| Clone Name | rbags1l24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_471943.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 258 bits (130), Expect = 2e-65 Identities = 285/338 (84%) Strand = Plus / Minus Query: 225 taagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccacattt 284 |||||||||||||||||||||||||| |||||||| ||||||| ||||||||| | ||| Sbjct: 950 taagactcgagttcagccatttcctcaggtgtgagcttcacagatagtgctccaatgttt 891 Query: 285 tggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctggtgg 344 ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||| || Sbjct: 890 tggtttaaattctcgatttttgttgtcccaggtatggggcatacatcgcttccctgatga 831 Query: 345 tgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacgtca 404 || ||||| ||||| || || ||||| |||||||||||||| || | ||||| ||| | Sbjct: 830 tggacccaggccaatgcgagctgtgacggtgtgcatccttttctggctgccattgcgtta 771 Query: 405 acacgctcaaatatctgggcattcttctcgagactctctggttgaaatctangtaaatgc 464 |||||||||||||| | ||||||||||| ||| ||||| ||||||||||| | | |||| Sbjct: 770 acacgctcaaatatttcagcattcttctcaagattctcttgttgaaatctaggaatatgc 711 Query: 465 ttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaatcct 524 ||||| || |||||||||||||| || || || | ||| ||||| ||| ||||| ||| Sbjct: 710 ttgcgaaaatcctgatctgatagagactccactagtttagctccagcagaaaagaaccct 651 Query: 525 ntaccaagtgggctgtaagcaacaattncaattncaag 562 ||||||||||||| ||||| || ||| ||||| |||| Sbjct: 650 ctaccaagtgggctataagctactattccaattccaag 613 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcaga 163 |||| |||||||||||||||||| |||||||||||||| Sbjct: 1055 tactgagctttccaagatgacaagggaggggtctcaga 1018
>dbj|AK099774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095E15, full insert sequence Length = 1374 Score = 258 bits (130), Expect = 2e-65 Identities = 285/338 (84%) Strand = Plus / Minus Query: 225 taagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccacattt 284 |||||||||||||||||||||||||| |||||||| ||||||| ||||||||| | ||| Sbjct: 986 taagactcgagttcagccatttcctcaggtgtgagcttcacagatagtgctccaatgttt 927 Query: 285 tggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctggtgg 344 ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||| || Sbjct: 926 tggtttaaattctcgatttttgttgtcccaggtatggggcatacatcgcttccctgatga 867 Query: 345 tgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacgtca 404 || ||||| ||||| || || ||||| |||||||||||||| || | ||||| ||| | Sbjct: 866 tggacccaggccaatgcgagctgtgacggtgtgcatccttttctggctgccattgcgtta 807 Query: 405 acacgctcaaatatctgggcattcttctcgagactctctggttgaaatctangtaaatgc 464 |||||||||||||| | ||||||||||| ||| ||||| ||||||||||| | | |||| Sbjct: 806 acacgctcaaatatttcagcattcttctcaagattctcttgttgaaatctaggaatatgc 747 Query: 465 ttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaatcct 524 ||||| || |||||||||||||| || || || | ||| ||||| ||| ||||| ||| Sbjct: 746 ttgcgaaaatcctgatctgatagagactccactagtttagctccagcagaaaagaaccct 687 Query: 525 ntaccaagtgggctgtaagcaacaattncaattncaag 562 ||||||||||||| ||||| || ||| ||||| |||| Sbjct: 686 ctaccaagtgggctataagctactattccaattccaag 649 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcaga 163 |||| |||||||||||||||||| |||||||||||||| Sbjct: 1091 tactgagctttccaagatgacaagggaggggtctcaga 1054
>dbj|AK061686.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B01, full insert sequence Length = 1366 Score = 258 bits (130), Expect = 2e-65 Identities = 285/338 (84%) Strand = Plus / Minus Query: 225 taagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccacattt 284 |||||||||||||||||||||||||| |||||||| ||||||| ||||||||| | ||| Sbjct: 985 taagactcgagttcagccatttcctcaggtgtgagcttcacagatagtgctccaatgttt 926 Query: 285 tggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctggtgg 344 ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||| || Sbjct: 925 tggtttaaattctcgatttttgttgtcccaggtatggggcatacatcgcttccctgatga 866 Query: 345 tgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacgtca 404 || ||||| ||||| || || ||||| |||||||||||||| || | ||||| ||| | Sbjct: 865 tggacccaggccaatgcgagctgtgacggtgtgcatccttttctggctgccattgcgtta 806 Query: 405 acacgctcaaatatctgggcattcttctcgagactctctggttgaaatctangtaaatgc 464 |||||||||||||| | ||||||||||| ||| ||||| ||||||||||| | | |||| Sbjct: 805 acacgctcaaatatttcagcattcttctcaagattctcttgttgaaatctaggaatatgc 746 Query: 465 ttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaatcct 524 ||||| || |||||||||||||| || || || | ||| ||||| ||| ||||| ||| Sbjct: 745 ttgcgaaaatcctgatctgatagagactccactagtttagctccagcagaaaagaaccct 686 Query: 525 ntaccaagtgggctgtaagcaacaattncaattncaag 562 ||||||||||||| ||||| || ||| ||||| |||| Sbjct: 685 ctaccaagtgggctataagctactattccaattccaag 648 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcaga 163 |||| |||||||||||||||||| |||||||||||||| Sbjct: 1090 tactgagctttccaagatgacaagggaggggtctcaga 1053
>gb|AY107154.1| Zea mays PCO148860 mRNA sequence Length = 1102 Score = 234 bits (118), Expect = 3e-58 Identities = 357/438 (81%) Strand = Plus / Minus Query: 125 ctactcagctttccaagatgacaatggaggggtctcagactccttccaggtactaaccat 184 |||||||| ||||||||| |||||||| ||||||||||| ||||||||||| | |||| Sbjct: 778 ctactcagatttccaagaagacaatggcggggtctcagagtccttccaggtgttggccat 719 Query: 185 tggagggtacctgtcaccctgaacatcacctgcagcggcataagactcgagttcagccat 244 | |||| || | ||||||| | ||||||||||| ||| | ||||||||||| ||||| Sbjct: 718 ttgaggataacggtcacccaagatttcacctgcagcagcacaggactcgagttcggccat 659 Query: 245 ttcctctggtgtgagtttcacagctagtgctcccacattttggttgaaattttcgatttt 304 || |||||||| | ||||||| || || ||||| || |||||||| || |||||||| Sbjct: 658 ctcatctggtgtcaacttcacagaaagcgcccccacgttctggttgaagttctcgatttt 599 Query: 305 tgttgtgccaggtatggggcaaacatcgcttccctggtggtgaacccaagccaaggcaag 364 |||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||| || || Sbjct: 598 tgttgttccaggtatggggcaaacatcgtttccctgatggtgaacccatgccaatgctag 539 Query: 365 ttgtgatggtgtgcatcctttccttgtagccatcacgtcaacacgctcaaatatctgggc 424 |||||||||||||||||||| | | ||||| | | ||| |||| ||||||| || Sbjct: 538 ctgtgatggtgtgcatccttttttagctgccattgcattcacatgctcgaatatcttagc 479 Query: 425 attcttctcgagactctctggttgaaatctangtaaatgcttgcggaagtcctgatctga 484 |||||| | | | |||||||||||| |||| | | |||||||||||||||||| ||||| Sbjct: 478 attcttgacaatattctctggttgaagtctaggcatatgcttgcggaagtcctgctctga 419 Query: 485 tagtgagtcaaccaattttgctcctttagagaagaatcctntaccaagtgggctgtaagc 544 ||||||||||| | ||||||||| || | || || ||| | || ||||| |||||||| Sbjct: 418 cagtgagtcaactagttttgctccactacaaaaaaaccctctgcctagtggactgtaagc 359 Query: 545 aacaattncaattncaag 562 |||||| ||||| |||| Sbjct: 358 tacaattccaattccaag 341
>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19, complete sequence Length = 145383 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Minus Query: 225 taagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccacattt 284 |||||||||||||||||||||||||| |||||||| ||||||| ||||||||| | ||| Sbjct: 16214 taagactcgagttcagccatttcctcaggtgtgagcttcacagatagtgctccaatgttt 16155 Query: 285 tggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctggtgg 344 ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||| || Sbjct: 16154 tggtttaaattctcgatttttgttgtcccaggtatggggcatacatcgcttccctgatga 16095 Query: 345 tgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacgtca 404 || ||||| ||||| || || ||||| |||||||||||||| || | ||||| ||| | Sbjct: 16094 tggacccaggccaatgcgagctgtgacggtgtgcatccttttctggctgccattgcgtta 16035 Query: 405 acacgctcaaatatctgggcattcttctcgagactctctggttgaaatcta 455 |||||||||||||| | ||||||||||| ||| ||||| ||||||||||| Sbjct: 16034 acacgctcaaatatttcagcattcttctcaagattctcttgttgaaatcta 15984 Score = 188 bits (95), Expect = 1e-44 Identities = 200/235 (85%) Strand = Plus / Minus Query: 221 ggcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccac 280 |||||| ||||| ||||||| ||||||| | || ||||| ||||||| ||| ||| | || Sbjct: 25475 ggcataggactcaagttcagtcatttccccaggggtgagcttcacagatagagctgctac 25416 Query: 281 attttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctg 340 |||||| |||||||| |||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 25415 attttgattgaaattctcgatttttgttgtcccaggtatggggcatacgtcgcttccctg 25356 Query: 341 gtggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcac 400 || || ||||| ||||| || |||||||| |||||||||||||| || | ||||| | Sbjct: 25355 atgatggacccaggccaatgcgagttgtgacggtgtgcatccttttctggctgccattgc 25296 Query: 401 gtcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatcta 455 || ||||||||||||||| | ||||||||||||||| || |||||||||||||| Sbjct: 25295 gttaacacgctcaaatatttcagcattcttctcgagattcgctggttgaaatcta 25241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 ||||| ||||| ||||||| ||| || || |||||||| ||||| | |||||||||||| Sbjct: 102631 gcatacgactcaagttcagacatctcgtcaggtgtgagcttcactgacagtgctcccaca 102572 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 || |||| ||| || | ||| ||||| || || |||||||| || |||||||| || ||| Sbjct: 102571 ttctggtcgaagttgtggatctttgtggttcctggtatgggacagacatcgctcccttgg 102512 Query: 342 tggtgaacccaagcca 357 || |||||||| |||| Sbjct: 102511 tgatgaacccaggcca 102496 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcagactccttcca 172 ||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 25570 tactctgctttccaagacgacaatggaggggtctcagaatccttcca 25524 Score = 65.9 bits (33), Expect = 1e-07 Identities = 177/225 (78%) Strand = Plus / Minus Query: 133 ctttccaagatgacaatggaggggtctcagactccttccaggtactaaccattggagggt 192 ||||||| || ||||| |||||||||||| | ||||||||||| | |||| ||| || Sbjct: 9252 ctttccatgaggacaacggaggggtctcacaatccttccaggtgttggccatctgagcgt 9193 Query: 193 acctgtcaccctgaacatcacctgcagcggcataagactcgagttcagccatttcctctg 252 ||| |||||| || |||||| | ||||| || || || ||||| ||||||||||| || Sbjct: 9192 accagtcaccgtgcacatcagcagcagcagcgtaggattcgagctcagccatttcgtccc 9133 Query: 253 gtgtgagtttcacagctagtgctcccacattttggttgaaattttcgatttttgttgtgc 312 | ||||| | || | || || || ||||| |||| |||||| ||||| || || || | Sbjct: 9132 gagtgagctccagggacagagccccaacattctggtcgaaattctcgatcttcgtggtac 9073 Query: 313 caggtatggggcaaacatcgcttccctggtggtgaacccaagcca 357 | |||||||||||||||||| |||| |||||||| |||||||| Sbjct: 9072 cgggtatggggcaaacatcgtcccccttgtggtgaatccaagcca 9028 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcaga 163 |||| |||||||||||||||||| |||||||||||||| Sbjct: 16319 tactgagctttccaagatgacaagggaggggtctcaga 16282 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/47 (87%) Strand = Plus / Minus Query: 516 aagaatcctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||||| ||| ||||||||||||||||||| || ||| ||||| |||| Sbjct: 24955 aagaaccctctaccaagtgggctgtaagctactattccaattccaag 24909 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/99 (80%) Strand = Plus / Minus Query: 464 cttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaatcc 523 |||||| || |||||||||||||| || || || | ||| ||||| ||| ||||| || Sbjct: 15446 cttgcgaaaatcctgatctgatagagactccactagtttagctccagcagaaaagaaccc 15387 Query: 524 tntaccaagtgggctgtaagcaacaattncaattncaag 562 | ||||||||||||| ||||| || ||| ||||| |||| Sbjct: 15386 tctaccaagtgggctataagctactattccaattccaag 15348 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/41 (87%) Strand = Plus / Minus Query: 522 cctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||| ||||||||||||||||||| || ||| ||||| |||| Sbjct: 5772 cctctaccaagtgggctgtaagctactattccaattccaag 5732
>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08, complete sequence Length = 130521 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Minus Query: 225 taagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccacattt 284 |||||||||||||||||||||||||| |||||||| ||||||| ||||||||| | ||| Sbjct: 118566 taagactcgagttcagccatttcctcaggtgtgagcttcacagatagtgctccaatgttt 118507 Query: 285 tggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctggtgg 344 ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||| || Sbjct: 118506 tggtttaaattctcgatttttgttgtcccaggtatggggcatacatcgcttccctgatga 118447 Query: 345 tgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacgtca 404 || ||||| ||||| || || ||||| |||||||||||||| || | ||||| ||| | Sbjct: 118446 tggacccaggccaatgcgagctgtgacggtgtgcatccttttctggctgccattgcgtta 118387 Query: 405 acacgctcaaatatctgggcattcttctcgagactctctggttgaaatcta 455 |||||||||||||| | ||||||||||| ||| ||||| ||||||||||| Sbjct: 118386 acacgctcaaatatttcagcattcttctcaagattctcttgttgaaatcta 118336 Score = 188 bits (95), Expect = 1e-44 Identities = 200/235 (85%) Strand = Plus / Minus Query: 221 ggcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccac 280 |||||| ||||| ||||||| ||||||| | || ||||| ||||||| ||| ||| | || Sbjct: 127827 ggcataggactcaagttcagtcatttccccaggggtgagcttcacagatagagctgctac 127768 Query: 281 attttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctg 340 |||||| |||||||| |||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 127767 attttgattgaaattctcgatttttgttgtcccaggtatggggcatacgtcgcttccctg 127708 Query: 341 gtggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcac 400 || || ||||| ||||| || |||||||| |||||||||||||| || | ||||| | Sbjct: 127707 atgatggacccaggccaatgcgagttgtgacggtgtgcatccttttctggctgccattgc 127648 Query: 401 gtcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatcta 455 || ||||||||||||||| | ||||||||||||||| || |||||||||||||| Sbjct: 127647 gttaacacgctcaaatatttcagcattcttctcgagattcgctggttgaaatcta 127593 Score = 178 bits (90), Expect = 1e-41 Identities = 198/234 (84%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 |||||||||||||||||||||||||| | || ||||||||||||| ||||||| | ||| Sbjct: 93513 gcataagactcgagttcagccatttctgcaggggtgagtttcacagatagtgctgcaaca 93454 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 |||||||||||||| |||||||||||||| || ||||||||||| ||||| | ||||| Sbjct: 93453 ttttggttgaaattctcgatttttgttgtcccgggtatggggcacacatcacgcccctga 93394 Query: 342 tggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacg 401 || || | ||| ||||| || |||||||| |||||||||||||| || | ||||| || Sbjct: 93393 tgatggatccaggccaatgcgagttgtgacggtgtgcatccttttctggctgccatttcg 93334 Query: 402 tcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatcta 455 | ||||||||||||||| | ||||||||||||| | | |||||||||||||| Sbjct: 93333 ttaacacgctcaaatatttcagcattcttctcgatattacctggttgaaatcta 93280 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcagactccttcca 172 ||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 127922 tactctgctttccaagacgacaatggaggggtctcagaatccttcca 127876 Score = 65.9 bits (33), Expect = 1e-07 Identities = 177/225 (78%) Strand = Plus / Minus Query: 133 ctttccaagatgacaatggaggggtctcagactccttccaggtactaaccattggagggt 192 ||||||| || ||||| |||||||||||| | ||||||||||| | |||| ||| || Sbjct: 111604 ctttccatgaggacaacggaggggtctcacaatccttccaggtgttggccatctgagcgt 111545 Query: 193 acctgtcaccctgaacatcacctgcagcggcataagactcgagttcagccatttcctctg 252 ||| |||||| || |||||| | ||||| || || || ||||| ||||||||||| || Sbjct: 111544 accagtcaccgtgcacatcagcagcagcagcgtaggattcgagctcagccatttcgtccc 111485 Query: 253 gtgtgagtttcacagctagtgctcccacattttggttgaaattttcgatttttgttgtgc 312 | ||||| | || | || || || ||||| |||| |||||| ||||| || || || | Sbjct: 111484 gagtgagctccagggacagagccccaacattctggtcgaaattctcgatcttcgtggtac 111425 Query: 313 caggtatggggcaaacatcgcttccctggtggtgaacccaagcca 357 | |||||||||||||||||| |||| |||||||| |||||||| Sbjct: 111424 cgggtatggggcaaacatcgtcccccttgtggtgaatccaagcca 111380 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcaga 163 |||| |||||||||||||||||| |||||||||||||| Sbjct: 118671 tactgagctttccaagatgacaagggaggggtctcaga 118634 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/47 (87%) Strand = Plus / Minus Query: 516 aagaatcctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||||| ||| ||||||||||||||||||| || ||| ||||| |||| Sbjct: 127307 aagaaccctctaccaagtgggctgtaagctactattccaattccaag 127261 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/99 (80%) Strand = Plus / Minus Query: 464 cttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaatcc 523 |||||| || |||||||||||||| || || || | ||| ||||| ||| ||||| || Sbjct: 117798 cttgcgaaaatcctgatctgatagagactccactagtttagctccagcagaaaagaaccc 117739 Query: 524 tntaccaagtgggctgtaagcaacaattncaattncaag 562 | ||||||||||||| ||||| || ||| ||||| |||| Sbjct: 117738 tctaccaagtgggctataagctactattccaattccaag 117700 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/41 (87%) Strand = Plus / Minus Query: 522 cctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||| ||||||||||||||||||| || ||| ||||| |||| Sbjct: 108124 cctctaccaagtgggctgtaagctactattccaattccaag 108084 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 134 tttccaagatgacaatggaggggtctcagactcct 168 ||||||||| ||||| |||||||||||||| |||| Sbjct: 93601 tttccaagacgacaagggaggggtctcagagtcct 93567
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Minus Query: 225 taagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccacattt 284 |||||||||||||||||||||||||| |||||||| ||||||| ||||||||| | ||| Sbjct: 15932001 taagactcgagttcagccatttcctcaggtgtgagcttcacagatagtgctccaatgttt 15931942 Query: 285 tggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctggtgg 344 ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||| || Sbjct: 15931941 tggtttaaattctcgatttttgttgtcccaggtatggggcatacatcgcttccctgatga 15931882 Query: 345 tgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacgtca 404 || ||||| ||||| || || ||||| |||||||||||||| || | ||||| ||| | Sbjct: 15931881 tggacccaggccaatgcgagctgtgacggtgtgcatccttttctggctgccattgcgtta 15931822 Query: 405 acacgctcaaatatctgggcattcttctcgagactctctggttgaaatcta 455 |||||||||||||| | ||||||||||| ||| ||||| ||||||||||| Sbjct: 15931821 acacgctcaaatatttcagcattcttctcaagattctcttgttgaaatcta 15931771 Score = 188 bits (95), Expect = 1e-44 Identities = 200/235 (85%) Strand = Plus / Minus Query: 221 ggcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccac 280 |||||| ||||| ||||||| ||||||| | || ||||| ||||||| ||| ||| | || Sbjct: 15941262 ggcataggactcaagttcagtcatttccccaggggtgagcttcacagatagagctgctac 15941203 Query: 281 attttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctg 340 |||||| |||||||| |||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 15941202 attttgattgaaattctcgatttttgttgtcccaggtatggggcatacgtcgcttccctg 15941143 Query: 341 gtggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcac 400 || || ||||| ||||| || |||||||| |||||||||||||| || | ||||| | Sbjct: 15941142 atgatggacccaggccaatgcgagttgtgacggtgtgcatccttttctggctgccattgc 15941083 Query: 401 gtcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatcta 455 || ||||||||||||||| | ||||||||||||||| || |||||||||||||| Sbjct: 15941082 gttaacacgctcaaatatttcagcattcttctcgagattcgctggttgaaatcta 15941028 Score = 178 bits (90), Expect = 1e-41 Identities = 198/234 (84%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 |||||||||||||||||||||||||| | || ||||||||||||| ||||||| | ||| Sbjct: 15906948 gcataagactcgagttcagccatttctgcaggggtgagtttcacagatagtgctgcaaca 15906889 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 |||||||||||||| |||||||||||||| || ||||||||||| ||||| | ||||| Sbjct: 15906888 ttttggttgaaattctcgatttttgttgtcccgggtatggggcacacatcacgcccctga 15906829 Query: 342 tggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacg 401 || || | ||| ||||| || |||||||| |||||||||||||| || | ||||| || Sbjct: 15906828 tgatggatccaggccaatgcgagttgtgacggtgtgcatccttttctggctgccatttcg 15906769 Query: 402 tcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatcta 455 | ||||||||||||||| | ||||||||||||| | | |||||||||||||| Sbjct: 15906768 ttaacacgctcaaatatttcagcattcttctcgatattacctggttgaaatcta 15906715 Score = 71.9 bits (36), Expect = 2e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 ||||| ||||| ||||||| ||| || || |||||||| ||||| | |||||||||||| Sbjct: 16018418 gcatacgactcaagttcagacatctcgtcaggtgtgagcttcactgacagtgctcccaca 16018359 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 || |||| ||| || | ||| ||||| || || |||||||| || |||||||| || ||| Sbjct: 16018358 ttctggtcgaagttgtggatctttgtggttcctggtatgggacagacatcgctcccttgg 16018299 Query: 342 tggtgaacccaagcca 357 || |||||||| |||| Sbjct: 16018298 tgatgaacccaggcca 16018283 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcagactccttcca 172 ||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 15941357 tactctgctttccaagacgacaatggaggggtctcagaatccttcca 15941311 Score = 65.9 bits (33), Expect = 1e-07 Identities = 177/225 (78%) Strand = Plus / Minus Query: 133 ctttccaagatgacaatggaggggtctcagactccttccaggtactaaccattggagggt 192 ||||||| || ||||| |||||||||||| | ||||||||||| | |||| ||| || Sbjct: 15925039 ctttccatgaggacaacggaggggtctcacaatccttccaggtgttggccatctgagcgt 15924980 Query: 193 acctgtcaccctgaacatcacctgcagcggcataagactcgagttcagccatttcctctg 252 ||| |||||| || |||||| | ||||| || || || ||||| ||||||||||| || Sbjct: 15924979 accagtcaccgtgcacatcagcagcagcagcgtaggattcgagctcagccatttcgtccc 15924920 Query: 253 gtgtgagtttcacagctagtgctcccacattttggttgaaattttcgatttttgttgtgc 312 | ||||| | || | || || || ||||| |||| |||||| ||||| || || || | Sbjct: 15924919 gagtgagctccagggacagagccccaacattctggtcgaaattctcgatcttcgtggtac 15924860 Query: 313 caggtatggggcaaacatcgcttccctggtggtgaacccaagcca 357 | |||||||||||||||||| |||| |||||||| |||||||| Sbjct: 15924859 cgggtatggggcaaacatcgtcccccttgtggtgaatccaagcca 15924815 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcaga 163 |||| |||||||||||||||||| |||||||||||||| Sbjct: 15932106 tactgagctttccaagatgacaagggaggggtctcaga 15932069 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/47 (87%) Strand = Plus / Minus Query: 516 aagaatcctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||||| ||| ||||||||||||||||||| || ||| ||||| |||| Sbjct: 15940742 aagaaccctctaccaagtgggctgtaagctactattccaattccaag 15940696 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/99 (80%) Strand = Plus / Minus Query: 464 cttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaatcc 523 |||||| || |||||||||||||| || || || | ||| ||||| ||| ||||| || Sbjct: 15931233 cttgcgaaaatcctgatctgatagagactccactagtttagctccagcagaaaagaaccc 15931174 Query: 524 tntaccaagtgggctgtaagcaacaattncaattncaag 562 | ||||||||||||| ||||| || ||| ||||| |||| Sbjct: 15931173 tctaccaagtgggctataagctactattccaattccaag 15931135 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/41 (87%) Strand = Plus / Minus Query: 522 cctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||| ||||||||||||||||||| || ||| ||||| |||| Sbjct: 15921559 cctctaccaagtgggctgtaagctactattccaattccaag 15921519 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 134 tttccaagatgacaatggaggggtctcagactcct 168 ||||||||| ||||| |||||||||||||| |||| Sbjct: 15907036 tttccaagacgacaagggaggggtctcagagtcct 15907002
>dbj|AK105093.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-A01, full insert sequence Length = 1109 Score = 204 bits (103), Expect = 2e-49 Identities = 282/342 (82%), Gaps = 2/342 (0%) Strand = Plus / Minus Query: 221 ggcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccac 280 |||||| ||||| ||||||| ||||||| | || ||||| ||||||| ||| ||| | || Sbjct: 775 ggcataggactcaagttcagtcatttccccaggggtgagcttcacagatagagctgctac 716 Query: 281 attttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctg 340 |||||| |||||||| |||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 715 attttgattgaaattctcgatttttgttgtcccaggtatggggcatacgtcgcttccctg 656 Query: 341 gtggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcac 400 || || ||||| ||||| || |||||||| |||||||||||||| || | ||||| | Sbjct: 655 atgatggacccaggccaatgcgagttgtgacggtgtgcatccttttctggctgccattgc 596 Query: 401 gtcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatctangtaa 460 || ||||||||||||||| | ||||||||||||||| || |||||||||||||| | | Sbjct: 595 gttaacacgctcaaatatttcagcattcttctcgagattcgctggttgaaatctaggaag 536 Query: 461 atgcttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaa 520 ||||||||| | |||||| | |||| || || || | ||| ||||| ||| ||||| Sbjct: 535 atgcttgcgaacatcctgaacagata--gactccactagtttagctccaccagaaaagaa 478 Query: 521 tcctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||| ||||||||||||||||||| || ||| ||||| |||| Sbjct: 477 ccctctaccaagtgggctgtaagctactattccaattccaag 436 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 126 tactcagctttccaagatgacaatggaggggtctcagactccttcca 172 ||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 870 tactctgctttccaagacgacaatggaggggtctcagaatccttcca 824
>ref|XM_471940.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1038 Score = 192 bits (97), Expect = 9e-46 Identities = 279/341 (81%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 |||||||||||||||||||||||||| | || ||||||||||||| ||||||| | ||| Sbjct: 941 gcataagactcgagttcagccatttctgcaggggtgagtttcacagatagtgctgcaaca 882 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 |||||||||||||| |||||||||||||| || ||||||||||| ||||| | ||||| Sbjct: 881 ttttggttgaaattctcgatttttgttgtcccgggtatggggcacacatcacgcccctga 822 Query: 342 tggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacg 401 || || | ||| ||||| || |||||||| |||||||||||||| || | ||||| || Sbjct: 821 tgatggatccaggccaatgcgagttgtgacggtgtgcatccttttctggctgccatttcg 762 Query: 402 tcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatctangtaaa 461 | ||||||||||||||| | ||||||||||||| | | |||||||||||||| | | | Sbjct: 761 ttaacacgctcaaatatttcagcattcttctcgatattacctggttgaaatctagggata 702 Query: 462 tgcttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaat 521 ||||||| || || || |||| ||| || || || | ||| ||||| |||| || || Sbjct: 701 agcttgcgaaaatcatggtctggtagagaatccactagtttagctccactagaaaaaaac 642 Query: 522 cctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||| |||||||||| |||||||| || ||| ||||| |||| Sbjct: 641 cctttaccaagtggactgtaagctactattccaattccaag 601 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 134 tttccaagatgacaatggaggggtctcagactcct 168 ||||||||| ||||| |||||||||||||| |||| Sbjct: 1029 tttccaagacgacaagggaggggtctcagagtcct 995
>dbj|AK104524.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G01, full insert sequence Length = 1407 Score = 192 bits (97), Expect = 9e-46 Identities = 279/341 (81%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 |||||||||||||||||||||||||| | || ||||||||||||| ||||||| | ||| Sbjct: 995 gcataagactcgagttcagccatttctgcaggggtgagtttcacagatagtgctgcaaca 936 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 |||||||||||||| |||||||||||||| || ||||||||||| ||||| | ||||| Sbjct: 935 ttttggttgaaattctcgatttttgttgtcccgggtatggggcacacatcacgcccctga 876 Query: 342 tggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacg 401 || || | ||| ||||| || |||||||| |||||||||||||| || | ||||| || Sbjct: 875 tgatggatccaggccaatgcgagttgtgacggtgtgcatccttttctggctgccatttcg 816 Query: 402 tcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatctangtaaa 461 | ||||||||||||||| | ||||||||||||| | | |||||||||||||| | | | Sbjct: 815 ttaacacgctcaaatatttcagcattcttctcgatattacctggttgaaatctagggata 756 Query: 462 tgcttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaat 521 ||||||| || || || |||| ||| || || || | ||| ||||| |||| || || Sbjct: 755 agcttgcgaaaatcatggtctggtagagaatccactagtttagctccactagaaaaaaac 696 Query: 522 cctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||| |||||||||| |||||||| || ||| ||||| |||| Sbjct: 695 cctttaccaagtggactgtaagctactattccaattccaag 655 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 134 tttccaagatgacaatggaggggtctcagactcct 168 ||||||||| ||||| |||||||||||||| |||| Sbjct: 1083 tttccaagacgacaagggaggggtctcagagtcct 1049
>dbj|AK061807.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A04, full insert sequence Length = 1106 Score = 192 bits (97), Expect = 9e-46 Identities = 279/341 (81%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 |||||||||||||||||||||||||| | || ||||||||||||| ||||||| | ||| Sbjct: 681 gcataagactcgagttcagccatttctgcaggggtgagtttcacagatagtgctgcaaca 622 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 |||||||||||||| |||||||||||||| || ||||||||||| ||||| | ||||| Sbjct: 621 ttttggttgaaattctcgatttttgttgtcccgggtatggggcacacatcacgcccctga 562 Query: 342 tggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacg 401 || || | ||| ||||| || |||||||| |||||||||||||| || | ||||| || Sbjct: 561 tgatggatccaggccaatgcgagttgtgacggtgtgcatccttttctggctgccatttcg 502 Query: 402 tcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatctangtaaa 461 | ||||||||||||||| | ||||||||||||| | | |||||||||||||| | | | Sbjct: 501 ttaacacgctcaaatatttcagcattcttctcgatattacctggttgaaatctagggata 442 Query: 462 tgcttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaat 521 ||||||| || || || |||| ||| || || || | ||| ||||| |||| || || Sbjct: 441 agcttgcgaaaatcatggtctggtagagaatccactagtttagctccactagaaaaaaac 382 Query: 522 cctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||| |||||||||| |||||||| || ||| ||||| |||| Sbjct: 381 cctttaccaagtggactgtaagctactattccaattccaag 341 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 134 tttccaagatgacaatggaggggtctcagactcct 168 ||||||||| ||||| |||||||||||||| |||| Sbjct: 769 tttccaagacgacaagggaggggtctcagagtcct 735
>dbj|AK068652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160A22, full insert sequence Length = 1448 Score = 176 bits (89), Expect = 5e-41 Identities = 277/341 (81%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 |||||||||||||||||||||||||| | || ||||||||||||| ||||||| | ||| Sbjct: 996 gcataagactcgagttcagccatttctgcaggggtgagtttcacagatagtgctgcaaca 937 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 |||||||||||||| ||||||||||||| || ||||||||||| ||||| | ||||| Sbjct: 936 ttttggttgaaattcccgatttttgttgtcccgggtatggggcacacatcacgcccctga 877 Query: 342 tggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttccttgtagccatcacg 401 || || | ||| ||||| || |||||||| |||||||| ||||| || | ||||| || Sbjct: 876 tgatggatccaggccaatgcgagttgtgacggtgtgcacccttttctggctgccatttcg 817 Query: 402 tcaacacgctcaaatatctgggcattcttctcgagactctctggttgaaatctangtaaa 461 | ||||||||||||||| | ||||||||||||| | | |||||||||||||| | | | Sbjct: 816 ttaacacgctcaaatatttcagcattcttctcgatattacctggttgaaatctagggata 757 Query: 462 tgcttgcggaagtcctgatctgatagtgagtcaaccaattttgctcctttagagaagaat 521 ||||||| || || || |||| ||| || || || | ||| ||||| |||| || || Sbjct: 756 agcttgcgaaaatcatggtctggtagagaatccactagtttagctccactagaaaaaaac 697 Query: 522 cctntaccaagtgggctgtaagcaacaattncaattncaag 562 ||| |||||||||| |||||||| || ||| ||||| |||| Sbjct: 696 cctttaccaagtggactgtaagctactattccaattccaag 656 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 134 tttccaagatgacaatggaggggtctcagactcct 168 ||||||||| ||||| |||||||||||||| |||| Sbjct: 1084 tttccaagacgacaagggaggggtctcagagtcct 1050
>ref|XM_471950.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1068 Score = 71.9 bits (36), Expect = 2e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 ||||| ||||| ||||||| ||| || || |||||||| ||||| | |||||||||||| Sbjct: 965 gcatacgactcaagttcagacatctcgtcaggtgtgagcttcactgacagtgctcccaca 906 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 || |||| ||| || | ||| ||||| || || |||||||| || |||||||| || ||| Sbjct: 905 ttctggtcgaagttgtggatctttgtggttcctggtatgggacagacatcgctcccttgg 846 Query: 342 tggtgaacccaagcca 357 || |||||||| |||| Sbjct: 845 tgatgaacccaggcca 830
>dbj|AK103553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F18, full insert sequence Length = 1236 Score = 71.9 bits (36), Expect = 2e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 222 gcataagactcgagttcagccatttcctctggtgtgagtttcacagctagtgctcccaca 281 ||||| ||||| ||||||| ||| || || |||||||| ||||| | |||||||||||| Sbjct: 1017 gcatacgactcaagttcagacatctcgtcaggtgtgagcttcactgacagtgctcccaca 958 Query: 282 ttttggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctgg 341 || |||| ||| || | ||| ||||| || || |||||||| || |||||||| || ||| Sbjct: 957 ttctggtcgaagttgtggatctttgtggttcctggtatgggacagacatcgctcccttgg 898 Query: 342 tggtgaacccaagcca 357 || |||||||| |||| Sbjct: 897 tgatgaacccaggcca 882
>ref|XM_471942.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 65.9 bits (33), Expect = 1e-07 Identities = 177/225 (78%) Strand = Plus / Minus Query: 133 ctttccaagatgacaatggaggggtctcagactccttccaggtactaaccattggagggt 192 ||||||| || ||||| |||||||||||| | ||||||||||| | |||| ||| || Sbjct: 1099 ctttccatgaggacaacggaggggtctcacaatccttccaggtgttggccatctgagcgt 1040 Query: 193 acctgtcaccctgaacatcacctgcagcggcataagactcgagttcagccatttcctctg 252 ||| |||||| || |||||| | ||||| || || || ||||| ||||||||||| || Sbjct: 1039 accagtcaccgtgcacatcagcagcagcagcgtaggattcgagctcagccatttcgtccc 980 Query: 253 gtgtgagtttcacagctagtgctcccacattttggttgaaattttcgatttttgttgtgc 312 | ||||| | || | || || || ||||| |||| |||||| ||||| || || || | Sbjct: 979 gagtgagctccagggacagagccccaacattctggtcgaaattctcgatcttcgtggtac 920 Query: 313 caggtatggggcaaacatcgcttccctggtggtgaacccaagcca 357 | |||||||||||||||||| |||| |||||||| |||||||| Sbjct: 919 cgggtatggggcaaacatcgtcccccttgtggtgaatccaagcca 875
>gb|AY973615.1| Manihot esculenta aldo/keto reductase AKR mRNA, complete cds Length = 1267 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 237 tcagccatttcctctggtgtgagtttcacagctagtgctcccacattttggttgaaattt 296 |||||||| || ||||||||||||||||||| || ||||| | ||| |||||||||||| Sbjct: 984 tcagccatgtcttctggtgtgagtttcacagacagagctccaatattctggttgaaattt 925 Query: 297 tcgatttttgttgtgccaggtatggggcaaacatc 331 || || || || || ||||| ||||| || ||||| Sbjct: 924 tctatcttggtggttccaggaatgggacatacatc 890
>ref|NM_104751.3| Arabidopsis thaliana aldo-keto reductase/ oxidoreductase AT1G60680 mRNA, complete cds Length = 1767 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 |||||||||||||| ||||||||| |||||||| || ||||| ||||||| ||| ||| Sbjct: 860 atggggcaaacatcatctccctggtgatgaacccatgctaaggctagttgtgctggagtg 801 Query: 378 catcctttc 386 || |||||| Sbjct: 800 caccctttc 792
>gb|BT006462.1| Arabidopsis thaliana At1g60680 gene, complete cds Length = 1041 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 |||||||||||||| ||||||||| |||||||| || ||||| ||||||| ||| ||| Sbjct: 848 atggggcaaacatcatctccctggtgatgaacccatgctaaggctagttgtgctggagtg 789 Query: 378 catcctttc 386 || |||||| Sbjct: 788 caccctttc 780
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence Length = 120787 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 |||||||||||||| ||||||||| |||||||| || ||||| ||||||| ||| ||| Sbjct: 72007 atggggcaaacatcatctccctggtgatgaacccatgctaaggctagttgtgctggagtg 72066 Query: 378 catcctttc 386 || |||||| Sbjct: 72067 caccctttc 72075 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 |||||||||||||| ||||||||| |||||||| || | ||| ||||||| || ||| Sbjct: 82510 atggggcaaacatcatctccctggtgatgaacccatgcaagggctagttgtgcaggagtg 82569 Query: 378 catcctttc 386 ||||||||| Sbjct: 82570 catcctttc 82578 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 ||||| |||||||| ||||||||||||||||||||| | ||| ||||||| || ||| Sbjct: 74075 atgggacaaacatcatctccctggtggtgaacccaagcgagggctagttgtgcgggagtg 74134 Query: 378 catcctttc 386 || |||||| Sbjct: 74135 caccctttc 74143 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 132 gctttccaagatgacaatggaggggtctcaga 163 ||||||||||| |||||||| || |||||||| Sbjct: 82324 gctttccaagaagacaatggtggagtctcaga 82355
>gb|AF030301.1|AF030301 Helianthus annuus auxin-induced protein (HaAC1) mRNA, complete cds Length = 1218 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 334 ttccctggtggtgaacccaagccaaggcaagttgtgatggtgtgca 379 ||||||||||||||||||| ||||| || |||||||| | |||||| Sbjct: 831 ttccctggtggtgaacccaggccaatgctagttgtgaagttgtgca 786
>ref|NM_104752.1| Arabidopsis thaliana aldo-keto reductase/ oxidoreductase AT1G60690 mRNA, complete cds Length = 1038 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 ||||| |||||||| ||||||||||||||||||||| | ||| ||||||| || ||| Sbjct: 845 atgggacaaacatcatctccctggtggtgaacccaagcgagggctagttgtgcgggagtg 786 Query: 378 catcctttc 386 || |||||| Sbjct: 785 caccctttc 777
>ref|NM_104756.2| Arabidopsis thaliana aldo-keto reductase/ oxidoreductase AT1G60730 transcript variant AT1G60730.1 mRNA, complete cds Length = 1397 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 |||||||||||||| ||||||||| |||||||| || | ||| ||||||| || ||| Sbjct: 912 atggggcaaacatcatctccctggtgatgaacccatgcaagggctagttgtgcaggagtg 853 Query: 378 catcctttc 386 ||||||||| Sbjct: 852 catcctttc 844 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 132 gctttccaagatgacaatggaggggtctcaga 163 ||||||||||| |||||||| || |||||||| Sbjct: 1098 gctttccaagaagacaatggtggagtctcaga 1067
>ref|NM_202327.1| Arabidopsis thaliana aldo-keto reductase/ oxidoreductase AT1G60730 transcript variant AT1G60730.2 mRNA, complete cds Length = 1401 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 |||||||||||||| ||||||||| |||||||| || | ||| ||||||| || ||| Sbjct: 916 atggggcaaacatcatctccctggtgatgaacccatgcaagggctagttgtgcaggagtg 857 Query: 378 catcctttc 386 ||||||||| Sbjct: 856 catcctttc 848 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 132 gctttccaagatgacaatggaggggtctcaga 163 ||||||||||| |||||||| || |||||||| Sbjct: 1102 gctttccaagaagacaatggtggagtctcaga 1071
>gb|AY124862.1| Arabidopsis thaliana At1g60730/F8A5_24 mRNA, complete cds Length = 1038 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 |||||||||||||| ||||||||| |||||||| || | ||| ||||||| || ||| Sbjct: 845 atggggcaaacatcatctccctggtgatgaacccatgcaagggctagttgtgcaggagtg 786 Query: 378 catcctttc 386 ||||||||| Sbjct: 785 catcctttc 777 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 132 gctttccaagatgacaatggaggggtctcaga 163 ||||||||||| |||||||| || |||||||| Sbjct: 1031 gctttccaagaagacaatggtggagtctcaga 1000
>gb|AF361576.1| Arabidopsis thaliana At1g60730/F8A5_24 mRNA, complete cds Length = 1349 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 |||||||||||||| ||||||||| |||||||| || | ||| ||||||| || ||| Sbjct: 891 atggggcaaacatcatctccctggtgatgaacccatgcaagggctagttgtgcaggagtg 832 Query: 378 catcctttc 386 ||||||||| Sbjct: 831 catcctttc 823 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 132 gctttccaagatgacaatggaggggtctcaga 163 ||||||||||| |||||||| || |||||||| Sbjct: 1077 gctttccaagaagacaatggtggagtctcaga 1046
>emb|BX815445.1|CNS0ACYE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1295 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 318 atggggcaaacatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtg 377 |||||||||||||| ||||||||| |||||||| || | ||| ||||||| || ||| Sbjct: 865 atggggcaaacatcatctccctggtgatgaacccatgcaagggctagttgtgcaggagtg 806 Query: 378 catcctttc 386 ||||||||| Sbjct: 805 catcctttc 797 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 132 gctttccaagatgacaatggaggggtctcaga 163 ||||||||||| |||||||| || |||||||| Sbjct: 1051 gctttccaagaagacaatggtggagtctcaga 1020
>gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosome 19, complete sequence Length = 175604 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 gaacccaagccaaggcaagttgtgatggtgtgca 379 ||||||| || ||||| ||||||||||||||||| Sbjct: 52521 gaacccaggcaaaggccagttgtgatggtgtgca 52488
>gb|AC018465.8| Homo sapiens BAC clone RP11-350D5 from 2, complete sequence Length = 167073 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 tttggttgaaattttcgatttttgtt 308 |||| ||||||||||||||||||||| Sbjct: 42954 tttgattgaaattttcgatttttgtt 42929
>emb|AJ539062.1|NTA539062 Nicotiana tabacum cDNA-AFLP-fragment BT4-M43-033 Length = 153 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 285 tggttgaaattttcgatttttgttgtgccaggtatggggcaaacatcgcttccctggtgg 344 ||||||| |||||||| || || || || || |||||||| ||||| |||| |||| Sbjct: 20 tggttgaggttttcgatcttagtggtacctgggatggggcacacatcatttccttggtta 79 Query: 345 tgaacccaagccaaggcaagttgtgatggtgtgcatcc 382 || |||||||||||||| ||||| ||||| || ||||| Sbjct: 80 tgtacccaagccaaggctagttgagatggcgtacatcc 117
>emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 in linkage group 3, complete sequence Length = 159132 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttcagccatttcctctggtgtg 257 |||||||||||||||||||||| Sbjct: 42768 ttcagccatttcctctggtgtg 42789
>gb|DQ160009.1| Taraxacum officinale TO3-34 (To3-34) mRNA, partial cds Length = 332 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 334 ttccctggtggtgaacccaagccaa 358 ||||||||||||||||||| ||||| Sbjct: 260 ttccctggtggtgaacccacgccaa 236
>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3, complete sequence Length = 114380 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 attttggttgaaattttcgattttt 305 |||||||||||||||||||| |||| Sbjct: 32756 attttggttgaaattttcgaatttt 32732
>gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete sequence Length = 143015 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 attttggttgaaattttcgattttt 305 |||||||||||||||||||| |||| Sbjct: 25863 attttggttgaaattttcgaatttt 25887
>gb|AY007367.1| Lycopersicon esculentum tospovirus resistance protein C (Sw5-c), tospovirus resistance protein D (Sw5-d), and tospovirus resistance protein E (Sw5-e) genes, complete cds Length = 59465 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 350 ccaagccaaggcaagttgtgatggtgtgcatcc 382 ||||||||| ||||||||||||| |||||||| Sbjct: 44384 ccaagccaatgcaagttgtgatgtggtgcatcc 44416 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 124 cctactcagctttccaagatgacaatgg 151 |||||||||||||||| || |||||||| Sbjct: 42898 cctactcagctttccaggaggacaatgg 42925 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 124 cctactcagctttccaagatgacaatgg 151 |||||||||||||||| || |||||||| Sbjct: 36029 cctactcagctttccaggaggacaatgg 36056
>emb|BX119970.7| Mouse DNA sequence from clone RP23-124I6 on chromosome X, complete sequence Length = 70658 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ctggtggtgaacccaagccaa 358 ||||||||||||||||||||| Sbjct: 44331 ctggtggtgaacccaagccaa 44351
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ggttgaaattttcgattttt 305 |||||||||||||||||||| Sbjct: 696673 ggttgaaattttcgattttt 696692
>gb|DQ160050.1| Taraxacum officinale TO41-23rc (To41-23rc) mRNA, partial cds Length = 284 Score = 40.1 bits (20), Expect = 8.2 Identities = 59/72 (81%) Strand = Plus / Minus Query: 327 acatcgcttccctggtggtgaacccaagccaaggcaagttgtgatggtgtgcatcctttc 386 ||||||||||| ||||| || ||||| | || || || |||| || |||||||||||| Sbjct: 83 acatcgcttccttggtgatgcacccatgtcagtgccagctgtgcaggggtgcatcctttc 24 Query: 387 cttgtagccatc 398 ||||| |||||| Sbjct: 23 cttgttgccatc 12
>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence Length = 180338 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 catcacagctcagttcatat 84 |||||||||||||||||||| Sbjct: 46847 catcacagctcagttcatat 46828
>emb|BX088646.21| Zebrafish DNA sequence from clone DKEY-42F19 in linkage group 14, complete sequence Length = 235682 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 agttgtgatggtgtgcatcc 382 |||||||||||||||||||| Sbjct: 62979 agttgtgatggtgtgcatcc 62998
>emb|BX324158.13| Zebrafish DNA sequence from clone DKEY-148K19 in linkage group 14, complete sequence Length = 200794 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 agttgtgatggtgtgcatcc 382 |||||||||||||||||||| Sbjct: 195213 agttgtgatggtgtgcatcc 195232
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 cctgaacatcacctgcagcg 221 |||||||||||||||||||| Sbjct: 1196749 cctgaacatcacctgcagcg 1196730
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 ttttggttgaaattttcgattttt 305 |||||||||||| ||||||||||| Sbjct: 14403819 ttttggttgaaactttcgattttt 14403842
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cataaaatacacacatcaca 71 |||||||||||||||||||| Sbjct: 20489937 cataaaatacacacatcaca 20489956
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ggttgaaattttcgattttt 305 |||||||||||||||||||| Sbjct: 2176240 ggttgaaattttcgattttt 2176259
>gb|AC025906.2|AC025906 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0075H14, complete sequence Length = 155420 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 ttttggttgaaattttcgattttt 305 |||||||||||| ||||||||||| Sbjct: 18182 ttttggttgaaactttcgattttt 18205
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1254_E07 Length = 124028 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cataaaatacacacatcaca 71 |||||||||||||||||||| Sbjct: 7584 cataaaatacacacatcaca 7603
>emb|BX537302.12| Mouse DNA sequence from clone RP23-349I9 on chromosome 7, complete sequence Length = 214393 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 atcacagctcagttcatatt 85 |||||||||||||||||||| Sbjct: 205837 atcacagctcagttcatatt 205818
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ggttgaaattttcgattttt 305 |||||||||||||||||||| Sbjct: 90933 ggttgaaattttcgattttt 90952
>emb|AL929005.7| Zebrafish DNA sequence from clone CH211-223P8, complete sequence Length = 166364 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tggtgtgagtttcacagcta 270 |||||||||||||||||||| Sbjct: 44114 tggtgtgagtttcacagcta 44133
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 ttttggttgaaattttcgattttt 305 |||||||||||| ||||||||||| Sbjct: 14412061 ttttggttgaaactttcgattttt 14412084
>gb|AC147899.2| Xenopus tropicalis clone CH216-53A2, complete sequence Length = 158405 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ataaaatacacacatcacagctca 76 ||||||||||||||| |||||||| Sbjct: 21513 ataaaatacacacataacagctca 21490 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,577,178 Number of Sequences: 3902068 Number of extensions: 4577178 Number of successful extensions: 90953 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90645 Number of HSP's gapped (non-prelim): 298 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)