ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags1n20 |
|---|---|
| Clone Library Name | barley_pub |
>COX2_TRYCR (P98023) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide II) Length = 210 Score = 41.2 bits (95), Expect = 0.002 Identities = 28/84 (33%), Positives = 45/84 (53%) Frame = +1 Query: 352 LKFILPSWIPVLLDHLCFLLFSFKDYLCIWVCVMLPFKILSFVNNNKKQPASSWSIFWSF 531 + FIL W+ L+D + LL SF ++C+W+CV+L +L N +W S Sbjct: 1 MSFILSFWMIFLIDSVIVLL-SFVCFVCVWICVLLLSTVLFVTKINNIY--CTWDFVSS- 56 Query: 532 LYFIDTIHAFFLHVVFLERLICRL 603 F+DT + F + V+F+ L+ RL Sbjct: 57 -KFVDT-YWFVIGVMFIMCLLLRL 78
>FA62A_MOUSE (Q3U7R1) Protein FAM62A (Membrane bound C2 domain-containing protein)| Length = 1092 Score = 40.4 bits (93), Expect = 0.004 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 16/157 (10%) Frame = -2 Query: 573 DMEKESVDGVDEVQKAPE---NTPAGG----GLLFVVVHEAQDLEGKHH---------TN 442 D ++ES++ V P TP +L + V EAQDL K ++ Sbjct: 603 DWDRESLETGSSVDAPPRPYHTTPNSHFGTENVLRIHVLEAQDLIAKDRFLGGLVKGKSD 662 Query: 441 PYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGKKGILHGKE 262 PY K+ ++ +PRW + FE + P +L +EV K L + Sbjct: 663 PYVKLKVAGKSFRTHVVREDLNPRWNEVFEVIVTSIP-GQELEIEVFDKD-----LDKDD 716 Query: 261 ALGYIDITLADVISNKRINEKFHLIDSKNGQIQIELQ 151 LG ++L V+++ ++E L D +G++ + L+ Sbjct: 717 FLGRYKVSLTTVLNSGFLDEWLTLEDVPSGRLHLRLE 753 Score = 35.0 bits (79), Expect = 0.18 Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 3/142 (2%) Frame = -2 Query: 567 EKESVDGVDEVQKAPENTPAGGGLLFVVVHEAQDL---EGKHHTNPYAKIIFXXXXXXXX 397 E E V V+ + + +++ LL V + A+DL +G +PYA I Sbjct: 763 ELEEVLQVNSLIQTQKSSELAAALLSVFLERAEDLPLRKGTKPPSPYATITVGETSHKTK 822 Query: 396 XXXKNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLADVISN 217 ++ P WE+ F+ +P + L ++V + G LG + + L++++ Sbjct: 823 TVSQSSAPVWEESASFLIRKPHA-ESLELQVRGE--------GTGTLGSVSLPLSELLQE 873 Query: 216 KRINEKFHLIDSKNGQIQIELQ 151 ++ S GQ+ + Q Sbjct: 874 DQLCLDHWFALSGQGQVLMRAQ 895 Score = 33.5 bits (75), Expect = 0.51 Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 6/129 (4%) Frame = -2 Query: 513 PAGGGLLFVVVHEAQDL---EGKHHTNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVC 343 P +L V + AQDL +G NP ++ P WE+ F F Sbjct: 464 PPSAAILVVYLDRAQDLPLKKGNKEPNPMVQLSVQDVTRESKATYSTNSPVWEEAFRFFL 523 Query: 342 EEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLADVI--SNKRINEKFHLIDS-KNG 172 ++P + + ++V K + + LG + + LA ++ S +++ F L S N Sbjct: 524 QDPRSQE---LDVQVKDDSRAL-----TLGALTLPLARLLTASELTLDQWFQLSSSGPNS 575 Query: 171 QIQIELQWR 145 ++ ++L R Sbjct: 576 RLYMKLVMR 584
>FA62A_PONPY (Q5RAG2) Protein FAM62A| Length = 1104 Score = 40.0 bits (92), Expect = 0.005 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 9/125 (7%) Frame = -2 Query: 498 LLFVVVHEAQDLEGKHH---------TNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFV 346 +L + V EAQDL K ++PY K+ ++ +PRW + FE + Sbjct: 648 VLRIHVLEAQDLIAKDRFLGGLVKGKSDPYVKLKLAGRSFRSHVVREDLNPRWNEVFEVI 707 Query: 345 CEEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLADVISNKRINEKFHLIDSKNGQI 166 P +L VEV K L + LG ++L V+++ ++E L D +G++ Sbjct: 708 VTSVP-GQELEVEVFDKD-----LDKDDFLGRCKVSLTTVLNSGFLDEWLTLEDVPSGRL 761 Query: 165 QIELQ 151 + L+ Sbjct: 762 HLRLE 766 Score = 39.7 bits (91), Expect = 0.007 Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 4/143 (2%) Frame = -2 Query: 567 EKESVDGVDEVQKAPENTPAGGGLLFVVVHEAQDL---EGKHHTNPYAKIIFXXXXXXXX 397 E E V V+ + + ++ LL + + A+DL +G H +PYA + Sbjct: 776 ELEEVLQVNSLIQTQKSAELAAALLSIYMERAEDLPLRKGTKHPSPYATLTVGDTSHKTK 835 Query: 396 XXXKNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLAD-VIS 220 + P W++ F+ +P T + L ++V + G LG + + L++ +++ Sbjct: 836 TVSQTSAPVWDESASFLIRKPHT-ENLELQVRGE--------GTGVLGSLSLPLSELLVA 886 Query: 219 NKRINEKFHLIDSKNGQIQIELQ 151 ++ +++ ++S GQ+ + Q Sbjct: 887 DQLCLDRWFTLNSGQGQVLLRAQ 909 Score = 33.9 bits (76), Expect = 0.39 Identities = 25/106 (23%), Positives = 48/106 (45%) Frame = -2 Query: 465 LEGKHHTNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGK 286 +EGK ++PYA + + +P+W + +E + E P ++ VEV K Sbjct: 352 IEGK--SDPYALVRLGTQTFCSRVIDEELNPQWGETYEVMVHEVP-GQEIEVEVFDKDPD 408 Query: 285 KGILHGKEALGYIDITLADVISNKRINEKFHLIDSKNGQIQIELQW 148 K + LG + + + V+ +++ F L GQ+ + L+W Sbjct: 409 K-----DDFLGRMKLDVGKVLQAGVLDDWFPL-QGGQGQVHLRLEW 448 Score = 33.5 bits (75), Expect = 0.51 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 4/109 (3%) Frame = -2 Query: 618 GQIILEATYKPFKEDDMEKESVDGVDE-VQKAPENTPAGGGLLFVVVHEAQDL---EGKH 451 GQ+ L + D + E V ++ V PE P +L V + AQDL +G Sbjct: 440 GQVHLRLEWLSLLSDAEKLEQVLQWNQGVSSRPE--PPSAAILVVYLDRAQDLPLKKGNK 497 Query: 450 HTNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVCEEPPTNDKLHVEV 304 NP ++ P WE+ F F ++P + + L V+V Sbjct: 498 EPNPMVQLSIQDVTQESKAVYSTNCPVWEEAFRFFLQDPQSQE-LDVQV 545
>FA62A_HUMAN (Q9BSJ8) Protein FAM62A (Membrane bound C2 domain-containing protein)| Length = 1104 Score = 39.3 bits (90), Expect = 0.009 Identities = 29/143 (20%), Positives = 64/143 (44%), Gaps = 4/143 (2%) Frame = -2 Query: 567 EKESVDGVDEVQKAPENTPAGGGLLFVVVHEAQDL---EGKHHTNPYAKIIFXXXXXXXX 397 E E V V+ + + ++ LL + + A+DL +G H +PYA + Sbjct: 776 ELEEVLQVNSLIQTQKSAELAAALLSIYMERAEDLPLRKGTKHLSPYATLTVGDSSHKTK 835 Query: 396 XXXKNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLAD-VIS 220 + P W++ F+ +P T + L ++V + G LG + + L++ +++ Sbjct: 836 TISQTSAPVWDESASFLIRKPHT-ESLELQVRGE--------GTGVLGSLSLPLSELLVA 886 Query: 219 NKRINEKFHLIDSKNGQIQIELQ 151 ++ +++ + S GQ+ + Q Sbjct: 887 DQLCLDRWFTLSSGQGQVLLRAQ 909 Score = 39.3 bits (90), Expect = 0.009 Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 9/125 (7%) Frame = -2 Query: 498 LLFVVVHEAQDLEGKHH---------TNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFV 346 +L + V EAQDL K ++PY K+ ++ +PRW + FE + Sbjct: 648 VLRIHVLEAQDLIAKDRFLGGLVKGKSDPYVKLKLAGRSFRSHVVREDLNPRWNEVFEVI 707 Query: 345 CEEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLADVISNKRINEKFHLIDSKNGQI 166 P +L VEV K L + LG + L V+++ ++E L D +G++ Sbjct: 708 VTSVP-GQELEVEVFDKD-----LDKDDFLGRCKVRLTTVLNSGFLDEWLTLEDVPSGRL 761 Query: 165 QIELQ 151 + L+ Sbjct: 762 HLRLE 766 Score = 34.7 bits (78), Expect = 0.23 Identities = 25/106 (23%), Positives = 48/106 (45%) Frame = -2 Query: 465 LEGKHHTNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGK 286 +EGK ++PYA + + +P+W + +E + E P ++ VEV K Sbjct: 352 IEGK--SDPYALVRLGTQTFCSRVIDEELNPQWGETYEVMVHEVP-GQEIEVEVFDKDPD 408 Query: 285 KGILHGKEALGYIDITLADVISNKRINEKFHLIDSKNGQIQIELQW 148 K + LG + + + V+ +++ F L GQ+ + L+W Sbjct: 409 K-----DDFLGRMKLDVGKVLQASVLDDWFPL-QGGQGQVHLRLEW 448 Score = 32.0 bits (71), Expect = 1.5 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%) Frame = -2 Query: 513 PAGGGLLFVVVHEAQDL---EGKHHTNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVC 343 P +L V + AQDL +G NP ++ P WE+ F F Sbjct: 474 PPSAAILVVYLDRAQDLPLKKGNKEPNPMVQLSIQDVTQESKAVYSTNCPVWEEAFRFFL 533 Query: 342 EEPPTNDKLHVEV 304 ++P + + L V+V Sbjct: 534 QDPQSQE-LDVQV 545
>FA62A_RAT (Q9Z1X1) Protein FAM62A (Membrane bound C2 domain-containing protein)| (vp115) Length = 1088 Score = 38.5 bits (88), Expect = 0.016 Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 13/155 (8%) Frame = -2 Query: 576 DDMEKESVDGVDEVQKAPENTPAGG----GLLFVVVHEAQDLEGKHH---------TNPY 436 D E+ VD + TP +L + V EAQDL K ++PY Sbjct: 607 DSESPETGSSVDAPPRPYHTTPNSHFGTENVLRIHVLEAQDLIAKDRFLGGLVKGKSDPY 666 Query: 435 AKIIFXXXXXXXXXXXKNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGKKGILHGKEAL 256 K+ ++ +PRW + FE + P +L +EV K L + L Sbjct: 667 VKLKVAGRSLRTHVVREDLNPRWNEVFEVIVTSIP-GQELDIEVFDKD-----LDKDDFL 720 Query: 255 GYIDITLADVISNKRINEKFHLIDSKNGQIQIELQ 151 G + L V+++ ++E L D +G++ + L+ Sbjct: 721 GRYKVGLTTVLNSGFLDEWLTLEDVPSGRLHLRLE 755 Score = 33.1 bits (74), Expect = 0.67 Identities = 29/142 (20%), Positives = 60/142 (42%), Gaps = 3/142 (2%) Frame = -2 Query: 567 EKESVDGVDEVQKAPENTPAGGGLLFVVVHEAQDL---EGKHHTNPYAKIIFXXXXXXXX 397 E E V V+ + + +++ LL V + ++DL +G +PYA + Sbjct: 765 ELEEVLQVNSLIQTQKSSELAAALLSVYLERSEDLPLRKGTKPPSPYAILTVGETSHKTK 824 Query: 396 XXXKNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLADVISN 217 + P WE+ F+ +P + L ++V + G LG I + L++++ Sbjct: 825 TVSQTSAPIWEESASFLIRKPHA-ESLELQVRGE--------GTGTLGSISLPLSELLQE 875 Query: 216 KRINEKFHLIDSKNGQIQIELQ 151 +++ S GQ+ + +Q Sbjct: 876 EQLCLDRWFALSGQGQVLMRVQ 897 Score = 32.3 bits (72), Expect = 1.1 Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 6/129 (4%) Frame = -2 Query: 513 PAGGGLLFVVVHEAQDL---EGKHHTNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVC 343 P +L V + AQDL +G NP ++ P WE+ F F Sbjct: 466 PPSAAILVVYLDRAQDLPLKKGNKEPNPMVQLSVQDVTQESKATYSTNCPVWEEAFRFFL 525 Query: 342 EEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLADVI--SNKRINEKFHLIDS-KNG 172 ++P + + ++V K + + LG + + LA ++ S +++ F L S N Sbjct: 526 QDPRSQE---LDVQVKDDSRAL-----TLGALTLPLARLLTASELTLDQWFQLSSSGPNS 577 Query: 171 QIQIELQWR 145 ++ ++L R Sbjct: 578 RLYMKLVMR 586
>COX2_TRYBB (P04372) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide II) Length = 210 Score = 38.1 bits (87), Expect = 0.021 Identities = 26/84 (30%), Positives = 44/84 (52%) Frame = +1 Query: 352 LKFILPSWIPVLLDHLCFLLFSFKDYLCIWVCVMLPFKILSFVNNNKKQPASSWSIFWSF 531 + FIL W+ L+D + +L SF +L +W+C ++ +L+ N +W S Sbjct: 1 MSFILTFWMIFLMDSI-IVLISFSIFLSVWICALIIATVLTVTKINNIY--CTWDFISS- 56 Query: 532 LYFIDTIHAFFLHVVFLERLICRL 603 FIDT + F L ++F+ L+ RL Sbjct: 57 -KFIDT-YWFVLGMMFILCLLLRL 78
>RASA1_BOVIN (P09851) Ras GTPase-activating protein 1 (GTPase-activating| protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP) Length = 1044 Score = 37.7 bits (86), Expect = 0.027 Identities = 20/70 (28%), Positives = 32/70 (45%) Frame = -2 Query: 495 LFVVVHEAQDLEGKHHTNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVCEEPPTNDKL 316 L + + EA L KH TNPY I + ++P W +EF F + PP ++ Sbjct: 593 LILHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVF-DDLPPDINRF 651 Query: 315 HVEVLSKAGK 286 + + +K K Sbjct: 652 EITLSNKTKK 661
>RASA1_RAT (P50904) Ras GTPase-activating protein 1 (GTPase-activating| protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP) Length = 1038 Score = 37.4 bits (85), Expect = 0.035 Identities = 20/70 (28%), Positives = 32/70 (45%) Frame = -2 Query: 495 LFVVVHEAQDLEGKHHTNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVCEEPPTNDKL 316 L + + EA L KH TNPY I + ++P W +EF F + PP ++ Sbjct: 587 LVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVF-DDLPPDINRF 645 Query: 315 HVEVLSKAGK 286 + + +K K Sbjct: 646 EITLSNKTKK 655
>RASA1_HUMAN (P20936) Ras GTPase-activating protein 1 (GTPase-activating| protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP) Length = 1047 Score = 37.4 bits (85), Expect = 0.035 Identities = 20/70 (28%), Positives = 32/70 (45%) Frame = -2 Query: 495 LFVVVHEAQDLEGKHHTNPYAKIIFXXXXXXXXXXXKNRDPRWEDEFEFVCEEPPTNDKL 316 L + + EA L KH TNPY I + ++P W +EF F + PP ++ Sbjct: 596 LVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVF-DDLPPDINRF 654 Query: 315 HVEVLSKAGK 286 + + +K K Sbjct: 655 EITLSNKTKK 664
>COX2_LEITA (P14545) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide II) Length = 210 Score = 35.0 bits (79), Expect = 0.18 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = +1 Query: 352 LKFILPSWIPVLLDHLCFLLFSFKDYLCIWVCVMLPFKIL--SFVNN 486 + FIL W+ LLD + LL SF ++C+W+C +L +L S +NN Sbjct: 1 MAFILSFWMIFLLDSVIVLL-SFVCFVCVWICALLFSTVLLVSKLNN 46
>UN13A_RAT (Q62768) Unc-13 homolog A (Munc13-1)| Length = 1735 Score = 32.3 bits (72), Expect = 1.1 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%) Frame = -2 Query: 534 QKAPENTPAGGGLLFVVVHEAQDLEGKHHT---NPYAKIIFXXXXXXXXXXXKNRDPRWE 364 Q + T + + V AQ L+ K T +PY + N +P WE Sbjct: 678 QSVLDGTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWE 737 Query: 363 DEFEFVCEEPPTNDKLHVEVLSK 295 + F F C ++D++ V VL + Sbjct: 738 ENFHFECHN--SSDRIKVRVLDE 758
>HRSA_ECOLI (P54745) Heat-responsive suppressor hrsA (Putative PTS system| EIIABC component) [Includes: Phosphotransferase enzyme IIA component (EC 2.7.1.-) (PTS system EIIA component); Phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system EIIB Length = 658 Score = 31.6 bits (70), Expect = 1.9 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -2 Query: 195 HLIDSKNGQIQIELQWRTS*KL*ARCQNARASQGTERVHSMKQQLA 58 H D KN Q++I + T A C NAR + E +H++ Q+LA Sbjct: 8 HWRDYKNDQVRIMMNLTTLTHRDALCLNARFTSREEAIHALTQRLA 53
>UN13B_HUMAN (O14795) Unc-13 homolog B (Munc13-2) (munc13)| Length = 1591 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Frame = -2 Query: 534 QKAPENTPAGGGLLFVVVHEAQDLEGKHHT---NPYAKIIFXXXXXXXXXXXKNRDPRWE 364 Q + T + + V AQ L+ K T +PY + N +P WE Sbjct: 589 QSVLDGTSKWSAKITITVVCAQGLQAKDKTGSSDPYVTVQVSKTKKRTKTIFGNLNPVWE 648 Query: 363 DEFEFVCEEPPTNDKLHVEV 304 ++F F C ++D++ V V Sbjct: 649 EKFHFECHN--SSDRIKVRV 666
>UN13B_MOUSE (Q9Z1N9) Unc-13 homolog B (Munc13-2) (munc13)| Length = 1591 Score = 30.8 bits (68), Expect = 3.3 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Frame = -2 Query: 534 QKAPENTPAGGGLLFVVVHEAQDLEGKHHT---NPYAKIIFXXXXXXXXXXXKNRDPRWE 364 Q + T + + V AQ L+ K T +PY + N +P WE Sbjct: 589 QSVLDGTSKWSAKITITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIFGNLNPVWE 648 Query: 363 DEFEFVCEEPPTNDKLHVEV 304 ++F F C ++D++ V V Sbjct: 649 EKFHFECHN--SSDRIKVRV 666
>NU5M_TRYBB (P04540) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 590 Score = 30.8 bits (68), Expect = 3.3 Identities = 29/114 (25%), Positives = 50/114 (43%) Frame = +1 Query: 241 YINVAQGFLAMQYSFLSSFA*DFNMQLIICRWFLANKLKFILPSWIPVLLDHLCFLLFSF 420 +I++ F M Y++ F F M + C F L + +L D+ C L++ Sbjct: 413 FISIIFIFFTMIYNYFLLF---FLMFVFKC---------FCLVDCLFLLFDYECCLVYCL 460 Query: 421 KDYLCIWVCVMLPFKILSFVNNNKKQPASSWSIFWSFLYFIDTIHAFFLHVVFL 582 + +++C++ F I+ FV SS+ +FWSF + VVFL Sbjct: 461 ---ISLYMCILSIFFIIDFVCIFV---FSSYCVFWSFFLNFYNFFDIAIFVVFL 508
>UN13B_RAT (Q62769) Unc-13 homolog B (Munc13-2)| Length = 1622 Score = 30.8 bits (68), Expect = 3.3 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Frame = -2 Query: 534 QKAPENTPAGGGLLFVVVHEAQDLEGKHHT---NPYAKIIFXXXXXXXXXXXKNRDPRWE 364 Q + T + + V AQ L+ K T +PY + N +P WE Sbjct: 602 QSVLDGTSKWSAKITITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIFGNLNPVWE 661 Query: 363 DEFEFVCEEPPTNDKLHVEV 304 ++F F C ++D++ V V Sbjct: 662 EKFHFECHN--SSDRIKVRV 679
>RPGR1_MOUSE (Q9EPQ2) X-linked retinitis pigmentosa GTPase regulator-interacting| protein 1 (RPGR-interacting protein 1) Length = 1331 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -2 Query: 258 LGYIDITLADVISNKRINEKFHLIDS---KNGQIQIELQWRT 142 LG + L + NK I F+L DS NG I+++L W++ Sbjct: 850 LGRAQVPLLPLAQNKSIKGDFNLTDSGEKSNGSIKVQLDWKS 891
>UN13A_HUMAN (Q9UPW8) Unc-13 homolog A (Munc13-1)| Length = 1703 Score = 30.4 bits (67), Expect = 4.3 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Frame = -2 Query: 534 QKAPENTPAGGGLLFVVVHEAQDLEGKHHT---NPYAKIIFXXXXXXXXXXXKNRDPRWE 364 Q + T + + V AQ L+ K T +PY + N +P WE Sbjct: 665 QSVLDGTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWE 724 Query: 363 DEFEFVCEEPPTNDKLHVEV 304 + F F C ++D++ V V Sbjct: 725 ENFHFECHN--SSDRIKVRV 742
>PP16B_CUCMA (Q9ZT46) 16 kDa phloem protein 2| Length = 137 Score = 30.4 bits (67), Expect = 4.3 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Frame = -2 Query: 444 NPYAKIIFXXXXXXXXXXX-KNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGKKGILHG 268 +PYA+I F DP W ++F+F+ E P + H +L K + G Sbjct: 26 DPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFLVEYPGSGGDFH--ILFKVMDHDAIDG 83 Query: 267 KEALGYIDITLADVIS 220 + +G + I + ++++ Sbjct: 84 DDYIGDVKIDVQNLLA 99
>TOP1_METJA (Q59046) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 761 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -1 Query: 136 EAVSKVPKCSGITRYREGSFHEAAACKYL*WTPCRY 29 E V K PKC G REG F + C + CRY Sbjct: 716 EVVGKCPKCGGDLVVREGKFGKFVGCSN--YPKCRY 749
>YCF1_OENHO (Q9MTH5) Hypothetical 287.9 kDa protein ycf1| Length = 2434 Score = 30.0 bits (66), Expect = 5.7 Identities = 19/89 (21%), Positives = 45/89 (50%) Frame = +1 Query: 346 NKLKFILPSWIPVLLDHLCFLLFSFKDYLCIWVCVMLPFKILSFVNNNKKQPASSWSIFW 525 NK+ F+L S++ L+ H+ L+ + + +W+ ++ K + ++ N PA+ + I Sbjct: 161 NKMLFVLSSFVGWLIGHI--LVLKWAGLVFVWLLQVIRSKTMKYITCNVLIPATKYIIEK 218 Query: 526 SFLYFIDTIHAFFLHVVFLERLICRLQNN 612 F+ + L + +E + R++N+ Sbjct: 219 WRNSFVAGLIREILAMKQVESALVRIKNS 247
>PP16A_CUCMA (Q9ZT47) 16 kDa phloem protein 1| Length = 149 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Frame = -2 Query: 444 NPYAKIIFXXXXXXXXXXX-KNRDPRWEDEFEFVCEEPPTNDKLHVEVLSKAGKKGILHG 268 +PYA+I F +P W+++F+F+ E P + H +L K + G Sbjct: 26 DPYAEINFKGQERMSKVAKNAGPNPLWDEKFKFLAEYPGSGGDFH--ILFKVMDHDAIDG 83 Query: 267 KEALGYIDITLADVIS 220 + +G + I + ++++ Sbjct: 84 DDYIGDVKIDVKNLLA 99
>MRAY_CHLCV (Q821S0) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 348 Score = 30.0 bits (66), Expect = 5.7 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = -2 Query: 618 GQIILEATYKPFKEDDMEKESVDGVDEVQKAPENTPAGGGLLFVVV 481 G+ ++ K D + KE + ++ + + +NTP GG+LF +V Sbjct: 31 GRPVISWLKKQNHYDQVHKEHCEKLEALHQDKKNTPTAGGILFCIV 76
>UN13C_HUMAN (Q8NB66) Unc-13 homolog C (Munc13-3) (Fragment)| Length = 1190 Score = 29.6 bits (65), Expect = 7.4 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Frame = -2 Query: 534 QKAPENTPAGGGLLFVVVHEAQDLEGKHHT---NPYAKIIFXXXXXXXXXXXKNRDPRWE 364 Q + T + + V AQ L+ K T +PY + N +P W+ Sbjct: 185 QSVLDGTSKWSAKITITVVSAQGLQAKDKTGSSDPYVTVQVGKNKRRTKTIFGNLNPVWD 244 Query: 363 DEFEFVCEEPPTNDKLHVEV 304 ++F F C + D++ V V Sbjct: 245 EKFYFECHN--STDRIKVRV 262
>UN13C_RAT (Q62770) Unc-13 homolog C (Munc13-3)| Length = 2204 Score = 29.6 bits (65), Expect = 7.4 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Frame = -2 Query: 534 QKAPENTPAGGGLLFVVVHEAQDLEGKHHT---NPYAKIIFXXXXXXXXXXXKNRDPRWE 364 Q + T + + V AQ L+ K T +PY + N +P W+ Sbjct: 1199 QSVLDGTSKWSAKITITVVSAQGLQAKDKTGSSDPYVTVQVGKNKRRTKTIFGNLNPVWD 1258 Query: 363 DEFEFVCEEPPTNDKLHVEV 304 ++F F C + D++ V V Sbjct: 1259 EKFYFECHN--STDRIKVRV 1276
>YCF1_OENBE (P31563) Hypothetical protein ycf1 (ORF 1005) (Fragment)| Length = 1005 Score = 29.6 bits (65), Expect = 7.4 Identities = 19/89 (21%), Positives = 44/89 (49%) Frame = +1 Query: 346 NKLKFILPSWIPVLLDHLCFLLFSFKDYLCIWVCVMLPFKILSFVNNNKKQPASSWSIFW 525 NK+ F+L S++ L+ H+ L+ + + +W+ + K + ++ N PA+ + I Sbjct: 168 NKMLFVLSSFVGWLIGHI--LVLKWAGLVFVWLLKFIRSKTMKYITCNVLIPATKYIIEK 225 Query: 526 SFLYFIDTIHAFFLHVVFLERLICRLQNN 612 F+ + L + +E + R++N+ Sbjct: 226 WRNSFVAGLIREILAMKQVESALVRIKNS 254
>FRDC_HAEIN (P44892) Fumarate reductase subunit C| Length = 132 Score = 29.6 bits (65), Expect = 7.4 Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = +1 Query: 340 LANKLKFILP---SWIPVLLDHLCFLLFSFKDYLCIWVCVMLPFKILSFVNNNKKQPASS 510 ++ + K++ P +W L + ++L +W C++L + +L F +N P Sbjct: 1 MSKRKKYVRPMTATWWQKLDFYKAYMLREATSVFAVWFCIVLLYGVLCFASN----PMPG 56 Query: 511 WSIFWSFLYFIDTIHAFFLHVVFL 582 I SF+ F+ FL+++ L Sbjct: 57 LGIL-SFIEFLRNPIVVFLNIITL 79
>GLNA_PYRWO (P36687) Glutamine synthetase 1 (EC 6.3.1.2) (Glutamine synthetase| I) (Glutamate--ammonia ligase) (GSI) Length = 439 Score = 29.3 bits (64), Expect = 9.7 Identities = 16/68 (23%), Positives = 28/68 (41%) Frame = -2 Query: 354 EFVCEEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLADVISNKRINEKFHLIDSKN 175 E+ C +P N + KAG GI H + Y++ + ++ KR + Sbjct: 318 EYRCPDPSANPYFAFAAVLKAGLDGIKHKIDPFAYVEENVYEMSEEKRKELGIETLPGSL 377 Query: 174 GQIQIELQ 151 G+ EL+ Sbjct: 378 GEALEELE 385
>GLNA_PYRFU (Q05907) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 439 Score = 29.3 bits (64), Expect = 9.7 Identities = 16/68 (23%), Positives = 28/68 (41%) Frame = -2 Query: 354 EFVCEEPPTNDKLHVEVLSKAGKKGILHGKEALGYIDITLADVISNKRINEKFHLIDSKN 175 E+ C +P N + KAG GI H + Y++ + ++ KR + Sbjct: 318 EYRCPDPSANPYFAFAAVLKAGLDGIKHKIDPFAYVEENVYEMSEEKRKELGIETLPGSL 377 Query: 174 GQIQIELQ 151 G+ EL+ Sbjct: 378 GEALEELE 385
>KL61_DROME (P46863) Bipolar kinesin KRP-130 (Kinesin-like protein Klp61F)| Length = 1066 Score = 29.3 bits (64), Expect = 9.7 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = -2 Query: 324 DKLHVEVLSKAGKKGILHGKEALGYIDITLADVISNKRINEKFHLIDSKNGQIQ 163 DKL ++++ K GI +E G +ITL N+ +NEK L+ + ++Q Sbjct: 380 DKLKRDLMAARDKNGIYLAEETYG--EITLKLESQNRELNEKMLLLKALKDELQ 431
>GR64B_DROME (P83294) Putative gustatory receptor 64b| Length = 406 Score = 29.3 bits (64), Expect = 9.7 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = +3 Query: 42 VHYRYLQAAASWNEPSLYLVMPEHFGTL 125 ++ Y ++ W P LY+++P HF L Sbjct: 166 INVTYFESIYKWERPHLYMILPYHFWML 193
>SUVH3_ARATH (Q9C5P4) Histone-lysine N-methyltransferase, H3 lysine-9 specific| SUVH3 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3) (H3-K9-HMTase 3) (Suppressor of variegation 3-9 homolog protein 3) (Su(var)3-9 homolog protein 3) (Protein SET DOMAIN GR Length = 669 Score = 29.3 bits (64), Expect = 9.7 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 Query: 225 SRLPGLYQCSPRLPCHA 275 SR P +Y+C P PCHA Sbjct: 465 SRRPVIYECGPTCPCHA 481
>KUP_XANOR (Q5H2A5) Probable potassium transport system protein kup| Length = 635 Score = 29.3 bits (64), Expect = 9.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 328 CRWFLANKLKFILPSWIPVLLDHLCFLL 411 C +F AN +KF+ +W P+LL + F L Sbjct: 421 CAFFYANIIKFLDGAWFPLLLGLILFTL 448
>KUP_XANAC (Q8PHV1) Probable potassium transport system protein kup| Length = 634 Score = 29.3 bits (64), Expect = 9.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 328 CRWFLANKLKFILPSWIPVLLDHLCFLL 411 C +F AN +KF+ +W P+LL + F L Sbjct: 420 CAFFYANIIKFLDGAWFPLLLGLILFTL 447
>UN13C_MOUSE (Q8K0T7) Unc-13 homolog C (Munc13-3) (Fragment)| Length = 1430 Score = 29.3 bits (64), Expect = 9.7 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Frame = -2 Query: 534 QKAPENTPAGGGLLFVVVHEAQDLEGKHHT---NPYAKIIFXXXXXXXXXXXKNRDPRWE 364 Q + T + + V AQ L+ K T +PY + N +P W+ Sbjct: 1205 QSVLDGTSKWSAKITITVVSAQGLQAKDKTGSSDPYVTVQVGKNKRRTKTIFGNLNPVWD 1264 Query: 363 DEFEFVCEEPPTNDKLHVEV 304 ++F F C + D++ V V Sbjct: 1265 EKFFFECHN--STDRIKVRV 1282 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,248,851 Number of Sequences: 219361 Number of extensions: 1672977 Number of successful extensions: 4756 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4641 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4752 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
