| Clone Name | rbags1o01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BC090190.1| Xenopus laevis cDNA clone IMAGE:6326555, partial cds Length = 1451 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 108 actgtaatgttgccatctttgatcaa 133 |||||| ||||||||||||||||||| Sbjct: 526 actgtagtgttgccatctttgatcaa 501
>gb|AC146316.3| Microcebus murinus clone CH257-437M14, complete sequence Length = 274705 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tgttgccatctttgatcaaactctt 139 |||||||| |||||||||||||||| Sbjct: 254235 tgttgccagctttgatcaaactctt 254259
>ref|XM_368176.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01068.4) partial mRNA Length = 4038 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 559 ctttgtagtatttcttcagag 579 ||||||||||||||||||||| Sbjct: 1084 ctttgtagtatttcttcagag 1064
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tgttgccatctttgatcaaactctt 139 |||||||| |||||||||||||||| Sbjct: 825726 tgttgccagctttgatcaaactctt 825750
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 aagtcttatataacacaaccaaaa 66 |||||||||| ||||||||||||| Sbjct: 62749 aagtcttatagaacacaaccaaaa 62726
>gb|DQ443407.1| Bombyx mori estrogen sulfotransferase mRNA, complete cds Length = 1508 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 ctttgtagtatttcttcaga 578 |||||||||||||||||||| Sbjct: 147 ctttgtagtatttcttcaga 128
>emb|AL451105.13| Human DNA sequence from clone RP11-212D3 on chromosome X Contains a SAR1a gene homolog 1 (S. cerevisiae) (SARA1) pseudogene, two novel genes and a chromosome 14 open reading frame 116 (C14orf116) pseudogene, complete sequence Length = 125288 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ggtactgtaatgttgccatctttg 128 |||| ||||||||||||||||||| Sbjct: 84230 ggtaatgtaatgttgccatctttg 84253
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaggatccttggggttactg 170 |||||||||||||||||||| Sbjct: 498233 aaggatccttggggttactg 498252
>emb|AL137000.6| Human DNA sequence from clone RP11-203I16 on chromosome 13 Contains the gene for KIAA0970 protein, the COX7CP1 cytochrome c oxidase subunit VIIc pseudogene 1, a novel pseudogene, the GPR38 gene for G protein-coupled receptor 38 and a CpG island, complete sequence Length = 163284 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 aataagtcttatataacaca 59 |||||||||||||||||||| Sbjct: 11055 aataagtcttatataacaca 11036
>gb|AY003872.1| Plasmodium vivax YAC 1H14, complete sequence Length = 199866 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 tgtagtatttcttcagagtg 581 |||||||||||||||||||| Sbjct: 179841 tgtagtatttcttcagagtg 179860
>gb|AC091332.8| Mus musculus chromosome 17, clone RP23-12K1, complete sequence Length = 216370 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttttgtggtactgtaatgtt 118 |||||||||||||||||||| Sbjct: 42841 ttttgtggtactgtaatgtt 42860 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,060,685 Number of Sequences: 3902068 Number of extensions: 4060685 Number of successful extensions: 63281 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63237 Number of HSP's gapped (non-prelim): 44 length of query: 612 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 589 effective length of database: 17,143,297,704 effective search space: 10097402347656 effective search space used: 10097402347656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)