ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags1p04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476044.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 894 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 433 cccttcttgtcacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 490 ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||| |||| Sbjct: 713 cccttcttgtcacctgtcttctggcctgacggtgtagcaatctttgctttcttatcag 656
>gb|AF255711.1|AF255711 Oryza sativa putative histone deacetylase HD2 mRNA, complete cds Length = 894 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 433 cccttcttgtcacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 490 ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||| |||| Sbjct: 713 cccttcttgtcacctgtcttctggcctgacggtgtagcaatctttgctttcttatcag 656
>dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142J09, full insert sequence Length = 1284 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 433 cccttcttgtcacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 490 ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||| |||| Sbjct: 797 cccttcttgtcacctgtcttctggcctgacggtgtagcaatctttgctttcttatcag 740
>dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B10, full insert sequence Length = 1161 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 433 cccttcttgtcacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 490 ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||| |||| Sbjct: 798 cccttcttgtcacctgtcttctggcctgacggtgtagcaatctttgctttcttatcag 741
>gb|AC005668.1|AC005668 Homo sapiens chromosome 17, clone hRPK.243_K_12, complete sequence Length = 152355 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 683 catcactgccatcatcatcactgtcatcatc 713 |||||||| |||||||||||||||||||||| Sbjct: 53121 catcactgtcatcatcatcactgtcatcatc 53151 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 681 gtcatcactgccatcatcatcactgtcatcatc 713 |||||| ||| |||||||||||||||||||||| Sbjct: 53203 gtcatcgctgtcatcatcatcactgtcatcatc 53235 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 679 tcgtcatcactgccatcatcatcactgtcatcatc 713 |||||||| ||| |||||||||| ||||||||||| Sbjct: 53012 tcgtcatcgctgtcatcatcatcgctgtcatcatc 53046 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 53178 catcatcatcactgtcatcatc 53199 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 53154 catcatcatcactgtcatcatc 53175 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 53070 catcatcatcactgtcatcatc 53091 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 670 tcgctgtcgtcgtcatcactgccatcatcatca 702 |||||||| || ||||||||| ||||||||||| Sbjct: 53207 tcgctgtcatcatcatcactgtcatcatcatca 53239
>emb|AL365401.20| Human DNA sequence from clone RP11-489M19 on chromosome 20 Contains part of the CDH4 gene for retinal cadherin 4 type 1 (R-cadherin), ESTs, STSs and GSSs, complete sequence Length = 108291 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatca 711 ||||||||||||||||||||||||| |||| Sbjct: 45370 tcatcactgccatcatcatcactgtaatca 45341
>gb|AC005701.1|AC005701 Homo sapiens chromosome 17, clone hRPK.628_E_12, complete sequence Length = 197455 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 684 atcactgccatcatcatcactgtcat 709 |||||||||||||||||||||||||| Sbjct: 46287 atcactgccatcatcatcactgtcat 46312
>gb|AC025540.7| Homo sapiens BAC clone RP11-295N22 from 7, complete sequence Length = 160896 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatcatcc 714 |||||| ||| |||||||||||||||||||||| Sbjct: 156468 tcatcattgctatcatcatcactgtcatcatcc 156436 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcat 709 ||||||||| ||||||||||| |||||| Sbjct: 157161 tcatcactgtcatcatcatcattgtcat 157134
>gb|AC111060.5| Mus musculus chromosome 1, clone RP24-121I5, complete sequence Length = 138419 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 686 cactgccatcatcatcactgtcat 709 |||||||||||||||||||||||| Sbjct: 75408 cactgccatcatcatcactgtcat 75385
>ref|XM_367582.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07493.4) partial mRNA Length = 2523 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 683 catcactgccatcatcatcactgtcatc 710 ||||||||||||||||||||| |||||| Sbjct: 2167 catcactgccatcatcatcaccgtcatc 2140
>gb|AC122898.4| Mus musculus BAC clone RP23-71K9 from 1, complete sequence Length = 230945 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Plus Query: 686 cactgccatcatcatcactgtcat 709 |||||||||||||||||||||||| Sbjct: 186538 cactgccatcatcatcactgtcat 186561
>gb|AC004006.1| Homo sapiens PAC clone RP4-740B21 from 7, complete sequence Length = 119453 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 431 cccccttcttgtcacctgttttct 454 |||||||||||||||||||||||| Sbjct: 106915 cccccttcttgtcacctgttttct 106892
>emb|Z83848.1|HS57A13 Human DNA sequence from clone RP1-57A13 on chromosome Xq24 Contains the 5' end of the GRIA3 gene for glutamate receptor, ionotrophic, AMPA 3, the gene for a novel protein and a CpG island, complete sequence Length = 169693 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 |||||||||||||||||||||||| Sbjct: 76373 gccatcatcatcactgtcatcatc 76350
>emb|AL078645.31|HSG115G20 Human DNA sequence from clone GS1-115G20 on chromosome 1 Contains part of the C1orf21 gene for chromosome 1 open reading frame 21, a novel pseudogene and a novel transcript, complete sequence Length = 206089 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||||| |||| |||||||||||||||||||| Sbjct: 135921 tcatcattgccttcatcatcactgtcatcatc 135890 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 ||||||||| ||||||||||| |||||||||| Sbjct: 135906 tcatcactgtcatcatcatcattgtcatcatc 135875
>emb|AJ234619.1|HVU234619 Hordeum vulgare genomic DNA fragment; clone MWG0884.rev Length = 490 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Plus Query: 443 cacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 490 ||||||| | |||||| ||||||||| |||| || ||||||||||||| Sbjct: 247 cacctgtgtcctggccagatggtgtttcaatcttagccttcttgtcag 294
>ref|XM_525964.1| PREDICTED: Pan troglodytes similar to Acetylcholine receptor protein, alpha chain precursor (LOC470583), mRNA Length = 1839 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatcatc 713 ||||||||||||||||||||||| Sbjct: 1628 ccatcatcatcactgtcatcatc 1650
>gb|AC110820.4| Mus musculus BAC clone RP23-273L3 from 15, complete sequence Length = 168415 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 675 gtcgtcgtcatcactgccatcatcatcactgtcatcatc 713 |||||| ||||||| | |||||||||||| ||||||||| Sbjct: 25390 gtcgtcatcatcaccgtcatcatcatcaccgtcatcatc 25352
>emb|AL831732.18| Human DNA sequence from clone RP11-396L10 on chromosome 1, complete sequence Length = 38529 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatcatc 713 ||||||||||||||||||||||| Sbjct: 26468 ccatcatcatcactgtcatcatc 26490
>emb|AL513307.10| Human DNA sequence from clone RP11-239E12 on chromosome 1, complete sequence Length = 168544 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatcatc 713 ||||||||||||||||||||||| Sbjct: 118705 ccatcatcatcactgtcatcatc 118683
>emb|AL513304.27| Human DNA sequence from clone RP11-398B16 on chromosome 10 Contains part of the gene for double-stranded RNA specific adenosine deaminase (ADAR3), a novel gene and two CpG islands, complete sequence Length = 163243 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatcatc 713 ||||||||||||||||||||||| Sbjct: 157238 ccatcatcatcactgtcatcatc 157260
>emb|AL137024.27| Human DNA sequence from clone RP11-45A16 on chromosome 9q32-33.3 Contains the 3' end of the PAPPA gene for pregnancy-associated plasma protein A, a novel gene and the 3'end of the ASTN2 gene for astrotactin 2, complete sequence Length = 159430 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatcatc 713 ||||||||||||||||||||||| Sbjct: 97014 ccatcatcatcactgtcatcatc 96992
>gb|AC080023.6| Homo sapiens chromosome 11, clone RP11-351I24, complete sequence Length = 189886 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatcatc 713 ||||||||||||||||||||||| Sbjct: 145375 ccatcatcatcactgtcatcatc 145397
>gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete sequence Length = 203250 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatcatc 713 ||||||||||||||||||||||| Sbjct: 179820 ccatcatcatcactgtcatcatc 179842 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatca 711 ||||||||||||||||||||| Sbjct: 179586 ccatcatcatcactgtcatca 179606 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 694 tcatcatcactgtcatcatc 713 |||||||||||||||||||| Sbjct: 179659 tcatcatcactgtcatcatc 179678 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 694 tcatcatcactgtcatcatc 713 |||||||||||||||||||| Sbjct: 179565 tcatcatcactgtcatcatc 179584
>emb|AL163872.2|CNS05TBN Human chromosome 14 DNA sequence BAC R-76E12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168486 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatcat 712 ||||||||||||||||||||| | ||||||| Sbjct: 46224 tcatcactgccatcatcatcattatcatcat 46194
>emb|AL355098.3|CNS05TCH Human chromosome 14 DNA sequence BAC R-241E13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 153094 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatcat 712 ||||||||||||||||||||| | ||||||| Sbjct: 111110 tcatcactgccatcatcatcattatcatcat 111080
>gb|AF047660.2| Caenorhabditis elegans cosmid T09A12, complete sequence Length = 32727 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 15633 catcatcatcactgtcatcatc 15612
>ref|XM_635858.1| Dictyostelium discoideum hypothetical protein (DDB0215217), partial mRNA Length = 843 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 286 catcatcatcactgtcatcatc 265
>ref|XM_509484.1| PREDICTED: Pan troglodytes similar to splicing factor, arginine/serine-rich 8 isoform 1; splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot, Drosophila homolog) (LOC452374), mRNA Length = 6957 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 3274 catcatcatcactgtcatcatc 3253
>gb|AY169336.1| Aeromonas schubertii strain CECT 4240 RNA polymerase sigma-70 factor (rpoD) gene, partial cds Length = 825 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 556 tcttcttcctcctcgtcagagctgtcctcgtcgg 589 ||||| ||||| ||||| |||||||||||||||| Sbjct: 274 tcttcctcctcttcgtcggagctgtcctcgtcgg 241
>ref|XM_589826.2| PREDICTED: Bos taurus similar to splicing factor, arginine/serine-rich 8 isoform 1 (LOC512326), mRNA Length = 3596 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 2350 catcatcatcactgtcatcatc 2329
>ref|NM_004592.2| Homo sapiens splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila) (SFRS8), transcript variant 2A, mRNA Length = 3245 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 1962 catcatcatcactgtcatcatc 1941
>gb|AC119968.9| Mus musculus chromosome 8, clone RP24-473C10, complete sequence Length = 202850 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 151080 catcatcatcactgtcatcatc 151101
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 676 tcgtcgtcatcactgccatcatcatcactgtcatcatc 713 ||||| ||| |||||||||||||| | ||||||||||| Sbjct: 11348607 tcgtcatcagcactgccatcatcacctctgtcatcatc 11348570
>ref|XM_534636.2| PREDICTED: Canis familiaris similar to splicing factor, arginine/serine-rich 8 isoform 1, transcript variant 1 (LOC477438), mRNA Length = 3250 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 1942 catcatcatcactgtcatcatc 1921
>ref|XM_799198.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506553.20) partial mRNA Length = 696 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 691 catcatcatcactgtcatcatc 670
>gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete sequence Length = 114956 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 67844 catcatcatcactgtcatcatc 67823
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 676 tcgtcgtcatcactgccatcatcatcactgtcatcatc 713 ||||| ||| |||||||||||||| | ||||||||||| Sbjct: 127560 tcgtcatcagcactgccatcatcacctctgtcatcatc 127523
>gb|AY127864.1| Aeromonas schubertii RNA polymerase sigma factor D gene, partial cds Length = 850 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 556 tcttcttcctcctcgtcagagctgtcctcgtcgg 589 ||||| ||||| ||||| |||||||||||||||| Sbjct: 302 tcttcctcctcttcgtcggagctgtcctcgtcgg 269
>emb|AL133229.40| Human DNA sequence from clone RP5-1167E19 on chromosome 20 Contains STSs, GSSs and a CpG island, complete sequence Length = 161776 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 141993 catcatcatcactgtcatcatc 142014
>emb|AL022337.19|HS796E4 Human DNA sequence from clone CTA-796E4 on chromosome 22q11.22-12.1, complete sequence Length = 134205 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 21440 catcatcatcactgtcatcatc 21419
>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1, complete sequence Length = 114771 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 40089 catcatcatcactgtcatcatc 40068
>gb|AC153511.4| Mus musculus 10 BAC RP23-102N12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196715 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 90272 catcatcatcactgtcatcatc 90251
>gb|BC008707.2| Homo sapiens splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila), mRNA (cDNA clone IMAGE:3050255), partial cds Length = 2421 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 1962 catcatcatcactgtcatcatc 1941
>gb|BC015953.2| Homo sapiens splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila), mRNA (cDNA clone IMAGE:3830054), partial cds Length = 2421 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 1962 catcatcatcactgtcatcatc 1941
>gb|AC123776.5| Homo sapiens chromosome 8, clone RP11-213I2, complete sequence Length = 157633 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatcat 712 |||||||||||||||||||||| Sbjct: 114922 ccatcatcatcactgtcatcat 114901
>dbj|AK092410.1| Homo sapiens cDNA FLJ35091 fis, clone PLACE6005786 Length = 1953 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 294 catcatcatcactgtcatcatc 273
>dbj|AK157085.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830201A08 product:unclassifiable, full insert sequence Length = 570 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 43 catcatcatcactgtcatcatc 22
>gb|AC012568.7| Homo sapiens chromosome 15, clone RP11-342M21, complete sequence Length = 166785 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 16816 catcatcatcactgtcatcatc 16795
>gb|AC105765.3| Homo sapiens chromosome 3 clone RP11-54L6, complete sequence Length = 178790 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 637 atgggaatcaatgctccatcag 658 |||||||||||||||||||||| Sbjct: 147162 atgggaatcaatgctccatcag 147183
>emb|AJ496547.1|TRU496547 Takifugu rubripes slc11 alpha gene for solute carrier family 11 protein, exons 1-15 Length = 6502 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 1745 catcatcatcactgtcatcatc 1724 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 ||||||| |||||||||||| |||||||||| Sbjct: 1614 tcatcaccaccatcatcatcattgtcatcatc 1583
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 676 tcgtcgtcatcactgccatcatcatcactgtcatcatc 713 ||||| ||| |||||||||||||| | ||||||||||| Sbjct: 11345370 tcgtcatcagcactgccatcatcacctctgtcatcatc 11345333
>gb|AC117500.13| Homo sapiens 12 BAC RP11-495K9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180995 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 19793 catcatcatcactgtcatcatc 19814
>dbj|AB195483.1| Balaenoptera borealis DNA, SINE flanking sequence Sei23 locus Length = 587 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 172 catcatcatcactgtcatcatc 151
>gb|AC021093.16|AC021093 Homo sapiens chromosome 8 clone RP11-213I2, complete sequence Length = 157604 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatcat 712 |||||||||||||||||||||| Sbjct: 114893 ccatcatcatcactgtcatcat 114872
>gb|AC133644.3| Homo sapiens BAC clone RP11-1399P15 from 2, complete sequence Length = 192181 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 40009 catcatcatcactgtcatcatc 40030
>gb|AC140542.3| Homo sapiens chromosome 16 clone XXfos-89147F6, complete sequence Length = 37849 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 14634 catcatcatcactgtcatcatc 14613
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 676 tcgtcgtcatcactgccatcatcatcactgtcatcatc 713 ||||| ||| |||||||||||||| | ||||||||||| Sbjct: 56904 tcgtcatcagcactgccatcatcacctctgtcatcatc 56867
>gb|AC137775.2| Homo sapiens chromosome 16 clone LA16c-466B3, complete sequence Length = 35828 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 19184 catcatcatcactgtcatcatc 19163
>gb|AC105105.10| Homo sapiens chromosome 18, clone RP11-1151B14, complete sequence Length = 147826 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 25683 catcatcatcactgtcatcatc 25704
>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence Length = 205662 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 51703 catcatcatcactgtcatcatc 51682
>gb|AC007857.2|AC007857 Homo sapiens chromosome 16 clone RPCI-11_523L20, complete sequence Length = 147421 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 14281 catcatcatcactgtcatcatc 14302
>gb|AC131101.3| Mus musculus BAC clone RP23-60O18 from 6, complete sequence Length = 182176 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 88454 catcatcatcactgtcatcatc 88433
>emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 on chromosome 3, complete sequence Length = 152399 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 42533 catcatcatcactgtcatcatc 42554
>emb|AL137846.24| Human DNA sequence from clone RP11-101K10 on chromosome 9, complete sequence Length = 162839 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatcac 703 |||||||||||||||||||||| Sbjct: 157477 tcatcactgccatcatcatcac 157498
>emb|CT033503.1| Platynereis dumerilii EST IB0AAA19AH12EM1 Length = 813 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 166 catcatcatcactgtcatcatc 145
>emb|CT033318.1| Platynereis dumerilii EST IB0AAA22CF02EM1 Length = 798 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 159 catcatcatcactgtcatcatc 138
>emb|CT033317.1| Platynereis dumerilii EST IB0AAA22CF02FM1 Length = 782 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 640 catcatcatcactgtcatcatc 661
>emb|CT032495.1| Platynereis dumerilii EST IB0AAA37BF03EM1 Length = 814 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 163 catcatcatcactgtcatcatc 142
>emb|CT032494.1| Platynereis dumerilii EST IB0AAA37BF03FM1 Length = 804 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 652 catcatcatcactgtcatcatc 673
>dbj|AB208921.1| Homo sapiens mRNA for SFRS8 protein variant protein Length = 5593 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 5156 catcatcatcactgtcatcatc 5135
>gb|AC158638.15| Mus musculus 10 BAC RP24-117O6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 185145 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 177488 catcatcatcactgtcatcatc 177467
>gb|AC107050.3| Homo sapiens BAC clone RP11-182A9 from 4, complete sequence Length = 167699 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 681 gtcatcactgccatcatcatca 702 |||||||||||||||||||||| Sbjct: 45792 gtcatcactgccatcatcatca 45813
>gb|U08377.1|HSU08377 Human homolog of Drosophila splicing regulator suppressor-of-white-apricot mRNA, complete cds Length = 3225 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcatc 713 |||||||||||||||||||||| Sbjct: 1942 catcatcatcactgtcatcatc 1921
>dbj|AB065601.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_164 Length = 18512 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatcac 703 |||||||||||||||||||||| Sbjct: 18274 tcatcactgccatcatcatcac 18295
>ref|XM_508570.1| PREDICTED: Pan troglodytes similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit) (LOC451343), mRNA Length = 2510 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| |||||||||||||| Sbjct: 1330 tcgtcatcactgctgtcatcatcactgtc 1302
>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16, complete sequence Length = 137872 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 gggcaagaacacatcaatcaaaata 204 ||||||||||||||||||| ||||| Sbjct: 67495 gggcaagaacacatcaatctaaata 67471
>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence Length = 193192 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatca 711 ||||||||||||||||||||| Sbjct: 128384 ccatcatcatcactgtcatca 128364
>gb|AC121499.9| Mus musculus chromosome 9, clone RP23-269E5, complete sequence Length = 212061 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 aacccagccagccaaccaaca 236 ||||||||||||||||||||| Sbjct: 80204 aacccagccagccaaccaaca 80224
>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence Length = 204108 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 caacccagccagccaaccaac 235 ||||||||||||||||||||| Sbjct: 128872 caacccagccagccaaccaac 128852
>ref|XM_861015.1| PREDICTED: Canis familiaris similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit), transcript variant 9 (LOC476015), mRNA Length = 2814 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| ||| ||||||||||| Sbjct: 1276 tcgtcatcactgctatcgtcatcactgtc 1248
>ref|XM_861001.1| PREDICTED: Canis familiaris similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit), transcript variant 8 (LOC476015), mRNA Length = 2592 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| ||| ||||||||||| Sbjct: 1054 tcgtcatcactgctatcgtcatcactgtc 1026
>ref|XM_860984.1| PREDICTED: Canis familiaris similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit), transcript variant 7 (LOC476015), mRNA Length = 2895 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| ||| ||||||||||| Sbjct: 1341 tcgtcatcactgctatcgtcatcactgtc 1313
>ref|XM_860966.1| PREDICTED: Canis familiaris similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit), transcript variant 6 (LOC476015), mRNA Length = 2333 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| ||| ||||||||||| Sbjct: 1341 tcgtcatcactgctatcgtcatcactgtc 1313
>ref|XM_860954.1| PREDICTED: Canis familiaris similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit), transcript variant 5 (LOC476015), mRNA Length = 2090 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| ||| ||||||||||| Sbjct: 1341 tcgtcatcactgctatcgtcatcactgtc 1313
>ref|XM_860910.1| PREDICTED: Canis familiaris similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit), transcript variant 2 (LOC476015), mRNA Length = 2509 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| ||| ||||||||||| Sbjct: 971 tcgtcatcactgctatcgtcatcactgtc 943
>ref|XM_533224.2| PREDICTED: Canis familiaris similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit), transcript variant 1 (LOC476015), mRNA Length = 2885 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| ||| ||||||||||| Sbjct: 1345 tcgtcatcactgctatcgtcatcactgtc 1317
>ref|XM_800022.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503395.30) partial mRNA Length = 1572 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 693 atcatcatcactgtcatcatc 713 ||||||||||||||||||||| Sbjct: 777 atcatcatcactgtcatcatc 757
>gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome 15, complete sequence Length = 197376 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 693 atcatcatcactgtcatcatc 713 ||||||||||||||||||||| Sbjct: 26619 atcatcatcactgtcatcatc 26639
>gb|AC109212.15| Mus musculus chromosome 9, clone RP23-329B5, complete sequence Length = 190469 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcat 712 ||||||||||||||||||||| Sbjct: 18290 catcatcatcactgtcatcat 18270
>gb|AC130203.4| Mus musculus BAC clone RP24-413E20 from chromosome 15, complete sequence Length = 182040 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatca 702 ||||||||||||||||||||| Sbjct: 54458 tcatcactgccatcatcatca 54478
>ref|XM_540478.2| PREDICTED: Canis familiaris similar to 5-azacytidine induced 1 isoform a (LOC483359), mRNA Length = 3422 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 514 ccagccgccctcttcttccca 534 ||||||||||||||||||||| Sbjct: 362 ccagccgccctcttcttccca 342
>gb|AC018688.9| Homo sapiens BAC clone RP11-462H3 from UL, complete sequence Length = 170204 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 681 gtcatcactgccatcatcatcactgtcatcatc 713 ||||||| |||||||||||||||| ||| |||| Sbjct: 23985 gtcatcattgccatcatcatcactatcaccatc 23953
>gb|BC007610.1| Homo sapiens splicing factor 3b, subunit 2, 145kDa, mRNA (cDNA clone MGC:15693 IMAGE:3351485), complete cds Length = 2108 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| |||||||||||||| Sbjct: 539 tcgtcatcactgctgtcatcatcactgtc 511
>gb|AC005692.1| Homo sapiens PAC clone RP5-842K16 from 7, complete sequence Length = 62536 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 693 atcatcatcactgtcatcatc 713 ||||||||||||||||||||| Sbjct: 27974 atcatcatcactgtcatcatc 27994
>gb|BC000401.2| Homo sapiens splicing factor 3b, subunit 2, 145kDa, mRNA (cDNA clone IMAGE:2822659), partial cds Length = 2864 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| |||||||||||||| Sbjct: 1315 tcgtcatcactgctgtcatcatcactgtc 1287
>gb|BC053577.1| Homo sapiens splicing factor 3b, subunit 2, 145kDa, mRNA (cDNA clone IMAGE:4478742), partial cds Length = 2639 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| |||||||||||||| Sbjct: 1323 tcgtcatcactgctgtcatcatcactgtc 1295
>emb|Z97192.2|HS29C18 Human DNA sequence from clone RP1-29C18 on chromosome 22, complete sequence Length = 143701 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 683 catcactgccatcatcatcac 703 ||||||||||||||||||||| Sbjct: 59303 catcactgccatcatcatcac 59283
>emb|AL596225.11| Human DNA sequence from clone RP11-30D7 on chromosome 1 Contains part of the gene for a novel protein (FLJ31862, FLJ22091, FLJ10597) and two CpG islands, complete sequence Length = 148750 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatca 702 ||||||||||||||||||||| Sbjct: 50483 tcatcactgccatcatcatca 50503
>ref|XM_503529.1| Yarrowia lipolytica CLIB122, YALI0E04136g predicted mRNA Length = 2880 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 559 tcttcctcctcgtcagagctgtcctcgtc 587 ||||||||||| |||||||| |||||||| Sbjct: 1085 tcttcctcctcatcagagctctcctcgtc 1057
>emb|AL355587.14| Human DNA sequence from clone RP11-561H23 on chromosome 10 Contains the 3' end of a novel gene (KIAA1136) (FLJ37801) and a CpG island, complete sequence Length = 130039 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 ttctggcctgatggtgttgca 471 ||||||||||||||||||||| Sbjct: 129130 ttctggcctgatggtgttgca 129110
>emb|AL162457.11| Human DNA sequence from clone RP11-429E11 on chromosome 20 Contains parts of the CDH4 gene for retinal cadherin 4 type 1 (R-cadherin), a novel gene, the gene for a novel protien (FLJ40547) and a CpG island, complete sequence Length = 130965 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 683 catcactgccatcatcatcac 703 ||||||||||||||||||||| Sbjct: 51503 catcactgccatcatcatcac 51483 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 683 catcactgccatcatcatcac 703 ||||||||||||||||||||| Sbjct: 51269 catcactgccatcatcatcac 51249
>emb|AL121910.26|HSDJ827L5 Human DNA sequence from clone RP5-827L5 on chromosome 20 Contains two putative novel genes, a CpG island, ESTs, STSs and GSSs, complete sequence Length = 141895 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatcat 712 ||||||||||||||||||||| Sbjct: 57432 catcatcatcactgtcatcat 57452
>emb|AL035692.10|HS329N18 Human DNA sequence from clone RP3-329N18 on chromosome 6q22.1-22.33, complete sequence Length = 84764 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcat 712 ||||||||||||||||||||| Sbjct: 73738 catcatcatcactgtcatcat 73718
>emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on chromosome 11 Contains a protease pseuodogene, complete sequence Length = 189417 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 693 atcatcatcactgtcatcatc 713 ||||||||||||||||||||| Sbjct: 93982 atcatcatcactgtcatcatc 94002
>gb|AC124254.5| Homo sapiens chromosome 18, clone RP11-176N18, complete sequence Length = 208155 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 677 cgtcgtcatcactgccatcatcatcactgtcatcatc 713 |||| |||||| | |||||||||||||| |||||||| Sbjct: 52906 cgtcatcatcattaccatcatcatcactatcatcatc 52870
>emb|CR858976.1| Pongo pygmaeus mRNA; cDNA DKFZp468D075 (from clone DKFZp468D075) Length = 2670 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcat 712 ||||||||||||||||||||| Sbjct: 1433 catcatcatcactgtcatcat 1413
>gb|AC007623.33| Homo sapiens 12 BAC RP11-608E13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87201 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatca 711 ||||||||||||||||||||| Sbjct: 83817 ccatcatcatcactgtcatca 83837
>gb|AC025278.5| Homo sapiens chromosome 19 clone RP11-1137G4, complete sequence Length = 135203 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 683 catcactgccatcatcatcactgtcatca 711 |||||||||||||| || ||||||||||| Sbjct: 87033 catcactgccatcaccaccactgtcatca 87005
>dbj|AB257214.1| Lotus japonicus LjPT3 mRNA for phosphate transporter, complete cds Length = 2041 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 685 tcactgccatcatcatcactg 705 ||||||||||||||||||||| Sbjct: 134 tcactgccatcatcatcactg 154
>ref|NM_006842.2| Homo sapiens splicing factor 3b, subunit 2, 145kDa (SF3B2), mRNA Length = 2902 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| |||||||||||||| Sbjct: 1356 tcgtcatcactgctgtcatcatcactgtc 1328
>gb|AC125394.27| Pan troglodytes clone rp43-45i3, complete sequence Length = 214480 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 681 gtcatcactgccatcatcatcactgtcatcatc 713 ||||||| |||||||||||||||| ||| |||| Sbjct: 22212 gtcatcattgccatcatcatcactatcaccatc 22244
>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence Length = 162877 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 ttctggcctgatggtgttgca 471 ||||||||||||||||||||| Sbjct: 161781 ttctggcctgatggtgttgca 161801
>gb|AC099731.5| Homo sapiens BAC clone RP11-1244M4 from 7, complete sequence Length = 216250 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgt 706 ||||||| ||||||||||||||||| Sbjct: 3038 tcatcaccgccatcatcatcactgt 3014
>gb|AC069427.10| Homo sapiens 3 BAC RP11-371I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 133858 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 689 tgccatcatcatcactgtcatcatc 713 ||||||||||| ||||||||||||| Sbjct: 116150 tgccatcatcaccactgtcatcatc 116174
>gb|AC092804.2| Homo sapiens chromosome 1 clone RP11-81E23, complete sequence Length = 161398 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatca 702 ||||||||||||||||||||| Sbjct: 57201 tcatcactgccatcatcatca 57181
>gb|BC022288.1| Homo sapiens calsequestrin 2 (cardiac muscle), mRNA (cDNA clone MGC:22461 IMAGE:4289141), complete cds Length = 2634 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatcat 712 ||||||||||||||||||||| Sbjct: 1362 catcatcatcactgtcatcat 1342
>gb|AC151718.5| Mus musculus BAC clone RP23-142J2 from chromosome 7, complete sequence Length = 213292 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 689 tgccatcatcatcactgtcatcatc 713 |||||||| |||||||||||||||| Sbjct: 96199 tgccatcaccatcactgtcatcatc 96175
>gb|AC008102.18| Homo sapiens chromosome 11 clone bac41i21 map 11q13, complete sequence Length = 126787 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| |||||||||||||| Sbjct: 111787 tcgtcatcactgctgtcatcatcactgtc 111815
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 gggcaagaacacatcaatcaaaata 204 ||||||||||||||||||| ||||| Sbjct: 6396101 gggcaagaacacatcaatctaaata 6396077
>gb|AC144411.2| Homo sapiens BAC clone GS1-146C24 from 7, complete sequence Length = 178059 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgt 706 ||||||| ||||||||||||||||| Sbjct: 57254 tcatcaccgccatcatcatcactgt 57230
>gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, complete sequence Length = 193220 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 taccttcttggccgggtgcgg 413 ||||||||||||||||||||| Sbjct: 181556 taccttcttggccgggtgcgg 181576
>gb|AC140998.5| Homo sapiens X BAC RP11-428I5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 90420 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 679 tcgtcatcactgccatcatcatcactgtcatca 711 |||||||||| |||||||||||||||||||| Sbjct: 69618 tcgtcatcaccatcatcatcatcactgtcatca 69650 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 679 tcgtcatcactgccatcatcatcactgtcatca 711 |||||||||| |||||||||||||||||||| Sbjct: 69579 tcgtcatcaccatcatcatcatcactgtcatca 69611 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 69670 catcatcatcactgtcatca 69689
>gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosome 15, complete sequence Length = 177253 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 693 atcatcatcactgtcatcatc 713 ||||||||||||||||||||| Sbjct: 115536 atcatcatcactgtcatcatc 115556
>gb|AC107033.3| Homo sapiens 12 BAC RP11-669N7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182000 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatca 702 ||||||||||||||||||||| Sbjct: 84333 tcatcactgccatcatcatca 84313
>gb|AC096555.1| Homo sapiens BAC clone RP11-78N15 from 2, complete sequence Length = 155942 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 694 tcatcatcactgtcatcatcc 714 ||||||||||||||||||||| Sbjct: 13182 tcatcatcactgtcatcatcc 13202
>emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on chromosome 2, complete sequence Length = 202001 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatca 711 ||||||||||||||||||||| Sbjct: 157175 ccatcatcatcactgtcatca 157155
>gb|AC007221.2|AC007221 Homo sapiens chromosome 16 clone RPCI-11_418I22, complete sequence Length = 230696 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 693 atcatcatcactgtcatcatc 713 ||||||||||||||||||||| Sbjct: 62047 atcatcatcactgtcatcatc 62067
>gb|AC156789.1| Homo sapiens chromosome 9 clone WI2-2903G16, complete sequence Length = 30914 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 685 tcactgccatcatcatcactgtcatcatc 713 |||||||||||| |||||| ||||||||| Sbjct: 6062 tcactgccatcaacatcaccgtcatcatc 6090
>dbj|AP006287.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-1167A19, complete sequence Length = 208726 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| |||||||||||||| Sbjct: 174585 tcgtcatcactgctgtcatcatcactgtc 174557
>dbj|AP002387.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-660L16, complete sequence Length = 170523 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 681 gtcatcactgccatcatcatcactgtcatcatc 713 ||||||| |||||||||||||| ||||||||| Sbjct: 32844 gtcatcattgccatcatcatcatagtcatcatc 32812
>emb|BX537771.1|HSM805857 Homo sapiens mRNA; cDNA DKFZp781L0540 (from clone DKFZp781L0540) Length = 2585 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| |||||||||||||| Sbjct: 1029 tcgtcatcactgctgtcatcatcactgtc 1001
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 gggcaagaacacatcaatcaaaata 204 ||||||||||||||||||| ||||| Sbjct: 6462568 gggcaagaacacatcaatctaaata 6462544
>emb|AL669970.10| Human DNA sequence from clone RP11-473E2 on chromosome 9, complete sequence Length = 169247 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 685 tcactgccatcatcatcactgtcatcatc 713 |||||||||||| |||||| ||||||||| Sbjct: 1592 tcactgccatcaacatcaccgtcatcatc 1564
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 559 tcttcctcctcgtcagagctgtcctcgtc 587 ||||||||||| |||||||| |||||||| Sbjct: 462235 tcttcctcctcatcagagctctcctcgtc 462263
>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence Length = 209249 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatca 711 ||||||||||||||||||||| Sbjct: 201901 ccatcatcatcactgtcatca 201921
>gb|U41371.1|HSU41371 Human spliceosome associated protein (SAP 145) mRNA, complete cds Length = 2839 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatcatcactgtc 707 ||||||||||||| |||||||||||||| Sbjct: 1295 tcgtcatcactgctgtcatcatcactgtc 1267
>gb|BC107643.1| Danio rerio hypothetical protein LOC553506, mRNA (cDNA clone IMAGE:7402558), partial cds Length = 1184 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 657 ccatcatcatcactgtcatc 638
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence Length = 253151 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 ttcttcttcctcctcgtcag 574 |||||||||||||||||||| Sbjct: 168831 ttcttcttcctcctcgtcag 168850
>gb|AF429315.1| Homo sapiens junctophilin 3 (JPH3) gene, partial cds Length = 125020 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 42686 catcatcatcactgtcatca 42667
>gb|AC102714.16| Mus musculus chromosome 5, clone RP24-298D13, complete sequence Length = 165774 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 aacccagccagccaaccaac 235 |||||||||||||||||||| Sbjct: 119896 aacccagccagccaaccaac 119915
>gb|AC108318.8| Rattus norvegicus 2 BAC CH230-256E18 (Children's Hospital Oakland Research Institute) complete sequence Length = 210322 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 ||||||| ||||||||||||| ||||||||| Sbjct: 33486 tcatcaccaccatcatcatcaccgtcatcatc 33455
>ref|XM_457407.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B10659g) partial mRNA Length = 1086 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 476 catcatcatcactgtcatca 495
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 679 tcgtcatcactgccatcatcatca 702 |||||||||||| ||||||||||| Sbjct: 180543 tcgtcatcactgtcatcatcatca 180566
>gb|AF252828.5| Homo sapiens chromosome 8 clone RP11-245A18 map q24.13, complete sequence Length = 146712 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 693 atcatcatcactgtcatcat 712 |||||||||||||||||||| Sbjct: 68409 atcatcatcactgtcatcat 68390
>gb|AF216672.5| Homo sapiens chromosome 8 clone RP11-293H22 map q24.13, complete sequence Length = 174030 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 693 atcatcatcactgtcatcat 712 |||||||||||||||||||| Sbjct: 133412 atcatcatcactgtcatcat 133393
>gb|AC120383.7| Mus musculus chromosome 12, clone RP24-273A7, complete sequence Length = 216796 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 114159 catcatcatcactgtcatca 114178
>gb|AC123665.9| Mus musculus chromosome 14, clone RP23-226A4, complete sequence Length = 241576 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 132190 catcatcatcactgtcatca 132171
>gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosome 3, complete sequence Length = 230133 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 683 catcactgccatcatcatca 702 |||||||||||||||||||| Sbjct: 52319 catcactgccatcatcatca 52300
>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence Length = 173460 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 679 tcgtcatcactgccatcatcatca 702 |||||||||||| ||||||||||| Sbjct: 2208 tcgtcatcactgtcatcatcatca 2231
>ref|XM_851441.1| PREDICTED: Canis familiaris similar to General transcription factor 3C polypeptide 3 (Transcription factor IIIC-gamma subunit) (TF3C-gamma) (TFIIIC 102 kDa subunit) (TFIIIC102), transcript variant 3 (LOC478851), mRNA Length = 2726 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 ggtgtttcttcttcctcctc 569 |||||||||||||||||||| Sbjct: 323 ggtgtttcttcttcctcctc 304
>ref|XM_851398.1| PREDICTED: Canis familiaris similar to General transcription factor 3C polypeptide 3 (Transcription factor IIIC-gamma subunit) (TF3C-gamma) (TFIIIC 102 kDa subunit) (TFIIIC102), transcript variant 2 (LOC478851), mRNA Length = 1286 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 ggtgtttcttcttcctcctc 569 |||||||||||||||||||| Sbjct: 382 ggtgtttcttcttcctcctc 363
>ref|XM_536013.2| PREDICTED: Canis familiaris similar to General transcription factor 3C polypeptide 3 (Transcription factor IIIC-gamma subunit) (TF3C-gamma) (TFIIIC 102 kDa subunit) (TFIIIC102), transcript variant 1 (LOC478851), mRNA Length = 3455 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 ggtgtttcttcttcctcctc 569 |||||||||||||||||||| Sbjct: 382 ggtgtttcttcttcctcctc 363
>gb|AC121302.7| Mus musculus chromosome 13, clone RP23-163B12, complete sequence Length = 190256 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcat 709 |||||| |||||||||||||| |||||| Sbjct: 51540 tcatcattgccatcatcatcattgtcat 51513
>ref|XM_855959.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 7 (LOC477400), mRNA Length = 6511 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 |||||||||||||||||| ||||| Sbjct: 4131 gccatcatcatcactgtcttcatc 4108
>ref|XM_534596.2| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 1 (LOC477400), mRNA Length = 6578 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 |||||||||||||||||| ||||| Sbjct: 4198 gccatcatcatcactgtcttcatc 4175
>ref|XM_855907.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 6 (LOC477400), mRNA Length = 6583 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 |||||||||||||||||| ||||| Sbjct: 4203 gccatcatcatcactgtcttcatc 4180
>ref|XM_845128.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 2 (LOC477400), mRNA Length = 6479 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 |||||||||||||||||| ||||| Sbjct: 4099 gccatcatcatcactgtcttcatc 4076
>ref|XM_855844.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 5 (LOC477400), mRNA Length = 6502 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 |||||||||||||||||| ||||| Sbjct: 4122 gccatcatcatcactgtcttcatc 4099
>ref|XM_855814.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 4 (LOC477400), mRNA Length = 6688 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 |||||||||||||||||| ||||| Sbjct: 4308 gccatcatcatcactgtcttcatc 4285
>ref|XM_385572.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05396.1) partial mRNA Length = 1407 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 694 tcatcatcactgtcatcatc 713 |||||||||||||||||||| Sbjct: 653 tcatcatcactgtcatcatc 634
>gb|AC092720.4| Homo sapiens chromosome 16 clone RP11-482M8, complete sequence Length = 169214 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||||||| |||||||||||||| ||| |||| Sbjct: 127640 tcatcactaccatcatcatcactatcaccatc 127671 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 127617 catcatcatcactgtcatca 127636
>ref|XM_444847.1| Candida glabrata CBS138 hypothetical protein (CAGL0A01870g) partial mRNA Length = 2385 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 tcactatcatcagaatcatc 632 |||||||||||||||||||| Sbjct: 896 tcactatcatcagaatcatc 877
>gb|AC122489.3| Mus musculus BAC clone RP24-386H10 from chromosome 13, complete sequence Length = 191710 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcat 709 |||||| |||||||||||||| |||||| Sbjct: 82126 tcatcattgccatcatcatcattgtcat 82099
>ref|XM_814119.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510431.260) partial mRNA Length = 1992 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ttcttcttcctcctcgtcag 574 |||||||||||||||||||| Sbjct: 474 ttcttcttcctcctcgtcag 455
>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence Length = 223991 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 664 tcatcttcgctgtcgtcgtcatca 687 ||||| |||||||||||||||||| Sbjct: 218982 tcatcgtcgctgtcgtcgtcatca 219005
>ref|XM_759669.1| Theileria parva strain Muguga hypothetical protein (TP02_0966) partial mRNA Length = 999 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 694 tcatcatcactgtcatcatc 713 |||||||||||||||||||| Sbjct: 587 tcatcatcactgtcatcatc 568
>gb|AC136729.7| Mus musculus chromosome 3, clone RP23-175I24, complete sequence Length = 216602 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 182163 catcatcatcactgtcatca 182182
>ref|XM_761653.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_1225) partial mRNA Length = 1305 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 694 tcatcatcactgtcatcatc 713 |||||||||||||||||||| Sbjct: 113 tcatcatcactgtcatcatc 94
>gb|AC160976.2| Mus musculus BAC clone RP24-67M24 from chromosome 9, complete sequence Length = 184288 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 45261 catcatcatcactgtcatca 45280
>gb|BC115111.1| Danio rerio cDNA clone IMAGE:8123804, partial cds Length = 1053 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 640 ccatcatcatcactgtcatc 621
>emb|BX510357.2| Human DNA sequence from clone RP11-722J12 on chromosome 1, complete sequence Length = 6340 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 ||||||||||||||||||| |||| Sbjct: 4707 gccatcatcatcactgtcaccatc 4684
>emb|BX119919.5| Human DNA sequence from clone RP11-987D21 on chromosome X, complete sequence Length = 55442 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 ||||||||||||||| |||||||| Sbjct: 23116 gccatcatcatcactatcatcatc 23093
>emb|AL592436.7| Human DNA sequence from clone RP11-710N8 on chromosome 1 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene and a CCR4-NOT transcription complex, subunit 7 (CNOT7) pseudogene, complete sequence Length = 96782 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 ||||||||||||||||||| |||| Sbjct: 367 gccatcatcatcactgtcaccatc 344
>emb|AL449283.13| Human DNA sequence from clone RP11-386I23 on chromosome 1 Contains a GAJ protein pseudogene, complete sequence Length = 52920 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 cttcttgtcagcaacagggg 499 |||||||||||||||||||| Sbjct: 41117 cttcttgtcagcaacagggg 41136
>emb|AL449403.11| Human DNA sequence from clone RP11-569G13 on chromosome 9 Contains a eukaryotic translation initiation factor 4B (EIF4B) pseudogene and part of a novel gene, complete sequence Length = 173916 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||||| || ||||||||||||| |||||||| Sbjct: 127695 tcatcattgtcatcatcatcactatcatcatc 127726
>emb|AL356986.11| Human DNA sequence from clone RP11-395N6 on chromosome 1 Contains the 5' end of a known gene (FLJ10276), a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, a novel pseudogene, the 5' end of the ZBTB8 gene for zinc finger and BTB domain containing 8 and five CpG islands, complete sequence Length = 98390 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||||| | |||||||||||||| |||||||| Sbjct: 79410 tcatcagtaccatcatcatcactatcatcatc 79441
>emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chromosome 10 Contains two CpG islands, complete sequence Length = 131112 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 tcttgggtgtttcttcttcc 564 |||||||||||||||||||| Sbjct: 56659 tcttgggtgtttcttcttcc 56640
>emb|AL022310.1|HS395P12 Human DNA sequence from clone RP3-395P12 on chromosome 1q24-25 Contains a glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)(GOT2) pseudogene, a novel gene and the TNFSF4 gene for tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kDa), complete sequence Length = 147724 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tcccttccctcaggctcagg 107 |||||||||||||||||||| Sbjct: 53007 tcccttccctcaggctcagg 53026
>gb|AC142229.2| Homo sapiens fosmid clone XXFOS-800764H6 from 7, complete sequence Length = 38724 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||||||| ||||||||||||| |||||||| Sbjct: 25531 tcatcactatcatcatcatcactatcatcatc 25562
>emb|BX057455.1|CNS09GHV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC37BF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 793 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 cttgggtgtttcttcttcctcctc 569 |||||| ||||||||||||||||| Sbjct: 755 cttgggcgtttcttcttcctcctc 732
>emb|BX047491.1|CNS098T3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC21DD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 839 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 cttgggtgtttcttcttcctcctc 569 |||||| ||||||||||||||||| Sbjct: 623 cttgggcgtttcttcttcctcctc 600
>emb|BX039658.1|CNS092RI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10AC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 989 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 cttgggtgtttcttcttcctcctc 569 |||||| ||||||||||||||||| Sbjct: 773 cttgggcgtttcttcttcctcctc 750
>emb|BX021020.1|CNS08ODS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA31AD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 233 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 cttgggtgtttcttcttcctcctc 569 |||||| ||||||||||||||||| Sbjct: 69 cttgggcgtttcttcttcctcctc 46
>emb|Z81312.1|SPAC1F8 S.pombe chromosome I cosmid c1F8 Length = 26380 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactg 705 |||||||||| ||||||||||||| Sbjct: 15445 tcatcactgctatcatcatcactg 15422
>ref|XM_794734.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC575561 (LOC575561), partial mRNA Length = 480 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 690 gccatcatcatcactgtcatcatc 713 ||||||||||||| |||||||||| Sbjct: 198 gccatcatcatcattgtcatcatc 175
>emb|Y00762.1|HSACHRA Human mRNA for muscle acetylcholine receptor alpha-subunit Length = 1667 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 971 ccatcatcatcactgtcatc 990
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 826017 catcatcatcactgtcatca 826036
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 tcactatcatcagaatcatc 632 |||||||||||||||||||| Sbjct: 188132 tcactatcatcagaatcatc 188151
>gb|AC125243.4| Homo sapiens BAC clone RP13-611E1 from 7, complete sequence Length = 33304 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||||||| ||||||||||||| |||||||| Sbjct: 15702 tcatcactatcatcatcatcactatcatcatc 15733
>emb|CR381633.6| Zebrafish DNA sequence from clone CH211-230M9 in linkage group 14, complete sequence Length = 163910 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 2103 catcatcatcactgtcatca 2122
>gb|AC090753.10| Homo sapiens chromosome 8, clone RP11-245A18, complete sequence Length = 146552 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 693 atcatcatcactgtcatcat 712 |||||||||||||||||||| Sbjct: 78305 atcatcatcactgtcatcat 78324
>gb|AC091304.15| Homo sapiens chromosome 15, clone RP11-483E23, complete sequence Length = 179218 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 accttcttggccgggtgcgg 413 |||||||||||||||||||| Sbjct: 132729 accttcttggccgggtgcgg 132710
>dbj|BS000664.2| Pan troglodytes chromosome Y clone: PTBY-007G10, complete sequence Length = 89389 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatcatcc 714 |||||||||||||||||| ||||| Sbjct: 24477 ccatcatcatcactgtcagcatcc 24500
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatcatcc 714 |||||||||||||||||| ||||| Sbjct: 13896906 ccatcatcatcactgtcagcatcc 13896883
>dbj|AK127194.1| Homo sapiens cDNA FLJ45259 fis, clone BRHIP2020695 Length = 3056 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tgcaattttggccttcttgt 487 |||||||||||||||||||| Sbjct: 2265 tgcaattttggccttcttgt 2246
>gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence Length = 157944 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 134807 catcatcatcactgtcatca 134788
>gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193035 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 693 atcatcatcactgtcatcat 712 |||||||||||||||||||| Sbjct: 16409 atcatcatcactgtcatcat 16390
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 683 catcactgccatcatcatca 702 |||||||||||||||||||| Sbjct: 161218 catcactgccatcatcatca 161237 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 683 catcactgccatcatcatca 702 |||||||||||||||||||| Sbjct: 160915 catcactgccatcatcatca 160934
>dbj|AK001101.1| Homo sapiens cDNA FLJ10239 fis, clone HEMBB1000589 Length = 1622 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 693 atcatcatcactgtcatcat 712 |||||||||||||||||||| Sbjct: 28 atcatcatcactgtcatcat 9
>gb|AY308154.1| Paratya australiensis isolate GIN1 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 456 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aaccaatcaatttccgaacc 33 |||||||||||||||||||| Sbjct: 87 aaccaatcaatttccgaacc 68
>gb|AY308147.1| Paratya australiensis isolate GIN2 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 456 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aaccaatcaatttccgaacc 33 |||||||||||||||||||| Sbjct: 87 aaccaatcaatttccgaacc 68
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 679 tcgtcatcactgccatcatc 698 |||||||||||||||||||| Sbjct: 4361872 tcgtcatcactgccatcatc 4361853
>gb|AC104002.5| Homo sapiens, clone RP11-100M12, complete sequence Length = 169822 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 690 gccatcatcatcactgtcatcatc 713 |||||||||||||| ||||||||| Sbjct: 97976 gccatcatcatcacggtcatcatc 97999
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 683 catcactgccatcatcatca 702 |||||||||||||||||||| Sbjct: 1063805 catcactgccatcatcatca 1063824
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 683 catcactgccatcatcatca 702 |||||||||||||||||||| Sbjct: 3983886 catcactgccatcatcatca 3983867
>gb|AC010536.8| Homo sapiens chromosome 16 clone RP11-278A23, complete sequence Length = 208236 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 175863 catcatcatcactgtcatca 175844 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||||||| |||||||||||||| ||| |||| Sbjct: 175840 tcatcactaccatcatcatcactatcaccatc 175809
>gb|AC104945.4| Homo sapiens chromosome 8, clone RP11-384L9, complete sequence Length = 181328 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 67982 catcatcatcactgtcatca 67963
>gb|AC090531.18| Homo sapiens 12q BAC RP11-413B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 204468 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 679 tcgtcatcactgccatcatcatca 702 |||| ||||||||||||||||||| Sbjct: 96497 tcgtaatcactgccatcatcatca 96520
>gb|AC008619.7| Homo sapiens chromosome 5 clone CTB-147C13, complete sequence Length = 91048 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||||| ||||||||||||||| |||||||| Sbjct: 15901 tcatcattgccatcatcatcaccatcatcatc 15932 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||||| ||||||||||||||| |||||||| Sbjct: 15832 tcatcattgccatcatcatcaccatcatcatc 15863
>ref|XM_698265.1| PREDICTED: Danio rerio hypothetical protein LOC553506, transcript variant 1 (LOC553506), mRNA Length = 2157 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 447 ccatcatcatcactgtcatc 428
>ref|XM_691004.1| PREDICTED: Danio rerio similar to Retinitis pigmentosa 1-like 1 protein (LOC567707), mRNA Length = 9429 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 tcctcatcaccctcctcact 617 |||||||||||||||||||| Sbjct: 6230 tcctcatcaccctcctcact 6211
>ref|XM_688928.1| PREDICTED: Danio rerio similar to thyroid hormone receptor interactor 12 (LOC565660), mRNA Length = 6249 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatcatcc 714 ||||||||||||||||| |||||| Sbjct: 3035 ccatcatcatcactgtcttcatcc 3012
>ref|XM_688190.1| PREDICTED: Danio rerio similar to thyroid hormone receptor interactor 12 (LOC564866), partial mRNA Length = 6033 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatcatcc 714 ||||||||||||||||| |||||| Sbjct: 2815 ccatcatcatcactgtcttcatcc 2792
>ref|XM_691017.1| PREDICTED: Danio rerio similar to thyroid hormone receptor interactor 12 (LOC567717), mRNA Length = 3610 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatcatcc 714 ||||||||||||||||| |||||| Sbjct: 395 ccatcatcatcactgtcttcatcc 372
>ref|NM_001039523.1| Homo sapiens cholinergic receptor, nicotinic, alpha 1 (muscle) (CHRNA1), transcript variant 1, mRNA Length = 2040 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 1057 ccatcatcatcactgtcatc 1076
>ref|NM_000079.2| Homo sapiens cholinergic receptor, nicotinic, alpha 1 (muscle) (CHRNA1), transcript variant 2, mRNA Length = 1965 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 982 ccatcatcatcactgtcatc 1001
>gb|AC146250.5| Pan troglodytes BAC clone CH251-148B21 from chromosome y, complete sequence Length = 175351 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatcatcc 714 |||||||||||||||||| ||||| Sbjct: 156963 ccatcatcatcactgtcagcatcc 156986
>gb|S77094.1| nicotinic acetylcholine receptor alpha subunit|AChR alpha subunit [human, thymic carcinoma, myasthenia gravis-associated thymoma patient 1494/88, mRNA Partial, 1676 nt] Length = 1676 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 971 ccatcatcatcactgtcatc 990
>dbj|AB179400.1| Macaca fascicularis testis cDNA clone: QtsA-19276, similar to human KIAA0776 (KIAA0776), mRNA, RefSeq: NM_015323.2 Length = 2904 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 694 tcatcatcactgtcatcatc 713 |||||||||||||||||||| Sbjct: 1422 tcatcatcactgtcatcatc 1403
>gb|AC154336.2| Mus musculus BAC clone RP23-252B13 from chromosome 9, complete sequence Length = 184358 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 174239 catcatcatcactgtcatca 174220
>ref|NM_001018194.1| Schizosaccharomyces pombe 972h- sexual differentiation process protein isp3; meiotic expression upregulated (SPAC1F8.05), partial mRNA Length = 549 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactg 705 |||||||||| ||||||||||||| Sbjct: 227 tcatcactgctatcatcatcactg 204
>ref|NM_072421.2| Caenorhabditis elegans F09G2.4 (F09G2.4) mRNA, complete cds Length = 2595 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 1327 catcatcatcactgtcatca 1308
>gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, complete sequence Length = 228458 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 aacccagccagccaaccaac 235 |||||||||||||||||||| Sbjct: 219039 aacccagccagccaaccaac 219058
>dbj|AK078512.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820427H12 product:lysyl oxidase-like, full insert sequence Length = 3147 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 2619 catcatcatcactgtcatca 2638
>gb|BC093251.1| Danio rerio hypothetical protein LOC553506, mRNA (cDNA clone IMAGE:7432794), partial cds Length = 976 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 452 ccatcatcatcactgtcatc 433
>emb|AL116570.1|CNS01DAA Botrytis cinerea strain T4 cDNA library Length = 636 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 676 tcgtcgtcatcactgccatcatca 699 ||||||||||||||| |||||||| Sbjct: 416 tcgtcgtcatcactgtcatcatca 393
>emb|BX255887.8| Zebrafish DNA sequence from clone CH211-272F3 in linkage group 18, complete sequence Length = 158610 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatcatcc 714 ||||||||||||||||| |||||| Sbjct: 138380 ccatcatcatcactgtcttcatcc 138403
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caagaacacatcaatcaaaa 202 |||||||||||||||||||| Sbjct: 38831836 caagaacacatcaatcaaaa 38831855
>gb|AC079176.15| Homo sapiens X BAC RP11-325D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186278 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatcatcc 714 ||||||||||||| |||||||||| Sbjct: 65905 ccatcatcatcaccgtcatcatcc 65882
>gb|AC141889.4| Mus musculus BAC clone RP23-434P15 from chromosome 3, complete sequence Length = 186264 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 683 catcactgccatcatcatca 702 |||||||||||||||||||| Sbjct: 118911 catcactgccatcatcatca 118892
>gb|AC018890.13| Homo sapiens BAC clone RP11-493G24 from 2, complete sequence Length = 173965 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 50236 ccatcatcatcactgtcatc 50217
>gb|AC026239.4|AC026239 Homo sapiens chromosome 7 clone RP11-335B7, complete sequence Length = 153619 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 683 catcactgccatcatcatca 702 |||||||||||||||||||| Sbjct: 20275 catcactgccatcatcatca 20294 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 683 catcactgccatcatcatca 702 |||||||||||||||||||| Sbjct: 19972 catcactgccatcatcatca 19991
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete sequence Length = 180092 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 683 catcactgccatcatcatca 702 |||||||||||||||||||| Sbjct: 15783 catcactgccatcatcatca 15764
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caagaacacatcaatcaaaa 202 |||||||||||||||||||| Sbjct: 104718 caagaacacatcaatcaaaa 104737
>gb|AC128708.8| Homo sapiens 12 BAC RP11-714L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 102748 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 682 tcatcactgccatcatcatcactgtcatcatc 713 |||| |||| ||||||||||| |||||||||| Sbjct: 11589 tcattactgtcatcatcatcattgtcatcatc 11558
>gb|AC073834.6| Homo sapiens BAC clone RP11-250N10 from 2, complete sequence Length = 172415 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tgcaattttggccttcttgt 487 |||||||||||||||||||| Sbjct: 117138 tgcaattttggccttcttgt 117157
>gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y, complete sequence Length = 180019 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 695 catcatcactgtcatcatcc 714 |||||||||||||||||||| Sbjct: 108435 catcatcactgtcatcatcc 108454
>gb|AC103893.2| Papio anubis clone RP41-216H1, complete sequence Length = 155255 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ccctcttcttcccagtctct 540 |||||||||||||||||||| Sbjct: 36080 ccctcttcttcccagtctct 36061
>gb|AF026215.1| Caenorhabditis elegans cosmid F09G2, complete sequence Length = 41087 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 catcatcatcactgtcatca 711 |||||||||||||||||||| Sbjct: 16232 catcatcatcactgtcatca 16213
>gb|AC137587.2| Homo sapiens 3 BAC RP13-861G15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131999 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 693 atcatcatcactgtcatcat 712 |||||||||||||||||||| Sbjct: 4456 atcatcatcactgtcatcat 4475
>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191463 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 694 tcatcatcactgtcatcatc 713 |||||||||||||||||||| Sbjct: 69413 tcatcatcactgtcatcatc 69432
>gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosome 7, complete sequence Length = 195204 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ccagcgtaactgatagtctc 176 |||||||||||||||||||| Sbjct: 159773 ccagcgtaactgatagtctc 159792
>gb|AF254072.1|AF254072 Zea mays histone deacetylase 2 isoform b mRNA, complete cds Length = 912 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 cccttcttgtcacctgttttctgg 456 ||||||||| |||||||||||||| Sbjct: 734 cccttcttgccacctgttttctgg 711
>emb|BX255879.6| Zebrafish DNA sequence from clone CH211-232P17 in linkage group 18, complete sequence Length = 173755 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatcatcc 714 ||||||||||||||||| |||||| Sbjct: 150669 ccatcatcatcactgtcttcatcc 150692
>gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, complete sequence Length = 176340 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 acatagataatagataggta 146 |||||||||||||||||||| Sbjct: 35152 acatagataatagataggta 35133
>gb|AC145294.4| Mus musculus BAC clone RP23-88B16 from 7, complete sequence Length = 217265 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ccagcgtaactgatagtctc 176 |||||||||||||||||||| Sbjct: 89435 ccagcgtaactgatagtctc 89454
>emb|BX842684.4| Zebrafish DNA sequence from clone DKEY-33I22 in linkage group 20, complete sequence Length = 140982 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 tcctcatcaccctcctcact 617 |||||||||||||||||||| Sbjct: 63510 tcctcatcaccctcctcact 63491
>gb|AY104912.1| Zea mays PCO120143 mRNA sequence Length = 1305 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 cccttcttgtcacctgttttctgg 456 ||||||||| |||||||||||||| Sbjct: 823 cccttcttgccacctgttttctgg 800
>emb|CR352232.20| Zebrafish DNA sequence from clone DKEY-3L8 in linkage group 23, complete sequence Length = 206478 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 691 ccatcatcatcactgtcatc 710 |||||||||||||||||||| Sbjct: 165150 ccatcatcatcactgtcatc 165169
>emb|CR628386.8| Zebrafish DNA sequence from clone CH211-241O7 in linkage group 10, complete sequence Length = 148044 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcaacccagccagccaacca 233 |||||||||||||||||||| Sbjct: 140787 tcaacccagccagccaacca 140768 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,537,089 Number of Sequences: 3902068 Number of extensions: 6537089 Number of successful extensions: 205044 Number of sequences better than 10.0: 274 Number of HSP's better than 10.0 without gapping: 274 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 203404 Number of HSP's gapped (non-prelim): 1640 length of query: 714 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 691 effective length of database: 17,143,297,704 effective search space: 11846018713464 effective search space used: 11846018713464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
