ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags1n20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038J10, full insert sequence Length = 2145 Score = 444 bits (224), Expect = e-121 Identities = 419/484 (86%) Strand = Plus / Minus Query: 136 ctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgagatg 195 |||||||||||||||||||| ||| || |||||||| |||||||| || |||||||| || Sbjct: 1882 ctatgaagttctccactgcatctctatctgaatctgaccatttttggaatcaatgaggtg 1823 Query: 196 gaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtagcc 255 | ||||||| || |||||||||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 1822 gtacttctcattgatccgcttgttgctgatcacatctgcgaggcttatatcaatgtagcc 1763 Query: 256 caaggcttccttgccatgcaatattcctttctttccagctttgcttaggacttcaacatg 315 |||| ||||||||| || | | |||||||||| |||||| ||||| ||||||| ||| Sbjct: 1762 taaggtttccttgccgtgtatcaatcctttctttgaagctttacttagaacttcaatatg 1703 Query: 316 caacttatcatttgtaggtggttcctcgcaaacaaactcaaattcatcctcccatcgtgg 375 || ||||||||| ||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 1702 cagtttatcatttacagggggttcctcgcatacaaactcgaattcgtcctcccaccgtgg 1643 Query: 376 atccctgttcttcttgatcacctttgttttcttctcttctcctttaaagattatctttgc 435 ||||||||| |||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 1642 atccctgtttttcttgattacctttgttttcttctcttctcctttgaaaattatctttgc 1583 Query: 436 atatgggtttgtgtgatgcttcccttcaagatcttgagcttcgtgaacaacaacaaaaag 495 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| Sbjct: 1582 atatgggtttgtgtgatgctttccttcaagatcttgagcttcatgaacaacaacataaag 1523 Query: 496 cagcccgcctccagctggagtattttctggagctttctgtacttcatcgacaccatccac 555 ||| || || |||||||||||| || |||||||||| || |||| || ||| | Sbjct: 1522 cagtcctccaccagctggagtaccatcaggagctttctccaccacatcagcattatcgat 1463 Query: 556 gctttctttctccatgtcgtcttccttgaaaggcttatatgtcgcctccaaaataatctg 615 || |||||||||||| || |||||||||||||||||||||||| |||||| | ||| ||| Sbjct: 1462 gccttctttctccatatcctcttccttgaaaggcttatatgtcacctccagagtaagctg 1403 Query: 616 acca 619 |||| Sbjct: 1402 acca 1399
>dbj|AK068006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129N09, full insert sequence Length = 2303 Score = 436 bits (220), Expect = e-119 Identities = 418/484 (86%) Strand = Plus / Minus Query: 136 ctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgagatg 195 |||||||||||| ||||||| ||| || |||||||| |||||||| || |||||||| || Sbjct: 2014 ctatgaagttctacactgcatctctatctgaatctgaccatttttggaatcaatgaggtg 1955 Query: 196 gaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtagcc 255 | ||||||| || |||||||||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 1954 gtacttctcattgatccgcttgttgctgatcacatctgcgaggcttatatcaatgtagcc 1895 Query: 256 caaggcttccttgccatgcaatattcctttctttccagctttgcttaggacttcaacatg 315 |||| ||||||||| || | | |||||||||| |||||| ||||| ||||||| ||| Sbjct: 1894 taaggtttccttgccgtgtatcaatcctttctttgaagctttacttagaacttcaatatg 1835 Query: 316 caacttatcatttgtaggtggttcctcgcaaacaaactcaaattcatcctcccatcgtgg 375 || ||||||||| ||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 1834 cagtttatcatttacagggggttcctcgcatacaaactcgaattcgtcctcccaccgtgg 1775 Query: 376 atccctgttcttcttgatcacctttgttttcttctcttctcctttaaagattatctttgc 435 ||||||||| |||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 1774 atccctgtttttcttgattacctttgttttcttctcttctcctttgaaaattatctttgc 1715 Query: 436 atatgggtttgtgtgatgcttcccttcaagatcttgagcttcgtgaacaacaacaaaaag 495 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| Sbjct: 1714 atatgggtttgtgtgatgctttccttcaagatcttgagcttcatgaacaacaacataaag 1655 Query: 496 cagcccgcctccagctggagtattttctggagctttctgtacttcatcgacaccatccac 555 ||| || || |||||||||||| || |||||||||| || |||| || ||| | Sbjct: 1654 cagtcctccaccagctggagtaccatcaggagctttctccaccacatcagcattatcgat 1595 Query: 556 gctttctttctccatgtcgtcttccttgaaaggcttatatgtcgcctccaaaataatctg 615 || |||||||||||| || |||||||||||||||||||||||| |||||| | ||| ||| Sbjct: 1594 gccttctttctccatatcctcttccttgaaaggcttatatgtcacctccagagtaagctg 1535 Query: 616 acca 619 |||| Sbjct: 1534 acca 1531
>gb|AY105555.1| Zea mays PCO126486 mRNA sequence Length = 1398 Score = 299 bits (151), Expect = 6e-78 Identities = 337/399 (84%) Strand = Plus / Minus Query: 135 tctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgagat 194 |||| ||||||||||||||||||||||| || ||||| |||||||| ||||| ||||||| Sbjct: 1103 tctaggaagttctccactgcaactcgatctggatctgaccatttttcgagtctatgagat 1044 Query: 195 ggaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtagc 254 || |||| || ||||||||||||||||||||||||||||| ||| | |||||||| |||| Sbjct: 1043 ggtacttttcattaatccgcttgttgctgatcacgtctgcaaggctaatatcaatatagc 984 Query: 255 ccaaggcttccttgccatgcaatattcctttctttccagctttgcttaggacttcaacat 314 |||| | |||||||||||| | | ||| ||| ||||| |||| ||||||||||| Sbjct: 983 ccaaagtttccttgccatgtatcagccctgccttcggggctttacttatgacttcaacat 924 Query: 315 gcaacttatcatttgtaggtggttcctcgcaaacaaactcaaattcatcctcccatcgtg 374 ||| |||||||| ||| || ||||| || || |||||||| ||||||||||||| || Sbjct: 923 gcagtttatcattcacaggaggctcctcacacacgaactcaaactcatcctcccatcttg 864 Query: 375 gatccctgttcttcttgatcacctttgttttcttctcttctcctttaaagattatctttg 434 ||||||| ||||||||||| ||||| ||||||||||| || ||||| || ||||| |||| Sbjct: 863 gatccctattcttcttgatgaccttagttttcttctcctcgcctttgaaaattatttttg 804 Query: 435 catatgggtttgtgtgatgcttcccttcaagatcttgagcttcgtgaacaacaacaaaaa 494 ||||||||||||| || |||||||| ||||||||||| ||||| |||||||||||| ||| Sbjct: 803 catatgggtttgtatggtgcttcccctcaagatcttgggcttcatgaacaacaacataaa 744 Query: 495 gcagcccgcctccagctggagtattttctggagctttct 533 ||| || || ||||||||||| ||||||||||||| Sbjct: 743 gcaagccaccaccagctggagtgccatctggagctttct 705 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 559 ttctttctccatgtcgtcttccttgaaaggcttatatgt 597 ||||||||| || || ||||||||||||||||| ||||| Sbjct: 679 ttctttctctatatcttcttccttgaaaggcttgtatgt 641
>ref|NM_191103.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1599 Score = 228 bits (115), Expect = 2e-56 Identities = 193/219 (88%) Strand = Plus / Minus Query: 299 cttaggacttcaacatgcaacttatcatttgtaggtggttcctcgcaaacaaactcaaat 358 ||||||||||||||||| | || ||||||| ||| || ||||| ||||||||||||| Sbjct: 1436 cttaggacttcaacatgtagtttgtcatttgcagggggatcctcacaaacaaactcaatc 1377 Query: 359 tcatcctcccatcgtggatccctgttcttcttgatcacctttgttttcttctcttctcct 418 || ||||||||||| ||||||||||| |||||||||||||| ||||||||||| | |||| Sbjct: 1376 tcctcctcccatcgcggatccctgtttttcttgatcaccttcgttttcttctcgtttcct 1317 Query: 419 ttaaagattatctttgcatatgggtttgtgtgatgcttcccttcaagatcttgagcttcg 478 || || ||||| ||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1316 ttgaaaattattcttgcatatgggttagtgtgatgcttgccttcaagatcttgagcttca 1257 Query: 479 tgaacaacaacaaaaagcagcccgcctccagctggagta 517 |||||||||||| |||||||||| || |||||||||||| Sbjct: 1256 tgaacaacaacataaagcagcccaccaccagctggagta 1218 Score = 147 bits (74), Expect = 5e-32 Identities = 122/138 (88%) Strand = Plus / Minus Query: 136 ctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgagatg 195 |||||||||||||||||||||||||||||||||||| || |||| ||||| |||||||| Sbjct: 1599 ctatgaagttctccactgcaactcgatttgaatctgaccggtttttgagtcgatgagatg 1540 Query: 196 gaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtagcc 255 | || | || ||||||||||| || |||||||||||||| ||| |||||||||||||||| Sbjct: 1539 gtacgtttcattaatccgcttattactgatcacgtctgcgaggtttatatcaatgtagcc 1480 Query: 256 caaggcttccttgccatg 273 || | |||||||||||| Sbjct: 1479 taaagtttccttgccatg 1462 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 560 tctttctccatgtcgtcttccttgaaaggcttatatgtcgcctccaaaataatctgacca 619 |||||||| || ||||||||||||||||| ||||||||| ||||| | |||| |||||| Sbjct: 1178 tctttctctatatcgtcttccttgaaaggtttatatgtcatctccagagtaatttgacca 1119
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 216 bits (109), Expect = 7e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcctttaaagattatctttgcatatgggtttgtgtgatgc 454 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 20912716 acctttgttttcttctcttctcctttgaaaattatctttgcatatgggtttgtgtgatgc 20912775 Query: 455 ttcccttcaagatcttgagcttcgtgaacaacaacaaaaagcagcccgcctccagctgga 514 || |||||||||||||||||||| |||||||||||| ||||||| || || ||||||||| Sbjct: 20912776 tttccttcaagatcttgagcttcatgaacaacaacataaagcagtcctccaccagctgga 20912835 Query: 515 gtattttctggagctttctgtacttcatcgacaccatccacgctttctttctccatgtcg 574 ||| || |||||||||| || |||| || ||| | || |||||||||||| || Sbjct: 20912836 gtaccatcaggagctttctccaccacatcagcattatcgatgccttctttctccatatcc 20912895 Query: 575 tcttccttgaaaggcttatatgtcgcctccaaaataatctgacca 619 |||||||||||||||||||||||| |||||| | ||| ||||||| Sbjct: 20912896 tcttccttgaaaggcttatatgtcacctccagagtaagctgacca 20912940 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 136 ctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgagatg 195 |||||||||||||||||||| ||| || |||||||| |||||||| || |||||||| || Sbjct: 20912236 ctatgaagttctccactgcatctctatctgaatctgaccatttttggaatcaatgaggtg 20912295 Query: 196 gaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtagcc 255 | ||||||| || |||||||||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 20912296 gtacttctcattgatccgcttgttgctgatcacatctgcgaggcttatatcaatgtagcc 20912355 Query: 256 caaggcttcct 266 |||| ||||| Sbjct: 20912356 taaggtttcct 20912366 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 280 tcctttctttccagctttgcttaggacttcaacatgcaacttatcatttgtaggtggttc 339 |||||||||| |||||| ||||| ||||||| ||||| ||||||||| ||| ||||| Sbjct: 20912485 tcctttctttgaagctttacttagaacttcaatatgcagtttatcatttacagggggttc 20912544 Query: 340 ctcgcaaacaaactcaaattcatcctcccatcgtggatccctgttcttcttgatcacct 398 |||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| |||| Sbjct: 20912545 ctcgcatacaaactcgaattcgtcctcccaccgtggatccctgtttttcttgattacct 20912603
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 216 bits (109), Expect = 7e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcctttaaagattatctttgcatatgggtttgtgtgatgc 454 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4805 acctttgttttcttctcttctcctttgaaaattatctttgcatatgggtttgtgtgatgc 4864 Query: 455 ttcccttcaagatcttgagcttcgtgaacaacaacaaaaagcagcccgcctccagctgga 514 || |||||||||||||||||||| |||||||||||| ||||||| || || ||||||||| Sbjct: 4865 tttccttcaagatcttgagcttcatgaacaacaacataaagcagtcctccaccagctgga 4924 Query: 515 gtattttctggagctttctgtacttcatcgacaccatccacgctttctttctccatgtcg 574 ||| || |||||||||| || |||| || ||| | || |||||||||||| || Sbjct: 4925 gtaccatcaggagctttctccaccacatcagcattatcgatgccttctttctccatatcc 4984 Query: 575 tcttccttgaaaggcttatatgtcgcctccaaaataatctgacca 619 |||||||||||||||||||||||| |||||| | ||| ||||||| Sbjct: 4985 tcttccttgaaaggcttatatgtcacctccagagtaagctgacca 5029 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 136 ctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgagatg 195 |||||||||||||||||||| ||| || |||||||| |||||||| || |||||||| || Sbjct: 4325 ctatgaagttctccactgcatctctatctgaatctgaccatttttggaatcaatgaggtg 4384 Query: 196 gaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtagcc 255 | ||||||| || |||||||||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 4385 gtacttctcattgatccgcttgttgctgatcacatctgcgaggcttatatcaatgtagcc 4444 Query: 256 caaggcttcct 266 |||| ||||| Sbjct: 4445 taaggtttcct 4455 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 280 tcctttctttccagctttgcttaggacttcaacatgcaacttatcatttgtaggtggttc 339 |||||||||| |||||| ||||| ||||||| ||||| ||||||||| ||| ||||| Sbjct: 4574 tcctttctttgaagctttacttagaacttcaatatgcagtttatcatttacagggggttc 4633 Query: 340 ctcgcaaacaaactcaaattcatcctcccatcgtggatccctgttcttcttgatcacct 398 |||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| |||| Sbjct: 4634 ctcgcatacaaactcgaattcgtcctcccaccgtggatccctgtttttcttgattacct 4692
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 216 bits (109), Expect = 7e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcctttaaagattatctttgcatatgggtttgtgtgatgc 454 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 104942 acctttgttttcttctcttctcctttgaaaattatctttgcatatgggtttgtgtgatgc 105001 Query: 455 ttcccttcaagatcttgagcttcgtgaacaacaacaaaaagcagcccgcctccagctgga 514 || |||||||||||||||||||| |||||||||||| ||||||| || || ||||||||| Sbjct: 105002 tttccttcaagatcttgagcttcatgaacaacaacataaagcagtcctccaccagctgga 105061 Query: 515 gtattttctggagctttctgtacttcatcgacaccatccacgctttctttctccatgtcg 574 ||| || |||||||||| || |||| || ||| | || |||||||||||| || Sbjct: 105062 gtaccatcaggagctttctccaccacatcagcattatcgatgccttctttctccatatcc 105121 Query: 575 tcttccttgaaaggcttatatgtcgcctccaaaataatctgacca 619 |||||||||||||||||||||||| |||||| | ||| ||||||| Sbjct: 105122 tcttccttgaaaggcttatatgtcacctccagagtaagctgacca 105166 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 136 ctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgagatg 195 |||||||||||||||||||| ||| || |||||||| |||||||| || |||||||| || Sbjct: 104462 ctatgaagttctccactgcatctctatctgaatctgaccatttttggaatcaatgaggtg 104521 Query: 196 gaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtagcc 255 | ||||||| || |||||||||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 104522 gtacttctcattgatccgcttgttgctgatcacatctgcgaggcttatatcaatgtagcc 104581 Query: 256 caaggcttcct 266 |||| ||||| Sbjct: 104582 taaggtttcct 104592 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 280 tcctttctttccagctttgcttaggacttcaacatgcaacttatcatttgtaggtggttc 339 |||||||||| |||||| ||||| ||||||| ||||| ||||||||| ||| ||||| Sbjct: 104711 tcctttctttgaagctttacttagaacttcaatatgcagtttatcatttacagggggttc 104770 Query: 340 ctcgcaaacaaactcaaattcatcctcccatcgtggatccctgttcttcttgatcacct 398 |||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| |||| Sbjct: 104771 ctcgcatacaaactcgaattcgtcctcccaccgtggatccctgtttttcttgattacct 104829
>gb|AY111680.1| Zea mays CL11621_2 mRNA sequence Length = 631 Score = 153 bits (77), Expect = 8e-34 Identities = 212/259 (81%) Strand = Plus / Plus Query: 135 tctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgagat 194 |||| |||||||||||||||||||| ||||| ||||| ||| ||||| ||||||| Sbjct: 290 tctaggaagttctccactgcaactcaatttggatctgaccannnnnngagtctatgagat 349 Query: 195 ggaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtagc 254 || ||||||| ||||| | |||||| |||||||||||||| ||| | | ||||||| ||| Sbjct: 350 gggacttctcattaattctcttgttactgatcacgtctgcaaggttgacatcaatggagc 409 Query: 255 ccaaggcttccttgccatgcaatattcctttctttccagctttgcttaggacttcaacat 314 |||| | ||||||||||| | | |||||||| ||||| |||||||||||||||| Sbjct: 410 ccaaagtttccttgccatatatcagccctttcttcggggctttacttaggacttcaacat 469 Query: 315 gcaacttatcatttgtaggtggttcctcgcaaacaaactcaaattcatcctcccatcgtg 374 | | ||||||||| ||| || ||||| || |||||||| ||| ||||||||||||| | Sbjct: 470 ggagtttatcatttacaggaggctcctcacacacaaactcgaatccatcctcccatcggg 529 Query: 375 gatccctgttcttcttgat 393 ||||||| ||||||||||| Sbjct: 530 gatccctattcttcttgat 548
>ref|NM_191102.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 145 bits (73), Expect = 2e-31 Identities = 169/201 (84%) Strand = Plus / Minus Query: 301 taggacttcaacatgcaacttatcatttgtaggtggttcctcgcaaacaaactcaaattc 360 ||||||||||||||| | ||||||||||| ||| | |||||| || ||||||||||||| Sbjct: 1272 taggacttcaacatgtagcttatcatttgcaggggtttcctcacactcaaactcaaattc 1213 Query: 361 atcctcccatcgtggatccctgttcttcttgatcacctttgttttcttctcttctccttt 420 |||| ||||||||||| |||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 1212 ttccttccatcgtggattcctgttctctttgaccacctttgttttcttctctactccttt 1153 Query: 421 aaagattatctttgcatatgggtttgtgtgatgcttcccttcaagatcttgagcttcgtg 480 || ||| ||| ||||||| || |||| | || |||||||| |||| |||||| || Sbjct: 1152 gaaagttagttttacatatggattcgtgttacattttccttcaagttctttagcttcatg 1093 Query: 481 aacaacaacaaaaagcagccc 501 |||||||||| |||||||||| Sbjct: 1092 aacaacaacataaagcagccc 1072 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 576 cttccttgaaaggcttatatgtc 598 ||||||||||||||||||||||| Sbjct: 1045 cttccttgaaaggcttatatgtc 1023
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 141 bits (71), Expect = 3e-30 Identities = 110/123 (89%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcctttaaagattatctttgcatatgggtttgtgtgatgc 454 ||||| ||||||||||| | |||||| || ||||| ||||||||||||| ||||||||| Sbjct: 34901938 accttcgttttcttctcgtttcctttgaaaattattcttgcatatgggttagtgtgatgc 34901997 Query: 455 ttcccttcaagatcttgagcttcgtgaacaacaacaaaaagcagcccgcctccagctgga 514 || |||||||||||||||||||| |||||||||||| |||||||||| || ||||||||| Sbjct: 34901998 ttgccttcaagatcttgagcttcatgaacaacaacataaagcagcccaccaccagctgga 34902057 Query: 515 gta 517 ||| Sbjct: 34902058 gta 34902060 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Plus Query: 134 ttctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgaga 193 |||||||||||||||||||||||||||||||||||||| || |||| ||||| |||||| Sbjct: 34901336 ttctatgaagttctccactgcaactcgatttgaatctgaccggtttttgagtcgatgaga 34901395 Query: 194 tggaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtag 253 ||| || | || ||||||||||| || |||||||||||||| ||| |||||||||||||| Sbjct: 34901396 tggtacgtttcattaatccgcttattactgatcacgtctgcgaggtttatatcaatgtag 34901455 Query: 254 cc 255 || Sbjct: 34901456 cc 34901457 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 299 cttaggacttcaacatgcaacttatcatttgtaggtggttcctcgcaaacaaactcaaat 358 ||||||||||||||||| | || ||||||| ||| || ||||| ||||||||||||| Sbjct: 34901741 cttaggacttcaacatgtagtttgtcatttgcagggggatcctcacaaacaaactcaatc 34901800 Query: 359 tcatcctcccatcgtggatccctgttcttcttgatcacct 398 || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 34901801 tcctcctcccatcgcggatccctgtttttcttgatcacct 34901840 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 301 taggacttcaacatgcaacttatcatttgtaggtggttcctcgcaaacaaactcaaattc 360 ||||||||||||||| | ||||||||||| ||| | |||||| || ||||||||||||| Sbjct: 34896369 taggacttcaacatgtagcttatcatttgcaggggtttcctcacactcaaactcaaattc 34896428 Query: 361 atcctcccatcgtggatccctgttct 386 |||| ||||||||||| |||||||| Sbjct: 34896429 ttccttccatcgtggattcctgttct 34896454 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcctttaaagattatctttgcatatgggtttgtgtgatgc 454 |||||||||||||||||| ||||||| || ||| ||| ||||||| || |||| | Sbjct: 34896577 acctttgttttcttctctactcctttgaaagttagttttacatatggattcgtgttacat 34896636 Query: 455 ttcccttcaagatcttgagcttcgtgaacaacaacaaaaagcagccc 501 || |||||||| |||| |||||| |||||||||||| |||||||||| Sbjct: 34896637 tttccttcaagttctttagcttcatgaacaacaacataaagcagccc 34896683 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 560 tctttctccatgtcgtcttccttgaaaggcttatatgtcgcctccaaaataatctgacca 619 |||||||| || ||||||||||||||||| ||||||||| ||||| | |||| |||||| Sbjct: 34902100 tctttctctatatcgtcttccttgaaaggtttatatgtcatctccagagtaatttgacca 34902159 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 576 cttccttgaaaggcttatatgtc 598 ||||||||||||||||||||||| Sbjct: 34896710 cttccttgaaaggcttatatgtc 34896732
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 141 bits (71), Expect = 3e-30 Identities = 110/123 (89%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcctttaaagattatctttgcatatgggtttgtgtgatgc 454 ||||| ||||||||||| | |||||| || ||||| ||||||||||||| ||||||||| Sbjct: 31302 accttcgttttcttctcgtttcctttgaaaattattcttgcatatgggttagtgtgatgc 31361 Query: 455 ttcccttcaagatcttgagcttcgtgaacaacaacaaaaagcagcccgcctccagctgga 514 || |||||||||||||||||||| |||||||||||| |||||||||| || ||||||||| Sbjct: 31362 ttgccttcaagatcttgagcttcatgaacaacaacataaagcagcccaccaccagctgga 31421 Query: 515 gta 517 ||| Sbjct: 31422 gta 31424 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Plus Query: 134 ttctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgaga 193 |||||||||||||||||||||||||||||||||||||| || |||| ||||| |||||| Sbjct: 30700 ttctatgaagttctccactgcaactcgatttgaatctgaccggtttttgagtcgatgaga 30759 Query: 194 tggaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtag 253 ||| || | || ||||||||||| || |||||||||||||| ||| |||||||||||||| Sbjct: 30760 tggtacgtttcattaatccgcttattactgatcacgtctgcgaggtttatatcaatgtag 30819 Query: 254 cc 255 || Sbjct: 30820 cc 30821 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 299 cttaggacttcaacatgcaacttatcatttgtaggtggttcctcgcaaacaaactcaaat 358 ||||||||||||||||| | || ||||||| ||| || ||||| ||||||||||||| Sbjct: 31105 cttaggacttcaacatgtagtttgtcatttgcagggggatcctcacaaacaaactcaatc 31164 Query: 359 tcatcctcccatcgtggatccctgttcttcttgatcacct 398 || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 31165 tcctcctcccatcgcggatccctgtttttcttgatcacct 31204 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 301 taggacttcaacatgcaacttatcatttgtaggtggttcctcgcaaacaaactcaaattc 360 ||||||||||||||| | ||||||||||| ||| | |||||| || ||||||||||||| Sbjct: 25733 taggacttcaacatgtagcttatcatttgcaggggtttcctcacactcaaactcaaattc 25792 Query: 361 atcctcccatcgtggatccctgttct 386 |||| ||||||||||| |||||||| Sbjct: 25793 ttccttccatcgtggattcctgttct 25818 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcctttaaagattatctttgcatatgggtttgtgtgatgc 454 |||||||||||||||||| ||||||| || ||| ||| ||||||| || |||| | Sbjct: 25941 acctttgttttcttctctactcctttgaaagttagttttacatatggattcgtgttacat 26000 Query: 455 ttcccttcaagatcttgagcttcgtgaacaacaacaaaaagcagccc 501 || |||||||| |||| |||||| |||||||||||| |||||||||| Sbjct: 26001 tttccttcaagttctttagcttcatgaacaacaacataaagcagccc 26047 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 560 tctttctccatgtcgtcttccttgaaaggcttatatgtcgcctccaaaataatctgacca 619 |||||||| || ||||||||||||||||| ||||||||| ||||| | |||| |||||| Sbjct: 31464 tctttctctatatcgtcttccttgaaaggtttatatgtcatctccagagtaatttgacca 31523 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 576 cttccttgaaaggcttatatgtc 598 ||||||||||||||||||||||| Sbjct: 26074 cttccttgaaaggcttatatgtc 26096
>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454H12 Length = 161004 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Plus Query: 134 ttctatgaagttctccactgcaactcgatttgaatctgcccatttttagagtcaatgaga 193 |||||||||||||||||||||||||||||||||||||| || |||| ||||| |||||| Sbjct: 160508 ttctatgaagttctccactgcaactcgatttgaatctgaccggtttttgagtcgatgaga 160567 Query: 194 tggaacttctcgttaatccgcttgttgctgatcacgtctgccagggttatatcaatgtag 253 ||| || | || ||||||||||| || |||||||||||||| ||| |||||||||||||| Sbjct: 160568 tggtacgtttcattaatccgcttattactgatcacgtctgcgaggtttatatcaatgtag 160627 Query: 254 cc 255 || Sbjct: 160628 cc 160629 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 301 taggacttcaacatgcaacttatcatttgtaggtggttcctcgcaaacaaactcaaattc 360 ||||||||||||||| | ||||||||||| ||| | |||||| || ||||||||||||| Sbjct: 155541 taggacttcaacatgtagcttatcatttgcaggggtttcctcacactcaaactcaaattc 155600 Query: 361 atcctcccatcgtggatccctgttct 386 |||| ||||||||||| |||||||| Sbjct: 155601 ttccttccatcgtggattcctgttct 155626 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 299 cttaggacttcaacatgcaacttatcatttgtaggtggttcctcgcaaacaaactcaaat 358 ||||||||||||||||| | || ||||||| ||| || ||||| ||||||||||||| Sbjct: 160913 cttaggacttcaacatgtagtttgtcatttgcagggggatcctcacaaacaaactcaatc 160972 Query: 359 tcatcctcccatcgtggatccctgttcttctt 390 || ||||||||||| ||||||||||| ||||| Sbjct: 160973 tcctcctcccatcgcggatccctgtttttctt 161004 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcctttaaagattatctttgcatatgggtttgtgtgatgc 454 |||||||||||||||||| ||||||| || ||| ||| ||||||| || |||| | Sbjct: 155749 acctttgttttcttctctactcctttgaaagttagttttacatatggattcgtgttacat 155808 Query: 455 ttcccttcaagatcttgagcttcgtgaacaacaacaaaaagcagccc 501 || |||||||| |||| |||||| |||||||||||| |||||||||| Sbjct: 155809 tttccttcaagttctttagcttcatgaacaacaacataaagcagccc 155855 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 576 cttccttgaaaggcttatatgtc 598 ||||||||||||||||||||||| Sbjct: 155882 cttccttgaaaggcttatatgtc 155904
>dbj|AK068206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148O13, full insert sequence Length = 1362 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 559 ttctttctccatgtcgtcttccttgaaaggcttatatgtcgcctccaaaataatctgacc 618 |||||||||||| || |||||||||||||||||||||||| |||||| | ||| |||||| Sbjct: 1337 ttctttctccatatcctcttccttgaaaggcttatatgtcacctccagagtaagctgacc 1278 Query: 619 a 619 | Sbjct: 1277 a 1277
>gb|BT013766.1| Lycopersicon esculentum clone 132649F, mRNA sequence Length = 1887 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Minus Query: 365 tcccatcgtggatccctgttcttcttgatcacctttgttttcttctcttctcctttaaag 424 ||||||| |||||||||||||||||||| ||| ||||| |||| |||||||| || Sbjct: 1454 tcccatcttggatccctgttcttcttgacttgcttagtttttctctcctctcctttgaaa 1395 Query: 425 attatctttgcatatgggtttgtgtgatgcttcccttcaagatcttgagcttcgtgaaca 484 | ||||| ||||||| || || || ||||| ||||||| ||||||||||||||| ||| Sbjct: 1394 agaatcttgacatatggattagtatggtgctttccttcaacatcttgagcttcgtggaca 1335 Query: 485 a 485 | Sbjct: 1334 a 1334
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 320 ttatcatttgtaggtggttcctcgcaaacaaactcaaattcatcctcccatcgtggatc 378 ||||||||| | |||||||||||||| ||||||| |||||| | |||||| |||||||| Sbjct: 14631171 ttatcatttatgggtggttcctcgcagacaaactgaaattcttgctcccaacgtggatc 14631229 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 cttccttgaaaggcttatatgt 597 |||||||||||||||||||||| Sbjct: 14631562 cttccttgaaaggcttatatgt 14631583
>dbj|AP004855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1538_H05 Length = 132282 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 320 ttatcatttgtaggtggttcctcgcaaacaaactcaaattcatcctcccatcgtggatc 378 ||||||||| | |||||||||||||| ||||||| |||||| | |||||| |||||||| Sbjct: 21969 ttatcatttatgggtggttcctcgcagacaaactgaaattcttgctcccaacgtggatc 22027 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 cttccttgaaaggcttatatgt 597 |||||||||||||||||||||| Sbjct: 22360 cttccttgaaaggcttatatgt 22381
>dbj|AK064509.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-E04, full insert sequence Length = 1942 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 320 ttatcatttgtaggtggttcctcgcaaacaaactcaaattcatcctcccatcgtggatc 378 ||||||||| | |||||||||||||| ||||||| |||||| | |||||| |||||||| Sbjct: 1548 ttatcatttatgggtggttcctcgcagacaaactgaaattcttgctcccaacgtggatc 1490 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 576 cttccttgaaaggcttatatgt 597 |||||||||||||||||||||| Sbjct: 1292 cttccttgaaaggcttatatgt 1271
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 143 gttctccactgcaactcgatttgaatctgcccatttttagagtcaatgagatggaacttc 202 ||||||||||| | ||| |||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 33355 gttctccactgaagctcaatttgaatctttccatttttggagtcaataagatgatacttc 33296 Query: 203 tc 204 || Sbjct: 33295 tc 33294
>gb|AC084665.1|CBRG47C16 Caenorhabditis briggsae cosmid G47C16, complete sequence Length = 35051 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 510 ctggagtattttctggagctttctg 534 ||||||||||||||||||||||||| Sbjct: 1575 ctggagtattttctggagctttctg 1551
>gb|AC121235.20| Medicago truncatula clone mth2-21k24, complete sequence Length = 116205 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 446 gtgtgatgcttcccttcaagatcttgagcttc 477 |||||||||||||| |||| |||||||||||| Sbjct: 89334 gtgtgatgcttcccctcaacatcttgagcttc 89303
>gb|AC099065.2| Homo sapiens chromosome 1 clone RP11-105I12, complete sequence Length = 181253 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 cacctttgttttcttctcttct 415 |||||||||||||||||||||| Sbjct: 177586 cacctttgttttcttctcttct 177607
>gb|AC096542.2| Homo sapiens chromosome 1 clone RP11-332L18, complete sequence Length = 189411 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 cacctttgttttcttctcttct 415 |||||||||||||||||||||| Sbjct: 66113 cacctttgttttcttctcttct 66134
>gb|AC160932.3| Mus musculus BAC clone RP24-275L14 from chromosome 12, complete sequence Length = 177886 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 479 tgaacaacaacaaaaagcagcc 500 |||||||||||||||||||||| Sbjct: 78292 tgaacaacaacaaaaagcagcc 78271
>emb|AL772372.4| Mouse DNA sequence from clone RP23-375N21 on chromosome 2, complete sequence Length = 210503 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 394 cacctttgttttcttctcttctcctt 419 ||||||||||| |||||||||||||| Sbjct: 21843 cacctttgtttccttctcttctcctt 21818
>emb|AL663083.5| Mouse DNA sequence from clone RP23-280G3 on chromosome 11 Contains the 3' end of the gene for a novel protein and the 3' end of a novel gene, complete sequence Length = 191191 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttct 415 ||||||||||||||||||||| Sbjct: 188632 acctttgttttcttctcttct 188652
>gb|AC112251.5| Homo sapiens BAC clone RP11-734I18 from 4, complete sequence Length = 112537 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 gttttcttctcttctccttta 421 ||||||||||||||||||||| Sbjct: 15114 gttttcttctcttctccttta 15134
>gb|AC073563.3| Mus musculus strain C57BL/6J chromosome 12 clone RP23-24I12, complete sequence Length = 205468 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 atcacctttgttttcttctct 412 ||||||||||||||||||||| Sbjct: 3858 atcacctttgttttcttctct 3838
>gb|AC073589.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-147E23, complete sequence Length = 222430 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 atcacctttgttttcttctct 412 ||||||||||||||||||||| Sbjct: 135156 atcacctttgttttcttctct 135136
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ggtatttgcaagctgctgctt 72 ||||||||||||||||||||| Sbjct: 709513 ggtatttgcaagctgctgctt 709493
>gb|AC008174.2| Homo sapiens BAC clone RP11-400O18 from 2, complete sequence Length = 103663 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 tcttctcctttaaagattatctttg 434 |||||| |||||||||||||||||| Sbjct: 34816 tcttctactttaaagattatctttg 34840
>emb|BX682227.3| Mouse DNA sequence from clone RP23-190N2 on chromosome X, complete sequence Length = 76641 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 tgttttcttctcttctccttt 420 ||||||||||||||||||||| Sbjct: 28017 tgttttcttctcttctccttt 27997
>emb|AL929219.16| Mouse DNA sequence from clone RP23-53I18 on chromosome 2, complete sequence Length = 164107 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ttacaggtatttgcaagctgc 67 ||||||||||||||||||||| Sbjct: 134828 ttacaggtatttgcaagctgc 134848
>emb|BX255885.5| Zebrafish DNA sequence from clone CH211-213M12 in linkage group 4, complete sequence Length = 134701 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 cctttgttttcttctcttctccttt 420 ||||| ||||||||||||||||||| Sbjct: 115329 cctttcttttcttctcttctccttt 115305
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 atcacctttgttttcttctct 412 ||||||||||||||||||||| Sbjct: 1917085 atcacctttgttttcttctct 1917065
>gb|AY588356.1| Humulus lupulus clone HlGT15 microsatellite sequence Length = 456 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cctttgttttcttctcttct 415 |||||||||||||||||||| Sbjct: 164 cctttgttttcttctcttct 145
>gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome 7, complete sequence Length = 214959 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcttcttgatcacctttgttttct 407 ||||||||||||||||| |||||| Sbjct: 97515 tcttcttgatcacctttattttct 97492
>gb|AC139293.4| Mus musculus BAC clone RP24-381N4 from chromosome 8, complete sequence Length = 161248 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 cttctcttctcctttaaaga 425 |||||||||||||||||||| Sbjct: 53256 cttctcttctcctttaaaga 53275
>gb|AC161510.10| Mus musculus chromosome 5, clone RP23-7M16, complete sequence Length = 195579 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctctctgtaccttgtgatgc 105 |||||||||||||||||||| Sbjct: 140062 ctctctgtaccttgtgatgc 140043
>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence Length = 200423 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ttacaggtatttgcaagctgctgc 70 ||||||||||||| |||||||||| Sbjct: 124443 ttacaggtatttgtaagctgctgc 124420
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atcacctttgttttcttctc 411 |||||||||||||||||||| Sbjct: 519891 atcacctttgttttcttctc 519872
>gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H13, complete sequence Length = 152941 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atcacctttgttttcttctc 411 |||||||||||||||||||| Sbjct: 136442 atcacctttgttttcttctc 136423
>gb|AC161268.5| Mus musculus BAC clone RP23-198F11 from chromosome 16, complete sequence Length = 212995 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 atattcctttctttccagct 295 |||||||||||||||||||| Sbjct: 40525 atattcctttctttccagct 40506
>gb|AC154278.2| Mus musculus BAC clone RP24-269E24 from chromosome 16, complete sequence Length = 153579 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 acctttgttttcttctcttctcct 418 |||||| ||||||||||||||||| Sbjct: 74516 acctttattttcttctcttctcct 74493
>ref|XM_955207.1| Neurospora crassa OR74A hypothetical protein (NCU07117.1) partial mRNA Length = 1563 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ttcatcgacaccatccacgc 557 |||||||||||||||||||| Sbjct: 910 ttcatcgacaccatccacgc 929
>ref|XM_327402.1| Neurospora crassa OR74A hypothetical protein (NCU07117.1) partial mRNA Length = 1563 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ttcatcgacaccatccacgc 557 |||||||||||||||||||| Sbjct: 910 ttcatcgacaccatccacgc 929
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ttcccttcaagatcttgagc 474 |||||||||||||||||||| Sbjct: 15027481 ttcccttcaagatcttgagc 15027500
>ref|XM_914061.2| PREDICTED: Mus musculus hypothetical LOC638146 (LOC638146), mRNA Length = 3906 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 gtcttccttgaaaggcttat 593 |||||||||||||||||||| Sbjct: 1247 gtcttccttgaaaggcttat 1266
>gb|AC153865.3| Mus musculus BAC RP23-373P9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180703 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 aaagattatctttgcatatg 440 |||||||||||||||||||| Sbjct: 50402 aaagattatctttgcatatg 50421
>gb|AC090330.22| Homo sapiens chromosome 18, clone RP11-813B21, complete sequence Length = 160530 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttcgtgaacaacaacaaaaa 494 |||||||||||||||||||| Sbjct: 41886 ttcgtgaacaacaacaaaaa 41867
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 ttcccttcaagatcttgagc 474 |||||||||||||||||||| Sbjct: 15281 ttcccttcaagatcttgagc 15262
>ref|XM_975480.1| PREDICTED: Mus musculus hypothetical protein LOC674119 (LOC674119), mRNA Length = 3492 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 gtcttccttgaaaggcttat 593 |||||||||||||||||||| Sbjct: 1244 gtcttccttgaaaggcttat 1263
>ref|XM_975438.1| PREDICTED: Mus musculus hypothetical protein LOC674117 (LOC674117), mRNA Length = 4478 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 gtcttccttgaaaggcttat 593 |||||||||||||||||||| Sbjct: 1244 gtcttccttgaaaggcttat 1263
>gb|AC129539.11| Mus musculus chromosome 16, clone RP23-246B24, complete sequence Length = 238585 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 atattcctttctttccagct 295 |||||||||||||||||||| Sbjct: 33365 atattcctttctttccagct 33384
>gb|AF545858.1| Mus musculus TDPOZ1 (Tdpoz1) and TDPOZ2 (Tdpoz2) genes, complete cds Length = 124933 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 gtcttccttgaaaggcttat 593 |||||||||||||||||||| Sbjct: 35919 gtcttccttgaaaggcttat 35900
>gb|AC130544.3| Mus musculus BAC clone RP24-209I17 from chromosome 19, complete sequence Length = 166863 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ttgcatatgggtttgtgtga 451 |||||||||||||||||||| Sbjct: 49142 ttgcatatgggtttgtgtga 49161
>ref|XM_448950.1| Candida glabrata CBS138, CAGL0L04048g partial mRNA Length = 1764 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 cagcttctatgaagttctccactg 153 ||||||| |||||||||||||||| Sbjct: 1486 cagcttcaatgaagttctccactg 1463
>gb|AC125207.5| Mus musculus BAC clone RP23-220C16 from 8, complete sequence Length = 189936 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cttccttgaaaggcttatat 595 |||||||||||||||||||| Sbjct: 89098 cttccttgaaaggcttatat 89079
>gb|AC003085.2| Homo sapiens BAC clone CTB-94H21 from 7, complete sequence Length = 124836 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 ttttcttctcttctcctttaaaga 425 |||||||||||||||||| ||||| Sbjct: 22296 ttttcttctcttctccttcaaaga 22273
>gb|AC142286.1| Pan troglodytes BAC clone RP43-169G24 from 7, complete sequence Length = 194546 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 ttttcttctcttctcctttaaaga 425 |||||||||||||||||| ||||| Sbjct: 116572 ttttcttctcttctccttcaaaga 116595
>emb|AL731577.7| Human DNA sequence from clone RP11-298J20 on chromosome 10 Contains three novel genes, the 5' end of the ZRANB1 gene for zinc finger RAN-binding domain containing 1 and a CpG island, complete sequence Length = 91516 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 aacaacaacaaaaagcagcc 500 |||||||||||||||||||| Sbjct: 51060 aacaacaacaaaaagcagcc 51041
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 caaggcttccttgccatgca 275 |||||||||||||||||||| Sbjct: 339850 caaggcttccttgccatgca 339869
>gb|AC134043.1| Homo sapiens chromosome 5 clone RP11-175K6, complete sequence Length = 154098 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 cctttgttttcttctcttctcctt 419 ||||| |||||||||||||||||| Sbjct: 133642 cctttattttcttctcttctcctt 133665
>gb|AC166100.2| Mus musculus BAC clone RP24-64H18 from chromosome 19, complete sequence Length = 275852 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ttgcatatgggtttgtgtga 451 |||||||||||||||||||| Sbjct: 21259 ttgcatatgggtttgtgtga 21278
>emb|CR293508.9| Zebrafish DNA sequence from clone CH211-13K20 in linkage group 15, complete sequence Length = 168933 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 aatgagatggaacttctcgttaat 210 ||||| |||||||||||||||||| Sbjct: 140056 aatgacatggaacttctcgttaat 140033
>ref|XM_778978.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC578832 (LOC578832), mRNA Length = 939 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 atattcctttctttccagct 295 |||||||||||||||||||| Sbjct: 225 atattcctttctttccagct 206
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 cagcttctatgaagttctccactg 153 ||||||| |||||||||||||||| Sbjct: 475895 cagcttcaatgaagttctccactg 475872
>gb|AC165262.2| Mus musculus BAC clone RP23-89H5 from chromosome 14, complete sequence Length = 201412 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 cctttgttttcttctcttctcctt 419 ||||| |||||||||||||||||| Sbjct: 11237 cctttcttttcttctcttctcctt 11260
>emb|BX950874.9| Zebrafish DNA sequence from clone CH211-128I1, complete sequence Length = 177114 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttcgtgaacaacaacaaaaa 494 |||||||||||||||||||| Sbjct: 110350 ttcgtgaacaacaacaaaaa 110331
>gb|AC106726.3| Homo sapiens 3 BAC RP11-450I19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 200359 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 ctttgttttcttctcttctccttt 420 |||| ||||||||||||||||||| Sbjct: 15883 ctttcttttcttctcttctccttt 15906
>ref|NM_019044.3| Homo sapiens coiled-coil domain containing 93 (CCDC93), mRNA Length = 6794 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tatttgcaagctgctgcttc 73 |||||||||||||||||||| Sbjct: 3559 tatttgcaagctgctgcttc 3540
>gb|AC090465.15| Homo sapiens chromosome 18, clone RP11-527C6, complete sequence Length = 174535 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttcgtgaacaacaacaaaaa 494 |||||||||||||||||||| Sbjct: 160655 ttcgtgaacaacaacaaaaa 160636
>gb|AE005850.1| Caulobacter crescentus CB15 section 176 of 359 of the complete genome Length = 11211 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ccagctggagtattttctgg 525 |||||||||||||||||||| Sbjct: 1846 ccagctggagtattttctgg 1827
>gb|AC025895.9| Homo sapiens, clone RP11-610C20, complete sequence Length = 179113 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ccaaggcttccttgccatgc 274 |||||||||||||||||||| Sbjct: 43432 ccaaggcttccttgccatgc 43451
>gb|AC009652.14| Homo sapiens chromosome 11, clone RP11-428C19, complete sequence Length = 200823 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 gttttcttctcttctccttt 420 |||||||||||||||||||| Sbjct: 61621 gttttcttctcttctccttt 61602
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 ttcccttcaagatcttgagc 474 |||||||||||||||||||| Sbjct: 127292 ttcccttcaagatcttgagc 127273
>gb|DP000053.1| Oryctolagus cuniculus target 126 genomic scaffold Length = 470930 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 cctttgttttcttctcttctcctt 419 ||||| |||||||||||||||||| Sbjct: 149777 ccttttttttcttctcttctcctt 149754
>emb|BX323460.10| Zebrafish DNA sequence from clone DKEYP-47G11 in linkage group 3, complete sequence Length = 202017 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 ttgatcacctttgttttctt 408 |||||||||||||||||||| Sbjct: 44657 ttgatcacctttgttttctt 44676
>gb|AC159232.2| Mus musculus BAC clone RP24-392E16 from chromosome 13, complete sequence Length = 169281 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 aacaacaacaaaaagcagcc 500 |||||||||||||||||||| Sbjct: 149686 aacaacaacaaaaagcagcc 149667
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gttttcttctcttctccttt 420 |||||||||||||||||||| Sbjct: 2565778 gttttcttctcttctccttt 2565797
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcct 418 |||||||||||||| ||||||||| Sbjct: 22372277 acctttgttttcttttcttctcct 22372300
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ttcccttcaagatcttgagc 474 |||||||||||||||||||| Sbjct: 15022015 ttcccttcaagatcttgagc 15022034
>dbj|AB209993.1| Homo sapiens mRNA for FLJ10996 variant protein, partial cds, clone: bg00176 Length = 6744 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tatttgcaagctgctgcttc 73 |||||||||||||||||||| Sbjct: 3520 tatttgcaagctgctgcttc 3501
>gb|AC112715.4| Homo sapiens BAC clone RP11-370L10 from 2, complete sequence Length = 99901 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ccaaggcttccttgccatgc 274 |||||||||||||||||||| Sbjct: 70108 ccaaggcttccttgccatgc 70127
>gb|AC136926.4| Rattus Norvegicus Strain CH230-163A18 BAC, BN/SsNHsd/MCW, complete sequence Length = 214942 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 481 aacaacaacaaaaagcagcccgcc 504 ||||||||||||||||| |||||| Sbjct: 3404 aacaacaacaaaaagcaccccgcc 3381
>gb|AC006476.3|AC006476 Homo sapiens PAC clone RP4-764O12 from 7, complete sequence Length = 112804 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tttgttttcttctcttctcc 417 |||||||||||||||||||| Sbjct: 14405 tttgttttcttctcttctcc 14386
>gb|AC015600.8| Homo sapiens chromosome 11, clone RP11-45C5, complete sequence Length = 154158 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 tgggtttgtgtgatgcttcc 458 |||||||||||||||||||| Sbjct: 85453 tgggtttgtgtgatgcttcc 85434
>gb|AC009404.5| Homo sapiens BAC clone RP11-28H22 from 2, complete sequence Length = 112883 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tatttgcaagctgctgcttc 73 |||||||||||||||||||| Sbjct: 101179 tatttgcaagctgctgcttc 101198
>gb|AF152410.1|AF152410 Lactococcus lactis bacteriophage eb1 major capsid protein gene, complete cds Length = 1486 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 ttcttgatcacctttgttttcttctctt 413 |||||| || |||||||||||||||||| Sbjct: 411 ttcttgttctcctttgttttcttctctt 384
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcct 418 |||||||||||||| ||||||||| Sbjct: 177523 acctttgttttcttttcttctcct 177546
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcct 418 |||||||||||||| ||||||||| Sbjct: 33344 acctttgttttcttttcttctcct 33367
>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0571B09 Length = 147382 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gttttcttctcttctccttt 420 |||||||||||||||||||| Sbjct: 80135 gttttcttctcttctccttt 80154
>dbj|BS000021.1| Pan troglodytes chromosome 22 clone:PTB-141K15, map 22, complete sequences Length = 183533 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tgggtttgtgtgatgcttcc 458 |||||||||||||||||||| Sbjct: 16454 tgggtttgtgtgatgcttcc 16473
>dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665F09 Length = 147102 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gttttcttctcttctccttt 420 |||||||||||||||||||| Sbjct: 127407 gttttcttctcttctccttt 127426
>emb|AL831774.17| Mouse DNA sequence from clone RP23-301P13 on chromosome 4, complete sequence Length = 163802 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ctttgttttcttctcttctc 416 |||||||||||||||||||| Sbjct: 6083 ctttgttttcttctcttctc 6102
>dbj|AK107106.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-122-A11, full insert sequence Length = 1788 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ttcccttcaagatcttgagc 474 |||||||||||||||||||| Sbjct: 185 ttcccttcaagatcttgagc 204
>emb|AL163210.2|HS21C010 Homo sapiens chromosome 21 segment HS21C010 Length = 340000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tgggtttgtgtgatgcttcc 458 |||||||||||||||||||| Sbjct: 85733 tgggtttgtgtgatgcttcc 85752
>gb|AC153947.3| Mus musculus 10 BAC RP24-408C20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209414 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tcctttaaagattatctttg 434 |||||||||||||||||||| Sbjct: 90585 tcctttaaagattatctttg 90566
>emb|CT025522.17| Mouse DNA sequence from clone RP23-332L23 on chromosome 16, complete sequence Length = 199628 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acctttgttttcttctcttctcct 418 |||||| ||||||||||||||||| Sbjct: 103637 acctttattttcttctcttctcct 103660
>gb|AC171678.8| Mus musculus chromosome 8, clone RP24-104E12, complete sequence Length = 175681 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 cttctcttctcctttaaaga 425 |||||||||||||||||||| Sbjct: 140791 cttctcttctcctttaaaga 140810
>gb|AC133585.11| Mus musculus chromosome 14, clone RP24-456G16, complete sequence Length = 174807 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 cctttgttttcttctcttctcctt 419 ||||| |||||||||||||||||| Sbjct: 165548 cctttcttttcttctcttctcctt 165571
>gb|AC121504.14| Mus musculus chromosome 13, clone RP24-140A15, complete sequence Length = 156791 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 aacaacaacaaaaagcagcc 500 |||||||||||||||||||| Sbjct: 118226 aacaacaacaaaaagcagcc 118245
>emb|AL928740.6| Zebrafish DNA sequence from clone CH211-129O13, complete sequence Length = 177281 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ttgatcacctttgttttctt 408 |||||||||||||||||||| Sbjct: 126114 ttgatcacctttgttttctt 126095
>emb|CT009664.17| Pig DNA sequence from clone CH242-113D8 on chromosome 7, complete sequence Length = 182046 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ggcaccttgctcacagcttc 136 |||||||||||||||||||| Sbjct: 29980 ggcaccttgctcacagcttc 29961
>gb|AF027390.1|AF027390 Homo sapiens 7q telomere, complete sequence Length = 225432 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tttgttttcttctcttctcc 417 |||||||||||||||||||| Sbjct: 39637 tttgttttcttctcttctcc 39618
>gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complete sequence Length = 196912 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcttcttgatcacctttgttttct 407 ||||||||||||||||| |||||| Sbjct: 182158 tcttcttgatcacctttattttct 182181
>gb|AC171638.2| Rhesus Macaque BAC CH250-504D18 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 160646 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tatttgcaagctgctgcttc 73 |||||||||||||||||||| Sbjct: 145060 tatttgcaagctgctgcttc 145041
>gb|L48605.1|C2PVCG Bacteriophage c2 complete genome Length = 22172 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 ttcttgatcacctttgttttcttctctt 413 |||||| || |||||||||||||||||| Sbjct: 9804 ttcttgttctcctttgttttcttctctt 9777
>emb|AJ010597.1|HS73M5 Homo sapiens chromosome 21 PAC RPCIP704M573Q2, complete sequence Length = 105999 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tgggtttgtgtgatgcttcc 458 |||||||||||||||||||| Sbjct: 50348 tgggtttgtgtgatgcttcc 50367
>emb|AL034449.1|HS111K10 Homo sapiens chromosome 21 PAC RPCIP704K10111Q2, complete sequence Length = 145656 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tgggtttgtgtgatgcttcc 458 |||||||||||||||||||| Sbjct: 129803 tgggtttgtgtgatgcttcc 129822
>emb|AL844167.7| Mouse DNA sequence from clone RP23-66F6 on chromosome 2, complete sequence Length = 232834 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tcaaattcatcctcccatcg 372 |||||||||||||||||||| Sbjct: 163204 tcaaattcatcctcccatcg 163185
>gb|AC008640.6| Homo sapiens chromosome 5 clone CTB-17P2, complete sequence Length = 153596 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 cctttgttttcttctcttctcctt 419 ||||| |||||||||||||||||| Sbjct: 140598 cctttattttcttctcttctcctt 140575 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,175,949 Number of Sequences: 3902068 Number of extensions: 8175949 Number of successful extensions: 269582 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 268672 Number of HSP's gapped (non-prelim): 904 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
