Clone Name	rbags1m05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_467840.1| Oryza sativa (japonica cultivar-group), mRNA	287	2e-74
2	dbj|AK067176.1| Oryza sativa (japonica cultivar-group) cDNA clon...	280	6e-72
3	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	202	1e-48
4	dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic D...	202	1e-48
5	gb|AY111222.1| Zea mays CL30969_1 mRNA sequence	94	7e-16
6	gb|AY110363.1| Zea mays CL13131_1 mRNA sequence	94	7e-16
7	emb|AJ635177.1| Mangifera indica microsatellite DNA, locus mMiCI...	50	0.010
8	gb|AC149131.3| Medicago truncatula chromosome 7 BAC clone mth2-1...	48	0.038
9	gb|AC149040.2| Medicago truncatula chromosome 7 BAC clone mth2-9...	48	0.038
10	gb|AC119415.13| Medicago truncatula clone mth2-27n2, complete se...	46	0.15
11	gb|AC126789.20| Medicago truncatula clone mth2-36n23, complete s...	46	0.15
12	gb|AC157375.2| Medicago truncatula chromosome 2 BAC clone mth2-5...	46	0.15
13	gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, co...	44	0.59
14	gb|AC024068.16| Mus musculus strain 129S6/SvEvTac clone rp22-86n...	44	0.59
15	gb|AC158577.5| Mus musculus chromosome 1, clone RP24-187D4, comp...	44	0.59
16	ref|NM_001014337.1| Danio rerio zgc:113176 (zgc:113176), mRNA	44	0.59
17	gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome	44	0.59
18	gb|BC091830.1| Danio rerio zgc:113176, mRNA (cDNA clone MGC:1131...	44	0.59
19	gb|AC115894.6| Mus musculus chromosome 18, clone RP24-443A14, co...	44	0.59
20	gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome	42	2.3
21	gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ...	42	2.3
22	emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome...	42	2.3
23	emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 compl...	42	2.3
24	dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	42	2.3
25	gb|AC164095.4| Mus musculus BAC clone RP23-355A22 from chromosom...	40	9.2
26	gb|AE010424.1| Methanopyrus kandleri AV19 section 123 of 157 of ...	40	9.2
27	ref|XM_712021.1| Candida albicans SC5314 hypothetical protein (C...	40	9.2
28	ref|XM_712020.1| Candida albicans SC5314 hypothetical protein (C...	40	9.2
29	ref|XM_711942.1| Candida albicans SC5314 hypothetical protein (C...	40	9.2
30	ref|XM_711941.1| Candida albicans SC5314 hypothetical protein (C...	40	9.2
31	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	40	9.2
32	gb|AC161762.4| Mus musculus BAC clone RP23-371K18 from chromosom...	40	9.2
33	gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno...	40	9.2
34	emb|AL157384.8| Human DNA sequence from clone RP11-173G21 on chr...	40	9.2
35	emb|AL049650.8|HSJ734P14 Human DNA sequence from clone RP4-734P1...	40	9.2
36	emb|BX119319.7| Zebrafish DNA sequence from clone CH211-195K14 i...	40	9.2
37	emb|CR555306.1| Azoarcus sp. EbN1 complete genome	40	9.2
38	emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BA...	40	9.2
39	gb|AF486251.1| Erpobdellid sp. IRT-2002 myosin heavy chain type ...	40	9.2
40	gb|AC102264.26| Mus musculus chromosome 7, clone RP24-230F10, co...	40	9.2
41	gb|DQ397629.1| Cenarchaeum symbiosum clone C01B12, complete sequ...	40	9.2
42	gb|CP000282.1| Saccharophagus degradans 2-40, complete genome	40	9.2
43	gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome	40	9.2
44	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	9.2
45	gb|AC022274.5|AC022274 Homo sapiens BAC clone RP11-697M17 from 8...	40	9.2
46	emb|AL114629.1|CNS01BSD Botrytis cinerea strain T4 cDNA library	40	9.2
47	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.2
48	gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7...	40	9.2
49	gb|AY220878.1| Homo sapiens Fanconi anemia, complementation grou...	40	9.2
50	dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ...	40	9.2
51	emb|BX323557.8| Zebrafish DNA sequence from clone DKEYP-86B9 in ...	40	9.2
52	dbj|AK063103.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	9.2
53	gb|AE015451.1| Pseudomonas putida KT2440 complete genome	40	9.2
54	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	40	9.2
55	emb|AL844852.11| Mouse DNA sequence from clone RP23-260N23 on ch...	40	9.2

---

>ref|XM_467840.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 940

 Score =  287 bits (145), Expect = 2e-74
 Identities = 258/296 (87%)
 Strand = Plus / Minus

                                                                       
Query: 144 tgttgccgcagngccatctcagtctcgctcttccacgatgcatgtgacgattgccctctc 203
           ||||||||||| ||||||||||| || ||||||||||| || ||||| |||||||| |||
Sbjct: 750 tgttgccgcagggccatctcagtttcactcttccacgaagcgtgtgatgattgccccctc 691

                                                                       
Query: 204 atcctcttcactttctccttgtccttgacagcagaacccttcttcttctcgggttctttt 263
           ||||| || |  ||||||||||| ||||| |  || || |||||||| || || ||| ||
Sbjct: 690 atccttttgatcttctccttgtctttgacggtcgatcctttcttcttttctggctctctt 631

                                                                       
Query: 264 gcctgcactggtctatcgttgcaaacagggcataccattccttgggcgtgtgaataggtc 323
           |||||| |||||||||||||||||||||| || ||||| ||| | |||||||||||||||
Sbjct: 630 gcctgctctggtctatcgttgcaaacaggacacaccatacctcgtgcgtgtgaataggtc 571

                                                                       
Query: 324 tttggtataccacattggaggcacattcttagaagctcggcagcatcttctggaccagga 383
           ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 570 tttggtataccacattggaggcacattcttagaagatcagcagcatcttctggaccagga 511

                                                                   
Query: 384 tttgcagcgcctattttcctctttccatcaacagaacctggagggttgccaccatt 439
           ||||| || |||||| | |||||||| |||  |||| ||||||||||| |||||||
Sbjct: 510 tttgccgcacctattattctctttccttcagtagaaactggagggttggcaccatt 455



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 626 gcggcgatcgagcacgccgagcgcctccccgacctcctcgggct 669
           |||||| |||||||| |||||||||||| || ||||||||||||
Sbjct: 349 gcggcggtcgagcactccgagcgcctccacggcctcctcgggct 306



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                       
Query: 532 cactgctaactcgtccacggatggcaaccatctgtggtttcgccgccacaaccgcaccgg 591
           |||||||||||||| |||| || |||||||  || ||||| ||  ||||||| ||||| |
Sbjct: 449 cactgctaactcgttcacgaattgcaaccaattgaggttttgcgaccacaacggcaccag 390

                        
Query: 592 gaggtggcggctt 604
           |||| ||| ||||
Sbjct: 389 gaggcggctgctt 377

---

>dbj|AK067176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097D23, full
           insert sequence
          Length = 939

 Score =  280 bits (141), Expect = 6e-72
 Identities = 257/296 (86%)
 Strand = Plus / Minus

                                                                       
Query: 144 tgttgccgcagngccatctcagtctcgctcttccacgatgcatgtgacgattgccctctc 203
           ||||||||||| ||||||||||| || ||||||||||| || ||||| |||||||| |||
Sbjct: 749 tgttgccgcagggccatctcagtttcactcttccacgaagcgtgtgatgattgccccctc 690

                                                                       
Query: 204 atcctcttcactttctccttgtccttgacagcagaacccttcttcttctcgggttctttt 263
           ||||| || |  ||||||||||| ||||| |  || || |||||||| || || ||| ||
Sbjct: 689 atccttttgatcttctccttgtctttgacggtcgatcctttcttcttttctggctctctt 630

                                                                       
Query: 264 gcctgcactggtctatcgttgcaaacagggcataccattccttgggcgtgtgaataggtc 323
           |||||| |||||||||||||||||||||| || ||||| ||| | |||||||||||||||
Sbjct: 629 gcctgctctggtctatcgttgcaaacaggacacaccatacctcgtgcgtgtgaataggtc 570

                                                                       
Query: 324 tttggtataccacattggaggcacattcttagaagctcggcagcatcttctggaccagga 383
           |||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 569 tttggtatactacattggaggcacattcttagaagatcagcagcatcttctggaccagga 510

                                                                   
Query: 384 tttgcagcgcctattttcctctttccatcaacagaacctggagggttgccaccatt 439
           ||||| || |||||| | |||||||| |||  |||| ||||||||||| |||||||
Sbjct: 509 tttgccgcacctattattctctttccttcagtagaaactggagggttggcaccatt 454



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 626 gcggcgatcgagcacgccgagcgcctccccgacctcctcgggct 669
           |||||| |||||||| |||||||||||| || ||||||||||||
Sbjct: 348 gcggcggtcgagcactccgagcgcctccacggcctcctcgggct 305



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                       
Query: 532 cactgctaactcgtccacggatggcaaccatctgtggtttcgccgccacaaccgcaccgg 591
           |||||||||||||| |||| || |||||||  || ||||| ||  ||||||| ||||| |
Sbjct: 448 cactgctaactcgttcacgaattgcaaccaattgaggttttgcgaccacaacggcaccag 389

                        
Query: 592 gaggtggcggctt 604
           |||| ||| ||||
Sbjct: 388 gaggcggctgctt 376

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  202 bits (102), Expect = 1e-48
 Identities = 182/209 (87%)
 Strand = Plus / Minus

                                                                            
Query: 144      tgttgccgcagngccatctcagtctcgctcttccacgatgcatgtgacgattgccctctc 203
                ||||||||||| ||||||||||| || ||||||||||| || ||||| |||||||| |||
Sbjct: 31693531 tgttgccgcagggccatctcagtttcactcttccacgaagcgtgtgatgattgccccctc 31693472

                                                                            
Query: 204      atcctcttcactttctccttgtccttgacagcagaacccttcttcttctcgggttctttt 263
                ||||| || |  ||||||||||| ||||| |  || || |||||||| || || ||| ||
Sbjct: 31693471 atccttttgatcttctccttgtctttgacggtcgatcctttcttcttttctggctctctt 31693412

                                                                            
Query: 264      gcctgcactggtctatcgttgcaaacagggcataccattccttgggcgtgtgaataggtc 323
                |||||| |||||||||||||||||||||| || ||||| ||| | |||||||||||||||
Sbjct: 31693411 gcctgctctggtctatcgttgcaaacaggacacaccatacctcgtgcgtgtgaataggtc 31693352

                                             
Query: 324      tttggtataccacattggaggcacattct 352
                |||||||||||||||||||||||||||||
Sbjct: 31693351 tttggtataccacattggaggcacattct 31693323



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                            
Query: 351      cttagaagctcggcagcatcttctggaccaggatttgcagcgcctattttcctctttcca 410
                |||||||| || |||||||||||||||||||||||||| || |||||| | |||||||| 
Sbjct: 31693210 cttagaagatcagcagcatcttctggaccaggatttgccgcacctattattctctttcct 31693151

                                             
Query: 411      tcaacagaacctggagggttgccaccatt 439
                |||  |||| ||||||||||| |||||||
Sbjct: 31693150 tcagtagaaactggagggttggcaccatt 31693122



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 626      gcggcgatcgagcacgccgagcgcctccccgacctcctcgggct 669
                |||||| |||||||| |||||||||||| || ||||||||||||
Sbjct: 31691999 gcggcggtcgagcactccgagcgcctccacggcctcctcgggct 31691956

---

>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1288_G09
          Length = 109672

 Score =  202 bits (102), Expect = 1e-48
 Identities = 182/209 (87%)
 Strand = Plus / Minus

                                                                         
Query: 144   tgttgccgcagngccatctcagtctcgctcttccacgatgcatgtgacgattgccctctc 203
             ||||||||||| ||||||||||| || ||||||||||| || ||||| |||||||| |||
Sbjct: 73318 tgttgccgcagggccatctcagtttcactcttccacgaagcgtgtgatgattgccccctc 73259

                                                                         
Query: 204   atcctcttcactttctccttgtccttgacagcagaacccttcttcttctcgggttctttt 263
             ||||| || |  ||||||||||| ||||| |  || || |||||||| || || ||| ||
Sbjct: 73258 atccttttgatcttctccttgtctttgacggtcgatcctttcttcttttctggctctctt 73199

                                                                         
Query: 264   gcctgcactggtctatcgttgcaaacagggcataccattccttgggcgtgtgaataggtc 323
             |||||| |||||||||||||||||||||| || ||||| ||| | |||||||||||||||
Sbjct: 73198 gcctgctctggtctatcgttgcaaacaggacacaccatacctcgtgcgtgtgaataggtc 73139

                                          
Query: 324   tttggtataccacattggaggcacattct 352
             |||||||||||||||||||||||||||||
Sbjct: 73138 tttggtataccacattggaggcacattct 73110



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                         
Query: 351   cttagaagctcggcagcatcttctggaccaggatttgcagcgcctattttcctctttcca 410
             |||||||| || |||||||||||||||||||||||||| || |||||| | |||||||| 
Sbjct: 72997 cttagaagatcagcagcatcttctggaccaggatttgccgcacctattattctctttcct 72938

                                          
Query: 411   tcaacagaacctggagggttgccaccatt 439
             |||  |||| ||||||||||| |||||||
Sbjct: 72937 tcagtagaaactggagggttggcaccatt 72909



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 626   gcggcgatcgagcacgccgagcgcctccccgacctcctcgggct 669
             |||||| |||||||| |||||||||||| || ||||||||||||
Sbjct: 71786 gcggcggtcgagcactccgagcgcctccacggcctcctcgggct 71743

---

>gb|AY111222.1| Zea mays CL30969_1 mRNA sequence
          Length = 953

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                       
Query: 312 tgtgaataggtctttggtataccacattggaggcacattcttagaagctcggcagcatct 371
           ||||||||||||||||||| ||||||||| || ||||| |||||||| || || || |||
Sbjct: 391 tgtgaataggtctttggtacaccacattgtagacacatccttagaagatcagctgcgtct 450

                                      
Query: 372 tctggaccaggatttgcagcgcctatt 398
           ||||| |||||||||||||| ||||||
Sbjct: 451 tctggcccaggatttgcagcacctatt 477



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 84/99 (84%)
 Strand = Plus / Plus

                                                                       
Query: 136 agtcgaactgttgccgcagngccatctcagtctcgctcttccacgatgcatgtgacgatt 195
           ||||||| |||||||| || |||||||| || || |||||||| ||||||||||||||||
Sbjct: 215 agtcgaattgttgccgaagagccatctcggtttcactcttccatgatgcatgtgacgatt 274

                                                  
Query: 196 gccctctcatcctcttcactttctccttgtccttgacag 234
           |     |||||||||| || ||||||||||| |||||||
Sbjct: 275 gnnnnntcatcctcttgaccttctccttgtctttgacag 313



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 549 cggatggcaaccatctgtggtttcgccgccacaaccgcaccgggagg 595
           ||||| ||||| ||||||||||| ||| ||||||| ||||| |||||
Sbjct: 550 cggatagcaactatctgtggttttgccaccacaacagcacctggagg 596

---

>gb|AY110363.1| Zea mays CL13131_1 mRNA sequence
          Length = 621

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                       
Query: 312 tgtgaataggtctttggtataccacattggaggcacattcttagaagctcggcagcatct 371
           ||||| ||||||||||||| |||||||||||| ||||| || ||||| || || ||||||
Sbjct: 418 tgtgagtaggtctttggtacaccacattggagacacatcctcagaagatcagctgcatct 477

                                                             
Query: 372 tctggaccaggatttgcagcgcctattttcctctttccatcaacagaacc 421
           ||||||||||||||||| || |||||| | |     ||||||||||||||
Sbjct: 478 tctggaccaggatttgcggcacctattattcnnnnnccatcaacagaacc 527



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 84/99 (84%)
 Strand = Plus / Plus

                                                                       
Query: 136 agtcgaactgttgccgcagngccatctcagtctcgctcttccacgatgcatgtgacgatt 195
           ||||||| ||||| || || |||||||| || ||||||||||| || ||||| |||||||
Sbjct: 242 agtcgaaatgttgtcgaagagccatctcggtttcgctcttccaggacgcatgcgacgatt 301

                                                  
Query: 196 gccctctcatcctcttcactttctccttgtccttgacag 234
           | || ||||||||||| |  ||||||||||| |||||||
Sbjct: 302 ggcccctcatcctcttgatcttctccttgtctttgacag 340

---

>emb|AJ635177.1| Mangifera indica microsatellite DNA, locus mMiCIR015
          Length = 490

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 288 acagggcataccattccttgggcgtgtgaataggtctttggtataccacattg 340
           ||||| || ||||||||| |||| | ||| |||||||||||||| ||||||||
Sbjct: 213 acaggacacaccattcctcgggcatttgagtaggtctttggtattccacattg 161

---

>gb|AC149131.3| Medicago truncatula chromosome 7 BAC clone mth2-19e15, complete
             sequence
          Length = 122492

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 393   cctattttcctctttccatcaacagaac 420
             ||||||||||||||| ||||||||||||
Sbjct: 76415 cctattttcctctttgcatcaacagaac 76388

---

>gb|AC149040.2| Medicago truncatula chromosome 7 BAC clone mth2-9f22, complete sequence
          Length = 120423

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 393   cctattttcctctttccatcaacagaac 420
             ||||||||||||||| ||||||||||||
Sbjct: 13619 cctattttcctctttgcatcaacagaac 13646

---

>gb|AC119415.13| Medicago truncatula clone mth2-27n2, complete sequence
          Length = 139330

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 394    ctattttcctctttccatcaacagaac 420
              |||||||||||||| ||||||||||||
Sbjct: 126937 ctattttcctctttgcatcaacagaac 126911

---

>gb|AC126789.20| Medicago truncatula clone mth2-36n23, complete sequence
          Length = 126875

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 394   ctattttcctctttccatcaacagaac 420
             |||||||||||||| ||||||||||||
Sbjct: 81096 ctattttcctctttgcatcaacagaac 81070

---

>gb|AC157375.2| Medicago truncatula chromosome 2 BAC clone mth2-55b12, complete
             sequence
          Length = 125311

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 394   ctattttcctctttccatcaacagaac 420
             |||||||||||||| ||||||||||||
Sbjct: 69052 ctattttcctctttgcatcaacagaac 69078

---

>gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, complete sequence
          Length = 253910

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 197    ccctctcatcctcttcactttctcct 222
              |||||||||||||||| |||||||||
Sbjct: 187541 ccctctcatcctcttctctttctcct 187516

---

>gb|AC024068.16| Mus musculus strain 129S6/SvEvTac clone rp22-86n23 map 1, complete
              sequence
          Length = 157066

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 205    tcctcttcactttctccttgtc 226
              ||||||||||||||||||||||
Sbjct: 143959 tcctcttcactttctccttgtc 143938

---

>gb|AC158577.5| Mus musculus chromosome 1, clone RP24-187D4, complete sequence
          Length = 155742

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 205    tcctcttcactttctccttgtc 226
              ||||||||||||||||||||||
Sbjct: 103287 tcctcttcactttctccttgtc 103308

---

>ref|NM_001014337.1| Danio rerio zgc:113176 (zgc:113176), mRNA
          Length = 2019

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 197  ccctctcatcctcttcactttc 218
            ||||||||||||||||||||||
Sbjct: 1645 ccctctcatcctcttcactttc 1666

---

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 633     tcgagcacgccgagcgcctccccgacctcc 662
               |||||||||||||||||||| || ||||||
Sbjct: 4418242 tcgagcacgccgagcgcctcgcccacctcc 4418213

---

>gb|BC091830.1| Danio rerio zgc:113176, mRNA (cDNA clone MGC:113176 IMAGE:7148213),
            complete cds
          Length = 2019

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 197  ccctctcatcctcttcactttc 218
            ||||||||||||||||||||||
Sbjct: 1645 ccctctcatcctcttcactttc 1666

---

>gb|AC115894.6| Mus musculus chromosome 18, clone RP24-443A14, complete sequence
          Length = 185242

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 197   ccctctcatcctcttcactttctcct 222
             |||||||||||||||| |||||||||
Sbjct: 49657 ccctctcatcctcttctctttctcct 49632

---

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 627     cggcgatcgagcacgccgagcgcct 651
               |||||||||||| ||||||||||||
Sbjct: 3712224 cggcgatcgagctcgccgagcgcct 3712248

---

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 629     gcgatcgagcacgccgagcgc 649
               |||||||||||||||||||||
Sbjct: 1121460 gcgatcgagcacgccgagcgc 1121480

---

>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13
          Length = 349563

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 627    cggcgatcgagcacgccgagcgcct 651
              |||||||||||| ||||||||||||
Sbjct: 246946 cggcgatcgagctcgccgagcgcct 246970

---

>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14
          Length = 308050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 627    cggcgatcgagcacgccgagcgcct 651
              |||||||||||| ||||||||||||
Sbjct: 228858 cggcgatcgagctcgccgagcgcct 228882

---

>dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4
          Length = 79046

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   ccttcttcttctcgggttctt 261
             |||||||||||||||||||||
Sbjct: 60398 ccttcttcttctcgggttctt 60378

---

>gb|AC164095.4| Mus musculus BAC clone RP23-355A22 from chromosome 7, complete sequence
          Length = 184356

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 365    agcatcttctggaccaggatttgc 388
              ||||||||||||||||| ||||||
Sbjct: 122532 agcatcttctggaccagtatttgc 122555

---

>gb|AE010424.1| Methanopyrus kandleri AV19 section 123 of 157 of the complete genome
          Length = 11138

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 643  cgagcgcctccccgacctcctcgg 666
            |||||||||||| |||||||||||
Sbjct: 4337 cgagcgcctcccggacctcctcgg 4314

---

>ref|XM_712021.1| Candida albicans SC5314 hypothetical protein (CaO19_5311), mRNA
          Length = 2529

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 200 tctcatcctcttcactttct 219
           ||||||||||||||||||||
Sbjct: 142 tctcatcctcttcactttct 123

---

>ref|XM_712020.1| Candida albicans SC5314 hypothetical protein (CaO19_5310), mRNA
          Length = 396

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tctcatcctcttcactttct 219
           ||||||||||||||||||||
Sbjct: 233 tctcatcctcttcactttct 252

---

>ref|XM_711942.1| Candida albicans SC5314 hypothetical protein (CaO19_12771), mRNA
          Length = 2529

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 200 tctcatcctcttcactttct 219
           ||||||||||||||||||||
Sbjct: 142 tctcatcctcttcactttct 123

---

>ref|XM_711941.1| Candida albicans SC5314 hypothetical protein (CaO19_12770), mRNA
          Length = 396

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tctcatcctcttcactttct 219
           ||||||||||||||||||||
Sbjct: 233 tctcatcctcttcactttct 252

---

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 616     tggagttggagcggcgatcg 635
               ||||||||||||||||||||
Sbjct: 1319078 tggagttggagcggcgatcg 1319059

---

>gb|AC161762.4| Mus musculus BAC clone RP23-371K18 from chromosome 7, complete sequence
          Length = 207870

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 365   agcatcttctggaccaggatttgc 388
             ||||||||||||||||| ||||||
Sbjct: 90371 agcatcttctggaccagtatttgc 90348

---

>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
             sequence
          Length = 131984

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     caaatacaagtaaacaaatc 25
             ||||||||||||||||||||
Sbjct: 71066 caaatacaagtaaacaaatc 71085

---

>emb|AL157384.8| Human DNA sequence from clone RP11-173G21 on chromosome 9q22.1-22.33
             Contains the KIAA0431 pseudogene, the 5' end of the FANCC
             gene for fanconi anemia complementation group C protein
             and a CpG island, complete sequence
          Length = 158143

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   actttctccttgtccttgac 232
             ||||||||||||||||||||
Sbjct: 53633 actttctccttgtccttgac 53652

---

>emb|AL049650.8|HSJ734P14 Human DNA sequence from clone RP4-734P14 on chromosome 20 Contains the
             3' end of the ZNF343 gene for zinc finger protein 343, the
             SNRPB gene for small nuclear ribonucleoprotein
             polypeptides B and B1 (B'), the 3' end of the TGM6 gene
             for transglutaminase 6 and a CpG island, complete sequence
          Length = 90220

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   ccctctcatcctcttcactt 216
             ||||||||||||||||||||
Sbjct: 35736 ccctctcatcctcttcactt 35717

---

>emb|BX119319.7| Zebrafish DNA sequence from clone CH211-195K14 in linkage group 5,
             complete sequence
          Length = 184366

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 403   tctttccatcaacagaacctggag 426
             |||||||||||||||||| |||||
Sbjct: 44713 tctttccatcaacagaacttggag 44690

---

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 630     cgatcgagcacgccgagcgc 649
               ||||||||||||||||||||
Sbjct: 1357841 cgatcgagcacgccgagcgc 1357860

---

>emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BAC clone T21L8
          Length = 87224

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aactgcaaatacaagtaaac 20
             ||||||||||||||||||||
Sbjct: 60886 aactgcaaatacaagtaaac 60867

---

>gb|AF486251.1| Erpobdellid sp. IRT-2002 myosin heavy chain type II mRNA, partial
           cds
          Length = 607

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 agcagaacccttcttcttct 252
           ||||||||||||||||||||
Sbjct: 471 agcagaacccttcttcttct 452

---

>gb|AC102264.26| Mus musculus chromosome 7, clone RP24-230F10, complete sequence
          Length = 175968

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 365    agcatcttctggaccaggatttgc 388
              ||||||||||||||||| ||||||
Sbjct: 120844 agcatcttctggaccagtatttgc 120821

---

>gb|DQ397629.1| Cenarchaeum symbiosum clone C01B12, complete sequence
          Length = 34772

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 631   gatcgagcacgccgagcgcc 650
             ||||||||||||||||||||
Sbjct: 12562 gatcgagcacgccgagcgcc 12581

---

>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 2       actgcaaatacaagtaaaca 21
               ||||||||||||||||||||
Sbjct: 3689579 actgcaaatacaagtaaaca 3689598

---

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   cagggcataccattccttgg 308
             ||||||||||||||||||||
Sbjct: 27676 cagggcataccattccttgg 27657

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 625   agcggcgatcgagcacgccg 644
             ||||||||||||||||||||
Sbjct: 95506 agcggcgatcgagcacgccg 95525

---

>gb|AC022274.5|AC022274 Homo sapiens BAC clone RP11-697M17 from 8, complete sequence
          Length = 190701

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 551    gatggcaaccatctgtggtt 570
              ||||||||||||||||||||
Sbjct: 148144 gatggcaaccatctgtggtt 148125

---

>emb|AL114629.1|CNS01BSD Botrytis cinerea strain T4 cDNA library
          Length = 780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 acccttcttcttctcgggtt 258
           ||||||||||||||||||||
Sbjct: 244 acccttcttcttctcgggtt 225

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 6        caaatacaagtaaacaaatc 25
                ||||||||||||||||||||
Sbjct: 18142062 caaatacaagtaaacaaatc 18142043

---

>gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete
             sequence
          Length = 101954

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aactgcaaatacaagtaaac 20
             ||||||||||||||||||||
Sbjct: 82909 aactgcaaatacaagtaaac 82928

---

>gb|AY220878.1| Homo sapiens Fanconi anemia, complementation group C (FANCC) gene,
             complete cds
          Length = 221989

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   actttctccttgtccttgac 232
             ||||||||||||||||||||
Sbjct: 41930 actttctccttgtccttgac 41949

---

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 633    tcgagcacgccgagcgcctc 652
              ||||||||||||||||||||
Sbjct: 155801 tcgagcacgccgagcgcctc 155820

---

>emb|BX323557.8| Zebrafish DNA sequence from clone DKEYP-86B9 in linkage group 5, complete
              sequence
          Length = 223754

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 403    tctttccatcaacagaacctggag 426
              |||||||||||||||||| |||||
Sbjct: 167656 tctttccatcaacagaacttggag 167633

---

>dbj|AK063103.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-C11, full
           insert sequence
          Length = 594

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   caaatacaagtaaacaaatc 25
           ||||||||||||||||||||
Sbjct: 560 caaatacaagtaaacaaatc 541

---

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 383     atttgcagcgcctattttcc 402
               ||||||||||||||||||||
Sbjct: 2373059 atttgcagcgcctattttcc 2373078

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 6        caaatacaagtaaacaaatc 25
                ||||||||||||||||||||
Sbjct: 18151315 caaatacaagtaaacaaatc 18151296

---

>emb|AL844852.11| Mouse DNA sequence from clone RP23-260N23 on chromosome 2, complete
              sequence
          Length = 257676

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 595    gtggcggctttctcctctgc 614
              ||||||||||||||||||||
Sbjct: 166385 gtggcggctttctcctctgc 166366


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,271,560
Number of Sequences: 3902068
Number of extensions: 6271560
Number of successful extensions: 102039
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101371
Number of HSP's gapped (non-prelim): 668
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---