>REMO_SOLTU (P93788) Remorin (pp34)|
          Length = 198

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 20/53 (37%), Positives = 39/53 (73%)
 Frame = -3

Query: 399 WQEAEKAKYLARFQREEVQIQAWENHQRAKIEAEMKRVEAKMERKRAREHDRL 241
           W+E+EK+K   + Q++   I AWEN ++A +EAE+K++E ++E+K+A   +++
Sbjct: 96  WEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAEYTEKM 148

>TRHY_SHEEP (P22793) Trichohyalin|
          Length = 1549

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -3

Query: 429 EXDREXRAADWQEAEKAKYLARFQREEVQIQAWENHQRAKIEAE---MKRVEAKMERKRA 259
           E  R+ R   ++E E  +   R QREE Q+Q  E  +R + E E   +++VE   E +  
Sbjct: 406 EKRRQERERQYREVELQREEERLQREEEQLQREEREKRRRQEREKQYLEKVELWEEEQLQ 465

Query: 258 RE 253
           RE
Sbjct: 466 RE 467

>CALD1_HUMAN (Q05682) Caldesmon (CDM)|
          Length = 793

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = -3

Query: 441 DKXVEXDREXRAADWQEAEKAKYLARFQREEVQIQAWEN--HQRAKIEAEMKRVEAKMER 268
           +K  E D+E       EAE+A+  A  +RE ++ +  +    +RA+IEAE K    + ER
Sbjct: 255 EKMEEEDKERA-----EAERARLEAE-ERERIKAEQDKKIADERARIEAEEKAAAQERER 308

Query: 267 KRAREHDRL 241
           + A E +R+
Sbjct: 309 REAEERERM 317

>MATK_ALPZE (Q8SKV2) Maturase K (Intron maturase)|
          Length = 515

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 253 LASTLSFHLCLYSLHFSFNFCSLVIFPSLDLYLFPLKPCKILCFL 387
           +   LS HL  + LH  +N+ SL+I P+  +Y+F     ++ CFL
Sbjct: 174 IQDALSLHLLQFLLHEYYNWNSLII-PNKSIYVFSKDNKRLFCFL 217

>MATK_ALPCA (Q8HVA1) Maturase K (Intron maturase)|
          Length = 515

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 253 LASTLSFHLCLYSLHFSFNFCSLVIFPSLDLYLFPLKPCKILCFL 387
           +   LS HL  + LH  +N+ SL+I P+  +Y+F     ++ CFL
Sbjct: 174 IQDALSLHLLQFLLHEYYNWNSLII-PNKSIYVFSKDNKRLFCFL 217

>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface|
           antigen) (721P) (Protein XE7)
          Length = 695

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -3

Query: 420 REXRAADWQEAE--KAKYLARFQREEVQIQAWENHQRAKIEAEMKRVEAKMERKRAREHD 247
           RE  A + Q AE  K K L   +RE  + +     ++ + + E++R + K+E+ +A E  
Sbjct: 291 REKEAEERQRAEERKQKELEELERERKREEKLRKREQKQRDRELRRNQKKLEKLQAEEQK 350

Query: 246 RL 241
           +L
Sbjct: 351 QL 352

>PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediate|
            filament-associated protein) (IFAP300) (Fragment)
          Length = 4473

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
 Frame = -3

Query: 417  EXRAADWQEAEKAKYLARFQREEVQIQAWENHQRAKIEAEMKRVEAKME-----RKRARE 253
            E    + Q     + LAR QRE         H+R ++EAE+ +V A+ME     + RA E
Sbjct: 1647 ETEQGEQQRQLLEEELARLQREATAA----THKRQELEAELAKVRAEMEVLLASKARAEE 1702

Query: 252  HDR 244
              R
Sbjct: 1703 ESR 1705

>RRMJ3_MOUSE (Q9DBE9) Putative rRNA methyltransferase 3 (EC 2.1.1.-) (rRNA|
           (uridine-2'-O-)-methyltransferase 3)
          Length = 838

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 17/71 (23%), Positives = 39/71 (54%)
 Frame = -3

Query: 453 NVXXDKXVEXDREXRAADWQEAEKAKYLARFQREEVQIQAWENHQRAKIEAEMKRVEAKM 274
           ++  ++  E D E   A+ ++A + +     +REE Q+       +A+  AE+KR + K+
Sbjct: 333 SLSSEEEEEGDEEEAVAETKQAPEEEE----EREEEQLNRTLAEMKAQEVAELKRKKKKL 388

Query: 273 ERKRAREHDRL 241
            R++ ++ +R+
Sbjct: 389 LREQRKQRERV 399

>MRGRE_MOUSE (Q91ZB7) Mas-related G-protein coupled receptor member E|
           (Evolutionary breakpoint transcript 3 protein)
          Length = 310

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 226 CHLPSKPVMLASTLSFHLCLYSLHFSFNFCSLVIFPSLDLYLF 354
           C LP     L+  LS+H+ LY  HFSF   S+       +Y F
Sbjct: 225 CGLPFGIFWLSKNLSWHIPLYFYHFSFFMASVHSAAKPAIYFF 267

>GBP4_HUMAN (Q96PP9) Guanylate-binding protein 4|
          Length = 640

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
 Frame = -3

Query: 465 ANXANVXXDKXVEXDREXRAADWQEAEKAKYLARFQREEVQIQAWENHQRAKIEAEMKRV 286
           ++ A    +K +  +R  + A    AEK + L R +++E Q Q  E  +R+  +  + ++
Sbjct: 492 SDKALTAGEKAIAAERAMKEA----AEKEQELLREKQKEQQ-QMMEAQERS-FQENIAQL 545

Query: 285 EAKMERKRA---REHDRL 241
           + KMER+R    REH+RL
Sbjct: 546 KKKMERERENLLREHERL 563

>CALD1_CHICK (P12957) Caldesmon (CDM)|
          Length = 771

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 18/63 (28%), Positives = 34/63 (53%)
 Frame = -3

Query: 441 DKXVEXDREXRAADWQEAEKAKYLARFQREEVQIQAWENHQRAKIEAEMKRVEAKMERKR 262
           ++  + ++E +AA+ +E  KA+   R   E           +A++EAE  + + KME K+
Sbjct: 357 EERAKAEKERKAAEERERAKAEEEKRAAEE-----------KARLEAEKLKEKKKMEEKK 405

Query: 261 ARE 253
           A+E
Sbjct: 406 AQE 408

>T2_MOUSE (Q06666) Octapeptide-repeat protein T2|
          Length = 185

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -3

Query: 429 EXDREXRAADWQEAEKAKYLARFQREEVQIQAWENHQRAKIEAEMKRVEAKMERKRAREH 250
           E +RE      +E ++ +  A  QR   + +  E H+R +     +  E + ER+R RE 
Sbjct: 48  EAEREAERQRGRERQRGRGEAERQRGRERGREVERHRRGREAERQRGREREAERQRGREA 107

Query: 249 DR 244
           +R
Sbjct: 108 ER 109

>MNN4_YEAST (P36044) Protein MNN4|
          Length = 1178

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 14/66 (21%), Positives = 36/66 (54%)
 Frame = -3

Query: 441  DKXVEXDREXRAADWQEAEKAKYLARFQREEVQIQAWENHQRAKIEAEMKRVEAKMERKR 262
            +K  + + E +  + +E +K +   + ++EE + +  E  ++ K E E K+ + + E+K+
Sbjct: 1041 EKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKK 1100

Query: 261  AREHDR 244
              E ++
Sbjct: 1101 KEEEEK 1106



 Score = 29.3 bits (64), Expect = 8.1
 Identities = 14/67 (20%), Positives = 37/67 (55%)
 Frame = -3

Query: 441  DKXVEXDREXRAADWQEAEKAKYLARFQREEVQIQAWENHQRAKIEAEMKRVEAKMERKR 262
            +K  + + E +  + +E +K +   + ++EE + +  E  ++ K E E K+ + + E+K+
Sbjct: 1049 EKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKK 1108

Query: 261  AREHDRL 241
              E +++
Sbjct: 1109 QEEGEKM 1115

>AZI1_HUMAN (Q9UPN4) 5-azacytidine-induced protein 1 (Pre-acrosome localization|
           protein 1) (Centrosomal protein of 131 kDa) (Cep131
           protein)
          Length = 1083

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 411 RAADWQEAEKAKYLARFQREEVQIQAWENHQRAKIEAEMKRVEAKMERKRAREHDR 244
           R  +  E E  +++ +  +  V IQ W  HQ  +  A   R+E  ++ KR  +  R
Sbjct: 252 RRKEVTEEEAERFIHQVNQAAVTIQRWYRHQVQRRGAGAARLEHLLQAKREEQRQR 307

>TRHY_HUMAN (Q07283) Trichohyalin|
          Length = 1898

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
 Frame = -3

Query: 441  DKXVEXDREXRAADWQEAEKAK-YLARFQREEVQIQAWENHQRAKIEAEMKR---VEAKM 274
            +K    +RE +  + +E ++ +  L R +RE+ + Q WE   R K E + +    +  + 
Sbjct: 996  EKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREER 1055

Query: 273  ERKRAREHDR 244
            E++R +E +R
Sbjct: 1056 EKRRLQERER 1065

>RL29_MYCPN (Q50310) 50S ribosomal protein L29|
          Length = 111

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 411 RAADWQEAEKAKY-LARFQREEVQIQAWENHQRAKIEAEMKRVEAKMERKRAREHD 247
           R  +WQE E+AKY L   +  E  + AW+ H  A         +AK+ + RA+  D
Sbjct: 61  RKLNWQE-EQAKYKLLTKKTNEAAVNAWKQHLEAN--------KAKLLKSRAKRED 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,034,019
Number of Sequences: 219361
Number of extensions: 678300
Number of successful extensions: 2153
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2148
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)