ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1o23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107199.1| Zea mays PCO111621 mRNA sequence 347 3e-92
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
3dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4ref|NM_111004.1| Arabidopsis thaliana transferase AT3G01380 mRNA... 92 3e-15
5gb|AC010870.6|ATAC010870 Arabidopsis thaliana chromosome III BAC... 86 2e-13
6emb|AL731866.8| Mouse DNA sequence from clone RP23-37F22 on chro... 44 0.60
7gb|AC112222.2| Homo sapiens chromosome 3 clone RP11-114A11, comp... 44 0.60
8gb|AC112515.4| Homo sapiens chromosome 3 clone RP11-697B5, compl... 44 0.60
9emb|AL713840.1|CNS07YOU Mus musculus chromosome 11 region in the... 44 0.60
10gb|AC166709.9| Mus musculus chromosome 1, clone RP23-406B10, com... 42 2.4
11gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, com... 42 2.4
12gb|AC154655.2| Mus musculus BAC clone RP24-263O11 from chromosom... 42 2.4
13gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome... 42 2.4
14gb|AF282397.1|AF282397 Cucumis sativus clone K34 mitochondrial g... 42 2.4
15dbj|AK036119.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 42 2.4
16gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome... 42 2.4
17gb|AC167439.2| Mus musculus BAC clone RP23-461M17 from chromosom... 40 9.4
18gb|AY133923.1| Uncultured Methanomicrobiaceae archaeon clone LDS... 40 9.4
19gb|DP000017.1| Sus scrofa target 1 genomic scaffold 40 9.4
20gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, co... 40 9.4
21gb|AC113283.13| Mus musculus chromosome 3, clone RP23-397I12, co... 40 9.4
22gb|AC137156.3| Mus musculus BAC clone RP23-118K10 from chromosom... 40 9.4
23gb|AC089994.2| Felis catus clone RP86-181L4, complete sequence 40 9.4
24gb|AC145590.3| Mus musculus BAC clone RP24-175D4 from chromosome... 40 9.4
25emb|AL627089.13| Mouse DNA sequence from clone RP23-107H23 on ch... 40 9.4
26gb|AC145868.2| Pan troglodytes BAC clone RP43-39F11 from 7, comp... 40 9.4
27gb|AC125095.3| Mus musculus BAC clone RP24-179H12 from chromosom... 40 9.4
28gb|AC123061.4| Mus musculus BAC clone RP23-216H22 from 14, compl... 40 9.4
29gb|AC123870.3| Mus musculus BAC clone RP23-246A19 from 15, compl... 40 9.4
30ref|XM_724843.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.4
31ref|XM_735209.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 9.4
32gb|AC074000.8| Homo sapiens BAC clone CTD-2023N18 from 7, comple... 40 9.4
33gb|AC133904.9| Mus musculus chromosome 19, clone RP24-143J12, co... 40 9.4
34gb|AC158778.4| Mus musculus chromosome 19, clone RP24-90P13, com... 40 9.4
35emb|Z98172.1|HS234H5 Human DNA sequence from clone RP1-234H5 on ... 40 9.4
36emb|Z97632.3|HS196E23 Human DNA sequence from clone RP1-196E23 o... 40 9.4
37emb|AL137839.6| Human DNA sequence from clone RP3-471C18 on chro... 40 9.4
38emb|AL022726.1|HS625H18 Human DNA sequence from clone RP4-625H18... 40 9.4
39gb|AC116715.22| Mus musculus chromosome 5, clone RP23-129N14, co... 40 9.4
40gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, compl... 40 9.4
41gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, com... 40 9.4
42gb|AC103819.3| Homo sapiens chromosome 8, clone CTD-3056O22, com... 40 9.4
43emb|BX548033.9| Zebrafish DNA sequence from clone CH211-232E6 in... 40 9.4
44emb|CR847517.1| Human DNA sequence from clone XX-NCIH2171_9D08, ... 40 9.4
45gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence 40 9.4
46gb|AC137066.23| Pan troglodytes clone ptb-31f12, complete sequence 40 9.4
47gb|AC112213.2| Homo sapiens chromosome 3 clone RP11-223D18, comp... 40 9.4
48gb|AC099783.2| Homo sapiens chromosome 3 clone RP11-115I24, comp... 40 9.4
49gb|AC010545.9| Homo sapiens chromosome 16 clone RP11-449H11, com... 40 9.4
50gb|AC092799.2| Homo sapiens chromosome 1 clone RP11-5F19, comple... 40 9.4
51gb|AC066613.7|AC066613 Homo sapiens chromosome 15 clone RP11-707... 40 9.4
52gb|AC000082.4| Homo sapiens Chromosome 22q11.2 Cosmid Clone 59f ... 40 9.4
53gb|AC000070.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 105a... 40 9.4
54gb|AC084732.1|AC084732 Homo sapiens BAC clone RP11-368G2 from 4,... 40 9.4
55gb|AC097484.3| Homo sapiens BAC clone RP11-147K6 from 4, complet... 40 9.4
56gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, compl... 40 9.4
57gb|AC154462.2| Mus musculus BAC clone RP24-165F12 from chromosom... 40 9.4
58gb|AC020891.8|AC020891 Homo sapiens chromosome 15 clone RP11-108... 40 9.4
59gb|AC093308.4| Homo sapiens chromosome 5 clone RP11-96B3, comple... 40 9.4
60gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Canc... 40 9.4
61gb|AC153102.3| Sus scrofa clone RP44-33N10, complete sequence 40 9.4
62emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chr... 40 9.4
63emb|AL929510.17| Mouse DNA sequence from clone RP23-241O13 on ch... 40 9.4
64emb|BX908747.25| Zebrafish DNA sequence from clone DKEY-58J15 in... 40 9.4
65emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on ch... 40 9.4
66gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 9.4
67emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 9.4
68gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 40 9.4
69gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 9.4
70emb|AL672266.9| Mouse DNA sequence from clone RP23-342A10 on chr... 40 9.4
71gb|M95694.1|MUSR55SQ Mouse microsatellite 40 9.4
72gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 9.4
73gb|AF315312.2| Homo sapiens chromosome 8 clone RP1-80K22 map 8q2... 40 9.4 
>gb|AY107199.1| Zea mays PCO111621 mRNA sequence
          Length = 984

 Score =  347 bits (175), Expect = 3e-92
 Identities = 413/491 (84%), Gaps = 1/491 (0%)
 Strand = Plus / Minus

                                                                       
Query: 190 acataaattttcgtgaggtcaattgccgagacgagacttcgatatcttttgtgtatatgt 249
           |||||| ||| |||| ||| | |||||||||||||||    |||||| | |||||||| |
Sbjct: 745 acataactttccgtgcggttagttgccgagacgagaccaaaatatctctagtgtatatat 686

                                                                       
Query: 250 ttgtgagtgcaaaaagcagcaacacgaagactacttgcgcacttacaattccaaaatggc 309
           | ||||| ||||| |||||||| |||||||| ||||| || || || ||||| |||||||
Sbjct: 685 tcgtgagggcaaagagcagcaaaacgaagaccacttgggcgctcactattccgaaatggc 626

                                                                       
Query: 310 taatgctgttgccaatctccatccagctccctgtgttttggaccaggaaaaagaaatgaa 369
           ||||||||||||| || |||||||| || || || ||  | |||||||||||||||||||
Sbjct: 625 taatgctgttgccgatttccatccaactaccggtattccgtaccaggaaaaagaaatgaa 566

                                                                       
Query: 370 ttgtcatcacatctgaaagcagtattacaagaaaataacaaccgatacgtggaatcctta 429
           | ||||| |||||||||||||||||||||||||||||||| || |  ||||| || |  |
Sbjct: 565 tagtcattacatctgaaagcagtattacaagaaaataacagcccagccgtgggatacgga 506

                                                                       
Query: 430 caatcttggttatggcactaaatgtacatatgacaagcatatatggaatgaacaatttga 489
           | | |||||| || |||||||| |||||||||||||||||| | ||||| ||||| || |
Sbjct: 505 cgaccttggtgatcgcactaaacgtacatatgacaagcataaacggaataaacaacttaa 446

                                                                       
Query: 490 aaatcagaagtgccgtcataagaaatggactaaatattgtgatgaatctgtacacagatg 549
           | || |||||| | | |||||||||||||||||| | ||| ||||||||||||||||| |
Sbjct: 445 agataagaagtcctgccataagaaatggactaaaaactgtaatgaatctgtacacagacg 386

                                                                       
Query: 550 atatctcaaagcttgcaatgcttgcaaaattaccagttccaaagaaagcaacattgaata 609
           | ||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||
Sbjct: 385 agatctcaaagcttgcaatacttgcaaaattaccagtaccaaagaaggcgacattaaata 326

                                                                       
Query: 610 agatcataaataacagaggggattcgtaaatcagatagttgtaagcatctttcgtcatag 669
           | |||| |||||||| | ||||||| ||||||||||||| | | |  |||||| ||||||
Sbjct: 325 atatcacaaataaca-aagggattcttaaatcagatagtcgcaggtgtctttcttcatag 267

                      
Query: 670 ccataaactga 680
           ||| |||||||
Sbjct: 266 ccaaaaactga 256
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  121 bits (61), Expect = 3e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                            
Query: 212      ttgccgagacgagacttcgatatcttttgtgtatatgtttgtgagtgcaaaaagcagcaa 271
                ||||||||| ||||| || |||||||||||| |||| |||||||| || |||||||||||
Sbjct: 22408938 ttgccgagatgagacctcaatatcttttgtgaatatatttgtgagggcgaaaagcagcaa 22408879

                                                                            
Query: 272      cacgaagactacttgcgcacttacaattccaaaatggctaatgctgttgccaatctccat 331
                ||| || |||||||| ||||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct: 22408878 cacaaaaactacttgggcactcacgattccgaaatggctgatgctattgccaatttccat 22408819

                         
Query: 332      ccagctccc 340
                ||| |||||
Sbjct: 22408818 ccaactccc 22408810



 Score =  113 bits (57), Expect = 8e-22
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                            
Query: 518      actaaatattgtgatgaatctgtacacagatgatatctcaaagcttgcaatgcttgcaaa 577
                |||||||||||| ||||| | |||||||||||| || |||||||||||||| || |||||
Sbjct: 22407565 actaaatattgtaatgaaccggtacacagatgaaatttcaaagcttgcaatactcgcaaa 22407506

                                                     
Query: 578      attaccagttccaaagaaagcaacattgaataagatc 614
                ||| |||||||||||||| |||||||| |||||||||
Sbjct: 22407505 attcccagttccaaagaacgcaacattaaataagatc 22407469



 Score =  111 bits (56), Expect = 3e-21
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                            
Query: 351      accaggaaaaagaaatgaattgtcatcacatctgaaagcagtattacaagaaaataacaa 410
                |||||||||||||||||||| ||||| ||||| || |||||||||||||| |||||||| 
Sbjct: 22408688 accaggaaaaagaaatgaatcgtcattacatcagacagcagtattacaaggaaataacag 22408629

                                                                
Query: 411      ccgatacgtggaatccttacaatcttggttatggcactaaatgtacat 458
                || |  ||||| || | ||||| |||||||||||||||||||||||||
Sbjct: 22408628 cccagccgtggtatacgtacaaccttggttatggcactaaatgtacat 22408581



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                       
Query: 617      aaataacagaggggattcgtaaatcagatagttgtaagcatctttcgtcatagcc 671
                ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 22407374 aaataacagaggg-attcgtagatcagatagttgtaagcatctttcatcatagcc 22407321



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 459      atgacaagcatatatggaatgaacaatttgaaaatcagaagtgc 502
                |||||||||||| ||||||||||||||||||| || ||||||||
Sbjct: 22407724 atgacaagcataaatggaatgaacaatttgaagataagaagtgc 22407681
to top
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_A05
          Length = 113326

 Score =  121 bits (61), Expect = 3e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                         
Query: 212   ttgccgagacgagacttcgatatcttttgtgtatatgtttgtgagtgcaaaaagcagcaa 271
             ||||||||| ||||| || |||||||||||| |||| |||||||| || |||||||||||
Sbjct: 65157 ttgccgagatgagacctcaatatcttttgtgaatatatttgtgagggcgaaaagcagcaa 65098

                                                                         
Query: 272   cacgaagactacttgcgcacttacaattccaaaatggctaatgctgttgccaatctccat 331
             ||| || |||||||| ||||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct: 65097 cacaaaaactacttgggcactcacgattccgaaatggctgatgctattgccaatttccat 65038

                      
Query: 332   ccagctccc 340
             ||| |||||
Sbjct: 65037 ccaactccc 65029



 Score =  113 bits (57), Expect = 8e-22
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                         
Query: 518   actaaatattgtgatgaatctgtacacagatgatatctcaaagcttgcaatgcttgcaaa 577
             |||||||||||| ||||| | |||||||||||| || |||||||||||||| || |||||
Sbjct: 63784 actaaatattgtaatgaaccggtacacagatgaaatttcaaagcttgcaatactcgcaaa 63725

                                                  
Query: 578   attaccagttccaaagaaagcaacattgaataagatc 614
             ||| |||||||||||||| |||||||| |||||||||
Sbjct: 63724 attcccagttccaaagaacgcaacattaaataagatc 63688



 Score =  111 bits (56), Expect = 3e-21
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                         
Query: 351   accaggaaaaagaaatgaattgtcatcacatctgaaagcagtattacaagaaaataacaa 410
             |||||||||||||||||||| ||||| ||||| || |||||||||||||| |||||||| 
Sbjct: 64907 accaggaaaaagaaatgaatcgtcattacatcagacagcagtattacaaggaaataacag 64848

                                                             
Query: 411   ccgatacgtggaatccttacaatcttggttatggcactaaatgtacat 458
             || |  ||||| || | ||||| |||||||||||||||||||||||||
Sbjct: 64847 cccagccgtggtatacgtacaaccttggttatggcactaaatgtacat 64800



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                    
Query: 617   aaataacagaggggattcgtaaatcagatagttgtaagcatctttcgtcatagcc 671
             ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 63593 aaataacagaggg-attcgtagatcagatagttgtaagcatctttcatcatagcc 63540



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 459   atgacaagcatatatggaatgaacaatttgaaaatcagaagtgc 502
             |||||||||||| ||||||||||||||||||| || ||||||||
Sbjct: 63943 atgacaagcataaatggaatgaacaatttgaagataagaagtgc 63900
to top
>ref|NM_111004.1| Arabidopsis thaliana transferase AT3G01380 mRNA, complete cds
          Length = 2766

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 139/170 (81%)
 Strand = Plus / Minus

                                                                        
Query: 438  gttatggcactaaatgtacatatgacaagcatatatggaatgaacaatttgaaaatcaga 497
            ||||| ||||| || | |||||||||||||||  | || ||||| |  ||||| || |||
Sbjct: 2513 gttattgcactgaacgcacatatgacaagcatgaacggtatgaagagcttgaatataaga 2454

                                                                        
Query: 498  agtgccgtcataagaaatggactaaatattgtgatgaatctgtacacagatgatatctca 557
            || || | ||| ||||| || || || |||||||| || | ||| |||||||||||||||
Sbjct: 2453 agagctgccatcagaaacgggctgaagattgtgataaaccggtatacagatgatatctca 2394

                                                              
Query: 558  aagcttgcaatgcttgcaaaattaccagttccaaagaaagcaacattgaa 607
            || ||||| || ||||||||||| || ||||| |||||||||||||||||
Sbjct: 2393 aaacttgctatacttgcaaaattcccggttccgaagaaagcaacattgaa 2344



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                        
Query: 276  aagactacttgcgcacttacaattccaaaatggctaatgctgttgccaatctccatccag 335
            ||||| ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||||
Sbjct: 2675 aagaccacttgagcactcacaatcccaaaatggctaatactattcccaatttccatccag 2616

                                                     
Query: 336  ctccctgtgttttggaccaggaaaaagaaatgaattgtcat 376
            || |||||||| |  |||||||| |||||||| || |||||
Sbjct: 2615 cttcctgtgttcttcaccaggaagaagaaatggatcgtcat 2575
to top
>gb|AC010870.6|ATAC010870 Arabidopsis thaliana chromosome III BAC T13O15 genomic sequence,
             complete sequence
          Length = 86324

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                         
Query: 525   attgtgatgaatctgtacacagatgatatctcaaagcttgcaatgcttgcaaaattacca 584
             |||||||| || | ||| ||||||||||||||||| ||||| || ||||||||||| || 
Sbjct: 47738 attgtgataaaccggtatacagatgatatctcaaaacttgctatacttgcaaaattcccg 47797

                                    
Query: 585   gttccaaagaaagcaacattgaa 607
             ||||| |||||||||||||||||
Sbjct: 47798 gttccgaagaaagcaacattgaa 47820



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 276   aagactacttgcgcacttacaattccaaaatggctaatgctgttgccaatctccatccag 335
             ||||| ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||||
Sbjct: 47221 aagaccacttgagcactcacaatcccaaaatggctaatactattcccaatttccatccag 47280

                        
Query: 336   ctccctgtgtt 346
             || ||||||||
Sbjct: 47281 cttcctgtgtt 47291
to top
>emb|AL731866.8| Mouse DNA sequence from clone RP23-37F22 on chromosome 11 Contains the
             5' end of a variant of the Ccl1 gene for chemokine (C-C
             motif) ligand 1, complete sequence
          Length = 105085

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 582   ccagttccaaagaaagcaacat 603
             ||||||||||||||||||||||
Sbjct: 55491 ccagttccaaagaaagcaacat 55512
to top
>gb|AC112222.2| Homo sapiens chromosome 3 clone RP11-114A11, complete sequence
          Length = 151031

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 439    ttatggcactaaatgtacatat 460
              ||||||||||||||||||||||
Sbjct: 106994 ttatggcactaaatgtacatat 107015
to top
>gb|AC112515.4| Homo sapiens chromosome 3 clone RP11-697B5, complete sequence
          Length = 179154

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 439   ttatggcactaaatgtacatat 460
             ||||||||||||||||||||||
Sbjct: 40344 ttatggcactaaatgtacatat 40365
to top
>emb|AL713840.1|CNS07YOU Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
             clone 425A1 of library Caltech CITB-BAC from chromosome 11
             of Mus musculus (mouse)
          Length = 128620

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 582   ccagttccaaagaaagcaacat 603
             ||||||||||||||||||||||
Sbjct: 81934 ccagttccaaagaaagcaacat 81913
to top
>gb|AC166709.9| Mus musculus chromosome 1, clone RP23-406B10, complete sequence
          Length = 175924

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 236   ttttgtgtatatgtttgtgagtgca 260
             ||||||||||||||||||| |||||
Sbjct: 28826 ttttgtgtatatgtttgtgtgtgca 28802
to top
>gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, complete sequence
          Length = 208546

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 236    ttttgtgtatatgtttgtgagtgca 260
              ||||||||||||||||||| |||||
Sbjct: 166923 ttttgtgtatatgtttgtgtgtgca 166899
to top
>gb|AC154655.2| Mus musculus BAC clone RP24-263O11 from chromosome 14, complete sequence
          Length = 196744

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 350    gaccaggaaaaagaaatgaat 370
              |||||||||||||||||||||
Sbjct: 177371 gaccaggaaaaagaaatgaat 177391
to top
>gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome 14, complete sequence
          Length = 179650

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 350    gaccaggaaaaagaaatgaat 370
              |||||||||||||||||||||
Sbjct: 177117 gaccaggaaaaagaaatgaat 177097
to top
>gb|AF282397.1|AF282397 Cucumis sativus clone K34 mitochondrial genomic sequence
          Length = 4467

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 55   aatacaatgaacatccataaa 75
            |||||||||||||||||||||
Sbjct: 2780 aatacaatgaacatccataaa 2800
to top
>dbj|AK036119.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:9630037D07
           product:unclassifiable, full insert sequence
          Length = 2650

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 350 gaccaggaaaaagaaatgaat 370
           |||||||||||||||||||||
Sbjct: 834 gaccaggaaaaagaaatgaat 814
to top
>gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome 14, complete sequence
          Length = 198038

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 237    tttgtgtatatgtttgtgagt 257
              |||||||||||||||||||||
Sbjct: 140623 tttgtgtatatgtttgtgagt 140643
to top
>gb|AC167439.2| Mus musculus BAC clone RP23-461M17 from chromosome 3, complete sequence
          Length = 175414

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tcttttgtgtatatgtttgt 253
             ||||||||||||||||||||
Sbjct: 70228 tcttttgtgtatatgtttgt 70247
to top
>gb|AY133923.1| Uncultured Methanomicrobiaceae archaeon clone LDS5 small subunit
           ribosomal RNA gene, partial sequence
          Length = 736

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 tgtttgtgagtgcaaaaagc 266
           ||||||||||||||||||||
Sbjct: 285 tgtttgtgagtgcaaaaagc 304
to top
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    tattacaagaaaataacaac 411
              ||||||||||||||||||||
Sbjct: 987121 tattacaagaaaataacaac 987102
to top
>gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, complete sequence
          Length = 238980

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 237    tttgtgtatatgtttgtgagtgca 260
              ||||||||||||| ||||||||||
Sbjct: 155598 tttgtgtatatgtctgtgagtgca 155575
to top
>gb|AC113283.13| Mus musculus chromosome 3, clone RP23-397I12, complete sequence
          Length = 189865

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   tcttttgtgtatatgtttgt 253
             ||||||||||||||||||||
Sbjct: 56405 tcttttgtgtatatgtttgt 56386
to top
>gb|AC137156.3| Mus musculus BAC clone RP23-118K10 from chromosome 15, complete sequence
          Length = 205599

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    atatcttttgtgtatatgtttgtg 254
              ||||||| ||||||||||||||||
Sbjct: 196413 atatcttatgtgtatatgtttgtg 196436
to top
>gb|AC089994.2| Felis catus clone RP86-181L4, complete sequence
          Length = 142512

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     aacatccataaactacaaga 83
              ||||||||||||||||||||
Sbjct: 142306 aacatccataaactacaaga 142287
to top
>gb|AC145590.3| Mus musculus BAC clone RP24-175D4 from chromosome 19, complete sequence
          Length = 179063

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    caagcatatatggaatgaac 482
              ||||||||||||||||||||
Sbjct: 133318 caagcatatatggaatgaac 133299
to top
>emb|AL627089.13| Mouse DNA sequence from clone RP23-107H23 on chromosome 4, complete
              sequence
          Length = 182375

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    tccatccagctccctgtgtt 346
              ||||||||||||||||||||
Sbjct: 117570 tccatccagctccctgtgtt 117589
to top
>gb|AC145868.2| Pan troglodytes BAC clone RP43-39F11 from 7, complete sequence
          Length = 209787

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   tatcttttgtgtatatgttt 251
             ||||||||||||||||||||
Sbjct: 89527 tatcttttgtgtatatgttt 89546
to top
>gb|AC125095.3| Mus musculus BAC clone RP24-179H12 from chromosome 14, complete
             sequence
          Length = 147123

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   atatcttttgtgtatatgtt 250
             ||||||||||||||||||||
Sbjct: 16320 atatcttttgtgtatatgtt 16301
to top
>gb|AC123061.4| Mus musculus BAC clone RP23-216H22 from 14, complete sequence
          Length = 193093

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  atatcttttgtgtatatgtt 250
            ||||||||||||||||||||
Sbjct: 2697 atatcttttgtgtatatgtt 2716
to top
>gb|AC123870.3| Mus musculus BAC clone RP23-246A19 from 15, complete sequence
          Length = 223132

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 231    atatcttttgtgtatatgtttgtg 254
              ||||||| ||||||||||||||||
Sbjct: 180043 atatcttatgtgtatatgtttgtg 180020
to top
>ref|XM_724843.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02079)
           partial mRNA
          Length = 1326

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 256 gtgcaaaaagcagcaacacgaaga 279
           ||||||||||||||||||| ||||
Sbjct: 199 gtgcaaaaagcagcaacactaaga 222
to top
>ref|XM_735209.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000873.03.0)
           partial mRNA
          Length = 1026

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 256 gtgcaaaaagcagcaacacgaaga 279
           ||||||||||||||||||| ||||
Sbjct: 199 gtgcaaaaagcagcaacactaaga 222
to top
>gb|AC074000.8| Homo sapiens BAC clone CTD-2023N18 from 7, complete sequence
          Length = 136723

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   tatcttttgtgtatatgttt 251
             ||||||||||||||||||||
Sbjct: 35235 tatcttttgtgtatatgttt 35216
to top
>gb|AC133904.9| Mus musculus chromosome 19, clone RP24-143J12, complete sequence
          Length = 163882

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   caagcatatatggaatgaac 482
             ||||||||||||||||||||
Sbjct: 95875 caagcatatatggaatgaac 95894
to top
>gb|AC158778.4| Mus musculus chromosome 19, clone RP24-90P13, complete sequence
          Length = 167819

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 463  caagcatatatggaatgaac 482
            ||||||||||||||||||||
Sbjct: 8319 caagcatatatggaatgaac 8300
to top
>emb|Z98172.1|HS234H5 Human DNA sequence from clone RP1-234H5 on chromosome 6q21 Contains the
             3' end of the gene for \, complete sequence
          Length = 102230

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   aaaacaaaggccagaagtta 131
             ||||||||||||||||||||
Sbjct: 31529 aaaacaaaggccagaagtta 31548
to top
>emb|Z97632.3|HS196E23 Human DNA sequence from clone RP1-196E23 on chromosome Xq26.1-27.2
             Contains the VGLL1 gene for vestgial like 1 (Drosophila),
             the HTATSF1 gene for HIV TAT specific factor 1, the BRS3
             gene for bombesin-like receptor 3 and a CpG island,
             complete sequence
          Length = 123004

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 517   gactaaatattgtgatgaatctgt 540
             |||||||||||||||| |||||||
Sbjct: 68634 gactaaatattgtgatcaatctgt 68657
to top
>emb|AL137839.6| Human DNA sequence from clone RP3-471C18 on chromosome 6 Contains the
             3' end of two novel genes, complete sequence
          Length = 108793

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   ttacaagaaaataacaaccg 413
             ||||||||||||||||||||
Sbjct: 92705 ttacaagaaaataacaaccg 92686
to top
>emb|AL022726.1|HS625H18 Human DNA sequence from clone RP4-625H18 on chromosome 6p22.2-23 Contains
              the ID4 gene for dominant negative helix-loop-helix
              inhibitor of DNA binding 4 protein, a novel gene, the 5'
              end of two novel genes and four CpG islands, complete
              sequence
          Length = 185371

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    ttacaagaaaataacaaccg 413
              ||||||||||||||||||||
Sbjct: 171011 ttacaagaaaataacaaccg 171030
to top
>gb|AC116715.22| Mus musculus chromosome 5, clone RP23-129N14, complete sequence
          Length = 193245

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   tgtgtatatgtttgtgagtg 258
             ||||||||||||||||||||
Sbjct: 18493 tgtgtatatgtttgtgagtg 18512
to top
>gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, complete sequence
          Length = 247161

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    tgtgtatatgtttgtgagtg 258
              ||||||||||||||||||||
Sbjct: 107822 tgtgtatatgtttgtgagtg 107841
to top
>gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, complete sequence
          Length = 214196

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    tgtgtatatgtttgtgagtg 258
              ||||||||||||||||||||
Sbjct: 166306 tgtgtatatgtttgtgagtg 166325
to top
>gb|AC103819.3| Homo sapiens chromosome 8, clone CTD-3056O22, complete sequence
          Length = 148021

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   atctgaaagcagtattacaa 399
             ||||||||||||||||||||
Sbjct: 62987 atctgaaagcagtattacaa 63006
to top
>emb|BX548033.9| Zebrafish DNA sequence from clone CH211-232E6 in linkage group 8,
             complete sequence
          Length = 170974

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ccaaaatggctaatgctgtt 319
             ||||||||||||||||||||
Sbjct: 40358 ccaaaatggctaatgctgtt 40339
to top
>emb|CR847517.1| Human DNA sequence from clone XX-NCIH2171_9D08, complete sequence
          Length = 112973

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  atctgaaagcagtattacaa 399
            ||||||||||||||||||||
Sbjct: 3752 atctgaaagcagtattacaa 3733
to top
>gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence
          Length = 157430

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    aatgaacaatttgaaaatca 495
              ||||||||||||||||||||
Sbjct: 148610 aatgaacaatttgaaaatca 148591
to top
>gb|AC137066.23| Pan troglodytes clone ptb-31f12, complete sequence
          Length = 153498

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   aatgaacaatttgaaaatca 495
             ||||||||||||||||||||
Sbjct: 87389 aatgaacaatttgaaaatca 87408
to top
>gb|AC112213.2| Homo sapiens chromosome 3 clone RP11-223D18, complete sequence
          Length = 144201

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     cttgggccacatataaaaca 117
              ||||||||||||||||||||
Sbjct: 139018 cttgggccacatataaaaca 138999
to top
>gb|AC099783.2| Homo sapiens chromosome 3 clone RP11-115I24, complete sequence
          Length = 159870

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     cttgggccacatataaaaca 117
              ||||||||||||||||||||
Sbjct: 115206 cttgggccacatataaaaca 115225
to top
>gb|AC010545.9| Homo sapiens chromosome 16 clone RP11-449H11, complete sequence
          Length = 170517

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 586  ttccaaagaaagcaacattg 605
            ||||||||||||||||||||
Sbjct: 7103 ttccaaagaaagcaacattg 7084
to top
>gb|AC092799.2| Homo sapiens chromosome 1 clone RP11-5F19, complete sequence
          Length = 162115

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    cttgggccacatataaaaca 117
             ||||||||||||||||||||
Sbjct: 11212 cttgggccacatataaaaca 11193
to top
>gb|AC066613.7|AC066613 Homo sapiens chromosome 15 clone RP11-707P17 map 15q21.2, complete
            sequence
          Length = 169077

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 476  aatgaacaatttgaaaatca 495
            ||||||||||||||||||||
Sbjct: 1383 aatgaacaatttgaaaatca 1402
to top
>gb|AC000082.4| Homo sapiens Chromosome 22q11.2 Cosmid Clone 59f In DGCR Region,
             complete sequence
          Length = 42019

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   aatgaacaatttgaaaatca 495
             ||||||||||||||||||||
Sbjct: 33090 aatgaacaatttgaaaatca 33071
to top
>gb|AC000070.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 105a In DGCR Region,
            complete sequence
          Length = 38699

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 476  aatgaacaatttgaaaatca 495
            ||||||||||||||||||||
Sbjct: 5465 aatgaacaatttgaaaatca 5446
to top
>gb|AC084732.1|AC084732 Homo sapiens BAC clone RP11-368G2 from 4, complete sequence
          Length = 181576

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    cttgggccacatataaaaca 117
             ||||||||||||||||||||
Sbjct: 28651 cttgggccacatataaaaca 28632
to top
>gb|AC097484.3| Homo sapiens BAC clone RP11-147K6 from 4, complete sequence
          Length = 170217

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    cttgggccacatataaaaca 117
             ||||||||||||||||||||
Sbjct: 57717 cttgggccacatataaaaca 57736
to top
>gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, complete sequence
          Length = 223346

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    tgtgtatatgtttgtgagtg 258
              ||||||||||||||||||||
Sbjct: 101280 tgtgtatatgtttgtgagtg 101299
to top
>gb|AC154462.2| Mus musculus BAC clone RP24-165F12 from chromosome 14, complete
             sequence
          Length = 164631

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   ttggaccaggaaaaagaaat 366
             ||||||||||||||||||||
Sbjct: 53323 ttggaccaggaaaaagaaat 53304
to top
>gb|AC020891.8|AC020891 Homo sapiens chromosome 15 clone RP11-108K3 map 15q21, complete sequence
          Length = 144714

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    aatgaacaatttgaaaatca 495
              ||||||||||||||||||||
Sbjct: 100137 aatgaacaatttgaaaatca 100156
to top
>gb|AC093308.4| Homo sapiens chromosome 5 clone RP11-96B3, complete sequence
          Length = 151635

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    tgtgtatatgtttgtgagtg 258
              ||||||||||||||||||||
Sbjct: 109012 tgtgtatatgtttgtgagtg 109031
to top
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 221267

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   tgtgtatatgtttgtgagtg 258
             ||||||||||||||||||||
Sbjct: 91691 tgtgtatatgtttgtgagtg 91672
to top
>gb|AC153102.3| Sus scrofa clone RP44-33N10, complete sequence
          Length = 113400

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   tattacaagaaaataacaac 411
             ||||||||||||||||||||
Sbjct: 12085 tattacaagaaaataacaac 12066
to top
>emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chromosome 12, complete
             sequence
          Length = 266295

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   aatgtacatatgacaagcat 469
             ||||||||||||||||||||
Sbjct: 18533 aatgtacatatgacaagcat 18514
to top
>emb|AL929510.17| Mouse DNA sequence from clone RP23-241O13 on chromosome 2, complete
             sequence
          Length = 160386

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   tgtgtatatgtttgtgagtg 258
             ||||||||||||||||||||
Sbjct: 88401 tgtgtatatgtttgtgagtg 88420
to top
>emb|BX908747.25| Zebrafish DNA sequence from clone DKEY-58J15 in linkage group 1,
             complete sequence
          Length = 232503

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ttgggccacatataaaacaa 118
             ||||||||||||||||||||
Sbjct: 11394 ttgggccacatataaaacaa 11413
to top
>emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on chromosome 2, complete
             sequence
          Length = 155501

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   tgtgtatatgtttgtgagtg 258
             ||||||||||||||||||||
Sbjct: 65863 tgtgtatatgtttgtgagtg 65844
to top
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 600     acattgaataagatcataaa 619
               ||||||||||||||||||||
Sbjct: 1165317 acattgaataagatcataaa 1165298
to top
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    ctgttgccaatctccatcca 334
              ||||||||||||||||||||
Sbjct: 225040 ctgttgccaatctccatcca 225059
to top
>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    acaatttgaaaatcagaagt 500
              ||||||||||||||||||||
Sbjct: 564972 acaatttgaaaatcagaagt 564953
to top
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 479     gaacaatttgaaaatcagaa 498
               ||||||||||||||||||||
Sbjct: 4031997 gaacaatttgaaaatcagaa 4032016
to top
>emb|AL672266.9| Mouse DNA sequence from clone RP23-342A10 on chromosome X, complete
              sequence
          Length = 216754

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gatatcttttgtgtatatgt 249
              ||||||||||||||||||||
Sbjct: 125754 gatatcttttgtgtatatgt 125773
to top
>gb|M95694.1|MUSR55SQ Mouse microsatellite
          Length = 228

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 239 tgtgtatatgtttgtgagtg 258
           ||||||||||||||||||||
Sbjct: 201 tgtgtatatgtttgtgagtg 220



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 239 tgtgtatatgtttgtgagtg 258
           ||||||||||||||||||||
Sbjct: 107 tgtgtatatgtttgtgagtg 126
to top
>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 479     gaacaatttgaaaatcagaa 498
               ||||||||||||||||||||
Sbjct: 4740508 gaacaatttgaaaatcagaa 4740527
to top
>gb|AF315312.2| Homo sapiens chromosome 8 clone RP1-80K22 map 8q24.3, complete sequence
          Length = 149172

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   atctgaaagcagtattacaa 399
             ||||||||||||||||||||
Sbjct: 91957 atctgaaagcagtattacaa 91938


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,454,079
Number of Sequences: 3902068
Number of extensions: 7454079
Number of successful extensions: 173143
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 172787
Number of HSP's gapped (non-prelim): 352
length of query: 686
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 663
effective length of database: 17,143,297,704
effective search space: 11366006377752
effective search space used: 11366006377752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top