ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1o13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472043.1| Oryza sativa (japonica cultivar-group), predic... 66 2e-07
2ref|XM_472031.1| Oryza sativa (japonica cultivar-group), predic... 54 6e-04
3ref|XM_472038.1| Oryza sativa (japonica cultivar-group), predic... 48 0.035
4dbj|AK065894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
5ref|XM_483753.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.14
6dbj|AK069659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
7gb|BC085344.1| Rattus norvegicus transmembrane protein 97, mRNA ... 42 2.2
8ref|NM_001008334.1| Rattus norvegicus transmembrane protein 97 (... 42 2.2
9gb|AC162871.2| Mus musculus chromosome 1, clone RP24-330F8, comp... 42 2.2
10gb|BC023001.1| Mus musculus regulator of G-protein signaling 2, ... 42 2.2
11gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosom... 42 2.2
12dbj|AK162276.1| Mus musculus 15 days embryo male testis cDNA, RI... 42 2.2
13gb|AF432916.1|AF432916 Mus musculus implantation-related RGS2-li... 42 2.2
14gb|U67187.1|MMU67187 Mus musculus G protein signaling regulator ... 42 2.2
15ref|NM_009061.2| Mus musculus regulator of G-protein signaling 2... 42 2.2
16dbj|AK077922.1| Mus musculus 13 days embryo male testis cDNA, RI... 42 2.2
17gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosom... 42 2.2
18dbj|AK029310.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 42 2.2
19dbj|AK031603.1| Mus musculus 13 days embryo male testis cDNA, RI... 42 2.2
20gb|AC061705.16| Homo sapiens 3 BAC RP11-488M12 (Roswell Park Can... 42 2.2
21gb|AF215668.1|AF215668 Mus musculus regulator of G-protein signa... 42 2.2
22emb|AJ459250.1|TAE459250 Triticum aestivum TAA1a gene for fatty ... 42 2.2
23emb|AJ459249.1|TAE459249 Triticum aestivum mRNA for fatty acyl c... 42 2.2
24gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 ... 42 2.2
25gb|AC114966.2| Homo sapiens chromosome 5 clone RP11-291O24, comp... 42 2.2
26gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosom... 42 2.2
27emb|BX000489.8| Zebrafish DNA sequence from clone CH211-215E19, ... 42 2.2
28emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on ch... 42 2.2
29ref|NM_129018.2| Arabidopsis thaliana unknown protein AT2G34640 ... 40 8.6
30ref|NM_001034403.1| Bos taurus hypothetical LOC511378 (MGC128928... 40 8.6
31gb|U41027.1| Caenorhabditis elegans cosmid R08E3, complete sequence 40 8.6
32gb|AC130697.10| Mus musculus chromosome 15, clone RP24-121O7, co... 40 8.6
33gb|AC117570.11| Mus musculus chromosome 9, clone RP23-18M12, com... 40 8.6
34ref|NM_133706.1| Mus musculus transmembrane protein 97 (Tmem97),... 40 8.6
35gb|AY810222.1| Schistosoma japonicum SJCHGC02863 protein mRNA, p... 40 8.6
36gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome... 40 8.6
37ref|XM_988554.1| PREDICTED: Mus musculus hypothetical LOC545152 ... 40 8.6
38ref|XM_912525.2| PREDICTED: Mus musculus hypothetical LOC545152 ... 40 8.6
39ref|XM_619384.3| PREDICTED: Mus musculus hypothetical LOC545152 ... 40 8.6
40emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chro... 40 8.6
41gb|AC079598.13| Homo sapiens 12 BAC RP11-248E9 (Roswell Park Can... 40 8.6
42emb|AL021446.1|CEF14F4 Caenorhabditis elegans Cosmid F14F4, comp... 40 8.6
43gb|AC122420.4| Mus musculus BAC clone RP24-167C5 from chromosome... 40 8.6
44emb|AL355350.8| Human DNA sequence from clone RP11-483B5 on chro... 40 8.6
45emb|CR759968.6| Zebrafish DNA sequence from clone CH211-198N5 in... 40 8.6
46emb|AJ557546.1|MLI557546 Melittangium lichenicola melithiazol ge... 40 8.6
47gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 ma... 40 8.6
48dbj|AK141287.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 8.6
49dbj|AK155107.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.6
50gb|BC093511.1| Mus musculus transmembrane protein 97, mRNA (cDNA... 40 8.6
51gb|BC018156.1| Mus musculus transmembrane protein 97, mRNA (cDNA... 40 8.6
52emb|AL954819.21| Zebrafish DNA sequence from clone CH211-1F7 in ... 40 8.6
53dbj|AK171954.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 8.6
54gb|BC104594.1| Bos taurus hypothetical LOC511378, mRNA (cDNA clo... 40 8.6
55ref|NM_078078.1| Caenorhabditis elegans Multidrug Resistance Pro... 40 8.6
56ref|NM_078077.2| Caenorhabditis elegans Multidrug Resistance Pro... 40 8.6
57dbj|AK007497.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 40 8.6
58gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complet... 40 8.6
59dbj|BS000047.1| Pan troglodytes chromosome 22 clone:PTB-109H19, ... 40 8.6
60emb|AL929026.10| Mouse DNA sequence from clone RP23-332K7 on chr... 40 8.6
61dbj|AK117813.2| Arabidopsis thaliana At2g34640 mRNA for unknown ... 40 8.6
62dbj|AP001675.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.6
63gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, co... 40 8.6
64emb|AL121677.3|HS6C10 Homo sapiens chromosome 21 Cosmid ICRFc103... 40 8.6
65gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, co... 40 8.6
66dbj|AP000431.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 8.6 
>ref|XM_472043.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 360

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                    
Query: 278 aagtttgtgtcatcaaagcatcctttgaagaaggcatatgg 318
           ||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 176 aagttggtgtcatcaaagcatcctttgaagaagacatatgg 136
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>ref|XM_472031.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1494

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 284  gtgtcatcaaagcatcctttgaagaaggcatatggtgcataca 326
            ||||||||||| ||||||||||||||  ||||||| |||||||
Sbjct: 1325 gtgtcatcaaaccatcctttgaagaatacatatggggcataca 1283
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>ref|XM_472038.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1500

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 284  gtgtcatcaaagcatcctttgaagaaggcata 315
            ||||||||||| ||||||||||||||| ||||
Sbjct: 1331 gtgtcatcaaaccatcctttgaagaagacata 1300
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>dbj|AK065894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044F22, full
            insert sequence
          Length = 1865

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 284  gtgtcatcaaagcatcctttgaagaaggcata 315
            ||||||||||| ||||||||||||||| ||||
Sbjct: 1395 gtgtcatcaaaccatcctttgaagaagacata 1364
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>ref|XM_483753.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2023

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 278  aagtttgtgtcatcaaagcatcctttgaagaaggc 312
            |||||| |||| || ||||||||||||||||||||
Sbjct: 1612 aagtttatgtcgtcgaagcatcctttgaagaaggc 1578
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>dbj|AK069659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028D15, full
            insert sequence
          Length = 2022

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 278  aagtttgtgtcatcaaagcatcctttgaagaaggc 312
            |||||| |||| || ||||||||||||||||||||
Sbjct: 1611 aagtttatgtcgtcgaagcatcctttgaagaaggc 1577
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>gb|BC085344.1| Rattus norvegicus transmembrane protein 97, mRNA (cDNA clone
           MGC:105541 IMAGE:7303878), complete cds
          Length = 1280

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 298 tcctttgaagaaggcatatggtgca 322
           |||||||||||||||||||| ||||
Sbjct: 289 tcctttgaagaaggcatatgctgca 265
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>ref|NM_001008334.1| Rattus norvegicus transmembrane protein 97 (Tmem97), mRNA
          Length = 1280

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 298 tcctttgaagaaggcatatggtgca 322
           |||||||||||||||||||| ||||
Sbjct: 289 tcctttgaagaaggcatatgctgca 265
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>gb|AC162871.2| Mus musculus chromosome 1, clone RP24-330F8, complete sequence
          Length = 126140

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 70   tttgttggagaacaattcttatcct 94
            |||| ||||||||||||||||||||
Sbjct: 3129 tttgatggagaacaattcttatcct 3153
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>gb|BC023001.1| Mus musculus regulator of G-protein signaling 2, mRNA (cDNA clone
           MGC:36187 IMAGE:5365271), complete cds
          Length = 1354

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  tttgttggagaacaattcttatcct 94
           |||| ||||||||||||||||||||
Sbjct: 551 tttgatggagaacaattcttatcct 575
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>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete sequence
          Length = 215502

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 28     tcacttcacacaaatataatg 48
              |||||||||||||||||||||
Sbjct: 104691 tcacttcacacaaatataatg 104671
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>dbj|AK162276.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:8030467M07 product:regulator of
           G-protein signaling 2, full insert sequence
          Length = 1358

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  tttgttggagaacaattcttatcct 94
           |||| ||||||||||||||||||||
Sbjct: 570 tttgatggagaacaattcttatcct 594
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>gb|AF432916.1|AF432916 Mus musculus implantation-related RGS2-like protein mRNA, complete
           cds
          Length = 1364

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  tttgttggagaacaattcttatcct 94
           |||| ||||||||||||||||||||
Sbjct: 547 tttgatggagaacaattcttatcct 571
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>gb|U67187.1|MMU67187 Mus musculus G protein signaling regulator RGS2 (rgs2) mRNA,
           complete cds
          Length = 1240

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  tttgttggagaacaattcttatcct 94
           |||| ||||||||||||||||||||
Sbjct: 557 tttgatggagaacaattcttatcct 581
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>ref|NM_009061.2| Mus musculus regulator of G-protein signaling 2 (Rgs2), mRNA
          Length = 2353

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  tttgttggagaacaattcttatcct 94
           |||| ||||||||||||||||||||
Sbjct: 570 tttgatggagaacaattcttatcct 594
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>dbj|AK077922.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030444M20 product:regulator of
           G-protein signaling 2, full insert sequence
          Length = 1645

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  tttgttggagaacaattcttatcct 94
           |||| ||||||||||||||||||||
Sbjct: 569 tttgatggagaacaattcttatcct 593
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>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence
          Length = 133079

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 283    tgtgtcatcaaagcatccttt 303
              |||||||||||||||||||||
Sbjct: 117073 tgtgtcatcaaagcatccttt 117053
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>dbj|AK029310.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
           library, clone:4832419P18 product:regulator of G-protein
           signaling 2, full insert sequence
          Length = 3010

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  tttgttggagaacaattcttatcct 94
           |||| ||||||||||||||||||||
Sbjct: 570 tttgatggagaacaattcttatcct 594
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>dbj|AK031603.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030458L23 product:regulator of
           G-protein signaling 2, full insert sequence
          Length = 2353

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  tttgttggagaacaattcttatcct 94
           |||| ||||||||||||||||||||
Sbjct: 570 tttgatggagaacaattcttatcct 594
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>gb|AC061705.16| Homo sapiens 3 BAC RP11-488M12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 50829

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 405   ggctcactgcatgcaacatct 425
             |||||||||||||||||||||
Sbjct: 33290 ggctcactgcatgcaacatct 33310
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>gb|AF215668.1|AF215668 Mus musculus regulator of G-protein signaling 2 mRNA, complete cds
          Length = 737

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  tttgttggagaacaattcttatcct 94
           |||| ||||||||||||||||||||
Sbjct: 553 tttgatggagaacaattcttatcct 577
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>emb|AJ459250.1|TAE459250 Triticum aestivum TAA1a gene for fatty acyl coA reductase
          Length = 2448

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 215  gggtcgaagttgaagaggctaccat 239
            |||||||| ||||||||||||||||
Sbjct: 2375 gggtcgaaattgaagaggctaccat 2351
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>emb|AJ459249.1|TAE459249 Triticum aestivum mRNA for fatty acyl coA reductase (TAA1a gene)
          Length = 1919

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 215  gggtcgaagttgaagaggctaccat 239
            |||||||| ||||||||||||||||
Sbjct: 1520 gggtcgaaattgaagaggctaccat 1496
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>gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 map 4p16, complete sequence
          Length = 185393

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 291   caaagcatcctttgaagaagg 311
             |||||||||||||||||||||
Sbjct: 29007 caaagcatcctttgaagaagg 28987
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>gb|AC114966.2| Homo sapiens chromosome 5 clone RP11-291O24, complete sequence
          Length = 155461

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 247   gtccatctttgcttccttcct 267
             |||||||||||||||||||||
Sbjct: 49488 gtccatctttgcttccttcct 49508
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>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete
             sequence
          Length = 196552

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    tcacttcacacaaatataatg 48
             |||||||||||||||||||||
Sbjct: 12523 tcacttcacacaaatataatg 12543
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>emb|BX000489.8| Zebrafish DNA sequence from clone CH211-215E19, complete sequence
          Length = 201748

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 61     atttacatttttgttggagaacaat 85
              |||||||||| ||||||||||||||
Sbjct: 157253 atttacatttgtgttggagaacaat 157277
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>emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on chromosome 1, complete
              sequence
          Length = 210040

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 70     tttgttggagaacaattcttatcct 94
              |||| ||||||||||||||||||||
Sbjct: 207848 tttgatggagaacaattcttatcct 207872
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>ref|NM_129018.2| Arabidopsis thaliana unknown protein AT2G34640 mRNA, complete cds
          Length = 1889

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 543 agaagtaatcccagcatgca 562
           ||||||||||||||||||||
Sbjct: 272 agaagtaatcccagcatgca 253
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>ref|NM_001034403.1| Bos taurus hypothetical LOC511378 (MGC128928), mRNA
          Length = 1688

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 343 tcctttgaagaaggcatatg 324
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>gb|U41027.1| Caenorhabditis elegans cosmid R08E3, complete sequence
          Length = 30300

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   tatttttgcggccgtacatt 160
             ||||||||||||||||||||
Sbjct: 10642 tatttttgcggccgtacatt 10623
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>gb|AC130697.10| Mus musculus chromosome 15, clone RP24-121O7, complete sequence
          Length = 152112

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 235   accatctttgccgtccatctttgc 258
             |||||||||||| |||||||||||
Sbjct: 83848 accatctttgccatccatctttgc 83825
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>gb|AC117570.11| Mus musculus chromosome 9, clone RP23-18M12, complete sequence
          Length = 238598

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    ggaagattccactcatttct 128
              ||||||||||||||||||||
Sbjct: 144916 ggaagattccactcatttct 144935
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>ref|NM_133706.1| Mus musculus transmembrane protein 97 (Tmem97), mRNA
          Length = 1347

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 355 tcctttgaagaaggcatatg 336
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>gb|AY810222.1| Schistosoma japonicum SJCHGC02863 protein mRNA, partial cds
          Length = 1651

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 aagtttgtgtcatcaaagca 297
           ||||||||||||||||||||
Sbjct: 825 aagtttgtgtcatcaaagca 844
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>gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome 16, complete sequence
          Length = 191050

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   tcctttgaagaaggcatatg 317
             ||||||||||||||||||||
Sbjct: 20955 tcctttgaagaaggcatatg 20936
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>ref|XM_988554.1| PREDICTED: Mus musculus hypothetical LOC545152 (LOC545152), mRNA
          Length = 1327

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 337 tcctttgaagaaggcatatg 318
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>ref|XM_912525.2| PREDICTED: Mus musculus hypothetical LOC545152 (LOC545152), mRNA
          Length = 1327

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 337 tcctttgaagaaggcatatg 318
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>ref|XM_619384.3| PREDICTED: Mus musculus hypothetical LOC545152 (LOC545152), mRNA
          Length = 1327

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 337 tcctttgaagaaggcatatg 318
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>emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chromosome 16, complete
              sequence
          Length = 213704

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    tcctttgaagaaggcatatg 317
              ||||||||||||||||||||
Sbjct: 184404 tcctttgaagaaggcatatg 184385
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>gb|AC079598.13| Homo sapiens 12 BAC RP11-248E9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 168901

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 301    tttgaagaaggcatatggtgcata 324
              ||||||||||||||||| ||||||
Sbjct: 157596 tttgaagaaggcatatgctgcata 157619
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>emb|AL021446.1|CEF14F4 Caenorhabditis elegans Cosmid F14F4, complete sequence
          Length = 21961

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   aattggaagattccactcat 124
             ||||||||||||||||||||
Sbjct: 17897 aattggaagattccactcat 17916
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>gb|AC122420.4| Mus musculus BAC clone RP24-167C5 from chromosome 8, complete sequence
          Length = 179058

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    tcatctcaagaattggaaga 114
             ||||||||||||||||||||
Sbjct: 26247 tcatctcaagaattggaaga 26228
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>emb|AL355350.8| Human DNA sequence from clone RP11-483B5 on chromosome 10 Contains two
              novel genes, the 5'end of the gene for VPS10 domain
              receptor protein SORCS 3 (SORCS3) and a CpG island,
              complete sequence
          Length = 153764

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     gagaacaattcttatccttc 96
              ||||||||||||||||||||
Sbjct: 123544 gagaacaattcttatccttc 123525
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>emb|CR759968.6| Zebrafish DNA sequence from clone CH211-198N5 in linkage group 8,
             complete sequence
          Length = 182233

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    tatgatttacatttttgttg 76
             ||||||||||||||||||||
Sbjct: 64759 tatgatttacatttttgttg 64740
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>emb|AJ557546.1|MLI557546 Melittangium lichenicola melithiazol gene cluster
          Length = 51855

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ggaccgctgggacgtggacg 181
             ||||||||||||||||||||
Sbjct: 31155 ggaccgctgggacgtggacg 31174
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>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete
             sequence
          Length = 93060

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 543   agaagtaatcccagcatgca 562
             ||||||||||||||||||||
Sbjct: 19624 agaagtaatcccagcatgca 19605
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>dbj|AK141287.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:C430021H06 product:hypothetical
           protein, full insert sequence
          Length = 3962

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 235 accatctttgccgtccatctttgc 258
           |||||||||||| |||||||||||
Sbjct: 60  accatctttgccatccatctttgc 83
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>dbj|AK155107.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630201P20
           product:similar to MAC30 protein (Fragment) [Homo
           sapiens], full insert sequence
          Length = 1344

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 367 tcctttgaagaaggcatatg 348
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>gb|BC093511.1| Mus musculus transmembrane protein 97, mRNA (cDNA clone MGC:102369
           IMAGE:5124076), complete cds
          Length = 1318

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 332 tcctttgaagaaggcatatg 313
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>gb|BC018156.1| Mus musculus transmembrane protein 97, mRNA (cDNA clone MGC:25841
           IMAGE:4192256), complete cds
          Length = 1347

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 355 tcctttgaagaaggcatatg 336
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>emb|AL954819.21| Zebrafish DNA sequence from clone CH211-1F7 in linkage group 8, complete
              sequence
          Length = 177929

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     tatgatttacatttttgttg 76
              ||||||||||||||||||||
Sbjct: 134364 tatgatttacatttttgttg 134345
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>dbj|AK171954.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830021L03 product:similar to MAC30
           protein (Fragment) [Homo sapiens], full insert sequence
          Length = 1311

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 334 tcctttgaagaaggcatatg 315
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>gb|BC104594.1| Bos taurus hypothetical LOC511378, mRNA (cDNA clone MGC:128928
           IMAGE:8120447), complete cds
          Length = 1688

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 343 tcctttgaagaaggcatatg 324
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>ref|NM_078078.1| Caenorhabditis elegans Multidrug Resistance Protein family member
            (mrp-5) (mrp-5) mRNA, complete cds
          Length = 4284

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  aattggaagattccactcat 124
            ||||||||||||||||||||
Sbjct: 3203 aattggaagattccactcat 3184
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>ref|NM_078077.2| Caenorhabditis elegans Multidrug Resistance Protein family member
            (mrp-5) (mrp-5) mRNA, complete cds
          Length = 4632

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  aattggaagattccactcat 124
            ||||||||||||||||||||
Sbjct: 3122 aattggaagattccactcat 3103
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>dbj|AK007497.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810014L12 product:similar to
           MAC30 PROTEIN (FRAGMENT) [Homo sapiens], full insert
           sequence
          Length = 1061

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tcctttgaagaaggcatatg 317
           ||||||||||||||||||||
Sbjct: 84  tcctttgaagaaggcatatg 65
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>gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complete sequence
          Length = 172515

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 236   ccatctttgccgtccatctttgct 259
             |||||||||| |||||||||||||
Sbjct: 21019 ccatctttgcagtccatctttgct 20996
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>dbj|BS000047.1| Pan troglodytes chromosome 22 clone:PTB-109H19, map 22, complete
              sequences
          Length = 214118

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    ccatctttgcttccttcctc 268
              ||||||||||||||||||||
Sbjct: 195085 ccatctttgcttccttcctc 195066
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>emb|AL929026.10| Mouse DNA sequence from clone RP23-332K7 on chromosome 2, complete
             sequence
          Length = 124244

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   catctttgcttccttcctca 269
             ||||||||||||||||||||
Sbjct: 51630 catctttgcttccttcctca 51649
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>dbj|AK117813.2| Arabidopsis thaliana At2g34640 mRNA for unknown protein, complete
           cds, clone: RAFL18-01-E08
          Length = 1889

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 543 agaagtaatcccagcatgca 562
           ||||||||||||||||||||
Sbjct: 272 agaagtaatcccagcatgca 253
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>dbj|AP001675.1| Homo sapiens genomic DNA, chromosome 21q, section 19/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   ccatctttgcttccttcctc 268
             ||||||||||||||||||||
Sbjct: 19718 ccatctttgcttccttcctc 19699
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>gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, complete sequence
          Length = 224141

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    tcatctcaagaattggaaga 114
             ||||||||||||||||||||
Sbjct: 21952 tcatctcaagaattggaaga 21971
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>emb|AL121677.3|HS6C10 Homo sapiens chromosome 21 Cosmid ICRFc103C106, complete sequence
          Length = 41943

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ccatctttgcttccttcctc 268
             ||||||||||||||||||||
Sbjct: 13320 ccatctttgcttccttcctc 13339
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>gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, complete sequence
          Length = 218949

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 235   accatctttgccgtccatctttgc 258
             |||||||||||| |||||||||||
Sbjct: 12182 accatctttgccatccatctttgc 12205
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>dbj|AP000431.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B28M9,
             LL56-APP region, complete sequence
          Length = 152487

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   ccatctttgcttccttcctc 268
             ||||||||||||||||||||
Sbjct: 59085 ccatctttgcttccttcctc 59066


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,060,589
Number of Sequences: 3902068
Number of extensions: 8060589
Number of successful extensions: 115792
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115677
Number of HSP's gapped (non-prelim): 115
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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