ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1p13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK059673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
2gb|AY105638.1| Zea mays PCO080082 mRNA sequence 222 7e-55
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 174 2e-40
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare str... 174 2e-40
6ref|NM_105202.2| Arabidopsis thaliana acyl carrier/ cofactor bin... 70 7e-09
7gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 se... 70 7e-09
8gb|AY085236.1| Arabidopsis thaliana clone 14066 mRNA, complete s... 70 7e-09
9gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
10gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
12gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 50 0.006
13gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete ... 46 0.094
14gb|BT017032.1| Zea mays clone EL01N0202C03.c mRNA sequence 44 0.37
15emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete ch... 44 0.37
16gb|AY108647.1| Zea mays PCO081040 mRNA sequence 42 1.5
17ref|XM_748997.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.8
18gb|U41014.2| Caenorhabditis elegans cosmid C06G1, complete sequence 40 5.8
19emb|AL513023.12| Human DNA sequence from clone RP11-256A6 on chr... 40 5.8
20emb|AL356095.11| Human DNA sequence from clone RP11-369J21 on ch... 40 5.8
21emb|AJ555450.1|OAM555450 Odontophrynus americanus partial 18S rR... 40 5.8
22emb|AJ555449.1|OAM555449 Odontophrynus americanus partial 18S rR... 40 5.8
23emb|BX842685.6| Zebrafish DNA sequence from clone DKEY-28C10 in ... 40 5.8
24gb|DQ374058.1| Beta vulgaris chromosome 9 clone BAC132 genomic s... 40 5.8
25gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, co... 40 5.8
26dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.8

>dbj|AK059673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-G02, full
           insert sequence
          Length = 761

 Score =  280 bits (141), Expect = 4e-72
 Identities = 253/291 (86%)
 Strand = Plus / Minus

                                                                       
Query: 143 tttgctcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtca 202
           ||||||||||| |||| |||||| ||||| ||||| || |||||| |||| |||||||| 
Sbjct: 527 tttgctcattttgcttgggggtgtgaagcaatgaaatcaactgcaactttaatggagtcg 468

                                                                       
Query: 203 attttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcaca 262
           || |||||||||||||| |||||||||| ||| ||||||||||||||||| | ||| |||
Sbjct: 467 atcttgtcagcttcattgtcaggtatctcaaaaccaaattcctcttccaaagccatgaca 408

                                                                       
Query: 263 acctccactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctgctttc 322
           ||||||||||| ||||||||||| || |||||||||| |||||| || ||||||| | | 
Sbjct: 407 acctccactgcgtccaaactgtctagaccaagatcattcttgaaatgtgcatctggtgtg 348

                                                                       
Query: 323 accttggataggttgtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcg 382
           |||||||   ||| ||||||||||||||||||| |||||||||||| | ||||||||| |
Sbjct: 347 accttggcggggtcgtcgatcttctggaagttcctgacgaccttgacgatgcgctcggtg 288

                                                              
Query: 383 acctcttccttgtctaggaacgaccccttggcgtnctccgacgacatccac 433
           |||||  ||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 287 acctcggccttgtccaggaacgaccccttggcctcctccgacgacatccac 237



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>gb|AY105638.1| Zea mays PCO080082 mRNA sequence
          Length = 665

 Score =  222 bits (112), Expect = 7e-55
 Identities = 242/286 (84%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtcaatttt 207
           |||||| ||||  ||||| || || |||||||| |||||| |||||| ||||||||| ||
Sbjct: 495 tcatttcgcttgcgggtgtgaggcaatgaagtcaactgcaactttgacggagtcaatctt 436

                                                                       
Query: 208 gtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacctc 267
           |||||||||||| ||||||||||  || |  ||||||||||||| || ||| ||||||||
Sbjct: 435 gtcagcttcattgtcaggtatctcgaatctgaattcctcttccagggccatgacaacctc 376

                                                                       
Query: 268 cactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctgctttcacctt 327
           |||||||||||||||||| ||||||||||||| |||||| |||||||||| | |||||||
Sbjct: 375 cactgcatccaaactgtctaggccaagatcattcttgaaatgggcatctggtgtcacctt 316

                                                                       
Query: 328 ggataggttgtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctc 387
           |||  |||  ||||||||| ||||| ||||||||||||||||| |||| || | ||||||
Sbjct: 315 ggaggggtcatcgatcttcgggaagctcttgacgaccttgatgatgcgttcagtgacctc 256

                                                         
Query: 388 ttccttgtctaggaacgaccccttggcgtnctccgacgacatccac 433
              ||| || ||||| || |||||||| | |||||| |||||||||
Sbjct: 255 gctcttatccaggaaagagcccttggcatcctccgaagacatccac 210



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  174 bits (88), Expect = 2e-40
 Identities = 153/175 (87%)
 Strand = Plus / Plus

                                                                            
Query: 143      tttgctcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtca 202
                ||||||||||| |||| |||||| ||||| ||||| || |||||| |||| |||||||| 
Sbjct: 13232937 tttgctcattttgcttgggggtgtgaagcaatgaaatcaactgcaactttaatggagtcg 13232996

                                                                            
Query: 203      attttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcaca 262
                || |||||||||||||| |||||||||| ||| ||||||||||||||||| | ||| |||
Sbjct: 13232997 atcttgtcagcttcattgtcaggtatctcaaaaccaaattcctcttccaaagccatgaca 13233056

                                                                       
Query: 263      acctccactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctg 317
                ||||||||||| ||||||||||| || |||||||||| |||||| || |||||||
Sbjct: 13233057 acctccactgcgtccaaactgtctagaccaagatcattcttgaaatgtgcatctg 13233111



 Score =  123 bits (62), Expect = 5e-25
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                            
Query: 337      gtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtc 396
                ||||||||||||||||||| |||||||||||| | ||||||||| ||||||  |||||||
Sbjct: 13234755 gtcgatcttctggaagttcctgacgaccttgacgatgcgctcggtgacctcggccttgtc 13234814

                                                     
Query: 397      taggaacgaccccttggcgtnctccgacgacatccac 433
                 ||||||||||||||||| | ||||||||||||||||
Sbjct: 13234815 caggaacgaccccttggcctcctccgacgacatccac 13234851



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                            
Query: 357      tgacgaccttgatggtgcgctcggcgacctcttccttgtctaggaacgaccccttggcgt 416
                |||||||||||| | ||||||||| ||||||  ||||||| ||||||||||||||||| |
Sbjct: 13250663 tgacgaccttgacgatgcgctcggtgacctcggccttgtccaggaacgaccccttggcct 13250722

                                 
Query: 417      nctccgacgacatccac 433
                 ||||||||||||||||
Sbjct: 13250723 cctccgacgacatccac 13250739



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  174 bits (88), Expect = 2e-40
 Identities = 153/175 (87%)
 Strand = Plus / Plus

                                                                            
Query: 143      tttgctcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtca 202
                ||||||||||| |||| |||||| ||||| ||||| || |||||| |||| |||||||| 
Sbjct: 13229712 tttgctcattttgcttgggggtgtgaagcaatgaaatcaactgcaactttaatggagtcg 13229771

                                                                            
Query: 203      attttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcaca 262
                || |||||||||||||| |||||||||| ||| ||||||||||||||||| | ||| |||
Sbjct: 13229772 atcttgtcagcttcattgtcaggtatctcaaaaccaaattcctcttccaaagccatgaca 13229831

                                                                       
Query: 263      acctccactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctg 317
                ||||||||||| ||||||||||| || |||||||||| |||||| || |||||||
Sbjct: 13229832 acctccactgcgtccaaactgtctagaccaagatcattcttgaaatgtgcatctg 13229886



 Score =  123 bits (62), Expect = 5e-25
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                            
Query: 337      gtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtc 396
                ||||||||||||||||||| |||||||||||| | ||||||||| ||||||  |||||||
Sbjct: 13231530 gtcgatcttctggaagttcctgacgaccttgacgatgcgctcggtgacctcggccttgtc 13231589

                                                     
Query: 397      taggaacgaccccttggcgtnctccgacgacatccac 433
                 ||||||||||||||||| | ||||||||||||||||
Sbjct: 13231590 caggaacgaccccttggcctcctccgacgacatccac 13231626



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                            
Query: 357      tgacgaccttgatggtgcgctcggcgacctcttccttgtctaggaacgaccccttggcgt 416
                |||||||||||| | ||||||||| ||||||  ||||||| ||||||||||||||||| |
Sbjct: 13247438 tgacgaccttgacgatgcgctcggtgacctcggccttgtccaggaacgaccccttggcct 13247497

                                 
Query: 417      nctccgacgacatccac 433
                 ||||||||||||||||
Sbjct: 13247498 cctccgacgacatccac 13247514



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>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07,
             from chromosome 3, complete sequence
          Length = 149539

 Score =  174 bits (88), Expect = 2e-40
 Identities = 153/175 (87%)
 Strand = Plus / Minus

                                                                         
Query: 143   tttgctcatttggctttggggtgcgaagcgatgaagtccactgcagctttgatggagtca 202
             ||||||||||| |||| |||||| ||||| ||||| || |||||| |||| |||||||| 
Sbjct: 86904 tttgctcattttgcttgggggtgtgaagcaatgaaatcaactgcaactttaatggagtcg 86845

                                                                         
Query: 203   attttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcaca 262
             || |||||||||||||| |||||||||| ||| ||||||||||||||||| | ||| |||
Sbjct: 86844 atcttgtcagcttcattgtcaggtatctcaaaaccaaattcctcttccaaagccatgaca 86785

                                                                    
Query: 263   acctccactgcatccaaactgtccaggccaagatcatccttgaagtgggcatctg 317
             ||||||||||| ||||||||||| || |||||||||| |||||| || |||||||
Sbjct: 86784 acctccactgcgtccaaactgtctagaccaagatcattcttgaaatgtgcatctg 86730



 Score =  123 bits (62), Expect = 5e-25
 Identities = 88/97 (90%)
 Strand = Plus / Minus

                                                                         
Query: 337   gtcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtc 396
             ||||||||||||||||||| |||||||||||| | ||||||||| ||||||  |||||||
Sbjct: 85086 gtcgatcttctggaagttcctgacgaccttgacgatgcgctcggtgacctcggccttgtc 85027

                                                  
Query: 397   taggaacgaccccttggcgtnctccgacgacatccac 433
              ||||||||||||||||| | ||||||||||||||||
Sbjct: 85026 caggaacgaccccttggcctcctccgacgacatccac 84990



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 357   tgacgaccttgatggtgcgctcggcgacctcttccttgtctaggaacgaccccttggcgt 416
             |||||||||||| | ||||||||| ||||||  ||||||| ||||||||||||||||| |
Sbjct: 69178 tgacgaccttgacgatgcgctcggtgacctcggccttgtccaggaacgaccccttggcct 69119

                              
Query: 417   nctccgacgacatccac 433
              ||||||||||||||||
Sbjct: 69118 cctccgacgacatccac 69102



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>ref|NM_105202.2| Arabidopsis thaliana acyl carrier/ cofactor binding /
           phosphopantetheine binding AT1G65290 mRNA, complete cds
          Length = 653

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 206 ttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacc 265
           ||||| |||||||||||||| |||| ||| ||||||||||| ||||| | ||||||||| 
Sbjct: 359 ttgtctgcttcattatcagggatctcaaacccaaattcctcctccaatgccatcacaact 300

                                 
Query: 266 tccactgcatccaaactgtcca 287
           |||||    |||||||||||||
Sbjct: 299 tccacactgtccaaactgtcca 278



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>gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 sequence, complete sequence
          Length = 88292

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                         
Query: 206   ttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacc 265
             ||||| |||||||||||||| |||| ||| ||||||||||| ||||| | ||||||||| 
Sbjct: 15208 ttgtctgcttcattatcagggatctcaaacccaaattcctcctccaatgccatcacaact 15267

                                   
Query: 266   tccactgcatccaaactgtcca 287
             |||||    |||||||||||||
Sbjct: 15268 tccacactgtccaaactgtcca 15289



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>gb|AY085236.1| Arabidopsis thaliana clone 14066 mRNA, complete sequence
          Length = 654

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 206 ttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacc 265
           ||||| |||||||||||||| |||| ||| ||||||||||| ||||| | ||||||||| 
Sbjct: 360 ttgtctgcttcattatcagggatctcaaacccaaattcctcctccaatgccatcacaact 301

                                 
Query: 266 tccactgcatccaaactgtcca 287
           |||||    |||||||||||||
Sbjct: 300 tccacactgtccaaactgtcca 279



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>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0039A21, complete sequence
          Length = 139074

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                         
Query: 338   tcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtct 397
             |||| |||||||||||||||||||||   || | |||| |||||||||||  ||||||| 
Sbjct: 15979 tcgaccttctggaagttcttgacgacggagacgatgcggtcggcgacctcgcccttgtcg 16038

                             
Query: 398   aggaacgaccccttgg 413
             |||||||| |||||||
Sbjct: 16039 aggaacgagcccttgg 16054



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                         
Query: 175   gaagtccactgcagctttgatggagtcaattttgtcagcttcattatcaggtatctnaaa 234
             |||||| ||||| | ||||||||||||||| || || || || ||||| || ||||  ||
Sbjct: 14095 gaagtcaactgccgttttgatggagtcaatcttctctgcctcgttatctgggatctcgaa 14154

                                                          
Query: 235   gccaaattcctcttccaaggacatcacaacctccactgcatccaa 279
             ||||||||| || || |||| ||| |||| ||| |||| ||||||
Sbjct: 14155 gccaaattcttcctcaaaggccatgacaatctcaactgtatccaa 14199



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>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0007A06, complete sequence
          Length = 148029

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                         
Query: 338   tcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtct 397
             |||| |||||||||||||||||||||   || | |||| |||||||||||  ||||||| 
Sbjct: 84051 tcgaccttctggaagttcttgacgacggagacgatgcggtcggcgacctcgcccttgtcg 84110

                             
Query: 398   aggaacgaccccttgg 413
             |||||||| |||||||
Sbjct: 84111 aggaacgagcccttgg 84126



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                         
Query: 175   gaagtccactgcagctttgatggagtcaattttgtcagcttcattatcaggtatctnaaa 234
             |||||| ||||| | ||||||||||||||| || || || || ||||| || ||||  ||
Sbjct: 82167 gaagtcaactgccgttttgatggagtcaatcttctctgcctcgttatctgggatctcgaa 82226

                                                          
Query: 235   gccaaattcctcttccaaggacatcacaacctccactgcatccaa 279
             ||||||||| || || |||| ||| |||| ||| |||| ||||||
Sbjct: 82227 gccaaattcttcctcaaaggccatgacaatctcaactgtatccaa 82271



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                            
Query: 338      tcgatcttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtct 397
                |||| |||||||||||||||||||||   || | |||| |||||||||||  ||||||| 
Sbjct: 18048724 tcgaccttctggaagttcttgacgacggagacgatgcggtcggcgacctcgcccttgtcg 18048783

                                
Query: 398      aggaacgaccccttgg 413
                |||||||| |||||||
Sbjct: 18048784 aggaacgagcccttgg 18048799



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                            
Query: 175      gaagtccactgcagctttgatggagtcaattttgtcagcttcattatcaggtatctnaaa 234
                |||||| ||||| | ||||||||||||||| || || || || ||||| || ||||  ||
Sbjct: 18046840 gaagtcaactgccgttttgatggagtcaatcttctctgcctcgttatctgggatctcgaa 18046899

                                                             
Query: 235      gccaaattcctcttccaaggacatcacaacctccactgcatccaa 279
                ||||||||| || || |||| ||| |||| ||| |||| ||||||
Sbjct: 18046900 gccaaattcttcctcaaaggccatgacaatctcaactgtatccaa 18046944



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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 364    cttgatggtgcgctcggcgacctcttcct 392
              ||||| |||||||||||||||||||||||
Sbjct: 817946 cttgaaggtgcgctcggcgacctcttcct 817918



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>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence
          Length = 113361

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                         
Query: 206   ttgtcagcttcattatcaggtatctnaaagccaaattcctcttccaaggacatcacaacc 265
             ||||| |||||||||||||| |||| ||| ||||| || || || |  | |||||||| |
Sbjct: 99753 ttgtctgcttcattatcaggaatctcaaacccaaactcttcctcaagagccatcacaatc 99694

                                   
Query: 266   tccactgcatccaaactgtcca 287
             || || ||||||||||| ||||
Sbjct: 99693 tctacagcatccaaactatcca 99672



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>gb|BT017032.1| Zea mays clone EL01N0202C03.c mRNA sequence
          Length = 717

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 338 tcgatcttctggaagttcttgacgac 363
           |||| |||||||||||||||||||||
Sbjct: 262 tcgaccttctggaagttcttgacgac 237



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>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12
          Length = 340900

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 362    accttgatggtgcgctcggcgacctc 387
              |||||||||||||| |||||||||||
Sbjct: 275328 accttgatggtgcgttcggcgacctc 275303



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>gb|AY108647.1| Zea mays PCO081040 mRNA sequence
          Length = 758

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                       
Query: 343 cttctggaagttcttgacgaccttgatggtgcgctcggcgacctcttccttgtctaggaa 402
           |||||||||||||||||||||   || |   || || ||||||||  ||||||| |||||
Sbjct: 292 cttctggaagttcttgacgacggagacgacacggtcagcgacctcgcccttgtcgaggaa 233

                    
Query: 403 cgacccctt 411
           |||||||||
Sbjct: 232 cgacccctt 224



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>ref|XM_748997.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g15350)
           partial mRNA
          Length = 732

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 181 cactgcagctttgatggagt 200
           ||||||||||||||||||||
Sbjct: 216 cactgcagctttgatggagt 197



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>gb|U41014.2| Caenorhabditis elegans cosmid C06G1, complete sequence
          Length = 45205

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   actaacaactacagcatagc 134
             ||||||||||||||||||||
Sbjct: 22911 actaacaactacagcatagc 22892



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>emb|AL513023.12| Human DNA sequence from clone RP11-256A6 on chromosome 6, complete
              sequence
          Length = 165699

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    caacctccactgcatccaaa 280
              ||||||||||||||||||||
Sbjct: 109461 caacctccactgcatccaaa 109442



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>emb|AL356095.11| Human DNA sequence from clone RP11-369J21 on chromosome 10 Contains a
             pseudogene similar to part of homeobox proteins, three
             nuclear DNA binding protein (C1D) pseudogenes, three novel
             genes, a ribosomal protein L22 (RPL22) pseudogene, the 3'
             end of the ANXA11 gene for annexin A11 and two CpG
             islands, complete sequence
          Length = 172079

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   gatggagtcaattttgtcag 212
             ||||||||||||||||||||
Sbjct: 49499 gatggagtcaattttgtcag 49480



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>emb|AJ555450.1|OAM555450 Odontophrynus americanus partial 18S rRNA gene, tetraploid
           individual
          Length = 1889

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 tggtgcgctcggcgacctct 388
           ||||||||||||||||||||
Sbjct: 233 tggtgcgctcggcgacctct 214



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>emb|AJ555449.1|OAM555449 Odontophrynus americanus partial 18S rRNA gene, diploid individual
          Length = 1889

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 tggtgcgctcggcgacctct 388
           ||||||||||||||||||||
Sbjct: 233 tggtgcgctcggcgacctct 214



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>emb|BX842685.6| Zebrafish DNA sequence from clone DKEY-28C10 in linkage group 5, complete
              sequence
          Length = 133388

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 323    accttggataggttgtcgatcttc 346
              ||||||| ||||||||||||||||
Sbjct: 121342 accttggttaggttgtcgatcttc 121319



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>gb|DQ374058.1| Beta vulgaris chromosome 9 clone BAC132 genomic sequence
          Length = 11541

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 aaagccaaattcctcttcca 251
           ||||||||||||||||||||
Sbjct: 490 aaagccaaattcctcttcca 509



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>gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, complete sequence
          Length = 171191

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   cttccaaggacatcacaacc 265
             ||||||||||||||||||||
Sbjct: 54012 cttccaaggacatcacaacc 54031



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 360     cgaccttgatggtgcgctcg 379
               ||||||||||||||||||||
Sbjct: 4219115 cgaccttgatggtgcgctcg 4219096


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,025,964
Number of Sequences: 3902068
Number of extensions: 3025964
Number of successful extensions: 56564
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56400
Number of HSP's gapped (non-prelim): 160
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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