ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags1o01 |
|---|---|
| Clone Library Name | barley_pub |
>EXG_ASPOR (Q7Z9L3) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 405 Score = 45.8 bits (107), Expect = 1e-04 Identities = 49/204 (24%), Positives = 79/204 (38%), Gaps = 40/204 (19%) Frame = -3 Query: 610 NEPSEQVHIDT--LKKYYKAGYNAVRNQVKRDDVYVIMEGRLAGGGDSEMADFATQFRNC 437 NEP+ +D L++YY + Y V N+ V +G L F T+ Sbjct: 198 NEPNIPGGVDQGKLQEYYGSVYGIV-NKYNAGTSVVYGDGFLPV---ESWNGFKTEGSKV 253 Query: 436 VLDVHCYNLYGDMFNAGRMSAEQNIRYVTTHQADHLKSLIRANGALVFIGEWT------- 278 V+D H Y+++ + A M + +I V HL+ A+ V +GEWT Sbjct: 254 VMDTHHYHMFDNGLIA--MDIDSHIDAVCQFAHQHLE----ASDKPVIVGEWTGAVTDCA 307 Query: 277 -----------------AEWKVGGAS--------------REENQTFVDAQLDVYGQATF 191 A+ +G S R + + F++AQLD + + Sbjct: 308 KYLNGKGNGARYDGSYAADKAIGDCSSLATGFVSKLSDEERSDMRRFIEAQLDAF-ELKS 366 Query: 190 GWAFWTYSNPKDPYWSLKSLIKDG 119 GW FWT+ P W + L++ G Sbjct: 367 GWVFWTWKTEGAPGWDMSDLLEAG 390
>EXG_SACKL (Q875R9) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 439 Score = 45.4 bits (106), Expect = 1e-04 Identities = 50/218 (22%), Positives = 76/218 (34%), Gaps = 43/218 (19%) Frame = -3 Query: 610 NEPSEQV-HIDTLKKYYKAGYNAVRNQVKRDDVYVIMEGRLAGGGDSEMADFATQFRNCV 434 NEP V +D LK+YY+ GY+ +RN++ D + VI + A V Sbjct: 226 NEPLGPVLDMDKLKEYYQFGYDYLRNELGSDQIVVIHDAFEAYNYWDSTLTVEDGSWGVV 285 Query: 433 LDVHCYNLYGDMFNAGRMSAEQNIRYVTTHQ--ADHLKSLIRANGALVFIGEWTA----- 275 +D H Y + S++Q R + H A + + GEW+A Sbjct: 286 VDHHHYQCF---------SSDQLARSIDEHVSVACEWGTGVLTESHWTVAGEWSAALTDC 336 Query: 274 -----------------------EWKVGGASREE------------NQTFVDAQLDVYGQ 200 + +G E N+ +V+AQLD + + Sbjct: 337 AKWINGVGYGARYDGSFTKDSESSYYIGSCENNEDVSTWSEERKSNNRKYVEAQLDAF-E 395 Query: 199 ATFGWAFWTYSNPKDPYWSLKSLIKDGNITVPQN*RPY 86 GW FW Y W L+ L+ G P R Y Sbjct: 396 LRGGWIFWCYKTETTVEWDLQRLMYSGLFPQPVTDRQY 433
>EXG_YARLI (Q12725) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 421 Score = 43.5 bits (101), Expect = 5e-04 Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 32/201 (15%) Frame = -3 Query: 610 NEP-SEQVHIDTLKKYYKAGYNAVRNQVKRDDVYVIMEGRLAGGGDSEMADFATQFRNCV 434 NEP + ++ ++KY++ G+ VR+ D VI + + F N V Sbjct: 212 NEPLGPAIGMEVIEKYFQEGFWTVRH-AGSDTAVVIHDAFQEKNYFNNFMTTEQGFWNVV 270 Query: 433 LDVHCYNLYG-------------DMFNAGRM-SAEQNIRYV---------TTHQADHLKS 323 LD H Y ++ ++ N GR S E + R TH + + Sbjct: 271 LDHHQYQVFSPGELARNIDQHIAEVCNVGRQASTEYHWRIFGEWSAALTDCTHWLNGVGK 330 Query: 322 LIRANGALVFIGEWTAEWKVGGAS--------REENQTFVDAQLDVYGQATFGWAFWTYS 167 R +G+ F G + G ++E++ +V+AQLD + GW +WTY Sbjct: 331 GPRLDGS--FPGSYYQRSCQGRGDIQTWSEQDKQESRRYVEAQLDAWEHGGDGWIYWTYK 388 Query: 166 NPKDPYWSLKSLIKDGNITVP 104 W + L+ +G P Sbjct: 389 TENALEWDFRRLVDNGIFPFP 409
>EXG_CANOL (Q8NKF9) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 425 Score = 43.1 bits (100), Expect = 6e-04 Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 35/210 (16%) Frame = -3 Query: 610 NEPSEQV-HIDTLKKYYKAGYNAVRNQVKRDDVYVIMEGRLAGGGDSEMADF---ATQFR 443 NEP V +D L+++Y+ GY+ +RN + I+ D +F + + Sbjct: 213 NEPLGPVLDMDGLRQFYQDGYSEIRNNDGVESYNAIIIHDAFQQTDHYWDNFMQVSGGYW 272 Query: 442 NCVLDVHCYNLYGDMFNAGRMSAEQNIR----YVTTHQAD-HLKSLIRANGALVFIGEWT 278 N V+D H Y ++ A + E +I+ + TTH+ + H + + AL +W Sbjct: 273 NVVVDHHHYQVFDQA--ALELLIEDHIKTACNWGTTHKDEAHWNIVGEWSSALTDCAKWL 330 Query: 277 ------AEWK-----------------VGGASREEN---QTFVDAQLDVYGQATFGWAFW 176 A W + G + E + + +AQLD + Q GW FW Sbjct: 331 NGVGHGARWSGNYDNCPYIDSCLSYTDLSGWTDEYKTNVRKYTEAQLDAWEQVG-GWFFW 389 Query: 175 TYSNPKDPYWSLKSLIKDGNITVPQN*RPY 86 + P W ++L G I P N R Y Sbjct: 390 CWKTESAPEWDFQALTNAGLIPQPLNDRQY 419
>EXG_BLUGR (Q96V64) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 426 Score = 43.1 bits (100), Expect = 6e-04 Identities = 52/210 (24%), Positives = 77/210 (36%), Gaps = 41/210 (19%) Frame = -3 Query: 610 NEPSEQVH-IDTLKKYYKAGYNAVRNQVKRDDVYVIMEGRLAGGGDSEMADFATQFRNCV 434 NEP+ + + +KK+Y G+ VR Q + I + L + + N + Sbjct: 207 NEPANWGNDLSQIKKFYYDGWGNVRTQGQT--AVTIHDAFLDPRSWNGFMNSEAGVNNVI 264 Query: 433 LDVHCYNLYGDMFNAGRMSAEQNIRYVTTHQADHLKSLIRANGALVFIGEWT------AE 272 LD H Y ++ A + A +V T + K I+ +GEWT A+ Sbjct: 265 LDTHIYQVFSQNEVAMKPCA-----HVQTACSSIDK--IKPTDKWTIVGEWTGAQTDCAK 317 Query: 271 WKVG---GA-------------------------------SREENQTFVDAQLDVYGQAT 194 W G GA + Q FV+AQLD Y T Sbjct: 318 WLNGLGKGARYDGTLPGHSEGYYGSCDKKYEGTVDSMLPVDKTNLQYFVEAQLDAYESHT 377 Query: 193 FGWAFWTYSNPKDPYWSLKSLIKDGNITVP 104 GW FWT+ P W ++L + G I P Sbjct: 378 -GWFFWTWKTESAPEWHFQNLTRAGLIPQP 406
>EXG_CANAL (P29717) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 438 Score = 42.0 bits (97), Expect = 0.001 Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 38/213 (17%) Frame = -3 Query: 610 NEPSEQV-HIDTLKKYYKAGYNAVRNQVKRDDVYVIMEGRLAGGGDSEMADFATQFRNCV 434 NEP V ++D LK+++ GYN++R V + ++ G ++ + Q+ N V Sbjct: 229 NEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQW-NVV 287 Query: 433 LDVHCYNLYGDMFNAGRMSAEQNIRY-VTTHQADHLKSLIRANGALVFIGEWTA------ 275 +D H Y + F+ G +S N V + K N A GEW+A Sbjct: 288 VDHHHYQV----FSGGELSRNINDHISVACNWGWDAKKESHWNVA----GEWSAALTDCA 339 Query: 274 EWKVG---GASRE---------------------------ENQTFVDAQLDVYGQATFGW 185 +W G GA E + + +++AQLD + + T GW Sbjct: 340 KWLNGVNRGARYEGAYDNAPYIGSCQPMLDISQWSDEHKTDTRRYIEAQLDAF-EYTGGW 398 Query: 184 AFWTYSNPKDPYWSLKSLIKDGNITVPQN*RPY 86 FW++ P WS ++L +G P R + Sbjct: 399 VFWSWKTENAPEWSFQTLTYNGLFPQPVTDRQF 431
>EXG3_SCHPO (O74799) Glucan 1,3-beta-glucosidase 3 (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 464 Score = 34.7 bits (78), Expect(2) = 0.004 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%) Frame = -3 Query: 298 VFIGEWTA-----EWKVGGASREENQTFVDAQLDVYGQATFGWAFWTYS--NPKDPYWSL 140 + IGEW+ W + + F +AQL+ Y G FWTY + K W Sbjct: 284 IVIGEWSCTLSQESWSQTKLHDKRRRDFGEAQLNQYLNYCGGCFFWTYKFLHGKGGDWDF 343 Query: 139 KSLIKDGNITVP 104 +S+++D I P Sbjct: 344 RSVVEDKVINYP 355 Score = 25.0 bits (53), Expect(2) = 0.004 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -2 Query: 467 GRLCHAVPELRTRR 426 G LCHA P+L TRR Sbjct: 256 GELCHAPPKLITRR 269
>EXG_KLULA (Q12628) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 429 Score = 40.4 bits (93), Expect = 0.004 Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 42/217 (19%) Frame = -3 Query: 610 NEP-SEQVHIDTLKKYYKAGYNAVRNQVKRDDVYVIMEG-RLAGGGDSEMADFATQFRNC 437 NEP + +D LK+ Y Y+ +RN ++RD + VI + + A D ++ F Sbjct: 214 NEPLGPVIDMDKLKELYNWAYDYLRNDLQRDQILVIHDAFQKANYFDDQLTVEQGAF-GV 272 Query: 436 VLDVHCYNLYGDMFNAGRMSAEQNIRYVTTHQADHLKSLIRANGALVFIGEWTA------ 275 ++D H Y ++ GR + +++I V + +L A+ +V GEW+A Sbjct: 273 LVDHHHYQVFSPE-EVGR-TIDEHISVVCEQGKE---TLTEAHWNVV--GEWSAALTDCT 325 Query: 274 EWKVG---GA-------------------------------SREENQTFVDAQLDVYGQA 197 +W G GA ++ + +++AQLD Y + Sbjct: 326 KWLNGVGIGARYDGSFVKNQDTSYWIGSCEGSQDISTWTSDKKDNYRKYIEAQLDAY-EI 384 Query: 196 TFGWAFWTYSNPKDPYWSLKSLIKDGNITVPQN*RPY 86 GW +W Y W + L++ G P R + Sbjct: 385 RNGWIYWCYKTEDTLEWDYRKLVQSGLFPQPLTNRQF 421
>EXG1_SCHPO (Q9URU6) Glucan 1,3-beta-glucosidase 1 precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 407 Score = 37.0 bits (84), Expect = 0.045 Identities = 54/203 (26%), Positives = 77/203 (37%), Gaps = 28/203 (13%) Frame = -3 Query: 610 NEP-SEQVHIDTLKKYYKAGYNAVRNQVKRDDVYVIMEGRLAGGGDSEMADFAT---QFR 443 NEP + +D LK+Y YN V N + +I + + D + D+ Sbjct: 212 NEPLGYGLDMDQLKQYDLDAYNIV-NPLSSSVATIIHDAYV----DLSIWDYGVVSPSSY 266 Query: 442 NCVLDVHCYNLY-------------GDMFNAGRMSAEQNIRYVTTHQADHLKSLI---RA 311 N V+DVH Y LY D+ + G A VT + L Sbjct: 267 NLVMDVHRYQLYESDECSKTLDDHLSDVCSIGDSIASSPYITVTGEWSGTLADCTIFEEG 326 Query: 310 NGALVFIG-------EWTAEWKVGGASREENQTFVDAQLDVYGQATFGWAFWT-YSNPKD 155 + FIG WT E+K GA R F++ QLD + + GW +WT + Sbjct: 327 VDSSTFIGPNSGDISTWTDEYK--GAVR----LFIETQLDQFERGA-GWIYWTAKTGGPS 379 Query: 154 PYWSLKSLIKDGNITVPQN*RPY 86 P W + LI+ G P R Y Sbjct: 380 PTWDMGLLIEYGVFPQPFTDRQY 402
>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 37.0 bits (84), Expect = 0.045 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -3 Query: 250 REENQTFVDAQLDVYGQATFGWAFWTYSNPKDPYWSLKSLIKDGNITVPQN*RPY 86 ++ + F++AQLD + + T GW W Y W ++ LI+ P N R Y Sbjct: 387 KQNTRKFIEAQLDAF-EMTGGWIMWCYKTENSIEWDVEKLIQLNIFPQPINDRKY 440
>EXG2_YEAST (P52911) Glucan 1,3-beta-glucosidase 2 precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase 2) Length = 562 Score = 36.6 bits (83), Expect = 0.059 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = -3 Query: 292 IGEWTAEWKVGGASREENQTFVDAQLDVYGQATFGWAFWTYSNPKDPYWSLKSLIKDGNI 113 + +WT ++ R+ + F++AQL Y T GW FW + W L K+ N+ Sbjct: 421 LADWTQDY------RDRVRQFIEAQLATYSSKTTGWIFWNWKTEDAVEWDYLKL-KEANL 473
>EXG_DEBOC (Q12700) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 425 Score = 36.2 bits (82), Expect = 0.077 Identities = 52/208 (25%), Positives = 79/208 (37%), Gaps = 39/208 (18%) Frame = -3 Query: 610 NEP-SEQVHIDTLKKYYKAGYNAVRNQVKRDDVYVIMEGRLAGGGDSEMADFATQFRNCV 434 NEP + ++ LK++++ GY +RN V + + G D+ + Q+ N V Sbjct: 218 NEPLGPSLDLNYLKEFFQQGYQNLRNSGSVQAVIIQDAFQPMGYWDNFLT--LDQYWNVV 275 Query: 433 LDVHCYNLYGDMFNAGRM--SAEQNIRYVTTHQADHLKSLIRANGALVFIGEWTA----- 275 +D H Y + F+AG + S + +I D K N A GEW+A Sbjct: 276 VDHHHYQV----FSAGELQRSIDDHITVACNWGWDAKKEY-HWNVA----GEWSAALTDC 326 Query: 274 -EWKVG---GAS---------------------------REENQTFVDAQLDVYGQATFG 188 W G GA R + +++AQLD + Q T G Sbjct: 327 ARWLNGVGRGARFSGDFDNSPYFGSCDCYVNIATWPSEYRTNVRRYIEAQLDAFEQ-TGG 385 Query: 187 WAFWTYSNPKDPYWSLKSLIKDGNITVP 104 W FW + W L+ LI G P Sbjct: 386 WFFWNWKCENAIEWDLQGLITAGVFPYP 413
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 36.2 bits (82), Expect = 0.077 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = -3 Query: 292 IGEWTAEWKVGGASREENQTFVDAQLDVYGQATFGWAFWTYSNPKDPYWSLKSLIK 125 +G W+ E K + + F++AQLD + + T GW W Y W ++ LI+ Sbjct: 379 VGLWSEERK------QNTRKFIEAQLDAF-EMTGGWIMWCYKTENSIEWDVEKLIQ 427
>EXG1_HANAN (O93939) Glucan 1,3-beta-glucosidase 1 precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase 1) Length = 498 Score = 36.2 bits (82), Expect = 0.077 Identities = 16/56 (28%), Positives = 24/56 (42%) Frame = -3 Query: 250 REENQTFVDAQLDVYGQATFGWAFWTYSNPKDPYWSLKSLIKDGNITVPQN*RPYY 83 +E + F++ QL Y + GW FW Y W K L++ P N Y+ Sbjct: 408 KENIRKFIEIQLLTYENSNSGWIFWNYKTENAIEWDFKKLVEHKLFPHPFNEYKYF 463
>EXG_SACBA (Q876J3) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 448 Score = 34.7 bits (78), Expect = 0.23 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -3 Query: 250 REENQTFVDAQLDVYGQATFGWAFWTYSNPKDPYWSLKSLIKDGNITVPQN*RPY 86 +E + +V+AQLD + + GW W Y W ++ L+ +G P R Y Sbjct: 386 KENTRRYVEAQLDAF-EMRGGWIIWCYKTESSLEWDVQRLMYNGLFPQPLTDRQY 439
>EXG1_YEAST (P23776) Glucan 1,3-beta-glucosidase I/II precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase I/II) (Soluble cell wall protein 6) Length = 448 Score = 33.5 bits (75), Expect = 0.50 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = -3 Query: 250 REENQTFVDAQLDVYGQATFGWAFWTYSNPKDPYWSLKSLIKDGNITVPQN*RPY 86 +E + +V+AQLD + + GW W Y W + L+ +G P R Y Sbjct: 386 KENTRRYVEAQLDAF-EMRGGWIIWCYKTESSLEWDAQRLMFNGLFPQPLTDRKY 439
>THIC2_METMA (Q8Q0F4) Thiamine biosynthesis protein thiC 2| Length = 428 Score = 32.7 bits (73), Expect = 0.86 Identities = 16/30 (53%), Positives = 19/30 (63%) Frame = -3 Query: 403 DMFNAGRMSAEQNIRYVTTHQADHLKSLIR 314 DMFNA R AEQ + +VT H +L SL R Sbjct: 139 DMFNAVRKHAEQGVDFVTVHAGVNLNSLER 168
>THIC2_METAC (Q8TPW4) Thiamine biosynthesis protein thiC 2| Length = 428 Score = 32.7 bits (73), Expect = 0.86 Identities = 16/30 (53%), Positives = 19/30 (63%) Frame = -3 Query: 403 DMFNAGRMSAEQNIRYVTTHQADHLKSLIR 314 DMFNA R AEQ + +VT H +L SL R Sbjct: 139 DMFNAVRKHAEQGVDFVTVHAGVNLNSLER 168
>EXG_PICAN (Q12626) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 435 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = -3 Query: 232 FVDAQLD--VYGQATFGWAFWTYSNPKDPYWSLKSLIKDGNITVPQN*RPY 86 +V+AQ+D +YG+ GW FW + W ++ L+ G I P + R Y Sbjct: 379 YVEAQMDSFLYGKNA-GWVFWCWKTENTIEWDMQRLLGLGIIPQPLDDRQY 428
>MBP_RAT (P02688) Myelin basic protein S (MBP S)| Length = 194 Score = 32.0 bits (71), Expect = 1.5 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = -2 Query: 479 RFRDGRLCHAVPELRTRRSLLQPLWRHVQRRQDERGAEHTLRD-HTPG*PPQEPDKGKRR 303 R R G LCH + TR + L + QR QDE H ++ TP PP KG+ Sbjct: 74 RSRPG-LCHMYKDSHTRTTHYGSLPQKSQRTQDENPVVHFFKNIVTPRTPPPSQGKGRGL 132 Query: 302 TC--LYWGMDGGVEG 264 + WG +G G Sbjct: 133 SLSRFSWGAEGQKPG 147
>GUN5_THEFU (Q01786) Endoglucanase E-5 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E-4) (Cellulase E-5) (Cellulase E5) Length = 466 Score = 32.0 bits (71), Expect = 1.5 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = -3 Query: 358 YVTTHQADHLKSLIRANGAL-VFIGEWTAEWKVGGASREENQTFVDAQLDVYGQATFGWA 182 Y +H+ ++L +L A+ VF+ E+ E G + + D +D+ + GW Sbjct: 366 YAASHRDNYLNALREASELFPVFVTEFGTETYTGDGANDFQMA--DRYIDLMAERKIGWT 423 Query: 181 FWTYSN 164 W YS+ Sbjct: 424 KWNYSD 429
>EXG2_HANAN (O93983) Glucan 1,3-beta-glucosidase 2 precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase 2) Length = 427 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -3 Query: 232 FVDAQLDVYGQATFGWAFWTYSNPKDPYWSLKSLIKDGNITVPQN*RPY 86 +++AQLD + + + GW FWT+ W + L G P R Y Sbjct: 375 YIEAQLDAFEKRS-GWIFWTWKTETTLEWDFQKLSYYGIFPSPLTSRQY 422
>YBQ6_YEAST (P38081) Hypothetical 57.8 kDa protein in PRP6-MUM2 intergenic| region Length = 501 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Frame = -3 Query: 238 QTFVDAQLDVYGQ-ATFGWAFWT--YSNPKDPYWSLKSLIKDGNI 113 Q +V Q DV+ A++GW FWT + W L +++ GN+ Sbjct: 355 QKYVQTQADVFSHVASWGWFFWTLQFEYGDGGEWGLAPMMQKGNL 399
>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)| Length = 4684 Score = 30.8 bits (68), Expect = 3.3 Identities = 25/82 (30%), Positives = 37/82 (45%) Frame = -2 Query: 611 ERAIGASAHRHSEEILQSRLQRREEPGEARRCVCDHGRPARRWRRFRDGRLCHAVPELRT 432 ER G+ +H H +++LQS Q +E +RC+ + +D RL E RT Sbjct: 1092 EREYGSCSH-HYQQLLQSLEQGAQEESRCQRCISE----------LKDIRLQLEACETRT 1140 Query: 431 RRSLLQPLWRHVQRRQDERGAE 366 L PL + R +R AE Sbjct: 1141 VHRLRLPLDKEPARECAQRIAE 1162
>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)| Length = 515 Score = 30.8 bits (68), Expect = 3.3 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +1 Query: 145 SSKDPWGYCTSRKPIRTSPGRIHPTGHPQMSGFP--HAKHLLPSTPPSIP 288 S D G S K ++T G+ + H + + H++H P TPPS+P Sbjct: 20 SRSDTQGSIKSLKSLKTVLGKGKDSNHDRRTSTDTTHSRHRYPETPPSLP 69
>PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediate| filament-associated protein) (IFAP300) (Fragment) Length = 4473 Score = 30.8 bits (68), Expect = 3.3 Identities = 26/82 (31%), Positives = 36/82 (43%) Frame = -2 Query: 611 ERAIGASAHRHSEEILQSRLQRREEPGEARRCVCDHGRPARRWRRFRDGRLCHAVPELRT 432 ER G S RH +++LQS Q +E +RC+ + +D RL E RT Sbjct: 881 EREYG-SCSRHYQQLLQSLEQGEQEESRCQRCISE----------LKDIRLQLEACETRT 929 Query: 431 RRSLLQPLWRHVQRRQDERGAE 366 L PL + R +R AE Sbjct: 930 VHRLRLPLDKEPARECAQRIAE 951
>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)| Length = 4687 Score = 30.4 bits (67), Expect = 4.2 Identities = 26/82 (31%), Positives = 36/82 (43%) Frame = -2 Query: 611 ERAIGASAHRHSEEILQSRLQRREEPGEARRCVCDHGRPARRWRRFRDGRLCHAVPELRT 432 ER G S RH +++LQS Q +E +RC+ + +D RL E RT Sbjct: 1095 EREYG-SCSRHYQQLLQSLEQGEQEESRCQRCISE----------LKDIRLQLEACETRT 1143 Query: 431 RRSLLQPLWRHVQRRQDERGAE 366 L PL + R +R AE Sbjct: 1144 VHRLRLPLDKDPARECAQRIAE 1165
>CH10_HELPY (P0A0R3) 10 kDa chaperonin (Protein Cpn10) (groES protein) (Heat| shock protein 10) Length = 118 Score = 30.0 bits (66), Expect = 5.6 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +2 Query: 410 EVVAMNVEYAVPELRGKVGHLGIAATCEPAFHDHIH 517 E+V EY V EL +G +G + C HDH H Sbjct: 69 EIVLDGTEYMVLELEDILGIVGSGSCCHTGNHDHKH 104
>CH10_HELPJ (P0A0R4) 10 kDa chaperonin (Protein Cpn10) (groES protein) (Heat| shock protein 10) Length = 118 Score = 30.0 bits (66), Expect = 5.6 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +2 Query: 410 EVVAMNVEYAVPELRGKVGHLGIAATCEPAFHDHIH 517 E+V EY V EL +G +G + C HDH H Sbjct: 69 EIVLDGTEYMVLELEDILGIVGSGSCCHTGNHDHKH 104
>VGLH_EBV (P03231) Glycoprotein GP85 precursor| Length = 706 Score = 30.0 bits (66), Expect = 5.6 Identities = 19/54 (35%), Positives = 27/54 (50%) Frame = -3 Query: 271 WKVGGASREENQTFVDAQLDVYGQATFGWAFWTYSNPKDPYWSLKSLIKDGNIT 110 W+VG AS E V LD+ G A+ WT K P S ++L ++ N+T Sbjct: 13 WEVGAASLSE----VKLHLDIEGHASHYTIPWTELMAKVPGLSPEALWREANVT 62
>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump| 9) Length = 954 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +2 Query: 161 GVTVRPESPSERRLAVYIQLGI-HKCLVFLTRSTSYLPLRRP 283 GV +P E AVY+Q+ I + L+F+TRS S+ + RP Sbjct: 747 GVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSWSYVERP 788
>SYFB_ANAVT (Q3MAZ7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 810 Score = 29.3 bits (64), Expect = 9.5 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = +2 Query: 275 RRPFPNKDKCAVCPYQ--ALEVVSLVCG 352 R+P PN DK +VC A E +++VCG Sbjct: 53 RQPHPNADKLSVCQVDVGATETLNIVCG 80
>UL03_HHV11 (P10187) Protein UL3| Length = 235 Score = 29.3 bits (64), Expect = 9.5 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Frame = -2 Query: 599 GASAHRHSEEILQSRLQRREEPGEAR---RCVCDHGRPARRWRRFRDGRLCHAVPELRTR 429 G A R ++ + L +R R R V +P + + R DGRLC AVP Sbjct: 155 GTRAPRSNKSLQMFVLCKRAHAARVREQLRVVIQSRKPRKYYTRSSDGRLCPAVPVFVHE 214 Query: 428 RSLLQPLWRHVQRRQDERGAE 366 +P+ H GAE Sbjct: 215 FVSSEPMRLHRDNVMLASGAE 235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,907,936 Number of Sequences: 219361 Number of extensions: 2029345 Number of successful extensions: 7246 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 6922 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7238 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
