ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags1l21 |
|---|---|
| Clone Library Name | barley_pub |
>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) Length = 504 Score = 156 bits (395), Expect = 5e-38 Identities = 72/137 (52%), Positives = 105/137 (76%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 AF ++++NTG+FGI +T + F P+ +D+A +EL ++A P +VDQ QL+RAK + KS IL Sbjct: 368 AFSSIYNNTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQATKSAIL 427 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 NLES+ +ED+GRQ L +GER PVE LKA+DA++ D+++V K+ISSPLTMAS+G+ Sbjct: 428 MNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLISSPLTMASYGD 487 Query: 346 VLSVPAYETVRGKFSSK 296 VLS+P+Y+ V +F SK Sbjct: 488 VLSLPSYDAVSSRFRSK 504
>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit| 1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1) Length = 503 Score = 142 bits (357), Expect = 1e-33 Identities = 69/134 (51%), Positives = 98/134 (73%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 AF ++ ++TG+FGI+ + F K I+LAA+EL +A G+V+Q LDRAKA+ KS +L Sbjct: 370 AFTSIFNDTGLFGIYGCSSPQFAAKAIELAAKELKDVAG-GKVNQAHLDRAKAATKSAVL 428 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 NLES+ ED+GRQ L +GERKPV+Q LK+VD +TL D++ +K+IS PLTM S G+ Sbjct: 429 MNLESRMIAAEDIGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGSFGD 488 Query: 346 VLSVPAYETVRGKF 305 VL+VP+Y+T+ KF Sbjct: 489 VLAVPSYDTISSKF 502
>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit| 2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2) Length = 499 Score = 136 bits (343), Expect = 5e-32 Identities = 68/134 (50%), Positives = 97/134 (72%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 AF +V +NTG+FGI+ T F + I+L A E+ ++A G+V+Q LDRAKA+ KS IL Sbjct: 366 AFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVAD-GKVNQKHLDRAKAATKSAIL 424 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 NLES+ ED+GRQ L +GERKPV+Q LK VD +TL D++ +K+I+ PLTMA+ G+ Sbjct: 425 MNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVITKPLTMATFGD 484 Query: 346 VLSVPAYETVRGKF 305 VL+VP+Y++V +F Sbjct: 485 VLNVPSYDSVSKRF 498
>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 525 Score = 81.3 bits (199), Expect = 3e-15 Identities = 45/139 (32%), Positives = 79/139 (56%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 ++ + + +TG+ IHAS D V +++++ +E ++ G VD +L+RAK S+++ Sbjct: 379 SYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMS--GTVDAVELERAKTQLTSMLM 436 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 NLES+ ED+GRQ LA RK +L + + DV VA+K++ +A+ G+ Sbjct: 437 MNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGD 496 Query: 346 VLSVPAYETVRGKFSSK*G 290 + +P YE ++ SSK G Sbjct: 497 LTDLPTYEHIQTALSSKDG 515
>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 525 Score = 80.9 bits (198), Expect = 4e-15 Identities = 45/139 (32%), Positives = 78/139 (56%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 ++ + + +TG+ IHAS D V +++++ +E + G VD +L+RAK S+++ Sbjct: 379 SYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMG--GTVDTVELERAKTQLTSMLM 436 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 NLES+ ED+GRQ LA RK +L + + DV VA+K++ +A+ G+ Sbjct: 437 MNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGD 496 Query: 346 VLSVPAYETVRGKFSSK*G 290 + +P YE ++ SSK G Sbjct: 497 LTDLPTYEHIQTALSSKDG 515
>MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 77.0 bits (188), Expect = 5e-14 Identities = 42/139 (30%), Positives = 77/139 (55%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 ++ + + +TG+ IHAS D V +++++ +E + VD +L+RAK S+++ Sbjct: 378 SYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRT--VDLVELERAKTQLMSMLM 435 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 NLES+ ED+GRQ LA RK +L + + D+ VA+K++ +A+ G+ Sbjct: 436 MNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGD 495 Query: 346 VLSVPAYETVRGKFSSK*G 290 + +P YE ++ SS+ G Sbjct: 496 LTDLPTYEHIQAALSSRDG 514
>MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 77.0 bits (188), Expect = 5e-14 Identities = 42/139 (30%), Positives = 77/139 (55%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 ++ + + +TG+ IHAS D V +++++ +E + VD +L+RAK S+++ Sbjct: 378 SYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRT--VDLVELERAKTQLMSMLM 435 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 NLES+ ED+GRQ LA RK +L + + D+ VA+K++ +A+ G+ Sbjct: 436 MNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGD 495 Query: 346 VLSVPAYETVRGKFSSK*G 290 + +P YE ++ SS+ G Sbjct: 496 LTDLPTYEHIQAALSSRNG 514
>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 474 Score = 75.5 bits (184), Expect = 2e-13 Identities = 44/123 (35%), Positives = 71/123 (57%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 AF++ +S+T +FGI AS +F P + ++ A E +A + ++ RAK KS +L Sbjct: 321 AFQHAYSSTSLFGISASCVPSFNPHLCNVLAGEFVHMAR--NLSDEEVARAKNQLKSSLL 378 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 NLES+ T ED+GRQ LA +R +L+ + A+T D+ VA +++ P TM + G Sbjct: 379 MNLESQVITVEDIGRQVLAQNQRLEPLELVNNISAVTRDDLVRVAEALVAKPPTMVAVGE 438 Query: 346 VLS 338 L+ Sbjct: 439 DLT 441
>MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 482 Score = 73.6 bits (179), Expect = 6e-13 Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 2/136 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAAREL--TSLATPGQVDQTQLDRAKASAKSV 533 AF + +S++GIFGI S P+ +++ A+++ T ++ + ++ RAK KS Sbjct: 318 AFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSS 377 Query: 532 ILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASH 353 +L NLESK EDMGRQ L G + PV +++ ++ + D+S VA I + + A + Sbjct: 378 LLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNAGN 437 Query: 352 GNVLSVPAYETVRGKF 305 G + + RG F Sbjct: 438 GKGRATVVMQGDRGSF 453
>UQCR2_HUMAN (P22695) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 68.2 bits (165), Expect = 2e-11 Identities = 39/125 (31%), Positives = 66/125 (52%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 AF +S++G+FGI+ + A VI A ++ ++A G + T + AK K+ L Sbjct: 325 AFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQ-GNLSNTDVQAAKNKLKAGYL 383 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 ++ES E++G QAL G P +L+ +D++ AD+ A K +S +MA+ GN Sbjct: 384 MSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAASGN 443 Query: 346 VLSVP 332 + P Sbjct: 444 LGHTP 448
>UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 67.4 bits (163), Expect = 4e-11 Identities = 39/125 (31%), Positives = 68/125 (54%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 AF +S++G+FGI+ + AA +VI+ A ++ ++A G + + AK K+ L Sbjct: 325 AFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKAVAQ-GNLSSADVQAAKNKLKAGYL 383 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 ++E+ ++G QALA G P +L+ +D++ ADV A K +S +MA+ GN Sbjct: 384 MSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKKSMAASGN 443 Query: 346 VLSVP 332 + P Sbjct: 444 LGHTP 448
>UQCR2_BOVIN (P23004) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 67.4 bits (163), Expect = 4e-11 Identities = 40/125 (32%), Positives = 66/125 (52%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 AF +S++G+FG + + AA VI A ++ ++A G + + AK K+ L Sbjct: 325 AFNASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQ-GNLSNPDVQAAKNKLKAGYL 383 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 ++ES +++G QALA G P +L+ +DA+ ADV A K +S +MA+ GN Sbjct: 384 MSVESSEGFLDEVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRKSMAASGN 443 Query: 346 VLSVP 332 + P Sbjct: 444 LGHTP 448
>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 577 Score = 67.4 bits (163), Expect = 4e-11 Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATP---GQVDQTQLDRAKASAKS 536 AF + ++++G+FGI AS ++ + REL +L T + + ++ RAK +S Sbjct: 418 AFNHSYTDSGLFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKNQLRS 477 Query: 535 VILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMAS 356 +L NLES+ ED+GRQ G + PV ++ + ++ +T+ D+ VA +++ A Sbjct: 478 SLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVVGGMANNAG 537 Query: 355 HGN 347 G+ Sbjct: 538 QGS 540
>MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (Ubiquinol-cytochrome-c reductase complex core protein I) (EC 1.10.2.2) Length = 476 Score = 66.6 bits (161), Expect = 7e-11 Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAF-VPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVI 530 +F +S+TG++GI+ TD V ++ + RE T L + V + +++RAKA K+ I Sbjct: 338 SFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCS--NVSEAEVERAKAQLKASI 395 Query: 529 LRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVA-AKIISSPLTMASH 353 L +L+ + ED+GRQ + G R ++ + +DA++ DV A KI + +++ Sbjct: 396 LLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDIAISAV 455 Query: 352 GNVLSVPAYETVRGKFS 302 G++ + Y +RG S Sbjct: 456 GSIEGLFDYARIRGDMS 472
>UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 452 Score = 66.6 bits (161), Expect = 7e-11 Identities = 39/125 (31%), Positives = 67/125 (53%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 AF +S++G+FGI+ + AA VI+ A ++ ++A G + + AK K+ L Sbjct: 324 AFNASYSDSGLFGIYTVSQAAAAGDVINAAYNQVKAVAQ-GNLSSADVQAAKNKLKAGYL 382 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 ++E+ ++G QALA G P +L+ +DA+ ADV A K +S +M + GN Sbjct: 383 MSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAVADADVVKAAKKFVSGKKSMTASGN 442 Query: 346 VLSVP 332 + + P Sbjct: 443 LGNTP 447
>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 531 Score = 64.3 bits (155), Expect = 3e-10 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 1/132 (0%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 AF + +TG+FG++A A + + E+T LA +V + RA+ KS +L Sbjct: 394 AFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAY--RVSDADVTRARNQLKSSLL 451 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAK-IISSPLTMASHG 350 +++ + ED+GRQ L +G R P +L +DA+ + V VA K I + +++ G Sbjct: 452 LHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIG 511 Query: 349 NVLSVPAYETVR 314 + +P Y R Sbjct: 512 PIQDLPDYNKFR 523
>MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 466 Score = 63.2 bits (152), Expect = 8e-10 Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 5/141 (3%) Frame = -2 Query: 706 AFKNVHSNTGIFGIH-ASTDAAFVPKVIDLAARELTSLA---TPGQVDQTQLDRAKASAK 539 +F +S+TG++GI+ S + + + +E T ++ T G+V+ RAK+ K Sbjct: 328 SFSTSYSDTGLWGIYLVSENLMNLDDTLHFTLKEWTRMSIAPTEGEVE-----RAKSQLK 382 Query: 538 SVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII-SSPLTM 362 + +L +L+ + ED+GRQ + G+R Q+ AVDA+++ D+ VA K + + Sbjct: 383 AGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQKYLWDKDFAL 442 Query: 361 ASHGNVLSVPAYETVRGKFSS 299 A+ GN+ + Y +R SS Sbjct: 443 AAFGNIDGLKDYGRIRNDMSS 463
>MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 462 Score = 62.4 bits (150), Expect = 1e-09 Identities = 36/138 (26%), Positives = 78/138 (56%), Gaps = 3/138 (2%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAF--VPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSV 533 +F ++++G++G++ TD+ V +++ +E + + G++ +++RAKA K+ Sbjct: 325 SFSTSYADSGLWGMYIVTDSNEHNVQLIVNEILKEWKRIKS-GKISDAEVNRAKAQLKAA 383 Query: 532 ILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVA-AKIISSPLTMAS 356 +L +L+ + ED+GRQ + G+R E++ + VD IT D+ A ++ + P++M + Sbjct: 384 LLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRLQNKPVSMVA 443 Query: 355 HGNVLSVPAYETVRGKFS 302 GN +VP + K + Sbjct: 444 LGNTSTVPNVSYIEEKLN 461
>MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 457 Score = 59.3 bits (142), Expect = 1e-08 Identities = 37/136 (27%), Positives = 75/136 (55%), Gaps = 1/136 (0%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 +F +S+TG++GI+ T+ + ++ DL L + A + +++RAKA ++ +L Sbjct: 320 SFSTSYSDTGLWGIYLVTEN--LGRIDDLVHFTLQNWARLTVATRAEVERAKAQLRASLL 377 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII-SSPLTMASHG 350 +L+S + ED+GRQ L G R +++ + IT DV+ VA+++I + +++ G Sbjct: 378 LSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEMIWDKDIAVSAVG 437 Query: 349 NVLSVPAYETVRGKFS 302 ++ + Y +R S Sbjct: 438 SIEGLLDYNRIRSSIS 453
>MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 57.8 bits (138), Expect = 3e-08 Identities = 34/133 (25%), Positives = 71/133 (53%), Gaps = 2/133 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 +F +++TG++G++ +++ V ++ + +E L T V ++++ RA+ K+ +L Sbjct: 352 SFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCT--SVTESEVARARNLLKTNML 409 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASH 353 L+ ED+GRQ L + R P+ +L +DA+ + V K I SP +A+ Sbjct: 410 LQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAV 468 Query: 352 GNVLSVPAYETVR 314 G + +P ++ +R Sbjct: 469 GPIKQLPDFKQIR 481
>MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (BeMPP1) Length = 465 Score = 57.4 bits (137), Expect = 4e-08 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 2/133 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHA-STDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVI 530 +F +S+TG++GI+ S + + + RE LAT + + AK K+ + Sbjct: 327 SFNTTYSDTGLWGIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAI--AKQQLKTSL 384 Query: 529 LRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII-SSPLTMASH 353 L L+ E++GRQ LA+G R ++ + VDA+T+ DV VA + I L + + Sbjct: 385 LLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLAIVAV 444 Query: 352 GNVLSVPAYETVR 314 G V +P Y +R Sbjct: 445 GPVECLPDYNRIR 457
>MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 490 Score = 57.0 bits (136), Expect = 6e-08 Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 2/132 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 +F +++TG++GI+ + A V ++ + +E L T V ++++ RAK K+ +L Sbjct: 353 SFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCT--SVTESEVARAKNLLKTNML 410 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASH 353 L+ ED+GRQ L + R P+ +L +DA+ + V K I SP +A+ Sbjct: 411 LQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSP-AVAAV 469 Query: 352 GNVLSVPAYETV 317 G + +P + + Sbjct: 470 GPIEQLPDFNQI 481
>MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 55.8 bits (133), Expect = 1e-07 Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 2/132 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 +F +++TG++G++ + A V ++ + E L T V ++++ RAK K+ +L Sbjct: 352 SFNTSYTDTGLWGLYMVCEQATVADMLHVVQNEWKRLCT--DVTESEVARAKNLLKTNML 409 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASH 353 L+ ED+GRQ L + R P+ +L +DA+ V V K I SP +A+ Sbjct: 410 LQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSP-AIAAL 468 Query: 352 GNVLSVPAYETV 317 G + +P + + Sbjct: 469 GPIERLPDFNQI 480
>MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 55.1 bits (131), Expect = 2e-07 Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 2/132 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 +F +++TG++G++ + A V ++ +E L T V ++++ RAK K+ +L Sbjct: 352 SFNTSYTDTGLWGLYMVCEQATVADMLHAVQKEWMRLCTA--VSESEVARAKNLLKTNML 409 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASH 353 L+ ED+GRQ L + R P+ +L +DA+ V V K I SP +A+ Sbjct: 410 LQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSP-AIAAL 468 Query: 352 GNVLSVPAYETV 317 G + +P + + Sbjct: 469 GPIERLPDFNQI 480
>MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 489 Score = 54.7 bits (130), Expect = 3e-07 Identities = 33/132 (25%), Positives = 69/132 (52%), Gaps = 2/132 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL 527 +F +++TG++G++ + + V ++ + +E L T V ++++ RA+ K+ +L Sbjct: 352 SFNTSYTDTGLWGLYMVCEPSTVADMLHVVQKEWMRLCT--SVTESEVARARNLLKTNML 409 Query: 526 RNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASH 353 L+ ED+GRQ L + R P+ +L +DA+ + V K I SP +A+ Sbjct: 410 LQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAV 468 Query: 352 GNVLSVPAYETV 317 G + +P ++ + Sbjct: 469 GPIEQLPDFKQI 480
>MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 494 Score = 54.3 bits (129), Expect = 4e-07 Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 13/134 (9%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHAST--DAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSV 533 AF + ++++G+FG+ + DAA + L REL + T V + +RAK KS Sbjct: 348 AFNHSYTDSGLFGMFVTILDDAAHL--AAPLIIRELCN--TVLSVTSEETERAKNQLKSS 403 Query: 532 ILRNLESKASTTEDMGRQ-ALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPL---- 368 +L NLES+ + ED+GRQ G +++++ +DA+T +D+S VA ++++ + Sbjct: 404 LLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDLSRVARRVLTGNVSNPG 463 Query: 367 ------TMASHGNV 344 T+ HGNV Sbjct: 464 NGTGKPTVLIHGNV 477
>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 494 Score = 48.9 bits (115), Expect = 2e-05 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 5/114 (4%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFV-----PKVIDLAARELTSLATPGQVDQTQLDRAKASA 542 AF +S+ G+ G +A + ++ A REL ++ + + + +RAK Sbjct: 334 AFWAPYSDVGLLGFYAIAEPGKSYGHEWENILHYAMRELIRVSR--NISEEEFERAKNQL 391 Query: 541 KSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII 380 K + L+ + +D+GRQ L+FG R P+ + +DAI+ D+ V +++ Sbjct: 392 KLQTMLQLDGTTNIADDIGRQVLSFGARVPLASFFEQLDAISREDLIRVGPRVL 445
>UQCR1_MOUSE (Q9CZ13) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 480 Score = 47.8 bits (112), Expect = 3e-05 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 3/133 (2%) Frame = -2 Query: 703 FKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILR 524 F +S+TG+ G H DA + ++ + L T ++++ R K ++ ++ Sbjct: 344 FNISYSDTGLLGAHFVCDAMSIDDMVFFLQGQWMRLCT--SATESEVTRGKNILRNALVS 401 Query: 523 NLESKASTTEDMGRQALAFGERKPV---EQLLKAVDAITLADVSTVAAKIISSPLTMASH 353 +L+ ED+GR L +G R P+ E ++ VDA L D+ + +A + Sbjct: 402 HLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDI--CSKYFYDQCPAVAGY 459 Query: 352 GNVLSVPAYETVR 314 G + +P Y +R Sbjct: 460 GPIEQLPDYNRIR 472
>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)| Length = 412 Score = 42.0 bits (97), Expect = 0.002 Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 2/121 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTS--LATPGQVDQTQLDRAKASAKSV 533 ++ + + ++G+F I+AST ++L +E+ + + QV ++ RAK +S Sbjct: 289 SYNSAYFDSGVFTIYAST----AHDKLELLYKEIKNEIIKMTEQVSTEEILRAKTQLRSN 344 Query: 532 ILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASH 353 + E +E++G+ FG+ E++++ + +I D+ A KI S T A Sbjct: 345 LQMAQEKNTYKSEEIGKNYSVFGQYISPEEIMEIIMSIKADDIINTANKIFSGTTTSAII 404 Query: 352 G 350 G Sbjct: 405 G 405
>Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)| Length = 412 Score = 40.8 bits (94), Expect = 0.004 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 2/121 (1%) Frame = -2 Query: 706 AFKNVHSNTGIFGIHASTDAAFVPKVIDLAARELTS--LATPGQVDQTQLDRAKASAKSV 533 ++ + + ++G+F I+AST ++L RE+ + + V ++ RAK +S Sbjct: 289 SYNSAYFDSGVFTIYAST----AHNKLELLYREIKNEIIKITETVSTEEIIRAKMQLRSN 344 Query: 532 ILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASH 353 + E +E++G+ FG+ E++++ + I D+ A KI S T+A Sbjct: 345 LQMAQEQNTYKSEEIGKNYSVFGKYILPEEIIEIITNIRADDIINTANKIFSGTTTLAII 404 Query: 352 G 350 G Sbjct: 405 G 405
>PDR14_ARATH (Q7PC82) Probable pleiotropic drug resistance protein 14| Length = 1392 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -2 Query: 493 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMAS 356 DM ++ LAFGE+K V L+ ++ VA +I+ P+ +AS Sbjct: 1333 DMEKEILAFGEKKKVSDFLEDYFGYRYDSLALVAVVLIAFPILLAS 1378
>PDR15_ARATH (Q7PC81) Putative pleiotropic drug resistance protein 15| Length = 1390 Score = 31.6 bits (70), Expect = 2.5 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -2 Query: 493 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMAS 356 DM ++ LAFGE+K V L+ ++ VA +I+ P+ +AS Sbjct: 1331 DMEKEILAFGEKKKVSAFLEDYFGYRYDSLALVAVVLIAFPILLAS 1376
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 31.6 bits (70), Expect = 2.5 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = +3 Query: 375 DEMIFAATVDTSARVIASTAFRSCSTGFLSPNANAWRPMSSVVDAFDSRFLKITDF 542 D M TV T + ++A + +++ STGFL PN + +SS VD S +K T F Sbjct: 419 DAMGLGKTVMTISLLLAHS-WKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKF 473
>LRC27_HUMAN (Q9C0I9) Leucine-rich repeat-containing protein 27| Length = 530 Score = 31.2 bits (69), Expect = 3.2 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Frame = -2 Query: 649 AAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL--RNLESKASTTEDMGRQA 476 A+ +P DL L PG++ ++ +AS + L RNLE K R+ Sbjct: 392 ASKIPSATDLIDNRKVPLNPPGKMKPSKEKSPQASKEMSALQERNLEEKIKQHVLQMREQ 451 Query: 475 LAFGERKPVEQLLKAVDAITLA 410 F + P+E++ KA + + +A Sbjct: 452 RRFHGQAPLEEMRKAAEDLEIA 473
>CCD37_HUMAN (Q494V2) Coiled-coil domain-containing protein 37| Length = 611 Score = 31.2 bits (69), Expect = 3.2 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +1 Query: 43 RXATEXGPPMHDFTEFTVTYLKXNNITPPNSGGYTRQKNKI 165 R E D+T + +T K N+ P N GY +QK ++ Sbjct: 118 RAEAEHQRAFRDYTTWKLTLTKEKNVEPENMSGYIKQKRQM 158
>RS6_XYLFT (P66605) 30S ribosomal protein S6| Length = 143 Score = 30.8 bits (68), Expect = 4.2 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -2 Query: 610 ELTSLATPGQVDQTQ--LDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLL 437 E+ L P Q +Q Q L+R KA ++ N K ED GR+ LA+ P+++L+ Sbjct: 6 EIVLLVHPDQSEQVQAMLERYKA-----LIENGHGKIHRLEDWGRRQLAY----PIQKLV 56 Query: 436 KA 431 KA Sbjct: 57 KA 58
>RS6_XYLFA (P66604) 30S ribosomal protein S6| Length = 143 Score = 30.8 bits (68), Expect = 4.2 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -2 Query: 610 ELTSLATPGQVDQTQ--LDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLL 437 E+ L P Q +Q Q L+R KA ++ N K ED GR+ LA+ P+++L+ Sbjct: 6 EIVLLVHPDQSEQVQAMLERYKA-----LIENGHGKIHRLEDWGRRQLAY----PIQKLV 56 Query: 436 KA 431 KA Sbjct: 57 KA 58
>SUCC_RICPR (O05966) Succinyl-CoA synthetase beta chain (EC 6.2.1.5) (SCS-beta)| Length = 386 Score = 30.4 bits (67), Expect = 5.5 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 4/105 (3%) Frame = -2 Query: 631 VIDLAARELTSLA-TPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFG--- 464 V D +A +T +A T G VD ++ I++ A+ +D + +A+ Sbjct: 113 VFDRSASCITFIASTEGGVD---IEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYELGF 169 Query: 463 ERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPA 329 + +Q+ + V A+ A + T A +I +PL + S+GN+L++ A Sbjct: 170 KDNQAKQMKEIVKAVYNAFIETDATQIEINPLIINSYGNLLALDA 214
>UC18_MAIZE (P80624) Unknown protein from 2D-PAGE of etiolated coleoptile (Spot| 263) (Fragment) Length = 14 Score = 30.0 bits (66), Expect = 7.2 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -2 Query: 697 NVHSNTGIFGIHAS 656 +VHSNTGIFGIH S Sbjct: 1 DVHSNTGIFGIHTS 14
>ATPG_STRLI (P50007) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 302 Score = 29.6 bits (65), Expect = 9.4 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 517 ESKASTTEDMGRQALA---FGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 E + T +GR+ LA F ERK VE D T AD VAA +I + + G Sbjct: 107 EGRQVDTYIVGRRGLAHYNFRERKVVESFAGFTDEPTYADAKKVAAPLIEAIEKDTAEGG 166 Query: 346 V 344 V Sbjct: 167 V 167
>ATPG_STRCO (Q9K4D4) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 305 Score = 29.6 bits (65), Expect = 9.4 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 517 ESKASTTEDMGRQALA---FGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 347 E + T +GR+ LA F ERK VE D T AD VAA +I + + G Sbjct: 110 EGRQVDTYIVGRRGLAHYNFRERKVVESFAGFTDEPTYADAKKVAAPLIEAIEKDTAEGG 169 Query: 346 V 344 V Sbjct: 170 V 170 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,470,925 Number of Sequences: 219361 Number of extensions: 2121494 Number of successful extensions: 6380 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 5911 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6363 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
