ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1m01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473880.1| Oryza sativa (japonica cultivar-group), predic... 222 1e-54
2gb|AF251073.1|AF251073 Oryza sativa putative aminotransferase mR... 222 1e-54
3dbj|AK102306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
4dbj|AK061967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
5gb|AF297651.1| Oryza sativa putative aminotransferase mRNA, comp... 222 1e-54
6emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4,... 94 7e-16
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
8gb|BT018487.1| Zea mays clone EL01N0424F04.d mRNA sequence 88 4e-14
9ref|XM_463843.1| Oryza sativa (japonica cultivar-group), mRNA 78 4e-11
10gb|BT018495.1| Zea mays clone EL01N0426C11.d mRNA sequence 78 4e-11
11gb|BT017234.1| Zea mays clone EL01N0304E10.c mRNA sequence 78 4e-11
12gb|AF324485.1|AF324485 Oryza sativa aminotransferase-like protei... 78 4e-11
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
14dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
15ref|XM_473879.1| Oryza sativa (japonica cultivar-group), predic... 70 1e-08
16dbj|AK100259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 1e-08
17gb|AY105736.1| Zea mays PCO069643 mRNA sequence 70 1e-08
18ref|XM_480608.1| Oryza sativa (japonica cultivar-group), mRNA 64 6e-07
19dbj|AK103274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
21dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
22dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
23gb|AY864314.2| Bean common mosaic necrosis virus strain NL-3 K p... 42 2.2
24gb|AC105252.2| Homo sapiens BAC clone RP11-285A15 from 4, comple... 42 2.2
25gb|AC154471.2| Mus musculus BAC clone RP23-195D3 from chromosome... 42 2.2
26emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chro... 42 2.2
27gb|AC118018.20| Mus musculus chromosome 17, clone RP23-458D20, c... 40 8.7
28gb|AC147339.2| Pan troglodytes BAC clone CH251-65E18 from Y, com... 40 8.7
29emb|BX323879.11| Zebrafish DNA sequence from clone DKEY-30L21 in... 40 8.7
30emb|CR847802.11| Zebrafish DNA sequence from clone DKEY-48N1 in ... 40 8.7
31gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, compl... 40 8.7
32emb|AL391827.18| Human DNA sequence from clone RP11-63G20 on chr... 40 8.7
33emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chr... 40 8.7
34emb|AL357042.11| Human DNA sequence from clone RP11-85O2 on chro... 40 8.7
35emb|AL157821.14| Human DNA sequence from clone RP11-93M14 on chr... 40 8.7
36emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chr... 40 8.7
37gb|AC010196.5| Homo sapiens 12 BAC RP11-202H2 (Roswell Park Canc... 40 8.7
38emb|AL607107.8| Mouse DNA sequence from clone RP23-230C18 on chr... 40 8.7
39dbj|BS000651.1| Pan troglodytes chromosome Y clone: PTBY-012K02,... 40 8.7
40dbj|BS000559.1| Pan troglodytes chromosome Y clone:PTB-473B14, c... 40 8.7
41gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.7
42gb|AC023442.17| Homo sapiens chromosome 11, clone RP11-375D13, c... 40 8.7
43dbj|AK169879.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.7
44gb|AC022429.7| Homo sapiens chromosome 10 clone CTD-2374D18, com... 40 8.7
45emb|BX323450.8| Zebrafish DNA sequence from clone RP71-40N14 in ... 40 8.7
46gb|AF346455.1|F346434S22 Mus musculus latent transforming growth... 40 8.7
47gb|AC026269.26| Homo sapiens chromosome 11, clone RP11-745E9, co... 40 8.7
48emb|BX255889.7| Zebrafish DNA sequence from clone CH211-270O7 in... 40 8.7
49emb|BX323039.6| Zebrafish DNA sequence from clone CH211-145A11 i... 40 8.7
50gb|AC062031.7| Homo sapiens BAC clone RP11-474G7 from 2, complet... 40 8.7
51emb|CR626874.10| Zebrafish DNA sequence from clone CH211-219H2 i... 40 8.7
52gb|AC157803.6| Mus musculus chromosome 1, clone RP24-302H15, com... 40 8.7
53gb|AC102401.11| Mus musculus chromosome 1, clone RP24-257D18, co... 40 8.7
54gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, compl... 40 8.7 
>ref|XM_473880.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1551

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agctctgccactctcccctctgtggccttcatagcttctccatatatgctcacaagctca 408
            ||||| ||||| ||| |||| |||||||| |  || |||||||| |||||||| ||||| 
Sbjct: 1529 agctcagccaccctctcctcggtggccttgagtgcatctccatagatgctcaccagctcc 1470

                                                                        
Query: 409  tcaacttcgccaagggtcattgtcaatggtggtgacatcataatgctgtcgcccgcaacc 468
            || |||||  || |||||||| ||||||||||||||||||| ||| |||| || ||||| 
Sbjct: 1469 tcgacttcatcaggggtcattatcaatggtggtgacatcatgatgttgtctccagcaact 1410

                                                                        
Query: 469  ctaaccaacatgccacgcttctggcactcctgcccgaagatagcaccaacaccccattca 528
            ||||||| |||||| |||||||||||||||   || ||||| || || || |||||||||
Sbjct: 1409 ctaaccagcatgccgcgcttctggcactccgctccaaagatcgcgccgacgccccattca 1350

                                                                        
Query: 529  gcagggaatgggctatctcgtgatttgttgtcggcgaattcagttccaattatcaaccct 588
            |||||||||||   || | | ||||||||||| |||||||||||||||| ||||||||||
Sbjct: 1349 gcagggaatggatcatttggcgatttgttgtctgcgaattcagttccaagtatcaaccct 1290

                                                        
Query: 589  acaccacggatctccccaacaattgggcttcctgcaaaggcctt 632
            |||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 1289 acaccacgtatctctccaacaatcggacttcctgcaaaggcctt 1246
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>gb|AF251073.1|AF251073 Oryza sativa putative aminotransferase mRNA, partial cds
          Length = 799

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                       
Query: 349 agctctgccactctcccctctgtggccttcatagcttctccatatatgctcacaagctca 408
           ||||| ||||| ||| |||| |||||||| |  || |||||||| |||||||| ||||| 
Sbjct: 675 agctcagccaccctctcctcggtggccttgagtgcatctccatagatgctcaccagctcc 616

                                                                       
Query: 409 tcaacttcgccaagggtcattgtcaatggtggtgacatcataatgctgtcgcccgcaacc 468
           || |||||  || |||||||| ||||||||||||||||||| ||| |||| || ||||| 
Sbjct: 615 tcgacttcatcaggggtcattatcaatggtggtgacatcatgatgttgtctccagcaact 556

                                                                       
Query: 469 ctaaccaacatgccacgcttctggcactcctgcccgaagatagcaccaacaccccattca 528
           ||||||| |||||| |||||||||||||||   || ||||| || || || |||||||||
Sbjct: 555 ctaaccagcatgccgcgcttctggcactccgctccaaagatcgcgccgacgccccattca 496

                                                                       
Query: 529 gcagggaatgggctatctcgtgatttgttgtcggcgaattcagttccaattatcaaccct 588
           |||||||||||   || | | ||||||||||| |||||||||||||||| ||||||||||
Sbjct: 495 gcagggaatggatcatttggcgatttgttgtctgcgaattcagttccaagtatcaaccct 436

                                                       
Query: 589 acaccacggatctccccaacaattgggcttcctgcaaaggcctt 632
           |||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 435 acaccacgtatctctccaacaatcggacttcctgcaaaggcctt 392
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>dbj|AK102306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090A04, full
            insert sequence
          Length = 2070

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agctctgccactctcccctctgtggccttcatagcttctccatatatgctcacaagctca 408
            ||||| ||||| ||| |||| |||||||| |  || |||||||| |||||||| ||||| 
Sbjct: 1712 agctcagccaccctctcctcggtggccttgagtgcatctccatagatgctcaccagctcc 1653

                                                                        
Query: 409  tcaacttcgccaagggtcattgtcaatggtggtgacatcataatgctgtcgcccgcaacc 468
            || |||||  || |||||||| ||||||||||||||||||| ||| |||| || ||||| 
Sbjct: 1652 tcgacttcatcaggggtcattatcaatggtggtgacatcatgatgttgtctccagcaact 1593

                                                                        
Query: 469  ctaaccaacatgccacgcttctggcactcctgcccgaagatagcaccaacaccccattca 528
            ||||||| |||||| |||||||||||||||   || ||||| || || || |||||||||
Sbjct: 1592 ctaaccagcatgccgcgcttctggcactccgctccaaagatcgcgccgacgccccattca 1533

                                                                        
Query: 529  gcagggaatgggctatctcgtgatttgttgtcggcgaattcagttccaattatcaaccct 588
            |||||||||||   || | | ||||||||||| |||||||||||||||| ||||||||||
Sbjct: 1532 gcagggaatggatcatttggcgatttgttgtctgcgaattcagttccaagtatcaaccct 1473

                                                        
Query: 589  acaccacggatctccccaacaattgggcttcctgcaaaggcctt 632
            |||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 1472 acaccacgtatctctccaacaatcggacttcctgcaaaggcctt 1429
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>dbj|AK061967.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G12, full
            insert sequence
          Length = 1513

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agctctgccactctcccctctgtggccttcatagcttctccatatatgctcacaagctca 408
            ||||| ||||| ||| |||| |||||||| |  || |||||||| |||||||| ||||| 
Sbjct: 1129 agctcagccaccctctcctcggtggccttgagtgcatctccatagatgctcaccagctcc 1070

                                                                        
Query: 409  tcaacttcgccaagggtcattgtcaatggtggtgacatcataatgctgtcgcccgcaacc 468
            || |||||  || |||||||| ||||||||||||||||||| ||| |||| || ||||| 
Sbjct: 1069 tcgacttcatcaggggtcattatcaatggtggtgacatcatgatgttgtctccagcaact 1010

                                                                        
Query: 469  ctaaccaacatgccacgcttctggcactcctgcccgaagatagcaccaacaccccattca 528
            ||||||| |||||| |||||||||||||||   || ||||| || || || |||||||||
Sbjct: 1009 ctaaccagcatgccgcgcttctggcactccgctccaaagatcgcgccgacgccccattca 950

                                                                        
Query: 529  gcagggaatgggctatctcgtgatttgttgtcggcgaattcagttccaattatcaaccct 588
            |||||||||||   || | | ||||||||||| |||||||||||||||| ||||||||||
Sbjct: 949  gcagggaatggatcatttggcgatttgttgtctgcgaattcagttccaagtatcaaccct 890

                                                        
Query: 589  acaccacggatctccccaacaattgggcttcctgcaaaggcctt 632
            |||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 889  acaccacgtatctctccaacaatcggacttcctgcaaaggcctt 846
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>gb|AF297651.1| Oryza sativa putative aminotransferase mRNA, complete cds
          Length = 1993

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agctctgccactctcccctctgtggccttcatagcttctccatatatgctcacaagctca 408
            ||||| ||||| ||| |||| |||||||| |  || |||||||| |||||||| ||||| 
Sbjct: 1620 agctcagccaccctctcctcggtggccttgagtgcatctccatagatgctcaccagctcc 1561

                                                                        
Query: 409  tcaacttcgccaagggtcattgtcaatggtggtgacatcataatgctgtcgcccgcaacc 468
            || |||||  || |||||||| ||||||||||||||||||| ||| |||| || ||||| 
Sbjct: 1560 tcgacttcatcaggggtcattatcaatggtggtgacatcatgatgttgtctccagcaact 1501

                                                                        
Query: 469  ctaaccaacatgccacgcttctggcactcctgcccgaagatagcaccaacaccccattca 528
            ||||||| |||||| |||||||||||||||   || ||||| || || || |||||||||
Sbjct: 1500 ctaaccagcatgccgcgcttctggcactccgctccaaagatcgcgccgacgccccattca 1441

                                                                        
Query: 529  gcagggaatgggctatctcgtgatttgttgtcggcgaattcagttccaattatcaaccct 588
            |||||||||||   || | | ||||||||||| |||||||||||||||| ||||||||||
Sbjct: 1440 gcagggaatggatcatttggcgatttgttgtctgcgaattcagttccaagtatcaaccct 1381

                                                        
Query: 589  acaccacggatctccccaacaattgggcttcctgcaaaggcctt 632
            |||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 1380 acaccacgtatctctccaacaatcggacttcctgcaaaggcctt 1337
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>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17,
             complete sequence
          Length = 133279

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 519   accccattcagcagggaatgggctatctcgtgatttgttgtcggcgaattcagttccaat 578
             |||||||||||||||||||||   || | | ||||||||||| |||||||||||||||| 
Sbjct: 36794 accccattcagcagggaatggatcatttggcgatttgttgtctgcgaattcagttccaag 36735

                                    
Query: 579   tatcaaccctacaccacggatct 601
             |||||||||||||||||| ||||
Sbjct: 36734 tatcaaccctacaccacgtatct 36712



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 422   gggtcattgtcaatggtggtgacatcataatgctgtcgcccgcaaccctaaccaacatgc 481
             |||||||| ||||||||||||||||||| ||| |||| || ||||| ||||||| |||||
Sbjct: 37184 gggtcattatcaatggtggtgacatcatgatgttgtctccagcaactctaaccagcatgc 37125

                              
Query: 482   cacgcttctggcactcc 498
             | |||||||||||||||
Sbjct: 37124 cgcgcttctggcactcc 37108



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                         
Query: 334   tttttcttcgacttgagctctgccactctcccctctgtggccttcatagcttctccatat 393
             |||||||| ||| | ||||||||||||||  |||| |||||||||| |||||| || |||
Sbjct: 30101 tttttcttggacctcagctctgccactctttcctcggtggccttcaaagcttcaccgtat 30042

                          
Query: 394   atgctcacaagct 406
             |||||||| ||||
Sbjct: 30041 atgctcaccagct 30029



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 604   ccaacaattgggcttcctgcaaaggcctt 632
             |||||||| || |||||||||||||||||
Sbjct: 36617 ccaacaatcggacttcctgcaaaggcctt 36589
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                            
Query: 519      accccattcagcagggaatgggctatctcgtgatttgttgtcggcgaattcagttccaat 578
                |||||||||||||||||||||   || | | ||||||||||| |||||||||||||||| 
Sbjct: 31215193 accccattcagcagggaatggatcatttggcgatttgttgtctgcgaattcagttccaag 31215134

                                       
Query: 579      tatcaaccctacaccacggatct 601
                |||||||||||||||||| ||||
Sbjct: 31215133 tatcaaccctacaccacgtatct 31215111



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                            
Query: 422      gggtcattgtcaatggtggtgacatcataatgctgtcgcccgcaaccctaaccaacatgc 481
                |||||||| ||||||||||||||||||| ||| |||| || ||||| ||||||| |||||
Sbjct: 31215583 gggtcattatcaatggtggtgacatcatgatgttgtctccagcaactctaaccagcatgc 31215524

                                 
Query: 482      cacgcttctggcactcc 498
                | |||||||||||||||
Sbjct: 31215523 cgcgcttctggcactcc 31215507



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                            
Query: 334      tttttcttcgacttgagctctgccactctcccctctgtggccttcatagcttctccatat 393
                |||||||| ||| | ||||||||||||||  |||| |||||||||| |||||| || |||
Sbjct: 31208500 tttttcttggacctcagctctgccactctttcctcggtggccttcaaagcttcaccgtat 31208441

                             
Query: 394      atgctcacaagct 406
                |||||||| ||||
Sbjct: 31208440 atgctcaccagct 31208428



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 604      ccaacaattgggcttcctgcaaaggcctt 632
                |||||||| || |||||||||||||||||
Sbjct: 31215016 ccaacaatcggacttcctgcaaaggcctt 31214988
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>gb|BT018487.1| Zea mays clone EL01N0424F04.d mRNA sequence
          Length = 1851

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 134/164 (81%)
 Strand = Plus / Minus

                                                                        
Query: 442  gacatcataatgctgtcgcccgcaaccctaaccaacatgccacgcttctggcactcctgc 501
            |||||||| |||  |||||| |||||||| |||| |||||| ||||||||||||||||  
Sbjct: 1401 gacatcatgatggcgtcgccagcaaccctgaccagcatgccgcgcttctggcactcctct 1342

                                                                        
Query: 502  ccgaagatagcaccaacaccccattcagcagggaatgggctatctcgtgatttgttgtcg 561
            || ||||| |||||||| |||||||| ||||||||| |   |    |||||||||||| |
Sbjct: 1341 ccaaagatggcaccaaccccccattcggcagggaatagatcagtcggtgatttgttgttg 1282

                                                        
Query: 562  gcgaattcagttccaattatcaaccctacaccacggatctcccc 605
            | |||||| ||||| || |||| |||||  ||||| ||||||||
Sbjct: 1281 gtgaattcggttcccataatcatccctaagccacgtatctcccc 1238
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>ref|XM_463843.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1452

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agctctgccactctcccctctgtggccttcatagcttctccatatatgctcacaagctca 408
            ||||||||||||||  ||||||| ||||||| ||||||||||||||||||||| || | |
Sbjct: 1433 agctctgccactctttcctctgttgccttcagagcttctccatatatgctcaccagttta 1374

                                                   
Query: 409  tcaacttcgccaagggtcattgtcaatggtggtgacatc 447
            |||| |||  || |||| ||| ||| |||||| ||||||
Sbjct: 1373 tcaatttcttcacgggttattatcagtggtggggacatc 1335



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 137/171 (80%), Gaps = 3/171 (1%)
 Strand = Plus / Minus

                                                                        
Query: 465  aaccctaaccaacatgccacgcttctggcactcctgcccgaagatagcaccaacacccca 524
            |||| |||||| ||||||||| ||||  |||||||| || || ||  |||||||||||||
Sbjct: 1317 aaccttaaccatcatgccacgtttcttacactcctgtccaaatatttcaccaacacccca 1258

                                                                        
Query: 525  ttcagcagggaatgggctatctcgtgatttgttgtcggcgaattcagttccaattatcaa 584
             |||  |||||||     || | |||||||||| |||| ||| |||||| | || | |||
Sbjct: 1257 ctcaaaagggaataactcatatggtgatttgttatcggtgaactcagttgctatcagcaa 1198

                                                               
Query: 585  ccctacaccacggatctccccaacaattgggcttc---ctgcaaaggcctt 632
             |||||||||||  |||||||||||||||| ||||   |||||||||||||
Sbjct: 1197 tcctacaccacgtgtctccccaacaattggacttccagctgcaaaggcctt 1147
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>gb|BT018495.1| Zea mays clone EL01N0426C11.d mRNA sequence
          Length = 1897

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                        
Query: 442  gacatcataatgctgtcgcccgcaaccctaaccaacatgccacgcttctggcactcctgc 501
            |||||||| |||  |||||| || ||||| |||| |||||| |||||||||||||| |  
Sbjct: 1498 gacatcatgatggcgtcgccagcgaccctgaccagcatgccgcgcttctggcactcttcg 1439

                                               
Query: 502  ccgaagatagcaccaacaccccattcagcagggaa 536
            |||||||| |||||||| |||||||| ||||||||
Sbjct: 1438 ccgaagatggcaccaaccccccattcggcagggaa 1404
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>gb|BT017234.1| Zea mays clone EL01N0304E10.c mRNA sequence
          Length = 670

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                       
Query: 442 gacatcataatgctgtcgcccgcaaccctaaccaacatgccacgcttctggcactcctgc 501
           |||||||| |||  |||||| || ||||| |||| |||||| |||||||||||||| |  
Sbjct: 201 gacatcatgatggcgtcgccagcgaccctcaccagcatgccgcgcttctggcactcttcg 142

                                              
Query: 502 ccgaagatagcaccaacaccccattcagcagggaa 536
           |||||||| |||||||| |||||||| ||||||||
Sbjct: 141 ccgaagatggcaccaaccccccattcggcagggaa 107
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>gb|AF324485.1|AF324485 Oryza sativa aminotransferase-like protein mRNA, complete cds
          Length = 1632

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agctctgccactctcccctctgtggccttcatagcttctccatatatgctcacaagctca 408
            ||||||||||||||  ||||||| ||||||| ||||||||||||||||||||| || | |
Sbjct: 1453 agctctgccactctttcctctgttgccttcagagcttctccatatatgctcaccagttta 1394

                                                   
Query: 409  tcaacttcgccaagggtcattgtcaatggtggtgacatc 447
            |||| |||  || |||| ||| ||| |||||| ||||||
Sbjct: 1393 tcaatttcttcacgggttattatcagtggtggggacatc 1355



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 137/171 (80%), Gaps = 3/171 (1%)
 Strand = Plus / Minus

                                                                        
Query: 465  aaccctaaccaacatgccacgcttctggcactcctgcccgaagatagcaccaacacccca 524
            |||| |||||| ||||||||| ||||  |||||||| || || ||  |||||||||||||
Sbjct: 1337 aaccttaaccatcatgccacgtttcttacactcctgtccaaatatttcaccaacacccca 1278

                                                                        
Query: 525  ttcagcagggaatgggctatctcgtgatttgttgtcggcgaattcagttccaattatcaa 584
             |||  |||||||     || | |||||||||| |||| ||| |||||| | || | |||
Sbjct: 1277 ctcaaaagggaataactcatatggtgatttgttatcggtgaactcagttgctatcagcaa 1218

                                                               
Query: 585  ccctacaccacggatctccccaacaattgggcttc---ctgcaaaggcctt 632
             |||||||||||  |||||||||||||||| ||||   |||||||||||||
Sbjct: 1217 tcctacaccacgtgtctccccaacaattggacttccagctgcaaaggcctt 1167
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                        
Query: 349    agctctgccactctcccctctgtggccttcatagcttctccatatatgctcacaagct 406
              ||||||||||||||  ||||||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 679616 agctctgccactctttcctctgttgccttcagagcttctccatatatgctcaccagct 679673
to top
>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1399_H05
          Length = 147670

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                       
Query: 349   agctctgccactctcccctctgtggccttcatagcttctccatatatgctcacaagct 406
             ||||||||||||||  ||||||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 36511 agctctgccactctttcctctgttgccttcagagcttctccatatatgctcaccagct 36568
to top
>ref|XM_473879.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1494

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 334  tttttcttcgacttgagctctgccactctcccctctgtggccttcatagcttctccatat 393
            |||||||| ||| | ||||||||||||||  |||| |||||||||| |||||| || |||
Sbjct: 1490 tttttcttggacctcagctctgccactctttcctcggtggccttcaaagcttcaccgtat 1431

                                   
Query: 394  atgctcacaagctcatcaacttc 416
            |||||||| ||  ||||||||||
Sbjct: 1430 atgctcaccagtccatcaacttc 1408
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>dbj|AK100259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062G17, full
            insert sequence
          Length = 1906

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 334  tttttcttcgacttgagctctgccactctcccctctgtggccttcatagcttctccatat 393
            |||||||| ||| | ||||||||||||||  |||| |||||||||| |||||| || |||
Sbjct: 1756 tttttcttggacctcagctctgccactctttcctcggtggccttcaaagcttcaccgtat 1697

                                   
Query: 394  atgctcacaagctcatcaacttc 416
            |||||||| ||  ||||||||||
Sbjct: 1696 atgctcaccagtccatcaacttc 1674
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>gb|AY105736.1| Zea mays PCO069643 mRNA sequence
          Length = 2096

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 442  gacatcataatgctgtcgcccgcaaccctaaccaacatgccacgcttctggcactcctgc 501
            |||||||| |||  |||||| || ||||| |||| |||||| |||||||||||||| |  
Sbjct: 1659 gacatcatgatggcgtcgccagcgaccctcaccagcatgccgcgcttctggcactcttcg 1600

                                               
Query: 502  ccgaagatagcaccaacaccccattcagcagggaa 536
            |||||||| ||||| || |||||||| ||||||||
Sbjct: 1599 ccgaagatggcaccgaccccccattcggcagggaa 1565
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>ref|XM_480608.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1848

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 89/108 (82%)
 Strand = Plus / Minus

                                                                        
Query: 513  accaacaccccattcagcagggaatgggctatctcgtgatttgttgtcggcgaattcagt 572
            |||||||||||||||||||||||||||   ||   | || ||||||||| | ||||||||
Sbjct: 1454 accaacaccccattcagcagggaatggatcattcggagacttgttgtcgacaaattcagt 1395

                                                            
Query: 573  tccaattatcaaccctacaccacggatctccccaacaattgggcttcc 620
             |||| |||||  |||| |||||| ||||| || |||||||| |||||
Sbjct: 1394 cccaagtatcagtcctaaaccacgtatctcgcctacaattggacttcc 1347
to top
>dbj|AK103274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124J10, full
            insert sequence
          Length = 1848

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 89/108 (82%)
 Strand = Plus / Minus

                                                                        
Query: 513  accaacaccccattcagcagggaatgggctatctcgtgatttgttgtcggcgaattcagt 572
            |||||||||||||||||||||||||||   ||   | || ||||||||| | ||||||||
Sbjct: 1454 accaacaccccattcagcagggaatggatcattcggagacttgttgtcgacaaattcagt 1395

                                                            
Query: 573  tccaattatcaaccctacaccacggatctccccaacaattgggcttcc 620
             |||| |||||  |||| |||||| ||||| || |||||||| |||||
Sbjct: 1394 cccaagtatcagtcctaaaccacgtatctcgcctacaattggacttcc 1347
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 517     acaccccattcagcagggaatgg 539
               |||||||||||||||||||||||
Sbjct: 6164652 acaccccattcagcagggaatgg 6164674
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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_C05
          Length = 126112

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 517   acaccccattcagcagggaatgg 539
             |||||||||||||||||||||||
Sbjct: 28045 acaccccattcagcagggaatgg 28067
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>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0486F07
          Length = 154926

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 517    acaccccattcagcagggaatgg 539
              |||||||||||||||||||||||
Sbjct: 120669 acaccccattcagcagggaatgg 120691
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>gb|AY864314.2| Bean common mosaic necrosis virus strain NL-3 K polyprotein gene,
            complete cds
          Length = 9893

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 38   tcaaaatgtttcattctaaac 58
            |||||||||||||||||||||
Sbjct: 2918 tcaaaatgtttcattctaaac 2898
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>gb|AC105252.2| Homo sapiens BAC clone RP11-285A15 from 4, complete sequence
          Length = 194943

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 188   ctttggtgaaagaaatacttc 208
             |||||||||||||||||||||
Sbjct: 87648 ctttggtgaaagaaatacttc 87628
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>gb|AC154471.2| Mus musculus BAC clone RP23-195D3 from chromosome 14, complete sequence
          Length = 192057

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    gtggccttcatagcttctcca 390
              |||||||||||||||||||||
Sbjct: 155637 gtggccttcatagcttctcca 155657
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>emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chromosome 13, complete
              sequence
          Length = 206864

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 612    tgggcttcctgcaaaggcctt 632
              |||||||||||||||||||||
Sbjct: 118754 tgggcttcctgcaaaggcctt 118734
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>gb|AC118018.20| Mus musculus chromosome 17, clone RP23-458D20, complete sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     ttatttcaaaatgtttcatt 52
              ||||||||||||||||||||
Sbjct: 139160 ttatttcaaaatgtttcatt 139141
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>gb|AC147339.2| Pan troglodytes BAC clone CH251-65E18 from Y, complete sequence
          Length = 178935

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   ttatctatacatgcaagaat 141
             ||||||||||||||||||||
Sbjct: 25517 ttatctatacatgcaagaat 25498
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>emb|BX323879.11| Zebrafish DNA sequence from clone DKEY-30L21 in linkage group 10,
              complete sequence
          Length = 243476

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tacatgcaagaatggaccca 148
              ||||||||||||||||||||
Sbjct: 104924 tacatgcaagaatggaccca 104905
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>emb|CR847802.11| Zebrafish DNA sequence from clone DKEY-48N1 in linkage group 18,
            complete sequence
          Length = 172545

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 434  atggtggtgacatcataatgctgt 457
            |||||||||||| |||||||||||
Sbjct: 7509 atggtggtgacagcataatgctgt 7532
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>gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, complete sequence
          Length = 177899

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    attatttcaaaatgtttcattcta 55
             ||||||||||||| ||||||||||
Sbjct: 47979 attatttcaaaatatttcattcta 48002
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>emb|AL391827.18| Human DNA sequence from clone RP11-63G20 on chromosome 10 Contains the
             5' end of a novel gene (FLJ13114 FLJ40653) and two CpG
             islands, complete sequence
          Length = 183430

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   ttatttggcagattatctatacat 133
             |||||||||| |||||||||||||
Sbjct: 71327 ttatttggcatattatctatacat 71304
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>emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chromosome 13 Contains two
              CpG islands, complete sequence
          Length = 123887

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     aattatttcaaaatgtttca 50
              ||||||||||||||||||||
Sbjct: 110984 aattatttcaaaatgtttca 111003
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>emb|AL357042.11| Human DNA sequence from clone RP11-85O2 on chromosome 10, complete
             sequence
          Length = 115348

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 615   gcttcctgcaaaggccttca 634
             ||||||||||||||||||||
Sbjct: 75544 gcttcctgcaaaggccttca 75563
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>emb|AL157821.14| Human DNA sequence from clone RP11-93M14 on chromosome 13 Contains part
             of the GPC5 gene for glypican 5, complete sequence
          Length = 138781

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 27    gggnaattatttcaaaatgtttcattc 53
             ||| |||||||| ||||||||||||||
Sbjct: 80966 ggggaattattttaaaatgtttcattc 80992
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>emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chromosome 11p12-13,
             complete sequence
          Length = 106073

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   ccactctcccctctgtggcc 375
             ||||||||||||||||||||
Sbjct: 94849 ccactctcccctctgtggcc 94830
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>gb|AC010196.5| Homo sapiens 12 BAC RP11-202H2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163246

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     aattatttcaaaatgtttca 50
              ||||||||||||||||||||
Sbjct: 156965 aattatttcaaaatgtttca 156984
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>emb|AL607107.8| Mouse DNA sequence from clone RP23-230C18 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 125442

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   aatctatcttgtgtggaatc 168
             ||||||||||||||||||||
Sbjct: 14625 aatctatcttgtgtggaatc 14606
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>dbj|BS000651.1| Pan troglodytes chromosome Y clone: PTBY-012K02, complete sequence
          Length = 162358

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   ttatctatacatgcaagaat 141
             ||||||||||||||||||||
Sbjct: 25295 ttatctatacatgcaagaat 25276
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>dbj|BS000559.1| Pan troglodytes chromosome Y clone:PTB-473B14, complete sequences
          Length = 127252

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   ttatctatacatgcaagaat 141
             ||||||||||||||||||||
Sbjct: 15570 ttatctatacatgcaagaat 15551
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      ttatctatacatgcaagaat 141
                ||||||||||||||||||||
Sbjct: 16667397 ttatctatacatgcaagaat 16667416
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>gb|AC023442.17| Homo sapiens chromosome 11, clone RP11-375D13, complete sequence
          Length = 177644

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 31    aattatttcaaaatgtttcattct 54
             |||| |||||||||||||||||||
Sbjct: 36483 aattgtttcaaaatgtttcattct 36460
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>dbj|AK169879.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630002F13
           product:ATP-binding cassette, sub-family A (ABC1),
           member 5, full insert sequence
          Length = 2097

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 tattctgtacacatccgaga 300
           ||||||||||||||||||||
Sbjct: 168 tattctgtacacatccgaga 187
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>gb|AC022429.7| Homo sapiens chromosome 10 clone CTD-2374D18, complete sequence
          Length = 89582

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 615   gcttcctgcaaaggccttca 634
             ||||||||||||||||||||
Sbjct: 77384 gcttcctgcaaaggccttca 77403
to top
>emb|BX323450.8| Zebrafish DNA sequence from clone RP71-40N14 in linkage group 17,
              complete sequence
          Length = 178920

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 434    atggtggtgacatcataatgctgt 457
              ||||||||| ||||||||||||||
Sbjct: 157028 atggtggtggcatcataatgctgt 157005
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>gb|AF346455.1|F346434S22 Mus musculus latent transforming growth factor beta binding protein
           (Ltbp1) gene, exon 23
          Length = 866

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 33  ttatttcaaaatgtttcatt 52
           ||||||||||||||||||||
Sbjct: 407 ttatttcaaaatgtttcatt 426
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>gb|AC026269.26| Homo sapiens chromosome 11, clone RP11-745E9, complete sequence
          Length = 173145

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   ccactctcccctctgtggcc 375
             ||||||||||||||||||||
Sbjct: 31190 ccactctcccctctgtggcc 31171
to top
>emb|BX255889.7| Zebrafish DNA sequence from clone CH211-270O7 in linkage group 17,
             complete sequence
          Length = 162918

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 434   atggtggtgacatcataatgctgt 457
             ||||||||| ||||||||||||||
Sbjct: 59374 atggtggtggcatcataatgctgt 59351
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>emb|BX323039.6| Zebrafish DNA sequence from clone CH211-145A11 in linkage group 10,
              complete sequence
          Length = 150772

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tacatgcaagaatggaccca 148
              ||||||||||||||||||||
Sbjct: 136081 tacatgcaagaatggaccca 136100
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>gb|AC062031.7| Homo sapiens BAC clone RP11-474G7 from 2, complete sequence
          Length = 172792

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   ctctgccactctcccctctg 370
             ||||||||||||||||||||
Sbjct: 91573 ctctgccactctcccctctg 91554
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>emb|CR626874.10| Zebrafish DNA sequence from clone CH211-219H2 in linkage group 18,
             complete sequence
          Length = 214825

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 434   atggtggtgacatcataatgctgt 457
             |||||||||||| |||||||||||
Sbjct: 61998 atggtggtgacagcataatgctgt 61975
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>gb|AC157803.6| Mus musculus chromosome 1, clone RP24-302H15, complete sequence
          Length = 136168

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 566    attcagttccaattatcaac 585
              ||||||||||||||||||||
Sbjct: 132893 attcagttccaattatcaac 132874
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>gb|AC102401.11| Mus musculus chromosome 1, clone RP24-257D18, complete sequence
          Length = 166242

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   attcagttccaattatcaac 585
             ||||||||||||||||||||
Sbjct: 43281 attcagttccaattatcaac 43300
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>gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, complete sequence
          Length = 210784

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     attatttcaaaatgtttcattcta 55
              ||||||||||||| ||||||||||
Sbjct: 181135 attatttcaaaatatttcattcta 181158


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,930,888
Number of Sequences: 3902068
Number of extensions: 4930888
Number of successful extensions: 99123
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98868
Number of HSP's gapped (non-prelim): 248
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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