ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1m21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK058771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 3e-82
2dbj|AK121787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 8e-80
3ref|NM_187566.1| Oryza sativa (japonica cultivar-group), predic... 303 3e-79
4dbj|AK102865.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 5e-78
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 125 2e-25
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
7gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome... 125 2e-25
8ref|XM_463880.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-10
9dbj|AK102604.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 9e-09
11dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D... 70 9e-09
12ref|XM_473920.1| Oryza sativa (japonica cultivar-group), predic... 46 0.12
13gb|AC168279.3| Mus musculus 10 BAC RP23-345H24 (Roswell Park Can... 46 0.12
14gb|AC118733.8| Mus musculus chromosome 10, clone RP24-170A20, co... 46 0.12
15ref|XM_843827.1| PREDICTED: Canis familiaris similar to DnaJ-lik... 46 0.12
16emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 46 0.12
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
18dbj|AK060209.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
19gb|AC120870.8| Mus musculus chromosome 1, clone RP23-15D1, compl... 44 0.49
20gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, co... 44 0.49
21gb|AC132264.3| Mus musculus BAC clone RP24-371N18 from chromosom... 44 0.49
22gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's H... 44 0.49
23emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on ch... 44 0.49
24gb|AC091988.3| Homo sapiens chromosome 5 clone RP11-73G8, comple... 44 0.49
25gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, comp... 44 0.49
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
27gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, comple... 44 0.49
28dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
29dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
30gb|AC149281.2| Mus musculus BAC clone RP23-287D14 from 19, compl... 44 0.49
31gb|AE006421.1| Lactococcus lactis subsp. lactis IL1403 section 1... 42 1.9
32gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 42 1.9
33gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 42 1.9
34dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
35gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 42 1.9
36dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
37dbj|AP002873.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
38dbj|AK099276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
39dbj|AK070389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
40gb|AC170597.2| Mus musculus BAC clone RP23-391A19 from chromosom... 42 1.9
41gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, comple... 42 1.9
42gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, comp... 40 7.7
43gb|AC148934.2| Pan troglodytes BAC clone CH251-557M20 from Y, co... 40 7.7
44gb|AC138716.2| Mus musculus BAC clone RP23-241B5 from chromosome... 40 7.7
45gb|AC158349.5| Mus musculus chromosome 8, clone RP24-229D22, com... 40 7.7
46gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, comple... 40 7.7
47gb|AC147151.2| Pan troglodytes BAC clone CH251-205A10 from Y, co... 40 7.7
48gb|AC122358.2| Mus musculus BAC clone RP23-406B6 from chromosome... 40 7.7
49ref|XM_541245.2| PREDICTED: Canis familiaris similar to A-kinase... 40 7.7
50gb|AC126071.5| Rattus norvegicus 10 BAC CH230-209B21 (Children's... 40 7.7
51emb|Z98255.2|HS279N11 Human DNA sequence from clone RP1-279N11 o... 40 7.7
52ref|NM_001410.1| Homo sapiens multiple EGF-like-domains 8 (MEGF8... 40 7.7
53gb|AC157907.2| Mus musculus chromosome 19, clone RP23-79H21, com... 40 7.7
54gb|AC027451.11| Homo sapiens chromosome 8, clone RP11-696P8, com... 40 7.7
55gb|AY280362.1| Homo sapiens EGF domain-containing protein mRNA, ... 40 7.7
56gb|AE014180.1| Mus musculus piebald deletion region section 8 of... 40 7.7
57gb|AC011497.6| Homo sapiens chromosome 19 clone CTB-50E14, compl... 40 7.7
58dbj|BS000616.1| Pan troglodytes chromosome Y clone:PTB-085B05, c... 40 7.7
59dbj|BS000581.1| Pan troglodytes chromosome Y clone:PTB-115D04, c... 40 7.7
60gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.7
61gb|AC104519.2| Genomic sequence for Mus musculus, clone RP23-8L6... 40 7.7
62gb|AC097065.2| Homo sapiens chromosome 1 clone RP11-532L16, comp... 40 7.7
63gb|AC023245.5|AC023245 Homo sapiens chromosome 8, clone RP11-25D... 40 7.7
64gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hos... 40 7.7
65gb|AC159912.9| Mus musculus 6 BAC RP24-314B1 (Roswell Park Cance... 40 7.7
66gb|AC155819.2| Mus musculus BAC clone RP23-402F16 from chromosom... 40 7.7
67dbj|AB011541.2| Homo sapiens mRNA for MEGF8, partial cds 40 7.7
68gb|AC011749.2|AC011749 Homo sapiens BAC clone RP11-455E3 from Y,... 40 7.7
69dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
70gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, comple... 40 7.7
71gb|AC150399.2| Branchiostoma floridae clone CH302-23H18, complet... 40 7.7
72gb|AC141878.4| Mus musculus BAC clone RP24-257N14 from 14, compl... 40 7.7
73gb|AC004384.1|AC004384 Human Chromosome X clone bWXD531, complet... 40 7.7
74gb|M68900.1|EMENIRA A.nidulans NIRA protein (nirA) gene, complet... 40 7.7
75gb|M20501.1|CELCEREPB C.elegans CeRep3 repeat DNA, clone CeRep3.2 40 7.7 
>dbj|AK058771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H05, full
            insert sequence
          Length = 1510

 Score =  313 bits (158), Expect = 3e-82
 Identities = 313/363 (86%), Gaps = 2/363 (0%)
 Strand = Plus / Minus

                                                                        
Query: 76   atcataggcaccagcaccagcaggnagnattgaggaaggtatgtgcccggtcttacggat 135
            |||| ||||||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 1373 atcacaggcaccagcaccagcagg-ag-attgaggaaggtatgtgcccggttttccggat 1316

                                                                        
Query: 136  ctgcgccgcctgctcctccgttctctctgcttcttggctcctcctcgcctcagcggcctc 195
            ||| |||||||||||||| |||||  ||||||||||| || |||| | ||||||||||||
Sbjct: 1315 ctgagccgcctgctcctcagttcttgctgcttcttggttcttcctggactcagcggcctc 1256

                                                                        
Query: 196  cctctttgcctctgctctgcgtctcgctgatgccatcttccgagcaagcctgtcatgctc 255
            |||| | ||||||||  || | || || | ||||| ||| |  | ||||||||| |||||
Sbjct: 1255 cctcctcgcctctgccttgtgccttgcagctgccaacttgctcgaaagcctgtcctgctc 1196

                                                                        
Query: 256  gcgagcacgctttctttccatctttgcctctactctcttcatttcagcttcaatttttgc 315
            |||||| | |||  | || ||||||||||| |  ||||||||||||||||||||||||||
Sbjct: 1195 gcgagctctcttgatctctatctttgcctccatcctcttcatttcagcttcaatttttgc 1136

                                                                        
Query: 316  tctctggtgattttcccaagcttggatctgtacctcttcccgctgaaaccttgcaagata 375
            | ||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 1135 tttctggtggttttcccaagcttgaatctttacctcttccctctgaaaccttgcaagata 1076

                                                                        
Query: 376  ctttgctttctctgcctcctgccaatctgcggcacggntctctctgtcnatttctacanc 435
             ||||||||||||||||||| ||||||||| |||||   ||||||||| ||||||||| |
Sbjct: 1075 ttttgctttctctgcctcctcccaatctgcagcacgagcctctctgtcgatttctacagc 1016

               
Query: 436  ctt 438
            |||
Sbjct: 1015 ctt 1013
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>dbj|AK121787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094C20, full
            insert sequence
          Length = 1579

 Score =  305 bits (154), Expect = 8e-80
 Identities = 312/363 (85%), Gaps = 2/363 (0%)
 Strand = Plus / Minus

                                                                        
Query: 76   atcataggcaccagcaccagcaggnagnattgaggaaggtatgtgcccggtcttacggat 135
            |||| ||||||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 1446 atcacaggcaccagcaccagcagg-ag-attgaggaaggtatgtgcccggttttccggat 1389

                                                                        
Query: 136  ctgcgccgcctgctcctccgttctctctgcttcttggctcctcctcgcctcagcggcctc 195
            ||| ||||||||||| || |||||  ||||||||||| || |||| | ||||||||||||
Sbjct: 1388 ctgagccgcctgctcttcagttcttgctgcttcttggttcttcctggactcagcggcctc 1329

                                                                        
Query: 196  cctctttgcctctgctctgcgtctcgctgatgccatcttccgagcaagcctgtcatgctc 255
            |||| | ||||||||  || | || || | ||||| ||| |  | ||||||||| |||||
Sbjct: 1328 cctcctcgcctctgccttgtgccttgcagctgccaacttgctcgaaagcctgtcctgctc 1269

                                                                        
Query: 256  gcgagcacgctttctttccatctttgcctctactctcttcatttcagcttcaatttttgc 315
            |||||| | |||  | || ||||||||||| |  ||||||||||||||||||||||||||
Sbjct: 1268 gcgagctctcttgatctctatctttgcctccatcctcttcatttcagcttcaatttttgc 1209

                                                                        
Query: 316  tctctggtgattttcccaagcttggatctgtacctcttcccgctgaaaccttgcaagata 375
            | ||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 1208 tttctggtggttttcccaagcttgaatctttacctcttccctctgaaaccttgcaagata 1149

                                                                        
Query: 376  ctttgctttctctgcctcctgccaatctgcggcacggntctctctgtcnatttctacanc 435
             ||||||||||||||||||| ||||||||| |||||   ||||||||| ||||||||| |
Sbjct: 1148 ttttgctttctctgcctcctcccaatctgcagcacgagcctctctgtcgatttctacagc 1089

               
Query: 436  ctt 438
            |||
Sbjct: 1088 ctt 1086
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>ref|NM_187566.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1281

 Score =  303 bits (153), Expect = 3e-79
 Identities = 308/358 (86%), Gaps = 2/358 (0%)
 Strand = Plus / Minus

                                                                        
Query: 81   aggcaccagcaccagcaggnagnattgaggaaggtatgtgcccggtcttacggatctgcg 140
            ||||||||||||||||||| || ||||||||||||||||||||||| || |||||||| |
Sbjct: 1277 aggcaccagcaccagcagg-ag-attgaggaaggtatgtgcccggttttccggatctgag 1220

                                                                        
Query: 141  ccgcctgctcctccgttctctctgcttcttggctcctcctcgcctcagcggcctccctct 200
            |||||||||| || |||||  ||||||||||| || |||| | |||||||||||||||| 
Sbjct: 1219 ccgcctgctcttcagttcttgctgcttcttggttcttcctggactcagcggcctccctcc 1160

                                                                        
Query: 201  ttgcctctgctctgcgtctcgctgatgccatcttccgagcaagcctgtcatgctcgcgag 260
            | ||||||||  || | || || | ||||| ||| |  | ||||||||| ||||||||||
Sbjct: 1159 tcgcctctgccttgtgccttgcagctgccaacttgctcgaaagcctgtcctgctcgcgag 1100

                                                                        
Query: 261  cacgctttctttccatctttgcctctactctcttcatttcagcttcaatttttgctctct 320
            | | |||  | || ||||||||||| |  ||||||||||||||||||||||||||| |||
Sbjct: 1099 ctctcttgatctctatctttgcctccatcctcttcatttcagcttcaatttttgctttct 1040

                                                                        
Query: 321  ggtgattttcccaagcttggatctgtacctcttcccgctgaaaccttgcaagatactttg 380
            |||| |||||||||||||| |||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 1039 ggtggttttcccaagcttgaatctttacctcttccctctgaaaccttgcaagatattttg 980

                                                                      
Query: 381  ctttctctgcctcctgccaatctgcggcacggntctctctgtcnatttctacancctt 438
            ||||||||||||||| ||||||||| |||||   ||||||||| ||||||||| ||||
Sbjct: 979  ctttctctgcctcctcccaatctgcagcacgagcctctctgtcgatttctacagcctt 922
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>dbj|AK102865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111K19, full
            insert sequence
          Length = 2113

 Score =  299 bits (151), Expect = 5e-78
 Identities = 312/363 (85%), Gaps = 4/363 (1%)
 Strand = Plus / Minus

                                                                        
Query: 76   atcataggcaccagcaccagcaggnagnattgaggaaggtatgtgcccggtcttacggat 135
            |||| ||||||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 1980 atcacaggcaccagcaccagcagg-ag-attgaggaaggtatgtgcccggttttccggat 1923

                                                                        
Query: 136  ctgcgccgcctgctcctccgttctctctgcttcttggctcctcctcgcctcagcggcctc 195
            ||| ||||||||||| || |||||  ||||||||||| || |||| | ||||||||||||
Sbjct: 1922 ctgagccgcctgctcttcagttcttgctgcttcttggttcttcctggactcagcggcctc 1863

                                                                        
Query: 196  cctctttgcctctgctctgcgtctcgctgatgccatcttccgagcaagcctgtcatgctc 255
            |||| | ||||||||  |||  || || | ||||| ||| |  | ||||||||| |||||
Sbjct: 1862 cctcctcgcctctgccttgc--cttgcagctgccaacttgctcgaaagcctgtcctgctc 1805

                                                                        
Query: 256  gcgagcacgctttctttccatctttgcctctactctcttcatttcagcttcaatttttgc 315
            |||||| | |||  | || ||||||||||| |  ||||||||||||||||||||||||||
Sbjct: 1804 gcgagctctcttgatctctatctttgcctccatcctcttcatttcagcttcaatttttgc 1745

                                                                        
Query: 316  tctctggtgattttcccaagcttggatctgtacctcttcccgctgaaaccttgcaagata 375
            | ||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 1744 tttctggtggttttcccaagcttgaatctttacctcttccctctgaaaccttgcaagata 1685

                                                                        
Query: 376  ctttgctttctctgcctcctgccaatctgcggcacggntctctctgtcnatttctacanc 435
             ||||||||||||||||||| ||||||||| |||||   ||||||||| ||||||||| |
Sbjct: 1684 ttttgctttctctgcctcctcccaatctgcagcacgagcctctctgtcgatttctacagc 1625

               
Query: 436  ctt 438
            |||
Sbjct: 1624 ctt 1622
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 2e-25
 Identities = 119/135 (88%), Gaps = 2/135 (1%)
 Strand = Plus / Plus

                                                                           
Query: 76      atcataggcaccagcaccagcaggnagnattgaggaaggtatgtgcccggtcttacggat 135
               |||| ||||||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 1089064 atcacaggcaccagcaccagcagg-ag-attgaggaaggtatgtgcccggttttccggat 1089121

                                                                           
Query: 136     ctgcgccgcctgctcctccgttctctctgcttcttggctcctcctcgcctcagcggcctc 195
               ||| ||||||||||| || |||||  ||||||||||| || |||| | ||||||||||||
Sbjct: 1089122 ctgagccgcctgctcttcagttcttgctgcttcttggttcttcctggactcagcggcctc 1089181

                              
Query: 196     cctctttgcctctgc 210
               |||| | ||||||||
Sbjct: 1089182 cctcctcgcctctgc 1089196



 Score =  113 bits (57), Expect = 6e-22
 Identities = 72/77 (93%)
 Strand = Plus / Plus

                                                                           
Query: 290     ctcttcatttcagcttcaatttttgctctctggtgattttcccaagcttggatctgtacc 349
               ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||
Sbjct: 1089599 ctcttcatttcagcttcaatttttgctttctggtggttttcccaagcttgaatctttacc 1089658

                                
Query: 350     tcttcccgctgaaacct 366
               ||||||| |||||||||
Sbjct: 1089659 tcttccctctgaaacct 1089675



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                           
Query: 363     accttgcaagatactttgctttctctgcctcctgccaatctgcggcacggntctctctgt 422
               ||||||||||||| ||||||||||||||||||| ||||||||| |||||   ||||||||
Sbjct: 1089937 accttgcaagatattttgctttctctgcctcctcccaatctgcagcacgagcctctctgt 1089996

                               
Query: 423     cnatttctacancctt 438
               | ||||||||| ||||
Sbjct: 1089997 cgatttctacagcctt 1090012



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 177      tcctcgcctcagcggcctccc 197
                |||||||||||||||||||||
Sbjct: 20377189 tcctcgcctcagcggcctccc 20377209
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 2e-25
 Identities = 119/135 (88%), Gaps = 2/135 (1%)
 Strand = Plus / Plus

                                                                           
Query: 76      atcataggcaccagcaccagcaggnagnattgaggaaggtatgtgcccggtcttacggat 135
               |||| ||||||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 1089062 atcacaggcaccagcaccagcagg-ag-attgaggaaggtatgtgcccggttttccggat 1089119

                                                                           
Query: 136     ctgcgccgcctgctcctccgttctctctgcttcttggctcctcctcgcctcagcggcctc 195
               ||| ||||||||||| || |||||  ||||||||||| || |||| | ||||||||||||
Sbjct: 1089120 ctgagccgcctgctcttcagttcttgctgcttcttggttcttcctggactcagcggcctc 1089179

                              
Query: 196     cctctttgcctctgc 210
               |||| | ||||||||
Sbjct: 1089180 cctcctcgcctctgc 1089194



 Score =  113 bits (57), Expect = 6e-22
 Identities = 72/77 (93%)
 Strand = Plus / Plus

                                                                           
Query: 290     ctcttcatttcagcttcaatttttgctctctggtgattttcccaagcttggatctgtacc 349
               ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||
Sbjct: 1089597 ctcttcatttcagcttcaatttttgctttctggtggttttcccaagcttgaatctttacc 1089656

                                
Query: 350     tcttcccgctgaaacct 366
               ||||||| |||||||||
Sbjct: 1089657 tcttccctctgaaacct 1089673



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                           
Query: 363     accttgcaagatactttgctttctctgcctcctgccaatctgcggcacggntctctctgt 422
               ||||||||||||| ||||||||||||||||||| ||||||||| |||||   ||||||||
Sbjct: 1089935 accttgcaagatattttgctttctctgcctcctcccaatctgcagcacgagcctctctgt 1089994

                               
Query: 423     cnatttctacancctt 438
               | ||||||||| ||||
Sbjct: 1089995 cgatttctacagcctt 1090010



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 177      tcctcgcctcagcggcctccc 197
                |||||||||||||||||||||
Sbjct: 20370218 tcctcgcctcagcggcctccc 20370238
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>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11,
              complete sequence
          Length = 126827

 Score =  125 bits (63), Expect = 2e-25
 Identities = 119/135 (88%), Gaps = 2/135 (1%)
 Strand = Plus / Plus

                                                                          
Query: 76     atcataggcaccagcaccagcaggnagnattgaggaaggtatgtgcccggtcttacggat 135
              |||| ||||||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 109279 atcacaggcaccagcaccagcagg-ag-attgaggaaggtatgtgcccggttttccggat 109336

                                                                          
Query: 136    ctgcgccgcctgctcctccgttctctctgcttcttggctcctcctcgcctcagcggcctc 195
              ||| ||||||||||| || |||||  ||||||||||| || |||| | ||||||||||||
Sbjct: 109337 ctgagccgcctgctcttcagttcttgctgcttcttggttcttcctggactcagcggcctc 109396

                             
Query: 196    cctctttgcctctgc 210
              |||| | ||||||||
Sbjct: 109397 cctcctcgcctctgc 109411



 Score =  113 bits (57), Expect = 6e-22
 Identities = 72/77 (93%)
 Strand = Plus / Plus

                                                                          
Query: 290    ctcttcatttcagcttcaatttttgctctctggtgattttcccaagcttggatctgtacc 349
              ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||
Sbjct: 109814 ctcttcatttcagcttcaatttttgctttctggtggttttcccaagcttgaatctttacc 109873

                               
Query: 350    tcttcccgctgaaacct 366
              ||||||| |||||||||
Sbjct: 109874 tcttccctctgaaacct 109890



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                          
Query: 363    accttgcaagatactttgctttctctgcctcctgccaatctgcggcacggntctctctgt 422
              ||||||||||||| ||||||||||||||||||| ||||||||| |||||   ||||||||
Sbjct: 110152 accttgcaagatattttgctttctctgcctcctcccaatctgcagcacgagcctctctgt 110211

                              
Query: 423    cnatttctacancctt 438
              | ||||||||| ||||
Sbjct: 110212 cgatttctacagcctt 110227
to top
>ref|XM_463880.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1874

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                        
Query: 294  tcatttcagcttcaatttttgctctctggtgattttcccaagcttggatctgtacctctt 353
            ||||||||||||| |||||||||||||| |||| |||||| ||||||||||  | |||||
Sbjct: 1447 tcatttcagcttcgatttttgctctctgatgatcttcccatgcttggatcttaatctctt 1388

                                                      
Query: 354  cccgctgaaaccttgcaagatactttgctttctctgcctcct 395
            | || | ||| ||||| | ||| || || |||||||||||||
Sbjct: 1387 ctcgtttaaatcttgctaaatatttagccttctctgcctcct 1346
to top
>dbj|AK102604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098O09, full
            insert sequence
          Length = 1874

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                        
Query: 294  tcatttcagcttcaatttttgctctctggtgattttcccaagcttggatctgtacctctt 353
            ||||||||||||| |||||||||||||| |||| |||||| ||||||||||  | |||||
Sbjct: 1447 tcatttcagcttcgatttttgctctctgatgatcttcccatgcttggatcttaatctctt 1388

                                                      
Query: 354  cccgctgaaaccttgcaagatactttgctttctctgcctcct 395
            | || | ||| ||||| | ||| || || |||||||||||||
Sbjct: 1387 ctcgtttaaatcttgctaaatatttagccttctctgcctcct 1346
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                 
Query: 294    tcatttcagcttcaatttttgctctctggtgattttcccaagcttggatct 344
              ||||||||||||| |||||||||||||| |||| |||||| ||||||||||
Sbjct: 893022 tcatttcagcttcgatttttgctctctgatgatcttcccatgcttggatct 892972



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 107     gaggaaggtatgtgcccggt 126
               ||||||||||||||||||||
Sbjct: 3086516 gaggaaggtatgtgcccggt 3086535
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>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1442_E05
          Length = 162407

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                 
Query: 294    tcatttcagcttcaatttttgctctctggtgattttcccaagcttggatct 344
              ||||||||||||| |||||||||||||| |||| |||||| ||||||||||
Sbjct: 102230 tcatttcagcttcgatttttgctctctgatgatcttcccatgcttggatct 102180
to top
>ref|XM_473920.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1596

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 282  cctctactctcttcatttcagcttcaatttttgct 316
            |||||| |||||||||||||| ||| |||||||||
Sbjct: 1381 cctctattctcttcatttcagattctatttttgct 1347
to top
>gb|AC168279.3| Mus musculus 10 BAC RP23-345H24 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 196860

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 269   ctttccatctttgcctctactctcttc 295
             |||||||||| ||||||||||||||||
Sbjct: 55415 ctttccatctctgcctctactctcttc 55441
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>gb|AC118733.8| Mus musculus chromosome 10, clone RP24-170A20, complete sequence
          Length = 188335

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 269   ctttccatctttgcctctactctcttc 295
             |||||||||| ||||||||||||||||
Sbjct: 35480 ctttccatctctgcctctactctcttc 35454
to top
>ref|XM_843827.1| PREDICTED: Canis familiaris similar to DnaJ-like protein 2
           (LOC607480), mRNA
          Length = 1442

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 151 ctccgttctctctgcttcttggctcctcctc 181
           ||||||||||||||| ||||| |||||||||
Sbjct: 408 ctccgttctctctgcatcttgcctcctcctc 378
to top
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 282    cctctactctcttcatttcagcttcaatttttgct 316
              |||||| |||||||||||||| ||| |||||||||
Sbjct: 138855 cctctattctcttcatttcagattctatttttgct 138821
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 282      cctctactctcttcatttcagcttcaatttttgct 316
                |||||| |||||||||||||| ||| |||||||||
Sbjct: 31561172 cctctattctcttcatttcagattctatttttgct 31561138
to top
>dbj|AK060209.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B03, full
           insert sequence
          Length = 1109

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 282 cctctactctcttcatttcagcttcaatttttgct 316
           |||||| |||||||||||||| ||| |||||||||
Sbjct: 641 cctctattctcttcatttcagattctatttttgct 607
to top
>gb|AC120870.8| Mus musculus chromosome 1, clone RP23-15D1, complete sequence
          Length = 233914

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 148    ctcctccgttctctctgcttct 169
              ||||||||||||||||||||||
Sbjct: 186805 ctcctccgttctctctgcttct 186784
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>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence
          Length = 172490

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 369   caagatactttgctttctctgcctcctgcc 398
             ||||||||||||| |||||| |||||||||
Sbjct: 43415 caagatactttgccttctctccctcctgcc 43386
to top
>gb|AC132264.3| Mus musculus BAC clone RP24-371N18 from chromosome 19, complete sequence
          Length = 125468

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 286    tactctcttcatttcagcttca 307
              ||||||||||||||||||||||
Sbjct: 112792 tactctcttcatttcagcttca 112813
to top
>gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 221236

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 26     gtttgtcaggtagcaaacattt 47
              ||||||||||||||||||||||
Sbjct: 188736 gtttgtcaggtagcaaacattt 188715
to top
>emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on chromosome 13 Contains the
              gene for the ortholog of rat and human ubiquinol-cytochrome
              c reductase, Rieske iron-sulfur polypeptide 1 UQCRFS1, a
              novel gene and a CpG island, complete sequence
          Length = 194065

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 375    actttgctttctctgcctcctg 396
              ||||||||||||||||||||||
Sbjct: 142022 actttgctttctctgcctcctg 142001
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>gb|AC091988.3| Homo sapiens chromosome 5 clone RP11-73G8, complete sequence
          Length = 148263

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 157    tctctctgcttcttggctcctc 178
              ||||||||||||||||||||||
Sbjct: 127421 tctctctgcttcttggctcctc 127400
to top
>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence
          Length = 228283

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 369    caagatactttgctttctctgcctcctgcc 398
              ||||||||||||| |||||| |||||||||
Sbjct: 131829 caagatactttgccttctctccctcctgcc 131800
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 309      tttttgctctctggtgattttc 330
                ||||||||||||||||||||||
Sbjct: 29008977 tttttgctctctggtgattttc 29008956



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 310      ttttgctctctggtgattttc 330
                |||||||||||||||||||||
Sbjct: 11356619 ttttgctctctggtgattttc 11356639
to top
>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence
          Length = 223367

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 275   atctttgcctctactctcttcatttc 300
             |||||| |||||||||||||||||||
Sbjct: 72036 atcttttcctctactctcttcatttc 72011
to top
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0047E11
          Length = 148109

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 309   tttttgctctctggtgattttc 330
             ||||||||||||||||||||||
Sbjct: 53335 tttttgctctctggtgattttc 53314
to top
>dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0454A11
          Length = 152240

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 309    tttttgctctctggtgattttc 330
              ||||||||||||||||||||||
Sbjct: 121600 tttttgctctctggtgattttc 121579
to top
>gb|AC149281.2| Mus musculus BAC clone RP23-287D14 from 19, complete sequence
          Length = 188944

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 286    tactctcttcatttcagcttca 307
              ||||||||||||||||||||||
Sbjct: 166074 tactctcttcatttcagcttca 166053
to top
>gb|AE006421.1| Lactococcus lactis subsp. lactis IL1403 section 183 of 218 of the
            complete genome
          Length = 10651

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 291  tcttcatttcagcttcaatttttgc 315
            |||||||||||||||||||| ||||
Sbjct: 7278 tcttcatttcagcttcaattgttgc 7302
to top
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 296 atttcagcttcaatttttgct 316
           |||||||||||||||||||||
Sbjct: 362 atttcagcttcaatttttgct 342
to top
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 293     ttcatttcagcttcaattttt 313
               |||||||||||||||||||||
Sbjct: 1268815 ttcatttcagcttcaattttt 1268795
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 310      ttttgctctctggtgattttc 330
                |||||||||||||||||||||
Sbjct: 15309243 ttttgctctctggtgattttc 15309223
to top
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
             sequence
          Length = 152883

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 177   tcctcgcctcagcggcctccc 197
             |||||||||||||||||||||
Sbjct: 21489 tcctcgcctcagcggcctccc 21509
to top
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0062G05
          Length = 152802

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 310   ttttgctctctggtgattttc 330
             |||||||||||||||||||||
Sbjct: 94874 ttttgctctctggtgattttc 94854
to top
>dbj|AP002873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0552C05
          Length = 136586

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 310   ttttgctctctggtgattttc 330
             |||||||||||||||||||||
Sbjct: 70204 ttttgctctctggtgattttc 70224
to top
>dbj|AK099276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H10, full
           insert sequence
          Length = 2393

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 tcctcgcctcagcggcctccc 197
           |||||||||||||||||||||
Sbjct: 341 tcctcgcctcagcggcctccc 361
to top
>dbj|AK070389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048I16, full
           insert sequence
          Length = 2466

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 tcctcgcctcagcggcctccc 197
           |||||||||||||||||||||
Sbjct: 414 tcctcgcctcagcggcctccc 434
to top
>gb|AC170597.2| Mus musculus BAC clone RP23-391A19 from chromosome 13, complete
             sequence
          Length = 223662

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   tctctctgcttcttggctcct 177
             |||||||||||||||||||||
Sbjct: 29840 tctctctgcttcttggctcct 29860
to top
>gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, complete sequence
          Length = 200157

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   tcctccgttctctctgcttct 169
             |||||||||||||||||||||
Sbjct: 83723 tcctccgttctctctgcttct 83743
to top
>gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, complete sequence
          Length = 165714

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   ttgctttctctgcctcctgc 397
             ||||||||||||||||||||
Sbjct: 70901 ttgctttctctgcctcctgc 70920
to top
>gb|AC148934.2| Pan troglodytes BAC clone CH251-557M20 from Y, complete sequence
          Length = 169254

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 374   tactttgctttctctgcctcctgc 397
             ||||||||||||| ||||||||||
Sbjct: 94197 tactttgctttctttgcctcctgc 94220
to top
>gb|AC138716.2| Mus musculus BAC clone RP23-241B5 from chromosome 14, complete sequence
          Length = 167083

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    ctttgctttctctgcctcct 395
              ||||||||||||||||||||
Sbjct: 147862 ctttgctttctctgcctcct 147881
to top
>gb|AC158349.5| Mus musculus chromosome 8, clone RP24-229D22, complete sequence
          Length = 163656

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    ttgctttctctgcctcctgc 397
              ||||||||||||||||||||
Sbjct: 142068 ttgctttctctgcctcctgc 142087
to top
>gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, complete sequence
          Length = 255921

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    tctctctgcttcttggctcc 176
              ||||||||||||||||||||
Sbjct: 124032 tctctctgcttcttggctcc 124013
to top
>gb|AC147151.2| Pan troglodytes BAC clone CH251-205A10 from Y, complete sequence
          Length = 174629

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 374    tactttgctttctctgcctcctgc 397
              ||||||||||||| ||||||||||
Sbjct: 153903 tactttgctttctttgcctcctgc 153926
to top
>gb|AC122358.2| Mus musculus BAC clone RP23-406B6 from chromosome 17, complete sequence
          Length = 184952

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   ctttctttccatctttgcctctac 288
             |||||||||||||| |||||||||
Sbjct: 65015 ctttctttccatctctgcctctac 64992
to top
>ref|XM_541245.2| PREDICTED: Canis familiaris similar to A-kinase anchor protein 7
            isoform gamma (Protein kinase A anchoring protein 7
            isoform gamma) (A-kinase anchoring protein 18)
            (LOC484128), mRNA
          Length = 2295

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 201  ttgcctctgctctgcgtctc 220
            ||||||||||||||||||||
Sbjct: 1718 ttgcctctgctctgcgtctc 1699
to top
>gb|AC126071.5| Rattus norvegicus 10 BAC CH230-209B21 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 227741

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    cctctttgcctctgctctgc 215
              ||||||||||||||||||||
Sbjct: 210550 cctctttgcctctgctctgc 210569
to top
>emb|Z98255.2|HS279N11 Human DNA sequence from clone RP1-279N11 on chromosome Xq11.2-13.3
              Contain the 3' end of a novel gene, complete sequence
          Length = 169998

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 289    tctcttcatttcagcttcaatttt 312
              |||||||| |||||||||||||||
Sbjct: 149390 tctcttcagttcagcttcaatttt 149367
to top
>ref|NM_001410.1| Homo sapiens multiple EGF-like-domains 8 (MEGF8), mRNA
          Length = 8307

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   taggcaccagcaccagcagg 99
            ||||||||||||||||||||
Sbjct: 1443 taggcaccagcaccagcagg 1424
to top
>gb|AC157907.2| Mus musculus chromosome 19, clone RP23-79H21, complete sequence
          Length = 153518

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   tttgctttctctgcctcctg 396
             ||||||||||||||||||||
Sbjct: 93050 tttgctttctctgcctcctg 93069
to top
>gb|AC027451.11| Homo sapiens chromosome 8, clone RP11-696P8, complete sequence
          Length = 168958

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 264   gctttctttccatctttgcctctactct 291
             ||||||||||||||| ||||||| ||||
Sbjct: 93086 gctttctttccatctatgcctcttctct 93113
to top
>gb|AY280362.1| Homo sapiens EGF domain-containing protein mRNA, complete cds
          Length = 8307

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   taggcaccagcaccagcagg 99
            ||||||||||||||||||||
Sbjct: 1443 taggcaccagcaccagcagg 1424
to top
>gb|AE014180.1| Mus musculus piebald deletion region section 8 of 11 of the complete
              sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    ctttgctttctctgcctcct 395
              ||||||||||||||||||||
Sbjct: 333977 ctttgctttctctgcctcct 333958
to top
>gb|AC011497.6| Homo sapiens chromosome 19 clone CTB-50E14, complete sequence
          Length = 168586

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     taggcaccagcaccagcagg 99
              ||||||||||||||||||||
Sbjct: 149126 taggcaccagcaccagcagg 149145
to top
>dbj|BS000616.1| Pan troglodytes chromosome Y clone:PTB-085B05, complete sequences
          Length = 74459

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 374   tactttgctttctctgcctcctgc 397
             ||||||||||||| ||||||||||
Sbjct: 58823 tactttgctttctttgcctcctgc 58800
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>dbj|BS000581.1| Pan troglodytes chromosome Y clone:PTB-115D04, complete sequence
          Length = 190533

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 374   tactttgctttctctgcctcctgc 397
             ||||||||||||| ||||||||||
Sbjct: 17397 tactttgctttctttgcctcctgc 17374
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 374      tactttgctttctctgcctcctgc 397
                ||||||||||||| ||||||||||
Sbjct: 21362542 tactttgctttctttgcctcctgc 21362565
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>gb|AC104519.2| Genomic sequence for Mus musculus, clone RP23-8L6, complete sequence
          Length = 197070

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 265   ctttctttccatctttgcctctac 288
             |||||||||||||| |||||||||
Sbjct: 30718 ctttctttccatctctgcctctac 30741
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>gb|AC097065.2| Homo sapiens chromosome 1 clone RP11-532L16, complete sequence
          Length = 176861

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   attttcccaagcttggatct 344
             ||||||||||||||||||||
Sbjct: 49975 attttcccaagcttggatct 49956
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>gb|AC023245.5|AC023245 Homo sapiens chromosome 8, clone RP11-25D10, complete sequence
          Length = 175205

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 264  gctttctttccatctttgcctctactct 291
            ||||||||||||||| ||||||| ||||
Sbjct: 3901 gctttctttccatctatgcctcttctct 3928
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>gb|AC127185.3| Rattus norvegicus  BAC CH230-28E5 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 233648

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    cctctttgcctctgctctgc 215
              ||||||||||||||||||||
Sbjct: 149154 cctctttgcctctgctctgc 149135
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>gb|AC159912.9| Mus musculus 6 BAC RP24-314B1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 178951

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   ctgtacctcttcccgctgaa 362
             ||||||||||||||||||||
Sbjct: 97493 ctgtacctcttcccgctgaa 97474
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>gb|AC155819.2| Mus musculus BAC clone RP23-402F16 from chromosome 12, complete
             sequence
          Length = 201181

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tctgcttcttggctcctcct 180
             ||||||||||||||||||||
Sbjct: 13332 tctgcttcttggctcctcct 13351
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>dbj|AB011541.2| Homo sapiens mRNA for MEGF8, partial cds
          Length = 9984

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   taggcaccagcaccagcagg 99
            ||||||||||||||||||||
Sbjct: 3120 taggcaccagcaccagcagg 3101
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>gb|AC011749.2|AC011749 Homo sapiens BAC clone RP11-455E3 from Y, complete sequence
          Length = 205053

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 374   tactttgctttctctgcctcctgc 397
             ||||||||||||| ||||||||||
Sbjct: 38592 tactttgctttctttgcctcctgc 38615
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>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419H03
          Length = 129020

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   gaggaaggtatgtgcccggt 126
             ||||||||||||||||||||
Sbjct: 14670 gaggaaggtatgtgcccggt 14689
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>gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, complete sequence
          Length = 184888

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tctgcttcttggctcctcct 180
             ||||||||||||||||||||
Sbjct: 55402 tctgcttcttggctcctcct 55383
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>gb|AC150399.2| Branchiostoma floridae clone CH302-23H18, complete sequence
          Length = 148717

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    ttgctttctctgcctcctgc 397
              ||||||||||||||||||||
Sbjct: 133818 ttgctttctctgcctcctgc 133837
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>gb|AC141878.4| Mus musculus BAC clone RP24-257N14 from 14, complete sequence
          Length = 192097

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    ctttgctttctctgcctcct 395
              ||||||||||||||||||||
Sbjct: 183813 ctttgctttctctgcctcct 183794
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>gb|AC004384.1|AC004384 Human Chromosome X clone bWXD531, complete sequence
          Length = 164675

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 289    tctcttcatttcagcttcaatttt 312
              |||||||| |||||||||||||||
Sbjct: 138647 tctcttcagttcagcttcaatttt 138670
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>gb|M68900.1|EMENIRA A.nidulans NIRA protein (nirA) gene, complete cds
          Length = 5835

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  tgcgccgcctgctcctccgt 156
            ||||||||||||||||||||
Sbjct: 2550 tgcgccgcctgctcctccgt 2569
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>gb|M20501.1|CELCEREPB C.elegans CeRep3 repeat DNA, clone CeRep3.2
          Length = 1360

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  tcagcttcaatttttgctct 318
            ||||||||||||||||||||
Sbjct: 1106 tcagcttcaatttttgctct 1087


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,215,405
Number of Sequences: 3902068
Number of extensions: 4215405
Number of successful extensions: 95600
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95156
Number of HSP's gapped (non-prelim): 437
length of query: 566
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 543
effective length of database: 17,143,297,704
effective search space: 9308810653272
effective search space used: 9308810653272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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