggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcatt 659 ||| || || |||||||| ||||| ||||| || ||||||||||| || ||||||||||| Sbjct: 50014 aggatcaataatgtctggtctgtttgtagctccgatgatgaagaccgtcttcttagcatt 49955 Query: 660 catgccatccatctcagtcagcagctggttcagcactctatcagcagcacctccagcatc 719 ||| ||||||||||| || || |||||||||| |||||||| || ||||| |||||||| Sbjct: 49954 cattccatccatctccgtaagaagctggttcaatactctatctgctgcaccaccagcatc 49895
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G09840 (CDC48) mRNA, complete cds Length = 2797 Score = 186 bits (94), Expect = 7e-44 Identities = 232/278 (83%) Strand = Plus / Minus Query: 198 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 257 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 2461 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 2402 Query: 258 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 317 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 2401 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 2342 Query: 318 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 377 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 2341 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 2282 Query: 378 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 437 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 2281 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 2222 Query: 438 agcaccgctgaacccttgggtgtacttggcaagagcac 475 |||||| ||||| || || ||||| || ||||| |||| Sbjct: 2221 agcaccactgaaaccctgagtgtatttagcaagtgcac 2184 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 610 atgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatcc 669 ||||| || ||||||||||| || |||||||||||||||||||| |||||||| || ||| Sbjct: 2049 atgtcaggtctgttggtagctccgatgatgaagacggttttcttggcattcattccgtcc 1990 Query: 670 atctcagtcagcagctggttcagcactctatcagcagcacc 710 |||||||||| |||||||||| ||||| || |||||||| Sbjct: 1989 atctcagtcaaaagctggttcaagactctgtccgcagcacc 1949
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds Length = 2628 Score = 186 bits (94), Expect = 7e-44 Identities = 232/278 (83%) Strand = Plus / Minus Query: 198 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 257 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 2417 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 2358 Query: 258 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 317 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 2357 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 2298 Query: 318 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 377 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 2297 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 2238 Query: 378 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 437 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 2237 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 2178 Query: 438 agcaccgctgaacccttgggtgtacttggcaagagcac 475 |||||| ||||| || || ||||| || ||||| |||| Sbjct: 2177 agcaccactgaaaccctgagtgtatttagcaagtgcac 2140 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 610 atgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatcc 669 ||||| || ||||||||||| || |||||||||||||||||||| |||||||| || ||| Sbjct: 2005 atgtcaggtctgttggtagctccgatgatgaagacggttttcttggcattcattccgtcc 1946 Query: 670 atctcagtcagcagctggttcagcactctatcagcagcacc 710 |||||||||| |||||||||| ||||| || |||||||| Sbjct: 1945 atctcagtcaaaagctggttcaagactctgtccgcagcacc 1905
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum ATPase (F8A24.11) mRNA, complete cds Length = 2730 Score = 186 bits (94), Expect = 7e-44 Identities = 232/278 (83%) Strand = Plus / Minus Query: 198 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 257 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 2451 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 2392 Query: 258 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 317 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 2391 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 2332 Query: 318 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 377 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 2331 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 2272 Query: 378 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 437 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 2271 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 2212 Query: 438 agcaccgctgaacccttgggtgtacttggcaagagcac 475 |||||| ||||| || || ||||| || ||||| |||| Sbjct: 2211 agcaccactgaaaccctgagtgtatttagcaagtgcac 2174 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 610 atgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatcc 669 ||||| || ||||||||||| || |||||||||||||||||||| |||||||| || ||| Sbjct: 2039 atgtcaggtctgttggtagctccgatgatgaagacggttttcttggcattcattccgtcc 1980 Query: 670 atctcagtcagcagctggttcagcactctatcagcagcacc 710 |||||||||| |||||||||| ||||| || |||||||| Sbjct: 1979 atctcagtcaaaagctggttcaagactctgtccgcagcacc 1939
>dbj|AK222120.1| Arabidopsis thaliana mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL22-93-G21 Length = 697 Score = 186 bits (94), Expect = 7e-44 Identities = 232/278 (83%) Strand = Plus / Minus Query: 198 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 257 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 351 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 292 Query: 258 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 317 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 291 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 232 Query: 318 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 377 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 231 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 172 Query: 378 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 437 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 171 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 112 Query: 438 agcaccgctgaacccttgggtgtacttggcaagagcac 475 |||||| ||||| || || ||||| || ||||| |||| Sbjct: 111 agcaccactgaaaccctgagtgtatttagcaagtgcac 74
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA, complete cds Length = 2638 Score = 186 bits (94), Expect = 7e-44 Identities = 232/278 (83%) Strand = Plus / Minus Query: 198 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 257 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 2400 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 2341 Query: 258 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 317 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 2340 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 2281 Query: 318 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 377 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 2280 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 2221 Query: 378 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 437 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 2220 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 2161 Query: 438 agcaccgctgaacccttgggtgtacttggcaagagcac 475 |||||| ||||| || || ||||| || ||||| |||| Sbjct: 2160 agcaccactgaaaccctgagtgtatttagcaagtgcac 2123 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 610 atgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatcc 669 ||||| || ||||||||||| || |||||||||||||||||||| |||||||| || ||| Sbjct: 1988 atgtcaggtctgttggtagctccgatgatgaagacggttttcttggcattcattccgtcc 1929 Query: 670 atctcagtcagcagctggttcagcactctatcagcagcacc 710 |||||||||| |||||||||| ||||| || |||||||| Sbjct: 1928 atctcagtcaaaagctggttcaagactctgtccgcagcacc 1888
>emb|Y09396.1|CACAFP C.annuum mRNA for CDC48p-like protein Length = 2682 Score = 163 bits (82), Expect = 1e-36 Identities = 438/556 (78%), Gaps = 3/556 (0%) Strand = Plus / Minus Query: 211 gtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacgacgcgcatac 270 ||||| ||||| |||||||| ||||| || || || ||||| |||||||| || |||||| Sbjct: 2327 gtctgagcaaatgcctggtatttgcgtatatcagcatcactgacactacgtcgtgcatac 2268 Query: 271 ttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatcaacctcgtcctcc 330 ||||| || |||||||| || || | | ||||||||| || ||||| || || || ||| Sbjct: 2267 ttcatagattcctcgaaatgagcgggcttgatctctggtacttcatcgacatcttcatcc 2208 Query: 331 tccatcgcttcagggttgtccttcctccgcctctccctctcgatgtccttctcgatgttc 390 || | |||||||| |||| || | | ||||||| || ||||| ||||| |||||| Sbjct: 2207 ---attgaatcagggttttcctgtcttctcttctccctttctatgtctttctctatgttc 2151 Query: 391 tccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccgctgaac 450 ||||| |||||||| ||||| || || || ||||| ||||||| |||||| || || || Sbjct: 2150 tccctaatggcatatttgcaggctcgttgacaaatctcagtgacatcagccccactaaat 2091 Query: 451 ccttgggtgtacttggcaagagcactcagatcaatatccttggccaaaggagacttcctg 510 || || || | ||||| ||||| |||| |||||||||||| | || || || || ||| Sbjct: 2090 ccctgagtatgtttggcgagagctctcaaatcaatatcctttgataagggggattttctg 2031 Query: 511 aggcaagctttgaagatctggtgcctcgaatcgacatcaggaagagggatgtagataagc 570 ||||| || ||||| ||||| || | ||||| |||| || ||||| || || || | | Sbjct: 2030 aggcatgccttgaaaatctgatggcgtgaatcctcatctggtagaggaatataaattaac 1971 Query: 571 tgatcaagacgccctggcctaagcagggcagggtctatgatgtctggcctgttggtagca 630 ||||||||||| || || | || || |||||||| || || || || ||||| || || Sbjct: 1970 tgatcaagacggccaggacgcagaagtgcagggtcaattatatcaggtctgtttgtggcc 1911 Query: 631 ccaatgatgaagacggttttcttagcattcatgccatccatctcagtcagcagctggttc 690 ||||| || || || || ||||| ||||||||||||||||| ||||||| || |||||| Sbjct: 1910 ccaataataaaaacagtcttctttgcattcatgccatccatttcagtcaaaagttggttc 1851 Query: 691 agcactctatcagcagcacctccagcatccccactgctgcttcctctctgggtagcaatc 750 || || | |||||| || ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1850 agaacccgatcagctgctcctccagcatctccactgctgcttcctctctgagtagcaata 1791 Query: 751 gagtcaagttcatcaa 766 ||||| || ||||||| Sbjct: 1790 gagtcgagctcatcaa 1775
>gb|AY232675.1| Mirabilis jalapa CDC48-like protein mRNA, partial cds Length = 669 Score = 153 bits (77), Expect = 1e-33 Identities = 356/449 (79%) Strand = Plus / Minus Query: 271 ttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatcaacctcgtcctcc 330 ||||| |||||||| ||||| ||||| | || || |||||||| || || | |||||| Sbjct: 464 ttcatggactcctcaaagtgagcagcttttatttcagcaacctcgtcctccacatcctcc 405 Query: 331 tccatcgcttcagggttgtccttcctccgcctctccctctcgatgtccttctcgatgttc 390 |||||||| ||||| || || | || | | |||| ||||| || |||||||| |||||| Sbjct: 404 tccatcgcctcaggattctcacttcttctcttctctctctcaatatccttctcaatgttc 345 Query: 391 tccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccgctgaac 450 |||||||||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 344 tccctgatggcatatttgcaagcacgttggcatatttcggtgatatctgcaccgctgaaa 285 Query: 451 ccttgggtgtacttggcaagagcactcagatcaatatccttggccaaaggagacttcctg 510 || || ||||| || ||||| || || | ||||| ||| || || | |||||||||||| Sbjct: 284 ccctgagtgtatttagcaagtgccctaatatcaacatctttagcaataggagacttcctc 225 Query: 511 aggcaagctttgaagatctggtgcctcgaatcgacatcaggaagagggatgtagataagc 570 | | || ||||| |||||||| | ||||| |||| || | ||||||||||||||| Sbjct: 224 aaggctgccttgaaaatctggtgacgagaatcctcatctggtaaagggatgtagataagt 165 Query: 571 tgatcaagacgccctggcctaagcagggcagggtctatgatgtctggcctgttggtagca 630 ||||||||||| || || | || ||||| || || || || || || ||||| || ||| Sbjct: 164 tgatcaagacggccaggtcgcagaagggctggatcaataatatcaggtctgtttgtggca 105 Query: 631 ccaatgatgaagacggttttcttagcattcatgccatccatctcagtcagcagctggttc 690 ||||| ||||| || || ||||| ||| |||||||||||| || |||| || |||||| Sbjct: 104 ccaataatgaacactgtcttctttgcagacatgccatccatttctgtcaaaagttggttc 45 Query: 691 agcactctatcagcagcacctccagcatc 719 || || || |||||||| || |||||||| Sbjct: 44 agaaccctgtcagcagcgccaccagcatc 16
>gb|DQ359725.1| Glycine max plamsma membrane-associated AAA-ATPase mRNA, complete cds Length = 2628 Score = 153 bits (77), Expect = 1e-33 Identities = 439/559 (78%), Gaps = 3/559 (0%) Strand = Plus / Minus Query: 211 gtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacgacgcgcatac 270 ||||| ||||| ||||| |||||||| || || || ||||| ||||| | || ||| || Sbjct: 2345 gtctgagcaaatgcctgatacttgcgaatatcagcatcactaacactcctccgtgcaaac 2286 Query: 271 ttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatcaacctcg---tcc 327 ||||| |||||||| || || |||||| ||||||| ||||| || || | || || Sbjct: 2285 ttcattgactcctcaaaatgagcagccttgatctccgcaacttcgtcgtcgacggtatct 2226 Query: 328 tcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtccttctcgatg 387 || ||||| || |||||||| ||| | ||| |||||| | ||| ||||||||||| ||| Sbjct: 2225 tcatccatggcctcagggttttccctactcttcctctctcgctcaatgtccttctctatg 2166 Query: 388 ttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccgctg 447 || || || |||||||| ||||| || |||||||| ||||| || ||||||||||| ||| Sbjct: 2165 ttttctcttatggcatatttgcatgctcgctggcatatttctgtaatatcagcaccactg 2106 Query: 448 aacccttgggtgtacttggcaagagcactcagatcaatatccttggccaaaggagacttc 507 |||||||| |||| | | || | || |||| ||||| || || || | ||| |||||| Sbjct: 2105 aacccttgagtgtgcctagccaatgctctcaaatcaacattttttgcgataggtgacttc 2046 Query: 508 ctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaagagggatgtagata 567 || | ||| ||||| ||||| || |||| ||||| ||||||| ||||| || ||||| Sbjct: 2045 ctcaagcaggctttaaagatttgatgccgggaatcctcatcagggagaggaatatagatc 1986 Query: 568 agctgatcaagacgccctggcctaagcagggcagggtctatgatgtctggcctgttggta 627 | ||||| ||||| ||||| | ||| || || ||||| |||||||| || ||||| || Sbjct: 1985 aattgatccagacggcctggtcgaagaagtgctgggtcaatgatgtcaggtctgttagtt 1926 Query: 628 gcaccaatgatgaagacggttttcttagcattcatgccatccatctcagtcagcagctgg 687 || ||||| ||||| || || || || ||| |||||||||||| ||||||| || || Sbjct: 1925 gccccaattatgaacacagtctttttggcagacatgccatccatttcagtcaaaagttga 1866 Query: 688 ttcagcactctatcagcagcacctccagcatccccactgctgcttcctctctgggtagca 747 || || ||||||||||| ||||| |||||||||||| |||||||||||||| || ||| Sbjct: 1865 tttagaactctatcagccgcaccaccagcatccccaacactgcttcctctctgagtggca 1806 Query: 748 atcgagtcaagttcatcaa 766 || |||||||| ||||||| Sbjct: 1805 atagagtcaagctcatcaa 1787
>gb|U20213.1|GMU20213 Glycine max valosin-containing protein mRNA, complete cds Length = 2654 Score = 153 bits (77), Expect = 1e-33 Identities = 439/559 (78%), Gaps = 3/559 (0%) Strand = Plus / Minus Query: 211 gtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacgacgcgcatac 270 ||||| ||||| ||||| |||||||| || || || ||||| ||||| | || ||| || Sbjct: 2365 gtctgagcaaatgcctgatacttgcgaatatcagcatcactaacactcctccgtgcaaac 2306 Query: 271 ttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatcaacctcg---tcc 327 ||||| |||||||| || || |||||| ||||||| ||||| || || | || || Sbjct: 2305 ttcattgactcctcaaaatgagcagccttgatctccgcaacttcgtcgtcgacggtatct 2246 Query: 328 tcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtccttctcgatg 387 || ||||| || |||||||| ||| | ||| |||||| | ||| ||||||||||| ||| Sbjct: 2245 tcatccatggcctcagggttttccctactcttcctctctcgctcaatgtccttctctatg 2186 Query: 388 ttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccgctg 447 || || || |||||||| ||||| || |||||||| ||||| || ||||||||||| ||| Sbjct: 2185 ttttctcttatggcatatttgcatgctcgctggcatatttctgtaatatcagcaccactg 2126 Query: 448 aacccttgggtgtacttggcaagagcactcagatcaatatccttggccaaaggagacttc 507 |||||||| |||| | | || | || |||| ||||| || || || | ||| |||||| Sbjct: 2125 aacccttgagtgtgcctagccaatgctctcaaatcaacattttttgcgataggtgacttc 2066 Query: 508 ctgaggcaagctttgaagatctggtgcctcgaatcgacatcaggaagagggatgtagata 567 || | ||| ||||| ||||| || |||| ||||| ||||||| ||||| || ||||| Sbjct: 2065 ctcaagcaggctttaaagatttgatgccgggaatcctcatcagggagaggaatatagatc 2006 Query: 568 agctgatcaagacgccctggcctaagcagggcagggtctatgatgtctggcctgttggta 627 | ||||| ||||| ||||| | ||| || || ||||| |||||||| || ||||| || Sbjct: 2005 aattgatccagacggcctggtcgaagaagtgctgggtcaatgatgtcaggtctgttagtt 1946 Query: 628 gcaccaatgatgaagacggttttcttagcattcatgccatccatctcagtcagcagctgg 687 || ||||| ||||| || || || || ||| |||||||||||| ||||||| || || Sbjct: 1945 gccccaattatgaacacagtctttttggcagacatgccatccatttcagtcaaaagttga 1886 Query: 688 ttcagcactctatcagcagcacctccagcatccccactgctgcttcctctctgggtagca 747 || || ||||||||||| ||||| |||||||||||| |||||||||||||| || ||| Sbjct: 1885 tttagaactctatcagccgcaccaccagcatccccaacactgcttcctctctgagtggca 1826 Query: 748 atcgagtcaagttcatcaa 766 || |||||||| ||||||| Sbjct: 1825 atagagtcaagctcatcaa 1807
>gb|BT014585.1| Lycopersicon esculentum clone 134043F, mRNA sequence Length = 2708 Score = 145 bits (73), Expect = 2e-31 Identities = 322/405 (79%) Strand = Plus / Minus Query: 362 tctccctctcgatgtccttctcgatgttctccctgatggcatacttgcaagcacgctggc 421 ||||||| || || || ||||| ||||||||||| |||||||| ||||| | || || | Sbjct: 2214 tctccctttctatatctttctctatgttctcccttatggcatatttgcaggatcgttgac 2155 Query: 422 aaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaagagcactcagat 481 |||| |||||||||||||| || || || ||||| || | ||||| ||||| ||||||| Sbjct: 2154 aaatctcagtgatatcagccccactaaatccttgagtatgtttggcgagagctctcagat 2095 Query: 482 caatatccttggccaaaggagacttcctgaggcaagctttgaagatctggtgcctcgaat 541 |||||||||| | || || || || ||||| || || ||||| ||||| || | |||| Sbjct: 2094 caatatcctttgataagggggattttctgagacatgccttgaaaatctgatggcgtgaat 2035 Query: 542 cgacatcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcag 601 | |||| || ||||| || || || | ||| |||||||| || || | ||| || |||| Sbjct: 2034 cttcatctggcagaggaatataaattaactggtcaagacggccaggtcgaagaagtgcag 1975 Query: 602 ggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattca 661 |||| || || || |||||||| || || ||||| || || || || ||||| ||||||| Sbjct: 1974 ggtcaattatatcaggcctgtttgtggccccaattataaaaacagtcttctttgcattca 1915 Query: 662 tgccatccatctcagtcagcagctggttcagcactctatcagcagcacctccagcatccc 721 |||||||||| |||||||| || || |||| || | |||||| || ||||||||||| | Sbjct: 1914 tgccatccatttcagtcagaagttgattcaaaacacgatcagctgctcctccagcatctc 1855 Query: 722 cactgctgcttcctctctgggtagcaatcgagtcaagttcatcaa 766 |||||||||| || ||||| |||||||| |||||||| ||||||| Sbjct: 1854 cactgctgctgcccctctgagtagcaatagagtcaagctcatcaa 1810 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 198 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 257 ||||||||| | ||||| ||||| |||||||| ||||| || || || || || ||||| Sbjct: 2375 agactgctgtaatgtctgagcaaatgcctggtatttgcgtatatcagcatcgctgacact 2316 Query: 258 acgacgcgcatacttcatcgactcctcgaagtg 290 ||||| ||||||||||| |||||||| ||||| Sbjct: 2315 ccgacgggcatacttcatagactcctcaaagtg 2283
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 198 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 257 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 44013 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 44072 Query: 258 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctg 307 | |||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 44073 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctg 44122 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 610 atgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatcc 669 ||||| || ||||||||||| || |||||||||||||||||||| |||||||| || ||| Sbjct: 44514 atgtcaggtctgttggtagctccgatgatgaagacggttttcttggcattcattccgtcc 44573 Query: 670 atctcagtcagcagctggttcagcactctatcagcagcacc 710 |||||||||| |||||||||| ||||| || |||||||| Sbjct: 44574 atctcagtcaaaagctggttcaagactctgtccgcagcacc 44614 Score = 85.7 bits (43), Expect = 2e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 377 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 436 ||||||| ||||| || |||||||| ||||||||||| | ||||||||| |||||||||| Sbjct: 44281 ccttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatat 44340 Query: 437 cagcaccgctgaacccttgggtgtacttggcaagagcac 475 ||||||| ||||| || || ||||| || ||||| |||| Sbjct: 44341 cagcaccactgaaaccctgagtgtatttagcaagtgcac 44379
>gb|AY456394.1| 'Chlorella' ellipsoidea cell division cycle protein 48 mRNA, partial cds Length = 2033 Score = 113 bits (57), Expect = 9e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 201 ctgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacg 260 |||||||||||||||||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 1709 ctgctgcagcgtctgggcaaaggcctggtacttgcggatgtctgcgtcgctgacagagcg 1650 Query: 261 acgcgcatacttcatcgactcctcgaagtgggc 293 ||| ||||||||||| | ||||||||||||||| Sbjct: 1649 acgggcatacttcatggcctcctcgaagtgggc 1617 Score = 113 bits (57), Expect = 9e-22 Identities = 126/149 (84%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| ||||| || || || || |||| |||||||| | ||| |||||||| Sbjct: 1357 gggatgtagatcagctggtccagtcggccaggccgcagcagggcggagtcgatgatgtcc 1298 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 ||||||||||| || ||||||||||||||||| ||||| | |||||||| |||||||| Sbjct: 1297 ggcctgttggttgctccaatgatgaagacggtcttcttggagttcatgccgtccatctcc 1238 Query: 676 gtcagcagctggttcagcactctatcagc 704 ||||||| |||||||||||| | |||||| Sbjct: 1237 gtcagcatctggttcagcacgcgatcagc 1209 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 357 ccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgca 410 |||| |||||||||| ||||||||||| ||||| || |||||||| || ||||| Sbjct: 1556 ccgcttctccctctcaatgtccttctcaatgttttctctgatggcgtatttgca 1503
>gb|BT012783.1| Lycopersicon esculentum clone 113773R, mRNA sequence Length = 2684 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 598 gcagggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagca 657 |||||||| || || || |||||||| || || ||||| || || || |||||||| ||| Sbjct: 1953 gcagggtcaataatatcaggcctgtttgtggccccaataataaaaacagttttctttgca 1894 Query: 658 ttcatgccatccatctcagtcagcagctggttcagcactctatcagcagcacctccagca 717 |||||||||||||| |||||||| || ||||| || || | |||||| || || |||||| Sbjct: 1893 ttcatgccatccatttcagtcagaagttggttgagaacccgatcagctgctccaccagca 1834 Query: 718 tccccactgctgcttcctctctgggtagcaatcgagtcaagttcatcaa 766 || ||||| |||||||| ||||| || ||||| |||||||| ||||||| Sbjct: 1833 tcaccactactgcttcccctctgagtggcaatagagtcaagctcatcaa 1785 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 211 gtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacgacgcgcatac 270 ||||| ||||| |||||||| || || || ||||| ||||||||||| || || |||||| Sbjct: 2340 gtctgagcaaatgcctggtatttacgaatatcggcatcactcacacttcgtcgtgcatac 2281 Query: 271 ttcatcgactcctcgaagtgggcagccctgatctctg 307 ||||| |||||||| || || |||| | ||||||||| Sbjct: 2280 ttcatggactcctcaaaatgagcaggcttgatctctg 2244 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Minus Query: 379 ttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatca 438 ||||| || |||||||| |||||||| ||||| || || || || || ||||||||||| Sbjct: 2172 ttctcaatattctcccttatggcatatttgcaggcccgttgacagatctcagtgatatcg 2113 Query: 439 gcaccgctgaacccttgggtgtacttggcaagagcactcagatcaatatc 488 || || || || || || || || ||||||||||| |||| ||||||||| Sbjct: 2112 gctccactaaatccctgagtatatttggcaagagctctcaaatcaatatc 2063
>ref|XM_774925.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC575609), mRNA Length = 3597 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 |||||||||||||||||||| ||||| ||||| | || | ||||| ||||| ||||||| Sbjct: 1766 gggatgtagataagctgatctagacgtcctggacgtaggatggcagagtctacgatgtct 1707 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 ||||||||||| ||||| |||||||||||| | ||||| | ||| |||||||||||| Sbjct: 1706 ggcctgttggttgcaccgatgatgaagacgttcttcttggagcccataccatccatctca 1647 Query: 676 gtcagcagctggtt 689 ||||| | |||||| Sbjct: 1646 gtcagaacctggtt 1633 Score = 46.1 bits (23), Expect = 0.17 Identities = 56/67 (83%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtactt 464 |||||| ||||||||||| || || || | ||||||||| ||||| || |||||| ||| Sbjct: 1917 cttgcaggcacgctggcagatctctgtcagatcagcaccactgaatccctgggtgacctt 1858 Query: 465 ggcaaga 471 ||||||| Sbjct: 1857 ggcaaga 1851
>ref|XM_796615.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 2 (LOC575609), mRNA Length = 3621 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 |||||||||||||||||||| ||||| ||||| | || | ||||| ||||| ||||||| Sbjct: 1766 gggatgtagataagctgatctagacgtcctggacgtaggatggcagagtctacgatgtct 1707 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 ||||||||||| ||||| |||||||||||| | ||||| | ||| |||||||||||| Sbjct: 1706 ggcctgttggttgcaccgatgatgaagacgttcttcttggagcccataccatccatctca 1647 Query: 676 gtcagcagctggtt 689 ||||| | |||||| Sbjct: 1646 gtcagaacctggtt 1633 Score = 46.1 bits (23), Expect = 0.17 Identities = 56/67 (83%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtactt 464 |||||| ||||||||||| || || || | ||||||||| ||||| || |||||| ||| Sbjct: 1917 cttgcaggcacgctggcagatctctgtcagatcagcaccactgaatccctgggtgacctt 1858 Query: 465 ggcaaga 471 ||||||| Sbjct: 1857 ggcaaga 1851
>gb|BC007562.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:2988964), partial cds Length = 2537 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 1463 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 1404 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 1403 caatgatgtcaggccggttggtagcgccaatgatgaa 1367 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 1603 cttgcaagcacgctggcaaat 1583
>gb|BC023563.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:4422977), **** WARNING: chimeric clone **** Length = 5159 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 4081 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 4022 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 4021 caatgatgtcaggccggttggtagcgccaatgatgaa 3985 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 4221 cttgcaagcacgctggcaaat 4201
>gb|BC021055.1| Homo sapiens cDNA clone IMAGE:2822943, **** WARNING: chimeric clone **** Length = 4821 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 2244 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 2185 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 2184 caatgatgtcaggccggttggtagcgccaatgatgaa 2148 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 2384 cttgcaagcacgctggcaaat 2364
>ref|NM_007126.2| Homo sapiens valosin-containing protein (VCP), mRNA Length = 3198 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 2160 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 2101 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 2100 caatgatgtcaggccggttggtagcgccaatgatgaa 2064 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 2300 cttgcaagcacgctggcaaat 2280
>gb|BC096751.1| Homo sapiens cDNA clone IMAGE:5296598, containing frame-shift errors Length = 2894 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 2196 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 2137 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 2136 caatgatgtcaggccggttggtagcgccaatgatgaa 2100 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 2336 cttgcaagcacgctggcaaat 2316
>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a novel gene, the VCP gene for valosin-containing protein, the FANCG gene for Fanconi anemia, complementation group G (FAG, XRCC9), the gene for phosphatidylinositol glycan class O (PIGO), a novel gene, the STOML2 gene for stomatin (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539) (FLJ11560), a zinc finger protein pseudogene, the 5' end of the UNC13 gene for unc-13-like (C. elegans) (hmunc13) and nine CpG islands, complete sequence Length = 195102 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 29266 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 29325 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 29326 caatgatgtcaggccggttggtagcgccaatgatgaa 29362 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 28853 cttgcaagcacgctggcaaat 28873
>emb|AL137377.1|HSM802065 Homo sapiens mRNA; cDNA DKFZp434K0126 (from clone DKFZp434K0126) Length = 1862 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 823 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 764 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 763 caatgatgtcaggccggttggtagcgccaatgatgaa 727 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 963 cttgcaagcacgctggcaaat 943
>emb|CR606334.1| full-length cDNA clone CS0DM007YL14 of Fetal liver of Homo sapiens (human) Length = 2858 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 2187 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 2128 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 2127 caatgatgtcaggccggttggtagcgccaatgatgaa 2091 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 2331 cttgcaagcacgctggcaaat 2311
>gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659, complete sequence Length = 86765 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 39456 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 39515 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 39516 caatgatgtcaggccggttggtagcgccaatgatgaa 39552 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 39043 cttgcaagcacgctggcaaat 39063
>gb|AF100752.1|AF100752 Homo sapiens transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2887 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 2160 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 2101 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 2100 caatgatgtcaggccggttggtagcgccaatgatgaa 2064 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 2300 cttgcaagcacgctggcaaat 2280
>gb|BC110913.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone MGC:131997 IMAGE:6502535), complete cds Length = 3212 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| |||||||||||||| || || || || | |||||| | Sbjct: 2147 catcaggaagtgggatgtagatgagctgatcaagacggccaggtctgaggatggcaggat 2088 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 2087 caatgatgtcaggccggttggtagcgccaatgatgaa 2051 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 2287 cttgcaagcacgctggcaaat 2267
>gb|AF313486.1|AF313485S2 Homo sapiens tissue-type kidney valosin-containing protein mRNA, partial cds Length = 1303 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||||||||| ||||||||| |||| || || || || | |||||| | Sbjct: 834 catcaggaagtgggatgtagatgagctgatcaggacggccaggtctgaggatggcaggat 775 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaa 641 | |||||||| |||| ||||||||| ||||||||||| Sbjct: 774 caatgatgtcaggccggttggtagcgccaatgatgaa 738 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cttgcaagcacgctggcaaat 425 ||||||||||||||||||||| Sbjct: 973 cttgcaagcacgctggcaaat 953
>ref|NM_120412.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G03340 mRNA, complete cds Length = 2671 Score = 73.8 bits (37), Expect = 8e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 202 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 261 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 2398 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 2339 Query: 262 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 318 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 2338 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 2282 Score = 73.8 bits (37), Expect = 8e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| |||||||| || |||||||| ||||||||||| | |||||| || || |||||| Sbjct: 2221 tccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgata 2162 Query: 436 tcagcaccgctgaacccttgggtgtactt 464 |||||||| ||||| || || |||||||| Sbjct: 2161 tcagcaccactgaatccctgagtgtactt 2133
>emb|Z48334.1|CEF10B5 Caenorhabditis elegans Cosmid F10B5, complete sequence Length = 29132 Score = 73.8 bits (37), Expect = 8e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 547 tcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggtct 606 ||||||||||| |||||||| | |||||| ||||| ||||| | ||| | || || || Sbjct: 1494 tcaggaagaggaatgtagatcaactgatcgagacgtcctggacgaagaacagctggatca 1435 Query: 607 atgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgcca 666 ||||| || || | |||||||| ||||| ||||| ||| ||||||| |||||||| ||| Sbjct: 1434 atgatatcaggacgattggtagctccaataatgaacacgtttttcttggcattcatacca 1375 Query: 667 tccatctcagtcagcagctggttcagcactctatcagcagcacctccagcatc 719 ||||| ||||| || | |||||| | || | ||| ||||||||||||||||| Sbjct: 1374 tccatttcagtgagaacctggttgataacacgatcggcagcacctccagcatc 1322
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 73.8 bits (37), Expect = 8e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 202 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 261 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 24032 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 24091 Query: 262 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 318 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 24092 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 24148 Score = 71.9 bits (36), Expect = 3e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 377 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 436 |||| |||||||| || |||||||| ||||||||||| | |||||| || || ||||||| Sbjct: 24316 ccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgatat 24375 Query: 437 cagcaccgctgaacccttgggtgtactt 464 ||||||| ||||| || || |||||||| Sbjct: 24376 cagcaccactgaatccctgagtgtactt 24403
>gb|BT006485.1| Arabidopsis thaliana At5g03340 gene, complete cds Length = 2433 Score = 73.8 bits (37), Expect = 8e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 202 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 261 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 2303 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 2244 Query: 262 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 318 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 2243 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 2187 Score = 73.8 bits (37), Expect = 8e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| |||||||| || |||||||| ||||||||||| | |||||| || || |||||| Sbjct: 2126 tccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgata 2067 Query: 436 tcagcaccgctgaacccttgggtgtactt 464 |||||||| ||||| || || |||||||| Sbjct: 2066 tcagcaccactgaatccctgagtgtactt 2038
>ref|NM_063304.2| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.2) (cdc-48.2) mRNA, complete cds Length = 2632 Score = 73.8 bits (37), Expect = 8e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 547 tcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggtct 606 ||||||||||| |||||||| | |||||| ||||| ||||| | ||| | || || || Sbjct: 2050 tcaggaagaggaatgtagatcaactgatcgagacgtcctggacgaagaacagctggatca 1991 Query: 607 atgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgcca 666 ||||| || || | |||||||| ||||| ||||| ||| ||||||| |||||||| ||| Sbjct: 1990 atgatatcaggacgattggtagctccaataatgaacacgtttttcttggcattcatacca 1931 Query: 667 tccatctcagtcagcagctggttcagcactctatcagcagcacctccagcatc 719 ||||| ||||| || | |||||| | || | ||| ||||||||||||||||| Sbjct: 1930 tccatttcagtgagaacctggttgataacacgatcggcagcacctccagcatc 1878
>dbj|AK118571.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 Length = 2671 Score = 73.8 bits (37), Expect = 8e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 202 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 261 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 2398 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 2339 Query: 262 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 318 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 2338 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 2282 Score = 73.8 bits (37), Expect = 8e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| |||||||| || |||||||| ||||||||||| | |||||| || || |||||| Sbjct: 2221 tccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgata 2162 Query: 436 tcagcaccgctgaacccttgggtgtactt 464 |||||||| ||||| || || |||||||| Sbjct: 2161 tcagcaccactgaatccctgagtgtactt 2133
>dbj|AK117125.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL16-66-D01 Length = 2664 Score = 73.8 bits (37), Expect = 8e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 202 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 261 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 2391 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 2332 Query: 262 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 318 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 2331 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 2275 Score = 73.8 bits (37), Expect = 8e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 376 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 435 ||||| |||||||| || |||||||| ||||||||||| | |||||| || || |||||| Sbjct: 2214 tccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgata 2155 Query: 436 tcagcaccgctgaacccttgggtgtactt 464 |||||||| ||||| || || |||||||| Sbjct: 2154 tcagcaccactgaatccctgagtgtactt 2126
>ref|NM_201481.1| Danio rerio valosin containing protein (vcp), mRNA Length = 2659 Score = 67.9 bits (34), Expect = 5e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| || || || | ||| || ||||| || | ||||||||| ||||||||| Sbjct: 2031 gggatgtagatgagttggtccaaacgtccgggcctgaggatggcagggtcaatgatgtct 1972 Query: 616 ggcctgttggtagcaccaatgatgaagacg 645 || |||||||| || ||||||||||||||| Sbjct: 1971 ggtctgttggtggccccaatgatgaagacg 1942
>gb|BC067384.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:77072 IMAGE:6960180), complete cds Length = 2635 Score = 67.9 bits (34), Expect = 5e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| || || || | ||| || ||||| || | ||||||||| ||||||||| Sbjct: 2007 gggatgtagatgagttggtccaaacgtccgggcctgaggatggcagggtcaatgatgtct 1948 Query: 616 ggcctgttggtagcaccaatgatgaagacg 645 || |||||||| || ||||||||||||||| Sbjct: 1947 ggtctgttggtggccccaatgatgaagacg 1918
>gb|AY576993.1| Danio rerio clone RK103A4E09 valosin-containing protein mRNA, complete cds Length = 2657 Score = 67.9 bits (34), Expect = 5e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| || || || | ||| || ||||| || | ||||||||| ||||||||| Sbjct: 2068 gggatgtagatgagttggtccaaacgtccgggcctgaggatggcagggtcaatgatgtct 2009 Query: 616 ggcctgttggtagcaccaatgatgaagacg 645 || |||||||| || ||||||||||||||| Sbjct: 2008 ggtctgttggtggccccaatgatgaagacg 1979
>ref|XM_567564.1| Cryptococcus neoformans var. neoformans JEC21 MMS2 (CNJ02750) partial mRNA Length = 2673 Score = 67.9 bits (34), Expect = 5e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||||||||||||||||||||||||||||| | ||||| || ||||| || ||||| ||| Sbjct: 1997 ggcctgttggtagcaccaatgatgaagacgttcttcttcgcgttcataccgtccatttca 1938 Query: 676 gt 677 || Sbjct: 1937 gt 1936 Score = 42.1 bits (21), Expect = 2.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccc 584 ||||||||||| ||||||||||| ||||| Sbjct: 2057 gggatgtagatcagctgatcaagtcgccc 2029
>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5, complete sequence Length = 156543 Score = 67.9 bits (34), Expect = 5e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| || || || | ||| || ||||| || | ||||||||| ||||||||| Sbjct: 149238 gggatgtagatgagttggtccaaacgtccgggcctgaggatggcagggtcaatgatgtct 149297 Query: 616 ggcctgttggtagcaccaatgatgaagacg 645 || |||||||| || ||||||||||||||| Sbjct: 149298 ggtctgttggtggccccaatgatgaagacg 149327
>emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 in linkage group 5, complete sequence Length = 143278 Score = 67.9 bits (34), Expect = 5e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| || || || | ||| || ||||| || | ||||||||| ||||||||| Sbjct: 133444 gggatgtagatgagttggtccaaacgtccaggcctgaggatggcagggtcaatgatgtct 133385 Query: 616 ggcctgttggtagcaccaatgatgaagacg 645 || |||||||| || ||||||||||||||| Sbjct: 133384 ggtctgttggtggccccaatgatgaagacg 133355
>ref|XM_692759.1| PREDICTED: Danio rerio similar to Valosin containing protein (LOC569377), mRNA Length = 1747 Score = 67.9 bits (34), Expect = 5e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| || || || | ||| || ||||| || | ||||||||| ||||||||| Sbjct: 770 gggatgtagatgagttggtccaaacgtccgggcctgaggatggcagggtcaatgatgtct 711 Query: 616 ggcctgttggtagcaccaatgatgaagacg 645 || |||||||| || ||||||||||||||| Sbjct: 710 ggtctgttggtggccccaatgatgaagacg 681
>gb|BC050488.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:56043 IMAGE:3820156), complete cds Length = 2659 Score = 67.9 bits (34), Expect = 5e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| || || || | ||| || ||||| || | ||||||||| ||||||||| Sbjct: 2031 gggatgtagatgagttggtccaaacgtccgggcctgaggatggcagggtcaatgatgtct 1972 Query: 616 ggcctgttggtagcaccaatgatgaagacg 645 || |||||||| || ||||||||||||||| Sbjct: 1971 ggtctgttggtggccccaatgatgaagacg 1942
>ref|XM_428317.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC430766), partial mRNA Length = 1516 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 601 gggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattc 660 ||||| |||||||||||||||||||| ||||| ||||||||||| | ||||| | | Sbjct: 991 gggtcaatgatgtctggcctgttggtggcaccgatgatgaagacattcttcttggtggac 932 Query: 661 atgccatccatctcagtcagcagctggtt 689 |||||||||||||| ||||| | |||||| Sbjct: 931 atgccatccatctctgtcaggatctggtt 903
>ref|XM_424984.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC427410), mRNA Length = 2303 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 601 gggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattc 660 ||||| |||||||||||||||||||||||||| |||||||| ||| | ||||| | | Sbjct: 1930 gggtcaatgatgtctggcctgttggtagcaccgatgatgaaaacgttcttcttggtggac 1871 Query: 661 atgccatccatctcagtcagcagctggtt 689 || ||||||||||| ||||| | |||||| Sbjct: 1870 ataccatccatctctgtcaggatctggtt 1842
>emb|AJ719285.1| Gallus gallus mRNA for hypothetical protein, clone 1c3 Length = 2934 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 601 gggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattc 660 ||||| |||||||||||||||||||||||||| |||||||| ||| | ||||| | | Sbjct: 2044 gggtcaatgatgtctggcctgttggtagcaccgatgatgaaaacgttcttcttggtggac 1985 Query: 661 atgccatccatctcagtcagcagctggtt 689 || ||||||||||| ||||| | |||||| Sbjct: 1984 ataccatccatctctgtcaggatctggtt 1956
>dbj|AB195711.1| Gallus gallus vcp mRNA for valosin containing protein, complete cds Length = 2916 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 601 gggtctatgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattc 660 ||||| |||||||||||||||||||||||||| |||||||| ||| | ||||| | | Sbjct: 1994 gggtcaatgatgtctggcctgttggtagcaccgatgatgaaaacgttcttcttggtggac 1935 Query: 661 atgccatccatctcagtcagcagctggtt 689 || ||||||||||| ||||| | |||||| Sbjct: 1934 ataccatccatctctgtcaggatctggtt 1906
>dbj|AB093594.1| Danio rerio CDC48 mRNA, partial cds Length = 2418 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 597 ggcagggtctatgatgtctggcctgttggtagcaccaatgatgaagacg 645 ||||||||| ||||||||||| |||||||| || ||||||||||||||| Sbjct: 1896 ggcagggtcaatgatgtctggtctgttggtggccccaatgatgaagacg 1848
>ref|XM_631818.1| Dictyostelium discoideum cell division cycle protein 48 (DDB0191154), partial mRNA Length = 2382 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 607 atgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgcca 666 ||||| ||||| || |||||||||||||||||||| ||| | ||||| || ||||| ||| Sbjct: 1880 atgatatctggtctattggtagcaccaatgatgaaaacgttcttcttggcgttcatacca 1821 Query: 667 tccatctcagt 677 ||||| ||||| Sbjct: 1820 tccatttcagt 1810
>gb|BC114306.1| Danio rerio zgc:136908, mRNA (cDNA clone MGC:136908 IMAGE:7993906), complete cds Length = 2707 Score = 61.9 bits (31), Expect = 3e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 547 tcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggtct 606 ||||| |||||||| || ||||||||||| | ||| || ||||| || | |||||| || Sbjct: 2010 tcaggcagagggatataaataagctgatccaaacgaccaggccttagaatggcaggatca 1951 Query: 607 atgatgtctggcctgttggtagcaccaatgatgaagacg 645 ||||| || |||||||| || ||||||||||| |||||| Sbjct: 1950 atgatatcaggcctgttagtggcaccaatgataaagacg 1912
>ref|NM_001039928.1| Danio rerio zgc:136908 (zgc:136908), mRNA Length = 2707 Score = 61.9 bits (31), Expect = 3e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 547 tcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggtct 606 ||||| |||||||| || ||||||||||| | ||| || ||||| || | |||||| || Sbjct: 2010 tcaggcagagggatataaataagctgatccaaacgaccaggccttagaatggcaggatca 1951 Query: 607 atgatgtctggcctgttggtagcaccaatgatgaagacg 645 ||||| || |||||||| || ||||||||||| |||||| Sbjct: 1950 atgatatcaggcctgttagtggcaccaatgataaagacg 1912
>dbj|AB181225.1| Eisenia fetida evcp-1 mRNA for valosin containing protein-1, complete cds Length = 2932 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 607 atgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgcca 666 |||||||| || ||||| || || ||||||||||| ||| | ||||| | |||| ||| Sbjct: 1995 atgatgtcaggtctgttcgtggctccaatgatgaacacgttcttctttgagctcattcca 1936 Query: 667 tccatctcagtcagcagctggtt 689 ||||||||||||||||||||||| Sbjct: 1935 tccatctcagtcagcagctggtt 1913
>gb|U83085.2|DDU83085 Dictyostelium discoideum cell division cycle protein 48 (cdcD) mRNA, complete cds Length = 2517 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 607 atgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgcca 666 ||||| ||||| || |||||||||||||||||||| ||| | ||||| || ||||| ||| Sbjct: 1905 atgatatctggtctattggtagcaccaatgatgaaaacgttcttcttggcgttcatacca 1846 Query: 667 tccatctcagt 677 ||||| ||||| Sbjct: 1845 tccatttcagt 1835
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 616 ggcctgttggtagcaccaatgatgaagacg 645 |||||||||||||||||||||||||||||| Sbjct: 795676 ggcctgttggtagcaccaatgatgaagacg 795647
>gb|BC060518.1| Rattus norvegicus valosin-containing protein, mRNA (cDNA clone MGC:72335 IMAGE:5597843), complete cds Length = 3214 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||||||||| || || || || | ||||| | Sbjct: 2159 catcaggaagtgggatataaatgagctgatcaagacggccaggtcttaggatagcaggat 2100 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||| ||||||||| |||||||| Sbjct: 2099 caatgatgtcaggccggttggtagctccaatgat 2066
>gb|BC049114.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:61308 IMAGE:6810751), complete cds Length = 2876 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2225 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2166 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2165 caatgatgtcaggcctgttggtagctccaatgat 2132
>ref|NM_009503.2| Mus musculus valosin containing protein (Vcp), mRNA Length = 3245 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2206 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2147 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2146 caatgatgtcaggcctgttggtagctccaatgat 2113
>ref|XM_985571.1| PREDICTED: Mus musculus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC675857), mRNA Length = 3257 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2206 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2147 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2146 caatgatgtcaggcctgttggtagctccaatgat 2113
>emb|Z14044.1|MMVALPRO M.musculus mRNA for valosin-containing protein Length = 3143 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2109 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2050 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2049 caatgatgtcaggcctgttggtagctccaatgat 2016
>ref|XM_505319.1| Yarrowia lipolytica CLIB122, YALI0F12155g predicted mRNA Length = 2445 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||| ||||||||| ||||||| ||| ||| | ||||| || ||||| || |||||||| Sbjct: 1916 ggccggttggtagctccaatgacgaacacgttcttcttggcgttcataccgtccatctcg 1857 Query: 676 gtcagcagctggtt 689 |||||||||||||| Sbjct: 1856 gtcagcagctggtt 1843
>dbj|AK149931.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530106G21 product:valosin containing protein, full insert sequence Length = 2803 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2170 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2111 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2110 caatgatgtcaggcctgttggtagctccaatgat 2077
>dbj|AK146109.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530030L06 product:valosin containing protein, full insert sequence Length = 2855 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2172 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2113 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2112 caatgatgtcaggcctgttggtagctccaatgat 2079
>dbj|AK153012.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830114G12 product:valosin containing protein, full insert sequence Length = 2841 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2208 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2149 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2148 caatgatgtcaggcctgttggtagctccaatgat 2115
>dbj|AK151418.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830029K16 product:valosin containing protein, full insert sequence Length = 3210 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2171 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2112 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2111 caatgatgtcaggcctgttggtagctccaatgat 2078
>dbj|AK167794.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730026E20 product:valosin containing protein, full insert sequence Length = 2858 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2225 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2166 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2165 caatgatgtcaggcctgttggtagctccaatgat 2132
>dbj|AK160889.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732413B21 product:valosin containing protein, full insert sequence Length = 2726 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2092 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2033 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2032 caatgatgtcaggcctgttggtagctccaatgat 1999
>dbj|AK153249.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129H23 product:valosin containing protein, full insert sequence Length = 3286 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2248 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2189 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2188 caatgatgtcaggcctgttggtagctccaatgat 2155
>dbj|AK159475.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020M12 product:valosin containing protein, full insert sequence Length = 2859 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2204 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2145 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2144 caatgatgtcaggcctgttggtagctccaatgat 2111
>dbj|AK159509.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420022F22 product:valosin containing protein, full insert sequence Length = 2882 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2249 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2190 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2189 caatgatgtcaggcctgttggtagctccaatgat 2156
>dbj|AK169140.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920083B16 product:valosin containing protein, full insert sequence Length = 2812 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2179 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2120 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2119 caatgatgtcaggcctgttggtagctccaatgat 2086
>dbj|AK151109.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025E07 product:valosin containing protein, full insert sequence Length = 3210 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2171 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2112 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2111 caatgatgtcaggcctgttggtagctccaatgat 2078
>dbj|AK010612.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410030B05 product:transitional endoplasmic reticulum ATPase homolog [Sus scrofa domestica], full insert sequence Length = 1665 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 627 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 568 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 567 caatgatgtcaggcctgttggtagctccaatgat 534
>dbj|AK083821.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130015G23 product:valosin containing protein, full insert sequence Length = 2416 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 1783 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 1724 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 1723 caatgatgtcaggcctgttggtagctccaatgat 1690
>dbj|AK028264.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001E05 product:valosin containing protein, full insert sequence Length = 3245 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2206 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2147 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2146 caatgatgtcaggcctgttggtagctccaatgat 2113
>ref|NG_002295.1| Mus musculus valosin containing protein pseudogene (Vcp-ps) on chromosome X Length = 3607 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2453 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2394 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2393 caatgatgtcaggcctgttggtagctccaatgat 2360
>dbj|AK030751.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730519N02 product:valosin containing protein, full insert sequence Length = 3091 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2108 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2049 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2048 caatgatgtcaggcctgttggtagctccaatgat 2015
>dbj|AK209378.1| Mus musculus cDNA, clone:Y2G0114O17, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 410 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 271 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 212 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 211 caatgatgtcaggcctgttggtagctccaatgat 178
>dbj|AK186028.1| Mus musculus cDNA, clone:Y0G0136A10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 399 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 271 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 212 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 211 caatgatgtcaggcctgttggtagctccaatgat 178
>gb|AF122048.1|AF122048 Mus musculus p97 ATPase pseudogene, complete sequence Length = 3607 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2453 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2394 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2393 caatgatgtcaggcctgttggtagctccaatgat 2360
>gb|U11760.1|RNU11760 Rattus norvegicus transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2870 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||||||||| || || || || | ||||| | Sbjct: 2191 catcaggaagtgggatataaatgagctgatcaagacggccaggtcttaggatagcaggat 2132 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||| ||||||||| |||||||| Sbjct: 2131 caatgatgtcaggccggttggtagctccaatgat 2098
>ref|NM_053864.2| Rattus norvegicus valosin-containing protein (Vcp), mRNA Length = 3214 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||||||||| || || || || | ||||| | Sbjct: 2159 catcaggaagtgggatataaatgagctgatcaagacggccaggtcttaggatagcaggat 2100 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||| ||||||||| |||||||| Sbjct: 2099 caatgatgtcaggccggttggtagctccaatgat 2066
>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence Length = 124230 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 85476 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 85417 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 85416 caatgatgtcaggcctgttggtagctccaatgat 85383
>gb|BC043053.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:57954 IMAGE:6418662), complete cds Length = 2898 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 2181 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 2122 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 2121 caatgatgtcaggcctgttggtagctccaatgat 2088
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||| ||||||||| ||||||| ||| ||| | ||||| || ||||| || |||||||| Sbjct: 1601384 ggccggttggtagctccaatgacgaacacgttcttcttggcgttcataccgtccatctcg 1601443 Query: 676 gtcagcagctggtt 689 |||||||||||||| Sbjct: 1601444 gtcagcagctggtt 1601457
>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete sequence Length = 208030 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 119105 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 119164 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 119165 caatgatgtcaggcctgttggtagctccaatgat 119198
>emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chromosome X, complete sequence Length = 202972 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | ||||| | Sbjct: 122998 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagcaggat 123057 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 123058 caatgatgtcaggcctgttggtagctccaatgat 123091
>emb|BX028305.1|CNS08U05 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42BC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1003 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcg 243 |||||||||||||| ||||||||||| |||||||| | |||||||||||||||| Sbjct: 831 ccgaatccacgagattgctgcagcgtttgggcaaacatttcgtacttgcggatgtcg 887
>emb|BX027063.1|CNS08T1N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40CD02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1007 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcg 243 |||||||||||||| ||||||||||| |||||||| | |||||||||||||||| Sbjct: 838 ccgaatccacgagattgctgcagcgtttgggcaaacatttcgtacttgcggatgtcg 894
>ref|XM_315644.2| Anopheles gambiae str. PEST ENSANGP00000022801 (ENSANGG00000019258), partial mRNA Length = 2559 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcg 243 |||||||||||||| ||||||||||| |||||||| | |||||||||||||||| Sbjct: 2300 ccgaatccacgagattgctgcagcgtttgggcaaacatttcgtacttgcggatgtcg 2244
>ref|XM_482385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2547 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| ||||| || || || || |||| |||| || ||||| |||||||| Sbjct: 1973 gggatgtagatgagctggtcgaggcggcccggccggagcatcgccgggtcgatgatgtcc 1914 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||| |||||| || || |||| ||| || || ||||| || || ||||| |||||||| Sbjct: 1913 ggccggttggtggcgccgatgacgaacaccgtcttcttggcgttgatgccgtccatctcg 1854 Query: 676 gtcagcagctggttcagcac 695 || ||||||||||| ||||| Sbjct: 1853 gtgagcagctggttgagcac 1834
>ref|XM_960868.1| Encephalitozoon cuniculi GB-M1 ATPase (ECU01_1230) partial mRNA Length = 2343 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 664 ccatccatctcagtcagcagctggttcagcactctatcag 703 ||||||||||||| |||||||||||||||| |||||||| Sbjct: 1838 ccatccatctcagatagcagctggttcagcattctatcag 1799
>emb|Z49886.1|CEC06A1 Caenorhabditis elegans Cosmid C06A1, complete sequence Length = 20752 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||||||||||||||| || ||||| | ||| | || || || ||||| || Sbjct: 1903 gggatgtagataagctgatcaaggcgacctggacgaagaacagctggatcaatgatatca 1962 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccat 671 || ||||| ||||| || |||||||| || ||||||| || ||||| |||||||| Sbjct: 1963 ggtctgtttgtagctccgatgatgaacacatttttcttcgcgttcattccatccat 2018
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 209982 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 664 ccatccatctcagtcagcagctggttcagcactctatcag 703 ||||||||||||| |||||||||||||||| |||||||| Sbjct: 147027 ccatccatctcagatagcagctggttcagcattctatcag 147066
>ref|NM_063872.3| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.1) (cdc-48.1) mRNA, complete cds Length = 2762 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||||||||||||||| || ||||| | ||| | || || || ||||| || Sbjct: 1975 gggatgtagataagctgatcaaggcgacctggacgaagaacagctggatcaatgatatca 1916 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccat 671 || ||||| ||||| || |||||||| || ||||||| || ||||| |||||||| Sbjct: 1915 ggtctgtttgtagctccgatgatgaacacatttttcttcgcgttcattccatccat 1860
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| ||||| || || || || |||| |||| || ||||| |||||||| Sbjct: 19750409 gggatgtagatgagctggtcgaggcggcccggccggagcatcgccgggtcgatgatgtcc 19750468 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||| |||||| || || |||| ||| || || ||||| || || ||||| |||||||| Sbjct: 19750469 ggccggttggtggcgccgatgacgaacaccgtcttcttggcgttgatgccgtccatctcg 19750528 Query: 676 gtcagcagctggttcagcac 695 || ||||||||||| ||||| Sbjct: 19750529 gtgagcagctggttgagcac 19750548
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| ||||| || || || || |||| |||| || ||||| |||||||| Sbjct: 79360 gggatgtagatgagctggtcgaggcggcccggccggagcatcgccgggtcgatgatgtcc 79419 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctca 675 |||| |||||| || || |||| ||| || || ||||| || || ||||| |||||||| Sbjct: 79420 ggccggttggtggcgccgatgacgaacaccgtcttcttggcgttgatgccgtccatctcg 79479 Query: 676 gtcagcagctggttcagcac 695 || ||||||||||| ||||| Sbjct: 79480 gtgagcagctggttgagcac 79499
>emb|Z74174.1|SCYDL126C S.cerevisiae chromosome IV reading frame ORF YDL126c Length = 3251 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 613 tctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccat 671 |||||||| ||||| |||||||| | ||| || |||||||||||||||| |||||||| Sbjct: 988 tctggcctattggtggcaccaatcacgaacacatttttcttagcattcataccatccat 1046
>emb|X56956.1|SCCDC48 S. cerevisiae CDC48 gene for cell cycle protein CDC48p Length = 6485 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 613 tctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccat 671 |||||||| ||||| |||||||| | ||| || |||||||||||||||| |||||||| Sbjct: 3885 tctggcctattggtggcaccaatcacgaacacatttttcttagcattcataccatccat 3827
>gb|AC103566.1| Caenorhabditis briggsae cosmid CB024E07, complete sequence Length = 79224 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Plus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||| ||||| || |||||||| |||||||| ||||| ||||| | ||| | || || | Sbjct: 63831 catctggaagtggaatgtagatgagctgatcgagacgtcctggacgaagaacagctggat 63890 Query: 605 ctatgatgtctggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgc 664 | ||||||||||| || ||||| || || ||||||||||| | ||||| || ||||| | Sbjct: 63891 caatgatgtctggtctattggtggctccgatgatgaagacattcttcttcgcgttcattc 63950 Query: 665 catccatctc 674 | |||||||| Sbjct: 63951 cgtccatctc 63960 Score = 48.1 bits (24), Expect = 0.043 Identities = 30/32 (93%) Strand = Plus / Plus Query: 187 ccgaatccacgagactgctgcagcgtctgggc 218 ||||| |||||||||||||| ||||||||||| Sbjct: 63413 ccgaagccacgagactgctggagcgtctgggc 63444
>ref|NM_214280.1| Sus scrofa valosin-containing protein (VCP), mRNA Length = 3147 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaag 578 |||||||||| ||||||||||| ||||||||||| Sbjct: 2120 catcaggaagtgggatgtagatgagctgatcaag 2087
>dbj|AK209215.1| Mus musculus cDNA, clone:Y2G0114F19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 408 Score = 52.0 bits (26), Expect = 0.003 Identities = 77/94 (81%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| | || || || | ||||| | Sbjct: 271 catcaggaagtgggatataaatgagctgatctagacgggcaggtcttaggatagcaggat 212 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 211 caatgatgtcaggcctgttggtagctccaatgat 178
>dbj|AK207257.1| Mus musculus cDNA, clone:Y2G0107G23, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 396 Score = 52.0 bits (26), Expect = 0.003 Identities = 77/94 (81%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaagacgccctggcctaagcagggcagggt 604 |||||||||| ||||| || || |||||||| ||||| || || || || | || || | Sbjct: 110 catcaggaagtgggatataaatgagctgatctagacggccaggtcttaggatagctggat 51 Query: 605 ctatgatgtctggcctgttggtagcaccaatgat 638 | |||||||| |||||||||||||| |||||||| Sbjct: 50 caatgatgtcaggcctgttggtagctccaatgat 17
>gb|AY609417.1| Sus scrofa clone Clu_1080.scr.msk.p1.Contig5, mRNA sequence Length = 3968 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaag 578 |||||||||| ||||||||||| ||||||||||| Sbjct: 2126 catcaggaagtgggatgtagatgagctgatcaag 2093
>gb|M30143.1|PIGVALA Pig valosin-containing protein (VCP) mRNA, complete cds Length = 3147 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 545 catcaggaagagggatgtagataagctgatcaag 578 |||||||||| ||||||||||| ||||||||||| Sbjct: 2120 catcaggaagtgggatgtagatgagctgatcaag 2087
>gb|BC074716.1| Xenopus tropicalis valosin-containing protein, mRNA (cDNA clone MGC:69484 IMAGE:5336248), complete cds Length = 3258 Score = 50.1 bits (25), Expect = 0.011 Identities = 31/33 (93%) Strand = Plus / Minus Query: 613 tctggcctgttggtagcaccaatgatgaagacg 645 |||||||||||||| || ||||||||||||||| Sbjct: 1993 tctggcctgttggtggctccaatgatgaagacg 1961
>ref|XM_752110.1| Ustilago maydis 521 hypothetical protein (UM01056.1) partial mRNA Length = 2469 Score = 50.1 bits (25), Expect = 0.011 Identities = 25/25 (100%) Strand = Plus / Minus Query: 621 gttggtagcaccaatgatgaagacg 645 ||||||||||||||||||||||||| Sbjct: 1869 gttggtagcaccaatgatgaagacg 1845
>gb|BC044980.1| Xenopus laevis hypothetical protein MGC52979, mRNA (cDNA clone MGC:52979 IMAGE:4930716), complete cds Length = 4033 Score = 50.1 bits (25), Expect = 0.011 Identities = 25/25 (100%) Strand = Plus / Minus Query: 667 tccatctcagtcagcagctggttca 691 ||||||||||||||||||||||||| Sbjct: 2161 tccatctcagtcagcagctggttca 2137
>ref|NM_001005677.1| Xenopus tropicalis valosin-containing protein (vcp), mRNA Length = 3258 Score = 50.1 bits (25), Expect = 0.011 Identities = 31/33 (93%) Strand = Plus / Minus Query: 613 tctggcctgttggtagcaccaatgatgaagacg 645 |||||||||||||| || ||||||||||||||| Sbjct: 1993 tctggcctgttggtggctccaatgatgaagacg 1961
>ref|XM_752342.1| Ustilago maydis 521 hypothetical protein (UM01288.1) partial mRNA Length = 2853 Score = 48.1 bits (24), Expect = 0.043 Identities = 24/24 (100%) Strand = Plus / Minus Query: 320 cctcgtcctcctccatcgcttcag 343 |||||||||||||||||||||||| Sbjct: 1975 cctcgtcctcctccatcgcttcag 1952
>ref|XM_415006.1| PREDICTED: Gallus gallus similar to Peroxisome assembly factor-2 (PAF-2) (Peroxisomal-type ATPase 1) (Peroxin-6) (LOC416709), mRNA Length = 2701 Score = 46.1 bits (23), Expect = 0.17 Identities = 47/55 (85%) Strand = Plus / Minus Query: 583 cctggcctaagcagggcagggtctatgatgtctggcctgttggtagcaccaatga 637 |||||||| ||||| || ||||| | || ||| |||||||||||||| ||||||| Sbjct: 1910 cctggcctgagcagagctgggtccaggaggtcaggcctgttggtagctccaatga 1856
>gb|DQ443348.1| Bombyx mori transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2760 Score = 46.1 bits (23), Expect = 0.17 Identities = 95/119 (79%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| ||||| || ||||| || || | || | ||| ||||| |||||||| Sbjct: 2044 gggatgtagatgagctggtccagacggccgggacgcaggatggccgggtcgatgatgtcc 1985 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctc 674 || ||||| || ||||| |||||||||||| | ||||| || |||||| |||||||| Sbjct: 1984 ggtctgtttgtggcaccgatgatgaagacgttcttcttggcgcccatgccgtccatctc 1926
>ref|NM_165726.1| Drosophila melanogaster TER94 CG2331-RB, transcript variant B (TER94), mRNA Length = 1458 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaa 221 ||||||||||| |||||||||| ||||||||||| Sbjct: 862 ccgaatccacgggactgctgcaaagtctgggcaaa 828
>dbj|AB244027.1| Bombyx mori ter94 mRNA for transitional endoplasmic reticulum ATPase TER94, complete cds Length = 2721 Score = 46.1 bits (23), Expect = 0.17 Identities = 95/119 (79%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| ||||| || ||||| || || | || | ||| ||||| |||||||| Sbjct: 2019 gggatgtagatgagctggtccagacggccgggacgcaggatggccgggtcgatgatgtcc 1960 Query: 616 ggcctgttggtagcaccaatgatgaagacggttttcttagcattcatgccatccatctc 674 || ||||| || ||||| |||||||||||| | ||||| || |||||| |||||||| Sbjct: 1959 ggtctgtttgtggcaccgatgatgaagacgttcttcttggcgcccatgccgtccatctc 1901
>ref|NM_058021.3| Drosophila melanogaster TER94 CG2331-RA, transcript variant A (TER94), mRNA Length = 3018 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaa 221 ||||||||||| |||||||||| ||||||||||| Sbjct: 2426 ccgaatccacgggactgctgcaaagtctgggcaaa 2392
>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR06J01, complete sequence Length = 172904 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaa 221 ||||||||||| |||||||||| ||||||||||| Sbjct: 47748 ccgaatccacgggactgctgcaaagtctgggcaaa 47714
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 46.1 bits (23), Expect = 0.17 Identities = 41/47 (87%) Strand = Plus / Minus Query: 568 agctgatcaagacgccctggcctaagcagggcagggtctatgatgtc 614 |||| ||||| |||||| || || ||||||||||||||||| ||||| Sbjct: 2231756 agctcatcaaaacgcccgggtctgagcagggcagggtctattatgtc 2231710
>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR01L01, complete sequence Length = 160301 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaa 221 ||||||||||| |||||||||| ||||||||||| Sbjct: 159195 ccgaatccacgggactgctgcaaagtctgggcaaa 159161
>gb|AY190939.1| Drosophila erecta clone DERF01_42_I03 (D1420) genomic sequence Length = 45909 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaa 221 ||||||||||| |||||||||| ||||||||||| Sbjct: 39169 ccgaatccacgggactgctgcaaagtctgggcaaa 39135
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaa 221 ||||||||||| |||||||||| ||||||||||| Sbjct: 145041 ccgaatccacgggactgctgcaaagtctgggcaaa 145007
>gb|BT001521.1| Drosophila melanogaster LP12034 full insert cDNA Length = 1473 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaa 221 ||||||||||| |||||||||| ||||||||||| Sbjct: 863 ccgaatccacgggactgctgcaaagtctgggcaaa 829
>gb|AF047037.1|AF047037 Drosophila melanogaster transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2550 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaa 221 ||||||||||| |||||||||| ||||||||||| Sbjct: 2367 ccgaatccacgggactgctgcaaagtctgggcaaa 2333
>gb|AF132553.1| Drosophila melanogaster BcDNA.GM02885 (BcDNA.GM02885) mRNA, complete cds Length = 3018 Score = 46.1 bits (23), Expect = 0.17 Identities = 32/35 (91%) Strand = Plus / Minus Query: 187 ccgaatccacgagactgctgcagcgtctgggcaaa 221 ||||||||||| |||||||||| ||||||||||| Sbjct: 2410 ccgaatccacgggactgctgcaaagtctgggcaaa 2376
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Minus Query: 664 ccatccatctcagtcagcagctggtt 689 |||||||||||||| ||||||||||| Sbjct: 892591 ccatccatctcagtgagcagctggtt 892566 Score = 44.1 bits (22), Expect = 0.67 Identities = 28/30 (93%) Strand = Plus / Minus Query: 664 ccatccatctcagtcagcagctggttcagc 693 ||||||||||| ||||| |||||||||||| Sbjct: 305151 ccatccatctccgtcaggagctggttcagc 305122
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Plus Query: 664 ccatccatctcagtcagcagctggtt 689 ||||||||||||||||| |||||||| Sbjct: 1952242 ccatccatctcagtcaggagctggtt 1952267
>ref|NM_001031502.1| Gallus gallus DnaJ (Hsp40) homolog, subfamily C, member 7 (DNAJC7), mRNA Length = 5522 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 ggcagaggcagcgcccgcagcc 159 |||||||||||||||||||||| Sbjct: 4912 ggcagaggcagcgcccgcagcc 4891
>ref|XM_472796.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1755 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Minus Query: 664 ccatccatctcagtcagcagctggtt 689 |||||||||||||| ||||||||||| Sbjct: 1277 ccatccatctcagtaagcagctggtt 1252
>gb|AY606032.1| Oncorhynchus mykiss valosin containing protein mRNA, complete cds Length = 2681 Score = 44.1 bits (22), Expect = 0.67 Identities = 73/90 (81%) Strand = Plus / Minus Query: 556 gggatgtagataagctgatcaagacgccctggcctaagcagggcagggtctatgatgtct 615 ||||||||||| ||||| || || | || ||||| || | ||| ||||| ||||| || Sbjct: 1780 gggatgtagatgagctggtccagtctgccgggcctcaggatggccgggtcgatgatatca 1721 Query: 616 ggcctgttggtagcaccaatgatgaagacg 645 ||||||||||| || || |||||||||||| Sbjct: 1720 ggcctgttggtggcgccgatgatgaagacg 1691
>emb|AJ851525.1| Gallus gallus mRNA for hypothetical protein, clone 4m5 Length = 5522 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 ggcagaggcagcgcccgcagcc 159 |||||||||||||||||||||| Sbjct: 4912 ggcagaggcagcgcccgcagcc 4891
>emb|CR387484.1| Gallus gallus finished cDNA, clone ChEST490i16 Length = 872 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 ggcagaggcagcgcccgcagcc 159 |||||||||||||||||||||| Sbjct: 519 ggcagaggcagcgcccgcagcc 498
>dbj|AK064543.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-A09, full insert sequence Length = 2112 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Minus Query: 664 ccatccatctcagtcagcagctggtt 689 |||||||||||||| ||||||||||| Sbjct: 49 ccatccatctcagtaagcagctggtt 24
>ref|XM_429532.1| PREDICTED: Gallus gallus LOC417817 (LOC417817), mRNA Length = 1393 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 cctccgcctctccctctcgatgtcc 378 ||||||||||||||||||| ||||| Sbjct: 516 cctccgcctctccctctcgctgtcc 492
>ref|XM_329540.1| Neurospora crassa OR74A hypothetical protein (NCU08496.1) partial mRNA Length = 3873 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 cttcctccgcctctccctctc 371 ||||||||||||||||||||| Sbjct: 173 cttcctccgcctctccctctc 193
>ref|XM_958332.1| Neurospora crassa OR74A hypothetical protein (NCU08496.1) partial mRNA Length = 3873 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 cttcctccgcctctccctctc 371 ||||||||||||||||||||| Sbjct: 173 cttcctccgcctctccctctc 193
>ref|XM_386072.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05896.1) partial mRNA Length = 1653 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 629 caccaatgatgaagacggttttctt 653 |||| |||||||||||||||||||| Sbjct: 1389 caccgatgatgaagacggttttctt 1413
>emb|AL390066.5| Human DNA sequence from clone RP5-1086K13 on chromosome 1 Contains the 5' end of a novel gene, the 3' end of a novel gene, the 3' end of the CD58 gene for CD58 antigen (lymphocyte function-associated antigen 3), a novel gene and the 3' end of a nucleosome assembly protein 1-like 4 (NAP1L4) pseudogene, complete sequence Length = 103611 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 ttcagggttgtccttcctccg 359 ||||||||||||||||||||| Sbjct: 34751 ttcagggttgtccttcctccg 34731
>ref|XM_789562.1| PREDICTED: Strongylocentrotus purpuratus similar to CG14788-PA (LOC589934), mRNA Length = 2091 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 312 ctcatcaacctcgtcctcctccatc 336 |||||||||||| |||||||||||| Sbjct: 1086 ctcatcaacctcatcctcctccatc 1062
>emb|BX014465.1|CNS08JBP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA21DA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 957 Score = 42.1 bits (21), Expect = 2.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 661 atgccatccatctcagtcagcagctggtt 689 ||||| |||||||| |||||||||||||| Sbjct: 645 atgccgtccatctccgtcagcagctggtt 673
>emb|BX014464.1|CNS08JBO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21DA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1003 Score = 42.1 bits (21), Expect = 2.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 661 atgccatccatctcagtcagcagctggtt 689 ||||| |||||||| |||||||||||||| Sbjct: 837 atgccgtccatctccgtcagcagctggtt 809
>gb|AY268943.1| Tetrahymena thermophila strain Cu428 Brg1p (BRG1) mRNA, complete cds Length = 4304 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 tttaactatataaatcatcatcatc 98 ||||||| ||||||||||||||||| Sbjct: 3810 tttaactctataaatcatcatcatc 3786
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caagctttgaagatctggtgc 534 ||||||||||||||||||||| Sbjct: 3397604 caagctttgaagatctggtgc 3397624
>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7 Length = 95637 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 cttcctccgcctctccctctc 371 ||||||||||||||||||||| Sbjct: 11169 cttcctccgcctctccctctc 11189
>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22 Length = 73803 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 cttcctccgcctctccctctc 371 ||||||||||||||||||||| Sbjct: 32871 cttcctccgcctctccctctc 32851
>gb|AC061961.6| Homo sapiens chromosome 2, clone RP11-754B23, complete sequence Length = 91734 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 696 tctatcagcagcacctccagc 716 ||||||||||||||||||||| Sbjct: 44758 tctatcagcagcacctccagc 44738
>ref|XM_316268.2| Anopheles gambiae str. PEST ENSANGP00000020514 (ENSANGG00000018025), mRNA Length = 1456 Score = 42.1 bits (21), Expect = 2.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 661 atgccatccatctcagtcagcagctggtt 689 ||||| |||||||| |||||||||||||| Sbjct: 836 atgccgtccatctccgtcagcagctggtt 808
>ref|XM_316139.2| Anopheles gambiae str. PEST ENSANGP00000020353 (ENSANGG00000017864), partial mRNA Length = 4518 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 gcagccggctggtcagcgaaccgga 178 |||||||| |||||||||||||||| Sbjct: 4369 gcagccggttggtcagcgaaccgga 4345
>emb|AL512357.4|CNS07EF6 Human chromosome 14 DNA sequence BAC R-260M19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174612 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 700 tcagcagcacctccagcatccccac 724 |||||| |||||||||||||||||| Sbjct: 49591 tcagcaccacctccagcatccccac 49615
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 42.1 bits (21), Expect = 2.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 667 tccatctcagtcagcagctggttcagcac 695 |||||||||||||| |||||||| ||||| Sbjct: 1889425 tccatctcagtcagaagctggttgagcac 1889397
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 42.1 bits (21), Expect = 2.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 568 agctgatcaagacgccctggcctaagcagggcagggtctat 608 |||| ||||| |||||| ||||| || |||||||||||||| Sbjct: 330659 agctcatcaaaacgcccaggcctgagaagggcagggtctat 330699
>emb|CT033065.1| Platynereis dumerilii EST IB0AAA27BE08EM1 Length = 895 Score = 42.1 bits (21), Expect = 2.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 597 ggcagggtctatgatgtctggcctgttggtagcaccaatgatgaa 641 ||||||||| |||||||| || ||||| || || ||||||||||| Sbjct: 850 ggcagggtcaatgatgtcaggtctgtttgtggctccaatgatgaa 806 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,628,114 Number of Sequences: 3902068 Number of extensions: 6628114 Number of successful extensions: 128456 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127530 Number of HSP's gapped (non-prelim): 872 length of query: 766 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 743 effective length of database: 17,143,297,704 effective search space: 12737470194072 effective search space used: 12737470194072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
