| Clone Name | rbags1n09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF457947.1| Zea mays clone cr1n.pk0144.g12, mRNA sequence Length = 592 Score = 93.7 bits (47), Expect = 3e-16 Identities = 88/103 (85%) Strand = Plus / Minus Query: 156 ggcggcagcctcctccagcagctgcttcaccttggtgatgtagtcagccattgcctcctc 215 |||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||| || Sbjct: 298 ggcggcagcctcctcctggagctgcttcaccttggtgatgtagtcattcatcgcctcatc 239 Query: 216 nttntntttggcttcgacggacttccaggcatnccacttggcc 258 || |||| |||| || | ||||||||||| |||||||||| Sbjct: 238 cttcgatttgccttcaacagccttccaggcatcccacttggcc 196
>gb|AY104469.1| Zea mays PCO107996 mRNA sequence Length = 693 Score = 93.7 bits (47), Expect = 3e-16 Identities = 88/103 (85%) Strand = Plus / Minus Query: 156 ggcggcagcctcctccagcagctgcttcaccttggtgatgtagtcagccattgcctcctc 215 |||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||| || Sbjct: 353 ggcggcagcctcctcctggagctgcttcaccttggtgatgtagtcattcatcgcctcatc 294 Query: 216 nttntntttggcttcgacggacttccaggcatnccacttggcc 258 || |||| |||| || | ||||||||||| |||||||||| Sbjct: 293 cttcgatttgccttcaacagccttccaggcatcccacttggcc 251
>ref|XM_550505.1| Oryza sativa (japonica cultivar-group), mRNA Length = 522 Score = 75.8 bits (38), Expect = 7e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 162 agcctcctccagcagctgcttcaccttggtgatgtagtcagccattgcctcctc 215 |||||||||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct: 333 agcctcctccagcagctgcttcaccttggtgatgtaatcggccatagcttcctc 280
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 75.8 bits (38), Expect = 7e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 162 agcctcctccagcagctgcttcaccttggtgatgtagtcagccattgcctcctc 215 |||||||||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct: 860098 agcctcctccagcagctgcttcaccttggtgatgtaatcggccatagcttcctc 860151
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 75.8 bits (38), Expect = 7e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 162 agcctcctccagcagctgcttcaccttggtgatgtagtcagccattgcctcctc 215 |||||||||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct: 143232 agcctcctccagcagctgcttcaccttggtgatgtaatcggccatagcttcctc 143285
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 75.8 bits (38), Expect = 7e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 162 agcctcctccagcagctgcttcaccttggtgatgtagtcagccattgcctcctc 215 |||||||||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct: 40993 agcctcctccagcagctgcttcaccttggtgatgtaatcggccatagcttcctc 41046
>dbj|AK058833.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-B07, full insert sequence Length = 522 Score = 75.8 bits (38), Expect = 7e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 162 agcctcctccagcagctgcttcaccttggtgatgtagtcagccattgcctcctc 215 |||||||||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct: 333 agcctcctccagcagctgcttcaccttggtgatgtaatcggccatagcttcctc 280
>ref|NM_189110.2| Oryza sativa (japonica cultivar-group), mRNA Length = 595 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||||| |||||||||||||||||||||||||| Sbjct: 318 gcagcctcctccaggagctgcttcaccttggtgatgtagtc 278
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||||| |||||||||||||||||||||||||| Sbjct: 3692263 gcagcctcctccaggagctgcttcaccttggtgatgtagtc 3692303
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||||| |||||||||||||||||||||||||| Sbjct: 15760 gcagcctcctccaggagctgcttcaccttggtgatgtagtc 15800
>dbj|AK122061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115J15, full insert sequence Length = 579 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||||| |||||||||||||||||||||||||| Sbjct: 321 gcagcctcctccaggagctgcttcaccttggtgatgtagtc 281
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||||| |||||||||||||||||||||||||| Sbjct: 170769 gcagcctcctccaggagctgcttcaccttggtgatgtagtc 170809
>dbj|AK059406.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C02, full insert sequence Length = 595 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||||| |||||||||||||||||||||||||| Sbjct: 318 gcagcctcctccaggagctgcttcaccttggtgatgtagtc 278
>gb|AY121834.1| Oryza sativa (japonica cultivar-group) acyl-CoA-binding protein (ACBP) mRNA, complete cds Length = 578 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 162 agcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||| |||||||||||||||||||||||||| Sbjct: 295 agcctcctccaggagctgcttcaccttggtgatgtagtc 257
>gb|AF031541.1|AF031541 Fritillaria agrestis acyl-CoA-binding protein (acabp) mRNA, complete cds Length = 529 Score = 69.9 bits (35), Expect = 4e-09 Identities = 82/99 (82%) Strand = Plus / Minus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtcagccattgcctcctcnttn 219 |||| ||| ||||||| |||||||||||||||||||||||| |||| || ||||| || Sbjct: 313 gcagactcttccagcaactgcttcaccttggtgatgtagtctcccatggcttcctccttc 254 Query: 220 tntttggcttcgacggacttccaggcatnccacttggcc 258 ||| ||||||||| |||||| |||| ||| |||||| Sbjct: 253 gatttcccttcgacggccttccaagcatcccatttggcc 215
>ref|XM_463020.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.7 mRNA Length = 468 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||| | || ||||||||||||||||||||||| Sbjct: 260 gcagcctcctcctggagttgcttcaccttggtgatgtagtc 220
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||| | || ||||||||||||||||||||||| Sbjct: 20890532 gcagcctcctcctggagttgcttcaccttggtgatgtagtc 20890572
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||| | || ||||||||||||||||||||||| Sbjct: 20883561 gcagcctcctcctggagttgcttcaccttggtgatgtagtc 20883601
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12 map MAP_LOC, complete sequence Length = 167323 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 |||||||||||| | || ||||||||||||||||||||||| Sbjct: 31980 gcagcctcctcctggagttgcttcaccttggtgatgtagtc 31940
>dbj|AB071376.1| Panax ginseng ACBP mRNA for Acyl-CoA-binding protein, complete cds Length = 453 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtcagccattgcctcctc 215 ||||| || ||||||| |||||||||||| ||||| || ||| ||||||||||||| Sbjct: 286 gcagcttcttccagcaactgcttcaccttagtgatataatcacccattgcctcctc 231
>ref|XM_515759.1| PREDICTED: Pan troglodytes similar to Acyl-CoA-binding protein (ACBP) (Diazepam binding inhibitor) (DBI) (Endozepine) (EP) (LOC459574), mRNA Length = 617 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 317 ttccaggcatcccacttggccttgcccg 290
>gb|DQ150449.1| Cercopithecus cephus diazepam-binding protein (DBI) gene, partial cds Length = 452 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 270 ttccaggcatcccacttggccttgcccg 243
>gb|DQ150448.1| Erythrocebus patas diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcccg 403
>gb|DQ150446.1| Macaca nemestrina diazepam-binding protein (DBI) gene, partial cds Length = 452 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 270 ttccaggcatcccacttggccttgcccg 243
>gb|DQ150445.1| Macaca mulatta diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcccg 403
>gb|DQ150441.1| Pongo pygmaeus diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcccg 403
>gb|DQ150440.1| Gorilla gorilla diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcccg 403
>gb|DQ150439.1| Pan paniscus diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcccg 403
>gb|DQ150438.1| Pan troglodytes diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcccg 403
>gb|BT014613.1| Lycopersicon esculentum clone 134096R, mRNA sequence Length = 521 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Minus Query: 160 gcagcctcctccagcagctgcttcaccttggtgatgtagtc 200 ||||| || ||||||| ||| |||||||||||||||||||| Sbjct: 317 gcagcttcttccagcaactgtttcaccttggtgatgtagtc 277
>emb|AM000001.1| Homo sapiens mRNA for diazepam binding inhibitor, splice form 1c (DBI gene) Length = 598 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 424 ttccaggcatcccacttggccttgcccg 397
>gb|BC006466.1| Homo sapiens diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein), mRNA (cDNA clone IMAGE:3510767) Length = 548 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 222 ttccaggcatcccacttggccttgcccg 195
>emb|CR456956.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0716D for gene DBI, diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein); complete cds, incl. stopcodon Length = 264 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 179 ttccaggcatcccacttggccttgcccg 152
>gb|AC016736.6| Homo sapiens BAC clone RP11-393J17 from 2, complete sequence Length = 149884 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 111979 ttccaggcatcccacttggccttgcccg 111952
>emb|X94564.1|HSDBIEX3 H.sapiens dbi/acbp gene exon 3 Length = 142 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 83 ttccaggcatcccacttggccttgcccg 56
>ref|NM_020548.4| Homo sapiens diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein) (DBI), mRNA Length = 730 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 387 ttccaggcatcccacttggccttgcccg 360
>gb|BC062996.1| Homo sapiens diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein), mRNA (cDNA clone MGC:70414 IMAGE:5168729), complete cds Length = 730 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 387 ttccaggcatcccacttggccttgcccg 360
>gb|M14200.1|HUMDBI Human diazepam binding inhibitor (DBI) mRNA, complete cds Length = 556 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 249 ttccaggcatcccacttggccttgcccg 222
>gb|M15887.1|HUMEDZ Human endozepine (putative ligand of benzodiazepine receptor) mRNA, complete cds Length = 405 Score = 50.1 bits (25), Expect = 0.004 Identities = 27/28 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcccg 265 |||||||||| ||||||||||||||||| Sbjct: 236 ttccaggcatcccacttggccttgcccg 209
>gb|DQ150451.1| Ateles geoffroyi diazepam-binding protein (DBI) gene, partial cds Length = 394 Score = 48.1 bits (24), Expect = 0.015 Identities = 26/27 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgccc 264 |||||||||| |||||||||||||||| Sbjct: 212 ttccaggcatcccacttggccttgccc 186
>gb|DQ150447.1| Papio anubis diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcc 405
>gb|DQ150444.1| Nomascus gabriellae diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcc 405
>gb|DQ150443.1| Hylobates lar diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcc 405
>gb|DQ150442.1| Symphalangus syndactylus diazepam-binding protein (DBI) gene, partial cds Length = 612 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 430 ttccaggcatcccacttggccttgcc 405
>ref|XM_845072.1| PREDICTED: Canis familiaris similar to diazepam binding inhibitor (LOC608150), mRNA Length = 384 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 299 ttccaggcatcccacttggccttgcc 274
>ref|XM_844244.1| PREDICTED: Canis familiaris similar to diazepam binding inhibitor, transcript variant 4 (LOC476115), mRNA Length = 550 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 250 ttccaggcatcccacttggccttgcc 225
>ref|XM_533322.2| PREDICTED: Canis familiaris similar to diazepam binding inhibitor, transcript variant 3 (LOC476115), mRNA Length = 570 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 270 ttccaggcatcccacttggccttgcc 245
>emb|AJ301367.1|SSC301367 Sus scrofa partial mRNA for diazepam binding inhibitor (DBI gene) Length = 257 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 201 ttccaggcatcccacttggccttgcc 176
>gb|AF407578.2|AF407578 Oryctolagus cuniculus acyl CoA binding protein mRNA, complete cds Length = 536 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 226 ttccaggcatcccacttggccttgcc 201
>gb|BC114181.1| Bos taurus cDNA clone MGC:140115 IMAGE:8063639, complete cds Length = 645 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 278 ttccaggcatcccacttggccttgcc 253
>ref|NM_214119.1| Sus scrofa endozepine (DBI), mRNA Length = 514 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 221 ttccaggcatcccacttggccttgcc 196
>gb|M15886.1|BOVEDZ Bovine endozepine (putative ligand of benzodiazepine receptor) mRNA, complete cds Length = 608 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 303 ttccaggcatcccacttggccttgcc 278
>dbj|AB019792.1| Sus scrofa mRNA for endozepine, complete cds Length = 514 Score = 46.1 bits (23), Expect = 0.060 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgcc 263 |||||||||| ||||||||||||||| Sbjct: 221 ttccaggcatcccacttggccttgcc 196
>ref|NM_030865.1| Rattus norvegicus myocilin (Myoc), mRNA Length = 2068 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 ||||||||| ||||||||||||||| Sbjct: 1665 gcctcctcctgcagctgcttcacct 1641
>gb|AY488135.1| Zea mays allene oxide synthase (aos) mRNA, complete cds Length = 1768 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 agcagctgcttcaccttggtg 192 ||||||||||||||||||||| Sbjct: 497 agcagctgcttcaccttggtg 477
>gb|AY207404.1| Lactuca sativa clone 68_201_DIA SNP-based marker Length = 246 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 ttcaccttggtgatgtagtca 201 ||||||||||||||||||||| Sbjct: 134 ttcaccttggtgatgtagtca 114
>gb|AY207403.1| Lactuca sativa clone 29_201_GRN SNP-based marker Length = 246 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 ttcaccttggtgatgtagtca 201 ||||||||||||||||||||| Sbjct: 134 ttcaccttggtgatgtagtca 114
>gb|AC113998.5| Mus musculus BAC clone RP23-137C20 from 13, complete sequence Length = 194221 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 ggcagcctcctccagcagctg 179 ||||||||||||||||||||| Sbjct: 92218 ggcagcctcctccagcagctg 92238
>gb|AC051649.21| Homo sapiens chromosome 11, clone RP11-534I22, complete sequence Length = 188519 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttc 183 ||||||||||||||||||||| Sbjct: 108487 gcctcctccagcagctgcttc 108467
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 gcctcctccagcagctgcttc 183 ||||||||||||||||||||| Sbjct: 7456877 gcctcctccagcagctgcttc 7456897
>ref|NM_167705.1| Drosophila melanogaster CG1695-RB, transcript variant B (CG1695), mRNA Length = 3506 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 |||||||||| |||||||||||||| Sbjct: 70 gcctcctccatcagctgcttcacct 46
>ref|NM_134551.4| Drosophila melanogaster CG32506-RA (CG32506), mRNA Length = 3723 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 |||||||||| |||||||||||||| Sbjct: 344 gcctcctccatcagctgcttcacct 320
>ref|NM_134550.1| Drosophila melanogaster CG1695-RA, transcript variant A (CG1695), mRNA Length = 3281 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 |||||||||| |||||||||||||| Sbjct: 70 gcctcctccatcagctgcttcacct 46
>gb|AC147659.5| Pan troglodytes BAC clone CH251-425E12 from chromosome y, complete sequence Length = 168988 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 gcctcctccagcagctgcttc 183 ||||||||||||||||||||| Sbjct: 35857 gcctcctccagcagctgcttc 35877
>gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR25I22, complete sequence Length = 164942 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 |||||||||| |||||||||||||| Sbjct: 39781 gcctcctccatcagctgcttcacct 39757 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 |||||||||| |||||||||||||| Sbjct: 17976 gcctcctccatcagctgcttcacct 17952
>gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR30J04, complete sequence Length = 177277 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 |||||||||| |||||||||||||| Sbjct: 176676 gcctcctccatcagctgcttcacct 176652 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 |||||||||| |||||||||||||| Sbjct: 154871 gcctcctccatcagctgcttcacct 154847
>gb|AY104188.1| Zea mays PCO060855 mRNA sequence Length = 1768 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 agcagctgcttcaccttggtg 192 ||||||||||||||||||||| Sbjct: 497 agcagctgcttcaccttggtg 477
>gb|AF093567.1|AF093567 Rattus norvegicus myocilin mRNA, complete cds Length = 2068 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 ||||||||| ||||||||||||||| Sbjct: 1665 gcctcctcctgcagctgcttcacct 1641
>dbj|AP006462.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-813O18, complete sequence Length = 98815 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 gcctcctccagcagctgcttc 183 ||||||||||||||||||||| Sbjct: 84099 gcctcctccagcagctgcttc 84119
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete sequence Length = 302538 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 |||||||||| |||||||||||||| Sbjct: 141973 gcctcctccatcagctgcttcacct 141949 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcacct 187 |||||||||| |||||||||||||| Sbjct: 120168 gcctcctccatcagctgcttcacct 120144
>gb|AC168881.3| Mus musculus BAC clone RP23-170A19 from chromosome 13, complete sequence Length = 212206 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ggcagcctcctccagcagctg 179 ||||||||||||||||||||| Sbjct: 46917 ggcagcctcctccagcagctg 46897
>gb|DQ150450.1| Saguinus labiatus diazepam-binding protein (DBI) gene, partial cds Length = 452 Score = 40.1 bits (20), Expect = 3.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgccc 264 ||||| |||| |||||||||||||||| Sbjct: 270 ttccaagcatcccacttggccttgccc 244
>gb|AC115784.9| Mus musculus chromosome 15, clone RP23-170J10, complete sequence Length = 212803 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaatttatttgtgtttattg 86 |||||||||||||||||||| Sbjct: 133074 gaatttatttgtgtttattg 133093
>emb|CR715767.2|CNS0GF8J Tetraodon nigroviridis full-length cDNA Length = 1076 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 gcggcggcagcctcctccagcagc 177 ||||| |||||||||||||||||| Sbjct: 382 gcggcagcagcctcctccagcagc 405
>emb|X77134.1|BNACBP B.napus mRNA for acyl-CoA binding protein Length = 403 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 tgcttcaccttggtgatgtagtca 201 ||||||||||| |||||||||||| Sbjct: 282 tgcttcaccttagtgatgtagtca 259
>gb|AC133198.3| Mus musculus BAC clone RP23-251I6 from chromosome 17, complete sequence Length = 182898 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tatgtctgcaccaccaggcc 111 |||||||||||||||||||| Sbjct: 155915 tatgtctgcaccaccaggcc 155934
>gb|AC010562.5| Drosophila melanogaster 3L BAC RP98-21K18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181528 Score = 40.1 bits (20), Expect = 3.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 238 ttccaggcatnccacttggccttgccc 264 |||||||| | |||||||||||||||| Sbjct: 19323 ttccaggcctcccacttggccttgccc 19349
>gb|AC010115.6| Drosophila melanogaster 3L BAC RP98-16I16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180821 Score = 40.1 bits (20), Expect = 3.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 238 ttccaggcatnccacttggccttgccc 264 |||||||| | |||||||||||||||| Sbjct: 176010 ttccaggcctcccacttggccttgccc 176036
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgcttcaccttgg 190 |||||| |||||||||||||| |||||| Sbjct: 255340 gcctccaccagcagctgcttcgccttgg 255313
>ref|NM_168192.1| Drosophila melanogaster Diazepam-binding inhibitor CG8627-RA, transcript variant A (Dbi), mRNA Length = 416 Score = 40.1 bits (20), Expect = 3.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgccc 264 |||||||| | |||||||||||||||| Sbjct: 234 ttccaggcctcccacttggccttgccc 208
>ref|NM_079228.2| Drosophila melanogaster Diazepam-binding inhibitor CG8627-RB, transcript variant B (Dbi), mRNA Length = 378 Score = 40.1 bits (20), Expect = 3.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgccc 264 |||||||| | |||||||||||||||| Sbjct: 196 ttccaggcctcccacttggccttgccc 170
>gb|AY070704.1| Drosophila melanogaster RH39533 full length cDNA Length = 428 Score = 40.1 bits (20), Expect = 3.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgccc 264 |||||||| | |||||||||||||||| Sbjct: 234 ttccaggcctcccacttggccttgccc 208
>gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, complete sequence Length = 217045 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaatttatttgtgtttattg 86 |||||||||||||||||||| Sbjct: 7041 gaatttatttgtgtttattg 7060
>gb|AC092093.34| Mus musculus strain C57BL/6J chromosome 10 clone rp23-168o8, complete sequence Length = 200124 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cagcctcctccagcagctgc 180 |||||||||||||||||||| Sbjct: 142285 cagcctcctccagcagctgc 142304
>gb|AC020576.2|T12C22 Sequence of BAC T12C22 from Arabidopsis thaliana chromosome 1, complete sequence Length = 115421 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cagctgcttcaccttggtga 193 |||||||||||||||||||| Sbjct: 22787 cagctgcttcaccttggtga 22806
>gb|AE003560.3| Drosophila melanogaster chromosome 3L, section 25 of 83 of the complete sequence Length = 285494 Score = 40.1 bits (20), Expect = 3.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgccc 264 |||||||| | |||||||||||||||| Sbjct: 209406 ttccaggcctcccacttggccttgccc 209380
>gb|AC168063.3| Mus musculus BAC clone RP23-197G3 from chromosome 17, complete sequence Length = 213263 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tatgtctgcaccaccaggcc 111 |||||||||||||||||||| Sbjct: 27079 tatgtctgcaccaccaggcc 27098
>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete sequence Length = 230848 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cagcctcctccagcagctgc 180 |||||||||||||||||||| Sbjct: 50935 cagcctcctccagcagctgc 50954
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcctcctccagcagctgctt 182 |||||||||||||||||||| Sbjct: 838452 gcctcctccagcagctgctt 838433
>gb|U04823.1|DMU04823 Drosophila melanogaster Oregon R diazepam binding inhibitor (DBI) mRNA, complete cds Length = 394 Score = 40.1 bits (20), Expect = 3.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgccc 264 |||||||| | |||||||||||||||| Sbjct: 212 ttccaggcctcccacttggccttgccc 186
>gb|U04822.1|DMU04822 Drosophila melanogaster Oregon R diazepam binding inhibitor (DBI) gene, complete cds Length = 2821 Score = 40.1 bits (20), Expect = 3.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 238 ttccaggcatnccacttggccttgccc 264 |||||||| | |||||||||||||||| Sbjct: 2368 ttccaggcctcccacttggccttgccc 2342 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,030,905 Number of Sequences: 3902068 Number of extensions: 2030905 Number of successful extensions: 52075 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51874 Number of HSP's gapped (non-prelim): 201 length of query: 282 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 260 effective length of database: 17,147,199,772 effective search space: 4458271940720 effective search space used: 4458271940720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)