| Clone Name | rbags1p13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-G02, full insert sequence Length = 761 Score = 280 bits (141), Expect = 4e-72 Identities = 253/291 (86%) Strand = Plus / Minus Query: 143 tttgctcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtca 202 ||||||||||| |||| |||||| ||||| ||||| || |||||| |||| |||||||| Sbjct: 527 tttgctcattttgcttgggggtgtgaagcaatgaaatcaactgcaactttaatggagtcg 468 Query: 203 attttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcaca 262 || |||||||||||||| |||||||||| ||| ||||||||||||||||| | ||| ||| Sbjct: 467 atcttgtcagcttcattgtcaggtatctcaaaaccaaattcctcttccaaagccatgaca 408 Query: 263 acctccactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctgctttc 322 ||||||||||| ||||||||||| || |||||||||| |||||| || ||||||| | | Sbjct: 407 acctccactgcgtccaaactgtctagaccaagatcattcttgaaatgtgcatctggtgtg 348 Query: 323 accttggataggttgtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcg 382 ||||||| ||| ||||||||||||||||||| |||||||||||| | ||||||||| | Sbjct: 347 accttggcggggtcgtcgatcttctggaagttcctgacgaccttgacgatgcgctcggtg 288 Query: 383 acctcttccttgtctaggaacgaccccttggcgtnctccgacgacatccac 433 ||||| ||||||| ||||||||||||||||| | |||||||||||||||| Sbjct: 287 acctcggccttgtccaggaacgaccccttggcctcctccgacgacatccac 237
>gb|AY105638.1| Zea mays PCO080082 mRNA sequence Length = 665 Score = 222 bits (112), Expect = 7e-55 Identities = 242/286 (84%) Strand = Plus / Minus Query: 148 tcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtcaatttt 207 |||||| |||| ||||| || || |||||||| |||||| |||||| ||||||||| || Sbjct: 495 tcatttcgcttgcgggtgtgaggcaatgaagtcaactgcaactttgacggagtcaatctt 436 Query: 208 gtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacctc 267 |||||||||||| |||||||||| || | ||||||||||||| || ||| |||||||| Sbjct: 435 gtcagcttcattgtcaggtatctcgaatctgaattcctcttccagggccatgacaacctc 376 Query: 268 cactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctgctttcacctt 327 |||||||||||||||||| ||||||||||||| |||||| |||||||||| | ||||||| Sbjct: 375 cactgcatccaaactgtctaggccaagatcattcttgaaatgggcatctggtgtcacctt 316 Query: 328 ggataggttgtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctc 387 ||| ||| ||||||||| ||||| ||||||||||||||||| |||| || | |||||| Sbjct: 315 ggaggggtcatcgatcttcgggaagctcttgacgaccttgatgatgcgttcagtgacctc 256 Query: 388 ttccttgtctaggaacgaccccttggcgtnctccgacgacatccac 433 ||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 255 gctcttatccaggaaagagcccttggcatcctccgaagacatccac 210
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 174 bits (88), Expect = 2e-40 Identities = 153/175 (87%) Strand = Plus / Plus Query: 143 tttgctcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtca 202 ||||||||||| |||| |||||| ||||| ||||| || |||||| |||| |||||||| Sbjct: 13232937 tttgctcattttgcttgggggtgtgaagcaatgaaatcaactgcaactttaatggagtcg 13232996 Query: 203 attttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcaca 262 || |||||||||||||| |||||||||| ||| ||||||||||||||||| | ||| ||| Sbjct: 13232997 atcttgtcagcttcattgtcaggtatctcaaaaccaaattcctcttccaaagccatgaca 13233056 Query: 263 acctccactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctg 317 ||||||||||| ||||||||||| || |||||||||| |||||| || ||||||| Sbjct: 13233057 acctccactgcgtccaaactgtctagaccaagatcattcttgaaatgtgcatctg 13233111 Score = 123 bits (62), Expect = 5e-25 Identities = 88/97 (90%) Strand = Plus / Plus Query: 337 gtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtc 396 ||||||||||||||||||| |||||||||||| | ||||||||| |||||| ||||||| Sbjct: 13234755 gtcgatcttctggaagttcctgacgaccttgacgatgcgctcggtgacctcggccttgtc 13234814 Query: 397 taggaacgaccccttggcgtnctccgacgacatccac 433 ||||||||||||||||| | |||||||||||||||| Sbjct: 13234815 caggaacgaccccttggcctcctccgacgacatccac 13234851 Score = 91.7 bits (46), Expect = 2e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 357 tgacgaccttgatggtgcgctcggcgacctcttccttgtctaggaacgaccccttggcgt 416 |||||||||||| | ||||||||| |||||| ||||||| ||||||||||||||||| | Sbjct: 13250663 tgacgaccttgacgatgcgctcggtgacctcggccttgtccaggaacgaccccttggcct 13250722 Query: 417 nctccgacgacatccac 433 |||||||||||||||| Sbjct: 13250723 cctccgacgacatccac 13250739
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 174 bits (88), Expect = 2e-40 Identities = 153/175 (87%) Strand = Plus / Plus Query: 143 tttgctcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtca 202 ||||||||||| |||| |||||| ||||| ||||| || |||||| |||| |||||||| Sbjct: 13229712 tttgctcattttgcttgggggtgtgaagcaatgaaatcaactgcaactttaatggagtcg 13229771 Query: 203 attttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcaca 262 || |||||||||||||| |||||||||| ||| ||||||||||||||||| | ||| ||| Sbjct: 13229772 atcttgtcagcttcattgtcaggtatctcaaaaccaaattcctcttccaaagccatgaca 13229831 Query: 263 acctccactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctg 317 ||||||||||| ||||||||||| || |||||||||| |||||| || ||||||| Sbjct: 13229832 acctccactgcgtccaaactgtctagaccaagatcattcttgaaatgtgcatctg 13229886 Score = 123 bits (62), Expect = 5e-25 Identities = 88/97 (90%) Strand = Plus / Plus Query: 337 gtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtc 396 ||||||||||||||||||| |||||||||||| | ||||||||| |||||| ||||||| Sbjct: 13231530 gtcgatcttctggaagttcctgacgaccttgacgatgcgctcggtgacctcggccttgtc 13231589 Query: 397 taggaacgaccccttggcgtnctccgacgacatccac 433 ||||||||||||||||| | |||||||||||||||| Sbjct: 13231590 caggaacgaccccttggcctcctccgacgacatccac 13231626 Score = 91.7 bits (46), Expect = 2e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 357 tgacgaccttgatggtgcgctcggcgacctcttccttgtctaggaacgaccccttggcgt 416 |||||||||||| | ||||||||| |||||| ||||||| ||||||||||||||||| | Sbjct: 13247438 tgacgaccttgacgatgcgctcggtgacctcggccttgtccaggaacgaccccttggcct 13247497 Query: 417 nctccgacgacatccac 433 |||||||||||||||| Sbjct: 13247498 cctccgacgacatccac 13247514
>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07, from chromosome 3, complete sequence Length = 149539 Score = 174 bits (88), Expect = 2e-40 Identities = 153/175 (87%) Strand = Plus / Minus Query: 143 tttgctcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtca 202 ||||||||||| |||| |||||| ||||| ||||| || |||||| |||| |||||||| Sbjct: 86904 tttgctcattttgcttgggggtgtgaagcaatgaaatcaactgcaactttaatggagtcg 86845 Query: 203 attttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcaca 262 || |||||||||||||| |||||||||| ||| ||||||||||||||||| | ||| ||| Sbjct: 86844 atcttgtcagcttcattgtcaggtatctcaaaaccaaattcctcttccaaagccatgaca 86785 Query: 263 acctccactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctg 317 ||||||||||| ||||||||||| || |||||||||| |||||| || ||||||| Sbjct: 86784 acctccactgcgtccaaactgtctagaccaagatcattcttgaaatgtgcatctg 86730 Score = 123 bits (62), Expect = 5e-25 Identities = 88/97 (90%) Strand = Plus / Minus Query: 337 gtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtc 396 ||||||||||||||||||| |||||||||||| | ||||||||| |||||| ||||||| Sbjct: 85086 gtcgatcttctggaagttcctgacgaccttgacgatgcgctcggtgacctcggccttgtc 85027 Query: 397 taggaacgaccccttggcgtnctccgacgacatccac 433 ||||||||||||||||| | |||||||||||||||| Sbjct: 85026 caggaacgaccccttggcctcctccgacgacatccac 84990 Score = 91.7 bits (46), Expect = 2e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 357 tgacgaccttgatggtgcgctcggcgacctcttccttgtctaggaacgaccccttggcgt 416 |||||||||||| | ||||||||| |||||| ||||||| ||||||||||||||||| | Sbjct: 69178 tgacgaccttgacgatgcgctcggtgacctcggccttgtccaggaacgaccccttggcct 69119 Query: 417 nctccgacgacatccac 433 |||||||||||||||| Sbjct: 69118 cctccgacgacatccac 69102
>ref|NM_105202.2| Arabidopsis thaliana acyl carrier/ cofactor binding / phosphopantetheine binding AT1G65290 mRNA, complete cds Length = 653 Score = 69.9 bits (35), Expect = 7e-09 Identities = 70/82 (85%) Strand = Plus / Minus Query: 206 ttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacc 265 ||||| |||||||||||||| |||| ||| ||||||||||| ||||| | ||||||||| Sbjct: 359 ttgtctgcttcattatcagggatctcaaacccaaattcctcctccaatgccatcacaact 300 Query: 266 tccactgcatccaaactgtcca 287 ||||| ||||||||||||| Sbjct: 299 tccacactgtccaaactgtcca 278
>gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 sequence, complete sequence Length = 88292 Score = 69.9 bits (35), Expect = 7e-09 Identities = 70/82 (85%) Strand = Plus / Plus Query: 206 ttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacc 265 ||||| |||||||||||||| |||| ||| ||||||||||| ||||| | ||||||||| Sbjct: 15208 ttgtctgcttcattatcagggatctcaaacccaaattcctcctccaatgccatcacaact 15267 Query: 266 tccactgcatccaaactgtcca 287 ||||| ||||||||||||| Sbjct: 15268 tccacactgtccaaactgtcca 15289
>gb|AY085236.1| Arabidopsis thaliana clone 14066 mRNA, complete sequence Length = 654 Score = 69.9 bits (35), Expect = 7e-09 Identities = 70/82 (85%) Strand = Plus / Minus Query: 206 ttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacc 265 ||||| |||||||||||||| |||| ||| ||||||||||| ||||| | ||||||||| Sbjct: 360 ttgtctgcttcattatcagggatctcaaacccaaattcctcctccaatgccatcacaact 301 Query: 266 tccactgcatccaaactgtcca 287 ||||| ||||||||||||| Sbjct: 300 tccacactgtccaaactgtcca 279
>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21, complete sequence Length = 139074 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 338 tcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtct 397 |||| ||||||||||||||||||||| || | |||| ||||||||||| ||||||| Sbjct: 15979 tcgaccttctggaagttcttgacgacggagacgatgcggtcggcgacctcgcccttgtcg 16038 Query: 398 aggaacgaccccttgg 413 |||||||| ||||||| Sbjct: 16039 aggaacgagcccttgg 16054 Score = 52.0 bits (26), Expect = 0.002 Identities = 85/105 (80%) Strand = Plus / Plus Query: 175 gaagtccactgcagctttgatggagtcaattttgtcagcttcattatcaggtatctnaaa 234 |||||| ||||| | ||||||||||||||| || || || || ||||| || |||| || Sbjct: 14095 gaagtcaactgccgttttgatggagtcaatcttctctgcctcgttatctgggatctcgaa 14154 Query: 235 gccaaattcctcttccaaggacatcacaacctccactgcatccaa 279 ||||||||| || || |||| ||| |||| ||| |||| |||||| Sbjct: 14155 gccaaattcttcctcaaaggccatgacaatctcaactgtatccaa 14199
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 338 tcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtct 397 |||| ||||||||||||||||||||| || | |||| ||||||||||| ||||||| Sbjct: 84051 tcgaccttctggaagttcttgacgacggagacgatgcggtcggcgacctcgcccttgtcg 84110 Query: 398 aggaacgaccccttgg 413 |||||||| ||||||| Sbjct: 84111 aggaacgagcccttgg 84126 Score = 52.0 bits (26), Expect = 0.002 Identities = 85/105 (80%) Strand = Plus / Plus Query: 175 gaagtccactgcagctttgatggagtcaattttgtcagcttcattatcaggtatctnaaa 234 |||||| ||||| | ||||||||||||||| || || || || ||||| || |||| || Sbjct: 82167 gaagtcaactgccgttttgatggagtcaatcttctctgcctcgttatctgggatctcgaa 82226 Query: 235 gccaaattcctcttccaaggacatcacaacctccactgcatccaa 279 ||||||||| || || |||| ||| |||| ||| |||| |||||| Sbjct: 82227 gccaaattcttcctcaaaggccatgacaatctcaactgtatccaa 82271
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 338 tcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtct 397 |||| ||||||||||||||||||||| || | |||| ||||||||||| ||||||| Sbjct: 18048724 tcgaccttctggaagttcttgacgacggagacgatgcggtcggcgacctcgcccttgtcg 18048783 Query: 398 aggaacgaccccttgg 413 |||||||| ||||||| Sbjct: 18048784 aggaacgagcccttgg 18048799 Score = 52.0 bits (26), Expect = 0.002 Identities = 85/105 (80%) Strand = Plus / Plus Query: 175 gaagtccactgcagctttgatggagtcaattttgtcagcttcattatcaggtatctnaaa 234 |||||| ||||| | ||||||||||||||| || || || || ||||| || |||| || Sbjct: 18046840 gaagtcaactgccgttttgatggagtcaatcttctctgcctcgttatctgggatctcgaa 18046899 Query: 235 gccaaattcctcttccaaggacatcacaacctccactgcatccaa 279 ||||||||| || || |||| ||| |||| ||| |||| |||||| Sbjct: 18046900 gccaaattcttcctcaaaggccatgacaatctcaactgtatccaa 18046944
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 364 cttgatggtgcgctcggcgacctcttcct 392 ||||| ||||||||||||||||||||||| Sbjct: 817946 cttgaaggtgcgctcggcgacctcttcct 817918
>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence Length = 113361 Score = 46.1 bits (23), Expect = 0.094 Identities = 67/82 (81%) Strand = Plus / Minus Query: 206 ttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacc 265 ||||| |||||||||||||| |||| ||| ||||| || || || | | |||||||| | Sbjct: 99753 ttgtctgcttcattatcaggaatctcaaacccaaactcttcctcaagagccatcacaatc 99694 Query: 266 tccactgcatccaaactgtcca 287 || || ||||||||||| |||| Sbjct: 99693 tctacagcatccaaactatcca 99672
>gb|BT017032.1| Zea mays clone EL01N0202C03.c mRNA sequence Length = 717 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 338 tcgatcttctggaagttcttgacgac 363 |||| ||||||||||||||||||||| Sbjct: 262 tcgaccttctggaagttcttgacgac 237
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 362 accttgatggtgcgctcggcgacctc 387 |||||||||||||| ||||||||||| Sbjct: 275328 accttgatggtgcgttcggcgacctc 275303
>gb|AY108647.1| Zea mays PCO081040 mRNA sequence Length = 758 Score = 42.1 bits (21), Expect = 1.5 Identities = 57/69 (82%) Strand = Plus / Minus Query: 343 cttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtctaggaa 402 ||||||||||||||||||||| || | || || |||||||| ||||||| ||||| Sbjct: 292 cttctggaagttcttgacgacggagacgacacggtcagcgacctcgcccttgtcgaggaa 233 Query: 403 cgacccctt 411 ||||||||| Sbjct: 232 cgacccctt 224
>ref|XM_748997.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g15350) partial mRNA Length = 732 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cactgcagctttgatggagt 200 |||||||||||||||||||| Sbjct: 216 cactgcagctttgatggagt 197
>gb|U41014.2| Caenorhabditis elegans cosmid C06G1, complete sequence Length = 45205 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 actaacaactacagcatagc 134 |||||||||||||||||||| Sbjct: 22911 actaacaactacagcatagc 22892
>emb|AL513023.12| Human DNA sequence from clone RP11-256A6 on chromosome 6, complete sequence Length = 165699 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 caacctccactgcatccaaa 280 |||||||||||||||||||| Sbjct: 109461 caacctccactgcatccaaa 109442
>emb|AL356095.11| Human DNA sequence from clone RP11-369J21 on chromosome 10 Contains a pseudogene similar to part of homeobox proteins, three nuclear DNA binding protein (C1D) pseudogenes, three novel genes, a ribosomal protein L22 (RPL22) pseudogene, the 3' end of the ANXA11 gene for annexin A11 and two CpG islands, complete sequence Length = 172079 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gatggagtcaattttgtcag 212 |||||||||||||||||||| Sbjct: 49499 gatggagtcaattttgtcag 49480
>emb|AJ555450.1|OAM555450 Odontophrynus americanus partial 18S rRNA gene, tetraploid individual Length = 1889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tggtgcgctcggcgacctct 388 |||||||||||||||||||| Sbjct: 233 tggtgcgctcggcgacctct 214
>emb|AJ555449.1|OAM555449 Odontophrynus americanus partial 18S rRNA gene, diploid individual Length = 1889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tggtgcgctcggcgacctct 388 |||||||||||||||||||| Sbjct: 233 tggtgcgctcggcgacctct 214
>emb|BX842685.6| Zebrafish DNA sequence from clone DKEY-28C10 in linkage group 5, complete sequence Length = 133388 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 accttggataggttgtcgatcttc 346 ||||||| |||||||||||||||| Sbjct: 121342 accttggttaggttgtcgatcttc 121319
>gb|DQ374058.1| Beta vulgaris chromosome 9 clone BAC132 genomic sequence Length = 11541 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaagccaaattcctcttcca 251 |||||||||||||||||||| Sbjct: 490 aaagccaaattcctcttcca 509
>gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, complete sequence Length = 171191 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cttccaaggacatcacaacc 265 |||||||||||||||||||| Sbjct: 54012 cttccaaggacatcacaacc 54031
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 cgaccttgatggtgcgctcg 379 |||||||||||||||||||| Sbjct: 4219115 cgaccttgatggtgcgctcg 4219096 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,025,964 Number of Sequences: 3902068 Number of extensions: 3025964 Number of successful extensions: 56564 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56400 Number of HSP's gapped (non-prelim): 160 length of query: 433 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 411 effective length of database: 17,147,199,772 effective search space: 7047499106292 effective search space used: 7047499106292 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)