ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags1p15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016342.1| Zea mays clone Contig175 mRNA sequence Length = 1335 Score = 381 bits (192), Expect = e-102 Identities = 282/312 (90%) Strand = Plus / Minus Query: 350 atcaagcaacaggttgcaattcttcagtaagttgaccctggaaaagggtgtcatatctca 409 ||||||||||||| |||||| |||||| || ||| |||||| ||||||||||||||| Sbjct: 1191 atcaagcaacaggctgcaatccttcagcaacagaaccttggaaatgggtgtcatatctca 1132 Query: 410 agctccttgtgacatcaaagaaatgtgctacggcttcttctggtgtttgctgaagaacac 469 ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| |||| Sbjct: 1131 agctccttgtgacatcaaagaaatgtgctacagcttcttcgggtgttttctgaagtacac 1072 Query: 470 catggcccaagttaagtatatgacctttcgggccagctgatttcacaaccctatggattt 529 | |||||||||||||||||||||||||| | ||||||| ||||||||||||| | |||| Sbjct: 1071 cgtggcccaagttaagtatatgaccttttgtaccagctgctttcacaaccctacgaattt 1012 Query: 530 catcagtcaatactggtaatggtgaaaatagatatgctgggtccacattcccttgtacac 589 ||||||||| ||||||||||||||| || ||| ||||||| ||||||||||||||||||| Sbjct: 1011 catcagtcagtactggtaatggtgagaacagaaatgctggatccacattcccttgtacac 952 Query: 590 taattccatcaccaatgcgcctccttccatctgccatatccactgtccagtcaagcccaa 649 ||||||||| ||||| |||| |||||||||| ||||| |||||||||||||||||||||| Sbjct: 951 taattccattaccaaggcgcttccttccatcagccatgtccactgtccagtcaagcccaa 892 Query: 650 taacatcaactc 661 |||||||||||| Sbjct: 891 taacatcaactc 880
>gb|BT016651.1| Zea mays clone Contig484 mRNA sequence Length = 1596 Score = 357 bits (180), Expect = 3e-95 Identities = 279/312 (89%) Strand = Plus / Minus Query: 351 tcaagcaacaggttgcaattcttcagtaagttgaccctggaaaagggtgtcatatctcaa 410 ||||||||| | ||||||||||||| || ||| ||||||||||||||||||||||| Sbjct: 1299 tcaagcaacgtgatgcaattcttcagcaacagaaccttggaaaagggtgtcatatctcaa 1240 Query: 411 gctccttgtgacatcaaagaaatgtgctacggcttcttctggtgtttgctgaagaacacc 470 || ||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||||| Sbjct: 1239 gcgccttgtgacatcaaagaaatgtgctacagcttcttcgggtgttttctgaagtacacc 1180 Query: 471 atggcccaagttaagtatatgacctttcgggccagctgatttcacaaccctatggatttc 530 |||||||| ||||||||||||||||| || ||||||| ||||||||||||||| ||||| Sbjct: 1179 atggcccagattaagtatatgaccttttggaccagctgctttcacaaccctatgaatttc 1120 Query: 531 atcagtcaatactggtaatggtgaaaatagatatgctgggtccacattcccttgtacact 590 |||||||| | ||||||||||||| || | | ||||||| |||||||||||||||||||| Sbjct: 1119 atcagtcagtgctggtaatggtgagaacaaaaatgctggatccacattcccttgtacact 1060 Query: 591 aattccatcaccaatgcgcctccttccatctgccatatccactgtccagtcaagcccaat 650 ||| |||| ||||| ||||||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 1059 aatgccattaccaaggcgcctccttccatcagtcatgtccactgtccagtcaagcccaat 1000 Query: 651 aacatcaactcc 662 |||||||||||| Sbjct: 999 aacatcaactcc 988
>ref|NM_192856.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 Score = 331 bits (167), Expect = 2e-87 Identities = 248/275 (90%) Strand = Plus / Minus Query: 388 tggaaaagggtgtcatatctcaagctccttgtgacatcaaagaaatgtgctacggcttct 447 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 1172 tggaaaagtgtgtcatatctcaagctcctcgtgacatcaaagaaatgagctacagcttct 1113 Query: 448 tctggtgtttgctgaagaacaccatggcccaagttaagtatatgacctttcgggccagct 507 |||||||||| ||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 1112 tctggtgtttttacaagaacaccatggcccaagtttagtatatgaccttttggaccagct 1053 Query: 508 gatttcacaaccctatggatttcatcagtcaatactggtaatggtgaaaatagatatgct 567 ||||| ||||||||||| |||||||| |||| |||||||||||| ||||||||| ||||| Sbjct: 1052 gatttgacaaccctatgaatttcatcggtcagtactggtaatggagaaaatagaaatgct 993 Query: 568 gggtccacattcccttgtacactaattccatcaccaatgcgcctccttccatctgccata 627 ||||| |||||||| |||||||||||| | ||||| ||| |||||||||||||||||| Sbjct: 992 gggtcaacattcccctgtacactaattttgttaccaaggcgtctccttccatctgccata 933 Query: 628 tccactgtccagtcaagcccaataacatcaactcc 662 ||||||||||||||||| ||||||||||| ||||| Sbjct: 932 tccactgtccagtcaagaccaataacatcgactcc 898
>dbj|AK106203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-F10, full insert sequence Length = 1541 Score = 331 bits (167), Expect = 2e-87 Identities = 248/275 (90%) Strand = Plus / Minus Query: 388 tggaaaagggtgtcatatctcaagctccttgtgacatcaaagaaatgtgctacggcttct 447 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 1234 tggaaaagtgtgtcatatctcaagctcctcgtgacatcaaagaaatgagctacagcttct 1175 Query: 448 tctggtgtttgctgaagaacaccatggcccaagttaagtatatgacctttcgggccagct 507 |||||||||| ||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 1174 tctggtgtttttacaagaacaccatggcccaagtttagtatatgaccttttggaccagct 1115 Query: 508 gatttcacaaccctatggatttcatcagtcaatactggtaatggtgaaaatagatatgct 567 ||||| ||||||||||| |||||||| |||| |||||||||||| ||||||||| ||||| Sbjct: 1114 gatttgacaaccctatgaatttcatcggtcagtactggtaatggagaaaatagaaatgct 1055 Query: 568 gggtccacattcccttgtacactaattccatcaccaatgcgcctccttccatctgccata 627 ||||| |||||||| |||||||||||| | ||||| ||| |||||||||||||||||| Sbjct: 1054 gggtcaacattcccctgtacactaattttgttaccaaggcgtctccttccatctgccata 995 Query: 628 tccactgtccagtcaagcccaataacatcaactcc 662 ||||||||||||||||| ||||||||||| ||||| Sbjct: 994 tccactgtccagtcaagaccaataacatcgactcc 960
>dbj|AK099135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047E18, full insert sequence Length = 1523 Score = 331 bits (167), Expect = 2e-87 Identities = 248/275 (90%) Strand = Plus / Minus Query: 388 tggaaaagggtgtcatatctcaagctccttgtgacatcaaagaaatgtgctacggcttct 447 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 1233 tggaaaagtgtgtcatatctcaagctcctcgtgacatcaaagaaatgagctacagcttct 1174 Query: 448 tctggtgtttgctgaagaacaccatggcccaagttaagtatatgacctttcgggccagct 507 |||||||||| ||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 1173 tctggtgtttttacaagaacaccatggcccaagtttagtatatgaccttttggaccagct 1114 Query: 508 gatttcacaaccctatggatttcatcagtcaatactggtaatggtgaaaatagatatgct 567 ||||| ||||||||||| |||||||| |||| |||||||||||| ||||||||| ||||| Sbjct: 1113 gatttgacaaccctatgaatttcatcggtcagtactggtaatggagaaaatagaaatgct 1054 Query: 568 gggtccacattcccttgtacactaattccatcaccaatgcgcctccttccatctgccata 627 ||||| |||||||| |||||||||||| | ||||| ||| |||||||||||||||||| Sbjct: 1053 gggtcaacattcccctgtacactaattttgttaccaaggcgtctccttccatctgccata 994 Query: 628 tccactgtccagtcaagcccaataacatcaactcc 662 ||||||||||||||||| ||||||||||| ||||| Sbjct: 993 tccactgtccagtcaagaccaataacatcgactcc 959
>dbj|AK072290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018J01, full insert sequence Length = 1525 Score = 331 bits (167), Expect = 2e-87 Identities = 248/275 (90%) Strand = Plus / Minus Query: 388 tggaaaagggtgtcatatctcaagctccttgtgacatcaaagaaatgtgctacggcttct 447 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 1235 tggaaaagtgtgtcatatctcaagctcctcgtgacatcaaagaaatgagctacagcttct 1176 Query: 448 tctggtgtttgctgaagaacaccatggcccaagttaagtatatgacctttcgggccagct 507 |||||||||| ||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 1175 tctggtgtttttacaagaacaccatggcccaagtttagtatatgaccttttggaccagct 1116 Query: 508 gatttcacaaccctatggatttcatcagtcaatactggtaatggtgaaaatagatatgct 567 ||||| ||||||||||| |||||||| |||| |||||||||||| ||||||||| ||||| Sbjct: 1115 gatttgacaaccctatgaatttcatcggtcagtactggtaatggagaaaatagaaatgct 1056 Query: 568 gggtccacattcccttgtacactaattccatcaccaatgcgcctccttccatctgccata 627 ||||| |||||||| |||||||||||| | ||||| ||| |||||||||||||||||| Sbjct: 1055 gggtcaacattcccctgtacactaattttgttaccaaggcgtctccttccatctgccata 996 Query: 628 tccactgtccagtcaagcccaataacatcaactcc 662 ||||||||||||||||| ||||||||||| ||||| Sbjct: 995 tccactgtccagtcaagaccaataacatcgactcc 961
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 170 bits (86), Expect = 4e-39 Identities = 122/134 (91%) Strand = Plus / Plus Query: 388 tggaaaagggtgtcatatctcaagctccttgtgacatcaaagaaatgtgctacggcttct 447 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 24820416 tggaaaagtgtgtcatatctcaagctcctcgtgacatcaaagaaatgagctacagcttct 24820475 Query: 448 tctggtgtttgctgaagaacaccatggcccaagttaagtatatgacctttcgggccagct 507 |||||||||| ||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 24820476 tctggtgtttttacaagaacaccatggcccaagtttagtatatgaccttttggaccagct 24820535 Query: 508 gatttcacaaccct 521 ||||| |||||||| Sbjct: 24820536 gatttgacaaccct 24820549 Score = 167 bits (84), Expect = 6e-38 Identities = 129/144 (89%) Strand = Plus / Plus Query: 519 cctatggatttcatcagtcaatactggtaatggtgaaaatagatatgctgggtccacatt 578 |||||| |||||||| |||| |||||||||||| ||||||||| |||||||||| ||||| Sbjct: 24821475 cctatgaatttcatcggtcagtactggtaatggagaaaatagaaatgctgggtcaacatt 24821534 Query: 579 cccttgtacactaattccatcaccaatgcgcctccttccatctgccatatccactgtcca 638 ||| |||||||||||| | ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 24821535 cccctgtacactaattttgttaccaaggcgtctccttccatctgccatatccactgtcca 24821594 Query: 639 gtcaagcccaataacatcaactcc 662 |||||| ||||||||||| ||||| Sbjct: 24821595 gtcaagaccaataacatcgactcc 24821618
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 170 bits (86), Expect = 4e-39 Identities = 122/134 (91%) Strand = Plus / Plus Query: 388 tggaaaagggtgtcatatctcaagctccttgtgacatcaaagaaatgtgctacggcttct 447 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 43536 tggaaaagtgtgtcatatctcaagctcctcgtgacatcaaagaaatgagctacagcttct 43595 Query: 448 tctggtgtttgctgaagaacaccatggcccaagttaagtatatgacctttcgggccagct 507 |||||||||| ||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 43596 tctggtgtttttacaagaacaccatggcccaagtttagtatatgaccttttggaccagct 43655 Query: 508 gatttcacaaccct 521 ||||| |||||||| Sbjct: 43656 gatttgacaaccct 43669 Score = 167 bits (84), Expect = 6e-38 Identities = 129/144 (89%) Strand = Plus / Plus Query: 519 cctatggatttcatcagtcaatactggtaatggtgaaaatagatatgctgggtccacatt 578 |||||| |||||||| |||| |||||||||||| ||||||||| |||||||||| ||||| Sbjct: 44595 cctatgaatttcatcggtcagtactggtaatggagaaaatagaaatgctgggtcaacatt 44654 Query: 579 cccttgtacactaattccatcaccaatgcgcctccttccatctgccatatccactgtcca 638 ||| |||||||||||| | ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 44655 cccctgtacactaattttgttaccaaggcgtctccttccatctgccatatccactgtcca 44714 Query: 639 gtcaagcccaataacatcaactcc 662 |||||| ||||||||||| ||||| Sbjct: 44715 gtcaagaccaataacatcgactcc 44738
>gb|AC119409.25| Medicago truncatula clone mth2-10i9, complete sequence Length = 127954 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 616 ccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 81771 ccatcagccatatccactgtccagtcaagtccaataacatcaactcc 81817 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 407 tcaagctccttgtgacatcaaagaaatgtgctacggcttcttctggtgt 455 |||||||||| | ||| ||||||||||||||||| |||||||| ||||| Sbjct: 80787 tcaagctcctcgcgacgtcaaagaaatgtgctacagcttcttcaggtgt 80835
>ref|NM_202587.1| Arabidopsis thaliana uroporphyrinogen decarboxylase AT3G14930 transcript variant AT3G14930.3 mRNA, complete cds Length = 1645 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 1080 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 1025 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1263 tcaaagaaatgagccacggcttcctctggtgt 1232
>ref|NM_180256.1| Arabidopsis thaliana uroporphyrinogen decarboxylase AT3G14930 transcript variant AT3G14930.2 mRNA, complete cds Length = 1715 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 1097 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 1042 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1280 tcaaagaaatgagccacggcttcctctggtgt 1249
>ref|NM_112355.2| Arabidopsis thaliana uroporphyrinogen decarboxylase AT3G14930 transcript variant AT3G14930.1 mRNA, complete cds Length = 1662 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 1097 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 1042 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1280 tcaaagaaatgagccacggcttcctctggtgt 1249
>gb|BT008826.1| Arabidopsis thaliana At3g14930 mRNA, complete cds Length = 1026 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 761 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 706 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 944 tcaaagaaatgagccacggcttcctctggtgt 913
>gb|AY136476.1| Arabidopsis thaliana putative uroporphyrinogen decarboxylase (At3g14930) mRNA, complete cds Length = 1602 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 990 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 935 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1173 tcaaagaaatgagccacggcttcctctggtgt 1142
>gb|AY057663.1| Arabidopsis thaliana AT3g14930/K15M2_7 mRNA, complete cds Length = 1568 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 1038 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 983 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1221 tcaaagaaatgagccacggcttcctctggtgt 1190
>emb|BX823278.1|CNS0A7CJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1689 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 1079 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 1024 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1262 tcaaagaaatgagccacggcttcctctggtgt 1231
>emb|BX824829.1|CNS0A5M9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1585 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 1031 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 976 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1214 tcaaagaaatgagccacggcttcctctggtgt 1183
>emb|BX823993.1|CNS0A5LV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1536 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 1041 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 986 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1224 tcaaagaaatgagccacggcttcctctggtgt 1193
>emb|BX824686.1|CNS0A5IS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1542 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaa 658 |||||||||||||| |||||||| || ||||||||||| ||||||||||||| Sbjct: 1059 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcaa 1008 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1245 tcaaagaaatgagccacggcttcctctggtgt 1214
>emb|BX823349.1|CNS0A5DG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1578 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 1067 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 1012 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 1250 tcaaagaaatgagccacggcttcctctggtgt 1219
>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2 Length = 79279 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 607 cgcctccttccatctgccatatccactgtccagtcaagcccaataacatcaactcc 662 |||||||||||||| |||||||| || ||||||||||| |||||||||||| |||| Sbjct: 18260 cgcctccttccatcagccatatctacagtccagtcaagtccaataacatcagctcc 18205 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 424 tcaaagaaatgtgctacggcttcttctggtgt 455 ||||||||||| || |||||||| |||||||| Sbjct: 18527 tcaaagaaatgagccacggcttcctctggtgt 18496
>gb|AC068911.38| Mus musculus strain 129/Sv chromosome 2 clone ct7-161k20, complete sequence Length = 158450 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 ||||||||||||||||||||||||| Sbjct: 32223 gagttgatttggccatggtgtctct 32199
>gb|AC023385.10| Homo sapiens chromosome 8, clone RP11-675P19, complete sequence Length = 167118 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 187 gaatgactgaaatacacagatgca 210 |||||||||||||||||||||||| Sbjct: 131342 gaatgactgaaatacacagatgca 131319
>gb|AC079200.6| Homo sapiens chromosome 8, clone RP11-1058B24, complete sequence Length = 117978 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 187 gaatgactgaaatacacagatgca 210 |||||||||||||||||||||||| Sbjct: 106795 gaatgactgaaatacacagatgca 106818
>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds, alternatively spliced Length = 379048 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 187 gaatgactgaaatacacagatgca 210 |||||||||||||||||||||||| Sbjct: 127221 gaatgactgaaatacacagatgca 127198
>gb|AC147380.2| Mus musculus BAC clone RP24-119J10 from chromosome 17, complete sequence Length = 156475 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 tgagttgatttggccatggtgtctct 249 ||||||| |||||||||||||||||| Sbjct: 60182 tgagttgctttggccatggtgtctct 60157
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 436 gctacggcttcttctggtgttt 457 |||||||||||||||||||||| Sbjct: 1400032 gctacggcttcttctggtgttt 1400053
>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete sequence Length = 205589 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 tttggccatggtgtctctacaa 253 |||||||||||||||||||||| Sbjct: 31248 tttggccatggtgtctctacaa 31269
>gb|AC163629.5| Mus musculus BAC clone RP24-542G7 from chromosome 17, complete sequence Length = 198902 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 agttgatttggccatggtgtct 247 |||||||||||||||||||||| Sbjct: 100056 agttgatttggccatggtgtct 100035
>gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170561 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 ||||||| ||||||||||||||||| Sbjct: 121969 gagttgacttggccatggtgtctct 121993
>ref|NM_001012341.1| Ovis aries uroporphyrinogen decarboxylase (urod), mRNA Length = 1192 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 873 ccactgtccagtcaagcccaa 853
>gb|AC161807.12| Mus musculus chromosome 1, clone RP24-229G16, complete sequence Length = 144324 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||||| |||||||||||||||| Sbjct: 132647 gagttgatgtggccatggtgtctct 132671
>ref|XM_513127.1| PREDICTED: Pan troglodytes uroporphyrinogen decarboxylase (LOC456541), mRNA Length = 1223 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 978 ccactgtccagtcaagcccaa 958
>gb|AC107684.7| Mus musculus chromosome 5, clone RP24-389O5, complete sequence Length = 121239 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 tgagttgatttggccatggtgtctctaca 252 |||||| |||||| ||||||||||||||| Sbjct: 84208 tgagttaatttggtcatggtgtctctaca 84236
>gb|AC107356.6| Rattus norvegicus 4 BAC CH230-50N14 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 31066 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 ||||||| ||||||||||||||||| Sbjct: 10569 gagttgacttggccatggtgtctct 10545
>gb|AC126600.6| Mus musculus chromosome 1, clone RP23-145J9, complete sequence Length = 219130 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 146506 gagttgttttggccatggtgtctct 146482
>gb|AC138175.10| Mus musculus chromosome 5, clone RP23-4L6, complete sequence Length = 211333 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 tgagttgatttggccatggtgtctctaca 252 |||||| |||||| ||||||||||||||| Sbjct: 35636 tgagttaatttggtcatggtgtctctaca 35664
>gb|AC119943.12| Mus musculus chromosome 10, clone RP24-271F24, complete sequence Length = 174009 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 52386 gagttgctttggccatggtgtctct 52410
>ref|XM_878508.1| PREDICTED: Bos taurus similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 9 (LOC504914), mRNA Length = 1635 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 908 ccactgtccagtcaagcccaa 888
>ref|XM_878443.1| PREDICTED: Bos taurus similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 7 (LOC504914), mRNA Length = 1104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 787 ccactgtccagtcaagcccaa 767
>ref|XM_878407.1| PREDICTED: Bos taurus similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 6 (LOC504914), mRNA Length = 1216 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 899 ccactgtccagtcaagcccaa 879
>ref|XM_878361.1| PREDICTED: Bos taurus similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 5 (LOC504914), mRNA Length = 1145 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 828 ccactgtccagtcaagcccaa 808
>ref|XM_878323.1| PREDICTED: Bos taurus similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 4 (LOC504914), mRNA Length = 1164 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 847 ccactgtccagtcaagcccaa 827
>ref|XM_581108.2| PREDICTED: Bos taurus similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 1 (LOC504914), mRNA Length = 1225 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 908 ccactgtccagtcaagcccaa 888
>ref|XM_878241.1| PREDICTED: Bos taurus similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 3 (LOC504914), mRNA Length = 1058 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 746 ccactgtccagtcaagcccaa 726
>ref|XM_878208.1| PREDICTED: Bos taurus similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 2 (LOC504914), mRNA Length = 1787 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 1060 ccactgtccagtcaagcccaa 1040
>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence Length = 385816 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 tacacagatgcataatgaaca 219 ||||||||||||||||||||| Sbjct: 126033 tacacagatgcataatgaaca 126053
>ref|XM_653597.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1085.2), mRNA Length = 2577 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 taagttgaccctggaaaaggg 397 ||||||||||||||||||||| Sbjct: 1243 taagttgaccctggaaaaggg 1223
>ref|XM_532602.2| PREDICTED: Canis familiaris similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 1 (LOC475378), mRNA Length = 1202 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 886 ccactgtccagtcaagcccaa 866
>ref|XM_856829.1| PREDICTED: Canis familiaris similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 6 (LOC475378), mRNA Length = 1002 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 757 ccactgtccagtcaagcccaa 737
>ref|XM_856801.1| PREDICTED: Canis familiaris similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 5 (LOC475378), mRNA Length = 1125 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 809 ccactgtccagtcaagcccaa 789
>ref|XM_856777.1| PREDICTED: Canis familiaris similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 4 (LOC475378), mRNA Length = 1042 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 726 ccactgtccagtcaagcccaa 706
>ref|XM_856744.1| PREDICTED: Canis familiaris similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 3 (LOC475378), mRNA Length = 1271 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 955 ccactgtccagtcaagcccaa 935
>ref|XM_856719.1| PREDICTED: Canis familiaris similar to Uroporphyrinogen decarboxylase (URO-D) (UPD), transcript variant 2 (LOC475378), mRNA Length = 1232 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 916 ccactgtccagtcaagcccaa 896
>gb|AC127568.4| Mus musculus BAC clone RP24-215P13 from chromosome 10, complete sequence Length = 206192 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 6846 gagttgctttggccatggtgtctct 6822
>gb|AC124488.3| Mus musculus BAC clone RP23-452K20 from chromosome 1, complete sequence Length = 178446 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||||||||| |||||||||||| Sbjct: 145894 gagttgatttgggcatggtgtctct 145870
>gb|AC124689.5| Mus musculus BAC clone RP24-147N6 from chromosome 6, complete sequence Length = 187752 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 ||||||| ||||||||||||||||| Sbjct: 171345 gagttgacttggccatggtgtctct 171321
>gb|AC126276.3| Mus musculus BAC clone RP23-113J19 from 10, complete sequence Length = 195021 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 163357 gagttgctttggccatggtgtctct 163333
>gb|AC122314.4| Mus musculus BAC clone RP23-301K1 from 12, complete sequence Length = 205285 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 ||||||||||| ||||||||||||| Sbjct: 163538 gagttgatttgaccatggtgtctct 163562
>gb|AC115631.4| Mus musculus BAC clone RP24-128K6 from 18, complete sequence Length = 179355 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ggaactaaaacagaaagggtt 114 ||||||||||||||||||||| Sbjct: 34548 ggaactaaaacagaaagggtt 34568
>gb|AC034122.12| Mus musculus chromosome 1, clone RP23-169C19, complete sequence Length = 208469 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||||| |||||||||||||||| Sbjct: 197098 gagttgatgtggccatggtgtctct 197074
>gb|AC159100.2| Mus musculus BAC clone RP24-248F9 from chromosome 9, complete sequence Length = 161485 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||||||||| |||||||||||| Sbjct: 110127 gagttgatttggtcatggtgtctct 110103
>emb|AL359473.22| Human DNA sequence from clone RP11-69J16 on chromosome 1 Contains the gene for a novel protein (FLJ31983), the UROD gene for uroporphyrinogen decarboxylase, the 3' end of the ZSWIM5 gene for zinc finger SWIM domain containing 5, a DC2 protein pseudogene and a CpG island, complete sequence Length = 79340 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 20642 ccactgtccagtcaagcccaa 20622
>gb|AC027740.11| Mus musculus, clone RP23-57M1, complete sequence Length = 261093 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ggaactaaaacagaaagggtt 114 ||||||||||||||||||||| Sbjct: 23947 ggaactaaaacagaaagggtt 23967
>gb|AY292986.1| Homo sapiens uroporphyrinogen decarboxylase (UROD) gene, complete cds Length = 4513 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 3661 ccactgtccagtcaagcccaa 3641
>emb|AJ295031.1|OAR295031 Ovis aries urod gene for uroporphyrinogen decarboxylase, exons 1-10 Length = 3645 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 2783 ccactgtccagtcaagcccaa 2763
>emb|AL672160.11| Mouse DNA sequence from clone RP23-144K18 on chromosome 4, complete sequence Length = 146373 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||||||||| |||||||||||| Sbjct: 48295 gagttgatttggtcatggtgtctct 48319
>gb|BT007972.1| Synthetic construct Homo sapiens uroporphyrinogen decarboxylase mRNA, partial cds Length = 1104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 859 ccactgtccagtcaagcccaa 839
>gb|BT006737.1| Homo sapiens uroporphyrinogen decarboxylase mRNA, complete cds Length = 1104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 859 ccactgtccagtcaagcccaa 839
>emb|CR456624.7| Zebrafish DNA sequence from clone CH211-69E5 in linkage group 13, complete sequence Length = 172195 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 521 tatggatttcatcagtcaata 541 ||||||||||||||||||||| Sbjct: 24991 tatggatttcatcagtcaata 25011
>gb|AC158143.6| Mus musculus chromosome 5, clone RP23-409I5, complete sequence Length = 191873 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 34835 gagttgctttggccatggtgtctct 34859
>emb|CR857901.1| Pongo pygmaeus mRNA; cDNA DKFZp459N1650 (from clone DKFZp459N1650) Length = 1415 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 924 ccactgtccagtcaagcccaa 904
>ref|NM_204916.1| Gallus gallus ornithine decarboxylase antizyme 1 (OAZ1), mRNA Length = 1020 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 444 ttcttctggtgtttgctgaagaaca 468 ||||||||| ||||||||||||||| Sbjct: 490 ttcttctggagtttgctgaagaaca 514
>gb|AC160411.8| Mus musculus BAC RP23-231J3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207444 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 8287 gagttgctttggccatggtgtctct 8263
>gb|BC103285.1| Bos taurus cDNA clone IMAGE:7989660 Length = 2037 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 1376 ccactgtccagtcaagcccaa 1356
>emb|CR619530.1| full-length cDNA clone CS0DM006YP09 of Fetal liver of Homo sapiens (human) Length = 1262 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 970 ccactgtccagtcaagcccaa 950
>emb|CR616226.1| full-length cDNA clone CS0DI005YH15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1130 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 840 ccactgtccagtcaagcccaa 820
>emb|CR612288.1| full-length cDNA clone CL0BB013ZD03 of Neuroblastoma of Homo sapiens (human) Length = 1237 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 918 ccactgtccagtcaagcccaa 898
>emb|CR600525.1| full-length cDNA clone CS0DI083YG20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 840 ccactgtccagtcaagcccaa 820
>emb|CR599631.1| full-length cDNA clone CS0DI034YO14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1130 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 840 ccactgtccagtcaagcccaa 820
>emb|CR595230.1| full-length cDNA clone CS0DI032YH16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1052 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 799 ccactgtccagtcaagcccaa 779
>emb|CR595045.1| full-length cDNA clone CS0DE001YD20 of Placenta of Homo sapiens (human) Length = 1617 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 1325 ccactgtccagtcaagcccaa 1305
>emb|AL954375.6| Mouse DNA sequence from clone RP23-16F14 on chromosome 2, complete sequence Length = 172487 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 ||||||| ||||||||||||||||| Sbjct: 62589 gagttgacttggccatggtgtctct 62565
>ref|NM_000374.3| Homo sapiens uroporphyrinogen decarboxylase (UROD), mRNA Length = 1383 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 967 ccactgtccagtcaagcccaa 947
>emb|CR542057.1| Homo sapiens full open reading frame cDNA clone RZPDo834A1036D for gene UROD, uroporphyrinogen decarboxylase; complete cds, without stopcodon Length = 1101 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 859 ccactgtccagtcaagcccaa 839
>emb|CR456976.1| Homo sapiens full open reading frame cDNA clone RZPDo834C065D for gene UROD, uroporphyrinogen decarboxylase; complete cds, incl. stopcodon Length = 1104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 859 ccactgtccagtcaagcccaa 839
>gb|AC087795.5|AC087795 Genomic Sequence for Mus musculus, clone RP23-181H5, complete sequence Length = 220811 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ggaactaaaacagaaagggtt 114 ||||||||||||||||||||| Sbjct: 23320 ggaactaaaacagaaagggtt 23340
>gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 180869 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 131431 gagttgctttggccatggtgtctct 131455
>gb|AC160405.7| Mus musculus BAC RP23-380K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184615 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 114461 gagttgctttggccatggtgtctct 114437
>gb|AC160409.6| Mus musculus 10 BAC RP23-184O11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209766 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 60906 gagttgctttggccatggtgtctct 60930
>gb|AC156022.2| Mus musculus BAC clone RP23-201E13 from chromosome 5, complete sequence Length = 225445 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 atacacagatgcataatgaacaaaa 222 ||||||| ||||||||||||||||| Sbjct: 140795 atacacatatgcataatgaacaaaa 140771
>gb|AC009295.14|AC009295 Mus musculus chromosome 10, clone RP21-39C4, complete sequence Length = 159108 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 99139 gagttgctttggccatggtgtctct 99163
>gb|AY892020.1| Synthetic construct Homo sapiens clone FLH110550.01L uroporphyrinogen decarboxylase (UROD) mRNA, partial cds Length = 1104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 859 ccactgtccagtcaagcccaa 839
>gb|AY889558.1| Synthetic construct Homo sapiens clone FLH110555.01X uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 859 ccactgtccagtcaagcccaa 839
>gb|AY889557.1| Synthetic construct Homo sapiens clone FLH110554.01X uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 859 ccactgtccagtcaagcccaa 839
>emb|BX649238.1| Mouse DNA sequence from clone RP23-1G1 on chromosome X, complete sequence Length = 43051 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 40337 gagttgctttggccatggtgtctct 40313
>emb|BX647308.1|HSM807452 Homo sapiens mRNA; cDNA DKFZp686O11196 (from clone DKFZp686O11196) Length = 1914 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 1527 ccactgtccagtcaagcccaa 1507
>emb|X82833.1|NTUDEC N.tabacum mRNA for uroporphyrinogen decarboxylase Length = 1477 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 610 ctccttccatctgccatatccactgtcca 638 ||||||||||| |||||||| |||||||| Sbjct: 988 ctccttccatcagccatatcaactgtcca 960
>gb|AY894072.1| Synthetic construct Homo sapiens clone FLH131228.01L uroporphyrinogen decarboxylase (UROD) mRNA, partial cds Length = 1104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 859 ccactgtccagtcaagcccaa 839
>gb|AC157016.3| Mus musculus 10 BAC RP24-505M19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168538 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 56275 gagttgctttggccatggtgtctct 56299
>emb|AL772230.20| Mouse DNA sequence from clone RP23-381K3 on chromosome 4, complete sequence Length = 120564 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||||||||| |||||||||||| Sbjct: 5942 gagttgatttggtcatggtgtctct 5918
>gb|AF104440.1|AF104440 Homo sapiens isolate sporadic PCT patient 10 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104439.1|AF104439 Homo sapiens isolate sporadic PCT patient 9 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104438.1|AF104438 Homo sapiens isolate sporadic PCT patient 8 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104437.1|AF104437 Homo sapiens isolate sporadic PCT patient 7 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104436.1|AF104436 Homo sapiens isolate sporadic PCT patient 6 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104435.1|AF104435 Homo sapiens isolate sporadic PCT patient 5 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104434.1|AF104434 Homo sapiens isolate sporadic PCT patient 4 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104433.1|AF104433 Homo sapiens isolate sporadic PCT patient 3 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104432.1|AF104432 Homo sapiens isolate sporadic PCT patient 2 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104431.1|AF104431 Homo sapiens isolate sporadic PCT patient 1 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104430.1|AF104430 Homo sapiens isolate normal patient 10 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104429.1|AF104429 Homo sapiens isolate normal patient 9 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104428.1|AF104428 Homo sapiens isolate normal patient 8 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104427.1|AF104427 Homo sapiens isolate normal patient 7 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104426.1|AF104426 Homo sapiens isolate normal patient 6 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104425.1|AF104425 Homo sapiens isolate normal patient 5 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104424.1|AF104424 Homo sapiens isolate normal patient 4 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104423.1|AF104423 Homo sapiens isolate normal patient 3 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104422.1|AF104422 Homo sapiens isolate normal patient 2 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF104421.1|AF104421 Homo sapiens isolate normal patient 1 uroporphyrinogen decarboxylase (UROD) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>gb|AF103017.1|HSURODE2 Homo sapiens uroporphyrinogen decarboxylase (UROD) gene, exons 8, 9 and 10 and partial cds Length = 858 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 125 ccactgtccagtcaagcccaa 105
>gb|AF007806.1|AF007806 Gallus gallus ornithine decarboxylase antizyme mRNA, complete cds Length = 1020 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 444 ttcttctggtgtttgctgaagaaca 468 ||||||||| ||||||||||||||| Sbjct: 490 ttcttctggagtttgctgaagaaca 514
>gb|AC117749.6| Mus musculus chromosome 1, clone RP24-319I19, complete sequence Length = 174793 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||||| |||||||||||||||| Sbjct: 133333 gagttgatgtggccatggtgtctct 133309
>emb|CT030181.13| Mouse DNA sequence from clone RP23-115A18 on chromosome 9, complete sequence Length = 281479 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||||||||| |||||||||||| Sbjct: 54776 gagttgatttggtcatggtgtctct 54752
>gb|U30787.1|HSU30787 Human uroporphyrinogen decarboxylase (URO-D) gene, complete cds Length = 4514 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 3660 ccactgtccagtcaagcccaa 3640
>emb|BX255964.5| Mouse DNA sequence from clone RP24-550A20 on chromosome 4, complete sequence Length = 78485 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||||||||| |||||||||||| Sbjct: 35523 gagttgatttggtcatggtgtctct 35547
>gb|AC140376.3| Mus musculus BAC clone RP24-78P21 from 12, complete sequence Length = 246636 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 ||||||||||| ||||||||||||| Sbjct: 12854 gagttgatttgaccatggtgtctct 12878
>gb|AF047383.1|AF047383 Homo sapiens uroporphyrinogen decarboxylase (UROD) gene, complete cds Length = 3659 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 2885 ccactgtccagtcaagcccaa 2865
>gb|AC146603.3| Mus musculus BAC clone RP23-304P17 from 8, complete sequence Length = 167842 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 154383 gagttggtttggccatggtgtctct 154407
>gb|BC001778.1| Homo sapiens uroporphyrinogen decarboxylase, mRNA (cDNA clone MGC:1856 IMAGE:3542421), complete cds Length = 1263 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 887 ccactgtccagtcaagcccaa 867
>emb|CR854857.19| Zebrafish DNA sequence from clone CH211-129F7 in linkage group 13, complete sequence Length = 170079 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 521 tatggatttcatcagtcaata 541 ||||||||||||||||||||| Sbjct: 161900 tatggatttcatcagtcaata 161920
>gb|M14016.1|HUMUROD Human uroporphyrinogen decarboxylase mRNA, complete cds Length = 1197 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 877 ccactgtccagtcaagcccaa 857
>emb|X89267.1|HSUROPDEC H.sapiens DNA for uroporphyrinogen decarboxylase gene Length = 4514 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 629 ccactgtccagtcaagcccaa 649 ||||||||||||||||||||| Sbjct: 3660 ccactgtccagtcaagcccaa 3640
>emb|AL732463.7| Mouse DNA sequence from clone RP23-216N18 on chromosome X, complete sequence Length = 158239 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctct 249 |||||| |||||||||||||||||| Sbjct: 9032 gagttgttttggccatggtgtctct 9008
>gb|AC163612.3| Mus musculus BAC clone RP23-89N5 from chromosome 16, complete sequence Length = 207953 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ttggccatggtgtctctaca 252 |||||||||||||||||||| Sbjct: 123996 ttggccatggtgtctctaca 124015
>gb|AC118250.12| Mus musculus chromosome 15, clone RP23-412A24, complete sequence Length = 166986 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 agttgatttggccatggtgt 245 |||||||||||||||||||| Sbjct: 3297 agttgatttggccatggtgt 3278
>gb|AC133907.9| Mus musculus chromosome 1, clone RP24-239K20, complete sequence Length = 150662 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 agttgatttggccatggtgtctct 249 ||||| |||||||||||||||||| Sbjct: 94002 agttgctttggccatggtgtctct 94025
>ref|XM_422608.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ25955 (LOC424790), mRNA Length = 1584 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 aatatgtagaaggtgttgagctga 308 ||||||||||||||| |||||||| Sbjct: 245 aatatgtagaaggtggtgagctga 268
>gb|AC124084.8| Mus musculus chromosome 15, clone RP24-410P21, complete sequence Length = 183447 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 agttgatttggccatggtgt 245 |||||||||||||||||||| Sbjct: 140840 agttgatttggccatggtgt 140821
>gb|AC125028.8| Mus musculus chromosome 16, clone RP24-85G10, complete sequence Length = 269788 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gaaaagggtgtcatatctca 409 |||||||||||||||||||| Sbjct: 51224 gaaaagggtgtcatatctca 51243
>gb|AC109807.9| Mus musculus chromosome 1, clone RP23-433B11, complete sequence Length = 227679 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 agttgatttggccatggtgtctct 249 ||||| |||||||||||||||||| Sbjct: 25418 agttgctttggccatggtgtctct 25441
>gb|AC131781.3| Mus musculus BAC clone RP24-344J9 from chromosome 15, complete sequence Length = 139338 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ttggccatggtgtctctaca 252 |||||||||||||||||||| Sbjct: 1694 ttggccatggtgtctctaca 1713
>gb|AC160517.3| Mus musculus chromosome 8, clone RP23-279A11, complete sequence Length = 169477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctc 248 |||||| ||||||||||||||||| Sbjct: 149947 gagttgctttggccatggtgtctc 149970
>gb|AC119880.11| Mus musculus chromosome 7, clone RP24-428H4, complete sequence Length = 187158 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 agaaggtgttgagctgagaa 311 |||||||||||||||||||| Sbjct: 158077 agaaggtgttgagctgagaa 158096
>gb|AC113110.17| Mus musculus chromosome 16, clone RP23-328A9, complete sequence Length = 240173 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gaaaagggtgtcatatctca 409 |||||||||||||||||||| Sbjct: 19554 gaaaagggtgtcatatctca 19535
>gb|AC101758.6| Mus musculus chromosome 1, clone RP24-75F14, complete sequence Length = 268826 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 agttgatttggccatggtgtctct 249 ||||| |||||||||||||||||| Sbjct: 106869 agttgctttggccatggtgtctct 106892
>gb|AC135086.3| Mus musculus BAC clone RP23-110L10 from chromosome 15, complete sequence Length = 225159 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 attgagttgatttggccatggtgt 245 ||||||||||||||| |||||||| Sbjct: 10981 attgagttgatttggtcatggtgt 11004
>emb|CT009691.8| Zebrafish DNA sequence from clone CH73-64E1 in linkage group 5, complete sequence Length = 99497 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 545 gtaatggtgaaaatagatatgctg 568 ||||||| |||||||||||||||| Sbjct: 82016 gtaatggagaaaatagatatgctg 81993
>emb|CT009677.9| Mouse DNA sequence from clone CH29-485N6 on chromosome 17, complete sequence Length = 183118 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gaaaagggtgtcatatctca 409 |||||||||||||||||||| Sbjct: 106029 gaaaagggtgtcatatctca 106048
>gb|AC131799.3| Mus musculus BAC clone RP24-535N4 from chromosome 17, complete sequence Length = 120764 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gaaaagggtgtcatatctca 409 |||||||||||||||||||| Sbjct: 6609 gaaaagggtgtcatatctca 6628
>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete sequence Length = 208462 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 ctgaagaacaccatggccca 478 |||||||||||||||||||| Sbjct: 93194 ctgaagaacaccatggccca 93175
>gb|AC091611.5| Homo sapiens chromosome 1 clone RP11-369L17, complete sequence Length = 198486 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 atgcaaggaactaaaacagaaagg 111 |||||||||| ||||||||||||| Sbjct: 63392 atgcaaggaattaaaacagaaagg 63415
>gb|AC112998.15| Mus musculus chromosome 3, clone RP23-147E7, complete sequence Length = 203273 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 agttgatttggccatggtgtctct 249 ||||||||||| |||||||||||| Sbjct: 160878 agttgatttggtcatggtgtctct 160901
>gb|AC126040.3| Mus musculus BAC clone RP24-258K7 from chromosome 17, complete sequence Length = 151040 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gaaaagggtgtcatatctca 409 |||||||||||||||||||| Sbjct: 129673 gaaaagggtgtcatatctca 129692
>gb|AC121958.3| Mus musculus BAC clone RP24-241I3 from 15, complete sequence Length = 159574 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 attgagttgatttggccatggtgt 245 ||||||||||||||| |||||||| Sbjct: 147199 attgagttgatttggtcatggtgt 147222
>gb|AC004929.2| Homo sapiens PAC clone RP5-917G4 from 7, complete sequence Length = 106827 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cataatgaacaaaattgagt 228 |||||||||||||||||||| Sbjct: 78327 cataatgaacaaaattgagt 78346
>gb|AC116385.5| Mus musculus chromosome 5, clone RP23-17A11, complete sequence Length = 217711 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 agttgatttggccatggtgt 245 |||||||||||||||||||| Sbjct: 153976 agttgatttggccatggtgt 153995
>gb|AC102527.6| Mus musculus chromosome 8, clone RP23-29G4, complete sequence Length = 197976 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctc 248 |||||| ||||||||||||||||| Sbjct: 145024 gagttgctttggccatggtgtctc 145001
>ref|XM_781756.1| PREDICTED: Strongylocentrotus purpuratus similar to CG6954-PA (LOC581770), mRNA Length = 5061 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 tcaagctccttgtgacatcaaaga 430 ||||||||| |||||||||||||| Sbjct: 3113 tcaagctccatgtgacatcaaaga 3136
>emb|F38006.1|MMTBL1 Mus musculus partial Tbl1 gene Length = 17934 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 taaactggaatgataaccaa 88 |||||||||||||||||||| Sbjct: 8163 taaactggaatgataaccaa 8144
>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8 Length = 98192 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 440 cggcttcttctggtgtttgctgaagaac 467 ||||||||||||||| ||||||| |||| Sbjct: 11649 cggcttcttctggtggttgctgacgaac 11676
>gb|AC091026.6| Homo sapiens chromosome 8, clone CTD-2584D11, complete sequence Length = 81523 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ctccagctcccttctaaaag 154 |||||||||||||||||||| Sbjct: 49409 ctccagctcccttctaaaag 49390
>gb|AC140778.15| Mus musculus chromosome 1, clone RP24-446J17, complete sequence Length = 160859 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 agttgatttggccatggtgtctct 249 ||||| |||||||||||||||||| Sbjct: 155890 agttgctttggccatggtgtctct 155867
>gb|AC093437.2| Drosophila melanogaster 3L BAC RP98-5P17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 197878 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 tgtttgctgaagaacaccatggcc 476 |||||||||||| ||||||||||| Sbjct: 4556 tgtttgctgaaggacaccatggcc 4579
>ref|NM_140276.2| Drosophila melanogaster CG6947-RA (CG6947), mRNA Length = 4208 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 tgtttgctgaagaacaccatggcc 476 |||||||||||| ||||||||||| Sbjct: 3741 tgtttgctgaaggacaccatggcc 3764
>gb|AC010698.7| Drosophila melanogaster 3L BAC RP98-15K18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174631 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 tgtttgctgaagaacaccatggcc 476 |||||||||||| ||||||||||| Sbjct: 23995 tgtttgctgaaggacaccatggcc 23972
>gb|AY071497.1| Drosophila melanogaster RE55745 full length cDNA Length = 4221 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 tgtttgctgaagaacaccatggcc 476 |||||||||||| ||||||||||| Sbjct: 3741 tgtttgctgaaggacaccatggcc 3764
>gb|AC021355.8| Homo sapiens, clone RP11-24P4, complete sequence Length = 154561 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ctccagctcccttctaaaag 154 |||||||||||||||||||| Sbjct: 11327 ctccagctcccttctaaaag 11308
>gb|AC161493.6| Mus musculus chromosome 1, clone RP24-77I21, complete sequence Length = 226794 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 agttgatttggccatggtgtctct 249 ||||| |||||||||||||||||| Sbjct: 182922 agttgctttggccatggtgtctct 182945
>gb|AC083909.20|AC083909 Mus musculus 1 BAC RP23-424A2 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 204857 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctctaca 252 |||||| ||||| ||||||||||||||| Sbjct: 85811 gagttgctttggtcatggtgtctctaca 85784
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 aatgctgccggccaccatca 353 |||||||||||||||||||| Sbjct: 2764288 aatgctgccggccaccatca 2764307
>gb|AC157580.5| Mus musculus chromosome 15, clone RP24-82M3, complete sequence Length = 207974 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 agttgatttggccatggtgt 245 |||||||||||||||||||| Sbjct: 6824 agttgatttggccatggtgt 6843
>gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosome 16, complete sequence Length = 197884 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ttggccatggtgtctctaca 252 |||||||||||||||||||| Sbjct: 191048 ttggccatggtgtctctaca 191067
>emb|BX510916.7| Zebrafish DNA sequence from clone DKEY-208B17 in linkage group 5, complete sequence Length = 174866 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 545 gtaatggtgaaaatagatatgctg 568 ||||||| |||||||||||||||| Sbjct: 91732 gtaatggagaaaatagatatgctg 91709
>gb|AC154635.2| Mus musculus BAC clone RP23-299N21 from 13, complete sequence Length = 157982 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 127 tgaataaactccagctcccttctaaaagcagg 158 |||| |||||| |||||| ||||||||||||| Sbjct: 36266 tgaagaaactcaagctcctttctaaaagcagg 36235
>emb|BX664748.8| Zebrafish DNA sequence from clone DKEY-3N7 in linkage group 4, complete sequence Length = 206047 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gcaaggaactaaaacagaaa 109 |||||||||||||||||||| Sbjct: 110622 gcaaggaactaaaacagaaa 110603
>gb|AE003543.4| Drosophila melanogaster chromosome 3L, section 42 of 83 of the complete sequence Length = 276132 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 tgtttgctgaagaacaccatggcc 476 |||||||||||| ||||||||||| Sbjct: 248421 tgtttgctgaaggacaccatggcc 248444
>gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, complete sequence Length = 237801 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ttggccatggtgtctctaca 252 |||||||||||||||||||| Sbjct: 54150 ttggccatggtgtctctaca 54131
>gb|AC121139.20| Mus musculus chromosome 5, clone RP23-429G1, complete sequence Length = 206249 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cataatgaacaaaattgagt 228 |||||||||||||||||||| Sbjct: 95057 cataatgaacaaaattgagt 95076
>gb|AC140942.1| Gallus gallus BAC clone TAM32-50C11 from chromosome ul, complete sequence Length = 140346 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 tgtttgctgaagaacaccat 472 |||||||||||||||||||| Sbjct: 7727 tgtttgctgaagaacaccat 7708
>gb|AC126931.4| Mus musculus BAC clone RP23-389M9 from 9, complete sequence Length = 189423 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gaaaagggtgtcatatctca 409 |||||||||||||||||||| Sbjct: 91604 gaaaagggtgtcatatctca 91585
>emb|CR759821.9| Zebrafish DNA sequence from clone DKEY-190C14 in linkage group 5, complete sequence Length = 169089 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 545 gtaatggtgaaaatagatatgctg 568 ||||||| |||||||||||||||| Sbjct: 72287 gtaatggagaaaatagatatgctg 72264
>emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chromosome X, complete sequence Length = 164443 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 210 ataatgaacaaaattgagttgatttggc 237 ||||| |||||||||||||| ||||||| Sbjct: 155263 ataataaacaaaattgagtttatttggc 155236
>emb|AL450397.19| Mouse DNA sequence from clone RP23-100G16 on chromosome X, complete sequence Length = 228645 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gaaaagggtgtcatatctca 409 |||||||||||||||||||| Sbjct: 20850 gaaaagggtgtcatatctca 20869
>emb|AL714017.11| Mouse DNA sequence from clone RP23-91C19 on chromosome X, complete sequence Length = 240597 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 taaactggaatgataaccaa 88 |||||||||||||||||||| Sbjct: 18052 taaactggaatgataaccaa 18033
>emb|AL583891.15| Mouse DNA sequence from clone RP23-292L2 on chromosome 15, complete sequence Length = 170132 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 225 gagttgatttggccatggtgtctctaca 252 |||||| ||||| ||||||||||||||| Sbjct: 10616 gagttgctttggtcatggtgtctctaca 10643
>emb|AL607123.22| Mouse DNA sequence from clone RP23-391E6 on chromosome 4, complete sequence Length = 149369 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gaaaagggtgtcatatctca 409 |||||||||||||||||||| Sbjct: 40926 gaaaagggtgtcatatctca 40945
>emb|AL669944.8| Mouse DNA sequence from clone RP23-388G23 on chromosome 11, complete sequence Length = 76047 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 225 gagttgatttggccatggtgtctctaca 252 |||||| ||||| ||||||||||||||| Sbjct: 36315 gagttgctttggtcatggtgtctctaca 36288 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,411,751 Number of Sequences: 3902068 Number of extensions: 6411751 Number of successful extensions: 123438 Number of sequences better than 10.0: 189 Number of HSP's better than 10.0 without gapping: 189 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122991 Number of HSP's gapped (non-prelim): 439 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
