ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1l17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 246 7e-62
2dbj|AK102333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 7e-62
3dbj|AK070395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 7e-62
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 246 7e-62
5emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb... 246 7e-62
6gb|AY111140.1| Zea mays CL11337_1 mRNA sequence 143 8e-31
7emb|AJ437533.1|OSA437533 Oryza sativa partial mRNA for myosin he... 125 2e-25
8gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete s... 50 0.008
9ref|XM_470908.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.52
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.52
11gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genom... 44 0.52
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
14dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
15gb|AC158935.4| Mus musculus chromosome 3, clone RP24-180K20, com... 42 2.1
16gb|AC026320.25| Homo sapiens 3 BAC RP11-655G22 (Roswell Park Can... 42 2.1
17emb|BX510305.5| Zebrafish DNA sequence from clone CH211-107P11 i... 42 2.1
18gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Canc... 42 2.1
19gb|AC153513.6| Mus musculus 10 BAC RP23-322K8 (Roswell Park Canc... 42 2.1
20ref|XM_423745.1| PREDICTED: Gallus gallus similar to SI:bZ6L08.1... 40 8.2
21gb|AC147649.2| Homo sapiens BAC clone RP11-188B11 from UL, compl... 40 8.2
22gb|AC148027.3| Homo sapiens BAC clone RP11-184H2 from UL, comple... 40 8.2
23gb|AE009147.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 8.2
24gb|AC145725.2| Gasterosteus aculeatus clone CH213-173B10, comple... 40 8.2
25gb|AC134878.3| Homo sapiens BAC clone RP11-131M6 from Y, complet... 40 8.2
26gb|AC134882.2| Homo sapiens BAC clone RP11-886I11 from Y, comple... 40 8.2
27gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, c... 40 8.2
28emb|CT010577.7| Mouse DNA sequence from clone RP23-318D14 on chr... 40 8.2
29gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome... 40 8.2
30gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 40 8.2
31gb|AC125195.4| Mus musculus BAC clone RP23-246M2 from 2, complet... 40 8.2
32gb|AC116178.4| Mus musculus BAC clone RP23-28O18 from 14, comple... 40 8.2
33gb|AC080068.6| Homo sapiens BAC clone RP11-97L4 from 7, complete... 40 8.2
34emb|AL390723.21| Human DNA sequence from clone RP11-19G1 on chro... 40 8.2
35emb|AL356772.14| Human DNA sequence from clone RP11-47B24 on chr... 40 8.2
36emb|AL137015.9| Human DNA sequence from clone RP13-272N16 on chr... 40 8.2
37gb|AC145212.1| Homo sapiens BAC clone RP11-1368F8 from UL, compl... 40 8.2
38emb|X99673.1|ATFUSATUF A.tumefaciens fusA & tufA genes 40 8.2
39emb|X85215.1|CIRV12345 Carnation Italian ringspot virus genomic ... 40 8.2
40emb|X15511.1|CRTV1 Cymbidium ringspot tombusvirus RNA 40 8.2
41gb|AC138774.4| Homo sapiens BAC clone RP11-1320P3 from UL, compl... 40 8.2
42emb|AL021747.2|SPBC20F10 S.pombe chromosome II cosmid c20F10 40 8.2
43emb|CR381653.11| Human DNA sequence from clone bP-21264C1 on chr... 40 8.2
44emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chr... 40 8.2
45gb|AC084734.4| Homo sapiens chromosome 8, clone RP11-317J10, com... 40 8.2
46gb|AC007996.11| Homo sapiens chromosome 18, clone RP11-9E17, com... 40 8.2
47gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 8.2
48gb|AC090193.7| Homo sapiens chromosome 8, clone RP11-174I12, com... 40 8.2
49gb|AC026785.4| Homo sapiens chromosome 5 clone CTD-2139B15, comp... 40 8.2
50ref|XM_691496.1| PREDICTED: Danio rerio similar to GABAA recepto... 40 8.2
51emb|BX000999.9| Zebrafish DNA sequence from clone DKEY-77F5 in l... 40 8.2
52ref|NM_001022288.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.2
53gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, com... 40 8.2
54dbj|AK049993.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 8.2
55gb|AY830918.1| Grapevine Algerian latent virus strain nipplefrui... 40 8.2
56emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in ... 40 8.2
57gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosom... 40 8.2
58gb|AC079120.6| Homo sapiens BAC clone RP11-345M24 from 2, comple... 40 8.2
59gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, comple... 40 8.2
60gb|U80935.1|TBU80935 Tomato bushy stunt virus pepper isolate, co... 40 8.2
61gb|AC010144.4|AC010144 Homo sapiens BAC clone RP11-309M4 from Y,... 40 8.2
62gb|AC092603.2| Homo sapiens BAC clone RP11-139J6 from 2, complet... 40 8.2
63gb|AC138777.3| Homo sapiens BAC clone RP11-1220P14 from 2, compl... 40 8.2
64gb|AY579432.1| Tomato bushy stunt virus, complete genome 40 8.2
65gb|AC148028.2| Homo sapiens chromosome UNKNOWN clone RP11-238G20... 40 8.2
66gb|AC148030.2| Homo sapiens chromosome UNKNOWN clone RP11-134K23... 40 8.2
67emb|BX649293.4| Mouse DNA sequence from clone RP23-360N18 on chr... 40 8.2
68emb|BX640538.4| Human DNA sequence from clone RP6-238B6 on chrom... 40 8.2
69emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chr... 40 8.2
70emb|BX572084.5| Human DNA sequence from clone RP11-423O2 on chro... 40 8.2
71emb|AJ236640.1|HSA236640 Homo sapiens chromosome 22 CpG island D... 40 8.2
72emb|AL583842.40| Human DNA sequence from clone RP11-417J8 on chr... 40 8.2
73emb|CT963082.1| Human DNA sequence from clone SC22CB-105A1 on ch... 40 8.2
74emb|CR382286.9| Zebrafish DNA sequence from clone CH211-12J10 in... 40 8.2
75emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chro... 40 8.2
76emb|AL355793.6| Human DNA sequence from clone RP4-694M10 on chro... 40 8.2
77emb|BX004987.9| Human DNA sequence from clone RP11-435B5 on chro... 40 8.2
78gb|M21958.1|TBSACG Tomato bushy stunt virus complete genome 40 8.2
79emb|BX119317.2| Human DNA sequence from clone RP5-875J12 on chro... 40 8.2
80emb|AL773582.6| Mouse DNA sequence from clone RP23-174J23 on chr... 40 8.2
81emb|AL844489.6| Mouse DNA sequence from clone RP23-101P8 on chro... 40 8.2
82emb|AL590523.5| Human DNA sequence from clone RP11-565G5 on chro... 40 8.2
83gb|AF267170.4| Homo sapiens chromosome 8 clone RP11-174I12 map 8... 40 8.2 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  246 bits (124), Expect = 7e-62
 Identities = 358/436 (82%)
 Strand = Plus / Minus

                                                                           
Query: 156     gtgatggagaactgccatcgacatggctcttcttcttatgaaagatgcctgtgatgtttg 215
               |||| ||||||||||| ||| ||||  ||||||||||||| || |||| ||| || ||||
Sbjct: 9913711 gtgaaggagaactgccgtcggcatgattcttcttcttatggaacatgcttgtaatatttg 9913652

                                                                           
Query: 216     gcaacacaaatcccttcctcaatagcgttctgttgctcctttgatgcccatcattcttct 275
               | | || ||| | |||  ||||||| |||||| || || | ||| | |||||||||||||
Sbjct: 9913651 gtagcataaagctctttttcaatagtgttctgctgttcttgtgaggtccatcattcttct 9913592

                                                                           
Query: 276     cggtggctttcccagaagaagccttctgtacagatgaaggtgtggttgcgtgtgcttgcc 335
               |  ||||||| |||| |||||| ||||||||||  |||| ||  ||| | ||||||||| 
Sbjct: 9913591 cattggcttttccagcagaagctttctgtacaggggaagatgcagttccatgtgcttgcg 9913532

                                                                           
Query: 336     cttctgcagaagacacggactctgcagctttcttctgttccttttcacgccacctcttaa 395
               |||||| || || |   |  || |||||||||||||| ||||| || ||||||||| | |
Sbjct: 9913531 cttctggagcaggctgagcttcagcagctttcttctgctccttctcgcgccacctcctga 9913472

                                                                           
Query: 396     gctcaccttctacagccttctttgctgcttcagccatctccgccctcttcagtgcctcct 455
               ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 9913471 gctcaccttctacagctctctttgctgcttcagccatctctgccctctttagtgcttcct 9913412

                                                                           
Query: 456     ctgttgctaattccatgtcctccatctttctccgggcagttttcattttctgtattgcct 515
               ||||||| ||||||||||| ||||||| | |||| || |  | || |||||  || ||||
Sbjct: 9913411 ctgttgccaattccatgtcttccatctctttccgagccgcctccaatttcttaatcgcct 9913352

                                                                           
Query: 516     cattctcactagctctaacagcttccacttgcgccacggcagcagctactttcatctcac 575
               |||||||||| ||||| ||||| |||||||| ||||  || ||||| |||||||||||||
Sbjct: 9913351 cattctcactggctctgacagcctccacttgagccatagcggcagcaactttcatctcac 9913292

                               
Query: 576     tcaacttctctgactc 591
               |||| |||||||||||
Sbjct: 9913291 tcaatttctctgactc 9913276
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>dbj|AK102333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090P09, full
            insert sequence
          Length = 1632

 Score =  246 bits (124), Expect = 7e-62
 Identities = 358/436 (82%)
 Strand = Plus / Minus

                                                                        
Query: 156  gtgatggagaactgccatcgacatggctcttcttcttatgaaagatgcctgtgatgtttg 215
            |||| ||||||||||| ||| ||||  ||||||||||||| || |||| ||| || ||||
Sbjct: 1360 gtgaaggagaactgccgtcggcatgattcttcttcttatggaacatgcttgtaatatttg 1301

                                                                        
Query: 216  gcaacacaaatcccttcctcaatagcgttctgttgctcctttgatgcccatcattcttct 275
            | | || ||| | |||  ||||||| |||||| || || | ||| | |||||||||||||
Sbjct: 1300 gtagcataaagctctttttcaatagtgttctgctgttcttgtgaggtccatcattcttct 1241

                                                                        
Query: 276  cggtggctttcccagaagaagccttctgtacagatgaaggtgtggttgcgtgtgcttgcc 335
            |  ||||||| |||| |||||| ||||||||||  |||| ||  ||| | ||||||||| 
Sbjct: 1240 cattggcttttccagcagaagctttctgtacaggggaagatgcagttccatgtgcttgcg 1181

                                                                        
Query: 336  cttctgcagaagacacggactctgcagctttcttctgttccttttcacgccacctcttaa 395
            |||||| || || |   |  || |||||||||||||| ||||| || ||||||||| | |
Sbjct: 1180 cttctggagcaggctgagcttcagcagctttcttctgctccttctcgcgccacctcctga 1121

                                                                        
Query: 396  gctcaccttctacagccttctttgctgcttcagccatctccgccctcttcagtgcctcct 455
            ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 1120 gctcaccttctacagctctctttgctgcttcagccatctctgccctctttagtgcttcct 1061

                                                                        
Query: 456  ctgttgctaattccatgtcctccatctttctccgggcagttttcattttctgtattgcct 515
            ||||||| ||||||||||| ||||||| | |||| || |  | || |||||  || ||||
Sbjct: 1060 ctgttgccaattccatgtcttccatctctttccgagccgcctccaatttcttaatcgcct 1001

                                                                        
Query: 516  cattctcactagctctaacagcttccacttgcgccacggcagcagctactttcatctcac 575
            |||||||||| ||||| ||||| |||||||| ||||  || ||||| |||||||||||||
Sbjct: 1000 cattctcactggctctgacagcctccacttgagccatagcggcagcaactttcatctcac 941

                            
Query: 576  tcaacttctctgactc 591
            |||| |||||||||||
Sbjct: 940  tcaatttctctgactc 925
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>dbj|AK070395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050F09, full
            insert sequence
          Length = 2355

 Score =  246 bits (124), Expect = 7e-62
 Identities = 358/436 (82%)
 Strand = Plus / Minus

                                                                        
Query: 156  gtgatggagaactgccatcgacatggctcttcttcttatgaaagatgcctgtgatgtttg 215
            |||| ||||||||||| ||| ||||  ||||||||||||| || |||| ||| || ||||
Sbjct: 2155 gtgaaggagaactgccgtcggcatgattcttcttcttatggaacatgcttgtaatatttg 2096

                                                                        
Query: 216  gcaacacaaatcccttcctcaatagcgttctgttgctcctttgatgcccatcattcttct 275
            | | || ||| | |||  ||||||| |||||| || || | ||| | |||||||||||||
Sbjct: 2095 gtagcataaagctctttttcaatagtgttctgctgttcttgtgaggtccatcattcttct 2036

                                                                        
Query: 276  cggtggctttcccagaagaagccttctgtacagatgaaggtgtggttgcgtgtgcttgcc 335
            |  ||||||| |||| |||||| ||||||||||  |||| ||  ||| | ||||||||| 
Sbjct: 2035 cattggcttttccagcagaagctttctgtacaggggaagatgcagttccatgtgcttgcg 1976

                                                                        
Query: 336  cttctgcagaagacacggactctgcagctttcttctgttccttttcacgccacctcttaa 395
            |||||| || || |   |  || |||||||||||||| ||||| || ||||||||| | |
Sbjct: 1975 cttctggagcaggctgagcttcagcagctttcttctgctccttctcgcgccacctcctga 1916

                                                                        
Query: 396  gctcaccttctacagccttctttgctgcttcagccatctccgccctcttcagtgcctcct 455
            ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 1915 gctcaccttctacagctctctttgctgcttcagccatctctgccctctttagtgcttcct 1856

                                                                        
Query: 456  ctgttgctaattccatgtcctccatctttctccgggcagttttcattttctgtattgcct 515
            ||||||| ||||||||||| ||||||| | |||| || |  | || |||||  || ||||
Sbjct: 1855 ctgttgccaattccatgtcttccatctctttccgagccgcctccaatttcttaatcgcct 1796

                                                                        
Query: 516  cattctcactagctctaacagcttccacttgcgccacggcagcagctactttcatctcac 575
            |||||||||| ||||| ||||| |||||||| ||||  || ||||| |||||||||||||
Sbjct: 1795 cattctcactggctctgacagcctccacttgagccatagcggcagcaactttcatctcac 1736

                            
Query: 576  tcaacttctctgactc 591
            |||| |||||||||||
Sbjct: 1735 tcaatttctctgactc 1720
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  246 bits (124), Expect = 7e-62
 Identities = 358/436 (82%)
 Strand = Plus / Minus

                                                                           
Query: 156     gtgatggagaactgccatcgacatggctcttcttcttatgaaagatgcctgtgatgtttg 215
               |||| ||||||||||| ||| ||||  ||||||||||||| || |||| ||| || ||||
Sbjct: 9913596 gtgaaggagaactgccgtcggcatgattcttcttcttatggaacatgcttgtaatatttg 9913537

                                                                           
Query: 216     gcaacacaaatcccttcctcaatagcgttctgttgctcctttgatgcccatcattcttct 275
               | | || ||| | |||  ||||||| |||||| || || | ||| | |||||||||||||
Sbjct: 9913536 gtagcataaagctctttttcaatagtgttctgctgttcttgtgaggtccatcattcttct 9913477

                                                                           
Query: 276     cggtggctttcccagaagaagccttctgtacagatgaaggtgtggttgcgtgtgcttgcc 335
               |  ||||||| |||| |||||| ||||||||||  |||| ||  ||| | ||||||||| 
Sbjct: 9913476 cattggcttttccagcagaagctttctgtacaggggaagatgcagttccatgtgcttgcg 9913417

                                                                           
Query: 336     cttctgcagaagacacggactctgcagctttcttctgttccttttcacgccacctcttaa 395
               |||||| || || |   |  || |||||||||||||| ||||| || ||||||||| | |
Sbjct: 9913416 cttctggagcaggctgagcttcagcagctttcttctgctccttctcgcgccacctcctga 9913357

                                                                           
Query: 396     gctcaccttctacagccttctttgctgcttcagccatctccgccctcttcagtgcctcct 455
               ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 9913356 gctcaccttctacagctctctttgctgcttcagccatctctgccctctttagtgcttcct 9913297

                                                                           
Query: 456     ctgttgctaattccatgtcctccatctttctccgggcagttttcattttctgtattgcct 515
               ||||||| ||||||||||| ||||||| | |||| || |  | || |||||  || ||||
Sbjct: 9913296 ctgttgccaattccatgtcttccatctctttccgagccgcctccaatttcttaatcgcct 9913237

                                                                           
Query: 516     cattctcactagctctaacagcttccacttgcgccacggcagcagctactttcatctcac 575
               |||||||||| ||||| ||||| |||||||| ||||  || ||||| |||||||||||||
Sbjct: 9913236 cattctcactggctctgacagcctccacttgagccatagcggcagcaactttcatctcac 9913177

                               
Query: 576     tcaacttctctgactc 591
               |||| |||||||||||
Sbjct: 9913176 tcaatttctctgactc 9913161
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>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 140806

 Score =  246 bits (124), Expect = 7e-62
 Identities = 358/436 (82%)
 Strand = Plus / Plus

                                                                         
Query: 156   gtgatggagaactgccatcgacatggctcttcttcttatgaaagatgcctgtgatgtttg 215
             |||| ||||||||||| ||| ||||  ||||||||||||| || |||| ||| || ||||
Sbjct: 18759 gtgaaggagaactgccgtcggcatgattcttcttcttatggaacatgcttgtaatatttg 18818

                                                                         
Query: 216   gcaacacaaatcccttcctcaatagcgttctgttgctcctttgatgcccatcattcttct 275
             | | || ||| | |||  ||||||| |||||| || || | ||| | |||||||||||||
Sbjct: 18819 gtagcataaagctctttttcaatagtgttctgctgttcttgtgaggtccatcattcttct 18878

                                                                         
Query: 276   cggtggctttcccagaagaagccttctgtacagatgaaggtgtggttgcgtgtgcttgcc 335
             |  ||||||| |||| |||||| ||||||||||  |||| ||  ||| | ||||||||| 
Sbjct: 18879 cattggcttttccagcagaagctttctgtacaggggaagatgcagttccatgtgcttgcg 18938

                                                                         
Query: 336   cttctgcagaagacacggactctgcagctttcttctgttccttttcacgccacctcttaa 395
             |||||| || || |   |  || |||||||||||||| ||||| || ||||||||| | |
Sbjct: 18939 cttctggagcaggctgagcttcagcagctttcttctgctccttctcgcgccacctcctga 18998

                                                                         
Query: 396   gctcaccttctacagccttctttgctgcttcagccatctccgccctcttcagtgcctcct 455
             ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 18999 gctcaccttctacagctctctttgctgcttcagccatctctgccctctttagtgcttcct 19058

                                                                         
Query: 456   ctgttgctaattccatgtcctccatctttctccgggcagttttcattttctgtattgcct 515
             ||||||| ||||||||||| ||||||| | |||| || |  | || |||||  || ||||
Sbjct: 19059 ctgttgccaattccatgtcttccatctctttccgagccgcctccaatttcttaatcgcct 19118

                                                                         
Query: 516   cattctcactagctctaacagcttccacttgcgccacggcagcagctactttcatctcac 575
             |||||||||| ||||| ||||| |||||||| ||||  || ||||| |||||||||||||
Sbjct: 19119 cattctcactggctctgacagcctccacttgagccatagcggcagcaactttcatctcac 19178

                             
Query: 576   tcaacttctctgactc 591
             |||| |||||||||||
Sbjct: 19179 tcaatttctctgactc 19194
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>gb|AY111140.1| Zea mays CL11337_1 mRNA sequence
          Length = 696

 Score =  143 bits (72), Expect = 8e-31
 Identities = 163/195 (83%)
 Strand = Plus / Plus

                                                                       
Query: 389 ctcttaagctcaccttctacagccttctttgctgcttcagccatctccgccctcttcagt 448
           ||||| ||||||||||||||||||      ||||| ||||||||||| |||||||| || 
Sbjct: 502 ctcttgagctcaccttctacagccnnnnnggctgcctcagccatctctgccctctttagg 561

                                                                       
Query: 449 gcctcctctgttgctaattccatgtcctccatctttctccgggcagttttcattttctgt 508
           ||||| |||||||| ||||||||||||||||| |   | ||||||||||  | |||||  
Sbjct: 562 gcctcttctgttgccaattccatgtcctccatttccttgcgggcagtttctagtttcttg 621

                                                                       
Query: 509 attgcctcattctcactagctctaacagcttccacttgcgccacggcagcagctactttc 568
           ||||||||||||||||| ||||| |  ||||||||||| ||||  |||||||| ||||||
Sbjct: 622 attgcctcattctcactggctctgatggcttccacttgagccatagcagcagcaactttc 681

                          
Query: 569 atctcactcaacttc 583
           || ||||||||||||
Sbjct: 682 atatcactcaacttc 696
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>emb|AJ437533.1|OSA437533 Oryza sativa partial mRNA for myosin heavy chain-like protein (myo1
           gene)
          Length = 540

 Score =  125 bits (63), Expect = 2e-25
 Identities = 138/163 (84%)
 Strand = Plus / Minus

                                                                       
Query: 429 ccatctccgccctcttcagtgcctcctctgttgctaattccatgtcctccatctttctcc 488
           ||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||| | |||
Sbjct: 540 ccatctctgccctctttagtgcttcctctgttgccaattccatgtcttccatctctttcc 481

                                                                       
Query: 489 gggcagttttcattttctgtattgcctcattctcactagctctaacagcttccacttgcg 548
           | || |  | || |||||  || |||||||||||||| ||||| ||||| |||||||| |
Sbjct: 480 gagccgcctccaatttcttaatcgcctcattctcactggctctgacagcctccacttgag 421

                                                      
Query: 549 ccacggcagcagctactttcatctcactcaacttctctgactc 591
           |||  || ||||| ||||||||||||||||| |||||||||||
Sbjct: 420 ccatagcggcagcaactttcatctcactcaatttctctgactc 378
to top
>gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete sequence
          Length = 119297

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                         
Query: 394   aagctcaccttctacagccttctttgctgcttcagccatctccgccctcttcagtgcctc 453
             ||||||||| || || ||| ||||||||||||| |||||||| ||| | ||||  |||||
Sbjct: 33306 aagctcaccctcaactgccctctttgctgcttcggccatctcggcctttttcaaggcctc 33247

                      
Query: 454   ctctgttgc 462
             || ||||||
Sbjct: 33246 ctgtgttgc 33238
to top
>ref|XM_470908.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1974

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 407  acagccttctttgctgcttcag 428
            ||||||||||||||||||||||
Sbjct: 1748 acagccttctttgctgcttcag 1727
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 407      acagccttctttgctgcttcag 428
                ||||||||||||||||||||||
Sbjct: 16301049 acagccttctttgctgcttcag 16301070
to top
>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete
             sequence
          Length = 135585

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 407   acagccttctttgctgcttcag 428
             ||||||||||||||||||||||
Sbjct: 99065 acagccttctttgctgcttcag 99086
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 407      acagccttctttgctgcttcag 428
                ||||||||||||||||||||||
Sbjct: 10853664 acagccttctttgctgcttcag 10853685
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 407      acagccttctttgctgcttcag 428
                ||||||||||||||||||||||
Sbjct: 16294682 acagccttctttgctgcttcag 16294703
to top
>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0026A08
          Length = 171272

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 407   acagccttctttgctgcttcag 428
             ||||||||||||||||||||||
Sbjct: 67449 acagccttctttgctgcttcag 67470
to top
>gb|AC158935.4| Mus musculus chromosome 3, clone RP24-180K20, complete sequence
          Length = 157284

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 92    gagaaccacaaaaatatcaatgtga 116
             ||||||||||| |||||||||||||
Sbjct: 54506 gagaaccacaataatatcaatgtga 54530
to top
>gb|AC026320.25| Homo sapiens 3 BAC RP11-655G22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172681

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 564    ctttcatctcactcaacttctctga 588
              ||||||||||||||||||| |||||
Sbjct: 107394 ctttcatctcactcaacttgtctga 107370
to top
>emb|BX510305.5| Zebrafish DNA sequence from clone CH211-107P11 in linkage group 23,
             complete sequence
          Length = 156938

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 338   tctgcagaagacacggactctgcagctttcttc 370
             ||||||||| |||| ||| ||||||||||||||
Sbjct: 37348 tctgcagaacacactgacactgcagctttcttc 37380
to top
>gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 227508

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 29   ataaatatattacataaagta 49
            |||||||||||||||||||||
Sbjct: 3364 ataaatatattacataaagta 3384
to top
>gb|AC153513.6| Mus musculus 10 BAC RP23-322K8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 223529

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    ataaatatattacataaagta 49
             |||||||||||||||||||||
Sbjct: 60533 ataaatatattacataaagta 60513
to top
>ref|XM_423745.1| PREDICTED: Gallus gallus similar to SI:bZ6L08.1 (novel protein
           similar to human cadherin, EGF LAG seven-pass G-type
           receptor (CELSR)) (LOC426068), mRNA
          Length = 2715

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 ctctgcagctttcttctgtt 374
           ||||||||||||||||||||
Sbjct: 878 ctctgcagctttcttctgtt 859
to top
>gb|AC147649.2| Homo sapiens BAC clone RP11-188B11 from UL, complete sequence
          Length = 150742

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 135694 caaatcccttcctcaatagc 135675
to top
>gb|AC148027.3| Homo sapiens BAC clone RP11-184H2 from UL, complete sequence
          Length = 148764

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  caaatcccttcctcaatagc 241
            ||||||||||||||||||||
Sbjct: 1693 caaatcccttcctcaatagc 1712
to top
>gb|AE009147.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 173
            of 256 of the complete sequence
          Length = 10298

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 408  cagccttctttgctgcttca 427
            ||||||||||||||||||||
Sbjct: 7248 cagccttctttgctgcttca 7267
to top
>gb|AC145725.2| Gasterosteus aculeatus clone CH213-173B10, complete sequence
          Length = 158904

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   atgaaggtgtggttgcgtgtgctt 332
             ||||||||||| ||||||||||||
Sbjct: 88512 atgaaggtgtgtttgcgtgtgctt 88489
to top
>gb|AC134878.3| Homo sapiens BAC clone RP11-131M6 from Y, complete sequence
          Length = 155813

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  caaatcccttcctcaatagc 241
            ||||||||||||||||||||
Sbjct: 1719 caaatcccttcctcaatagc 1738
to top
>gb|AC134882.2| Homo sapiens BAC clone RP11-886I11 from Y, complete sequence
          Length = 152654

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 121125 caaatcccttcctcaatagc 121144
to top
>gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, complete sequence
          Length = 250215

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 356    tctgcagctttcttctgttccttt 379
              ||||||||||||||||||| ||||
Sbjct: 169857 tctgcagctttcttctgttacttt 169880
to top
>emb|CT010577.7| Mouse DNA sequence from clone RP23-318D14 on chromosome 14, complete
            sequence
          Length = 195351

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 356  tctgcagctttcttctgttccttt 379
            ||||||||||||||||||| ||||
Sbjct: 5297 tctgcagctttcttctgttacttt 5320
to top
>gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome 18, complete sequence
          Length = 232320

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    tttccccaggtgatggagaa 166
              ||||||||||||||||||||
Sbjct: 212271 tttccccaggtgatggagaa 212290
to top
>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete sequence
          Length = 208462

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    tttccccaggtgatggagaa 166
              ||||||||||||||||||||
Sbjct: 135616 tttccccaggtgatggagaa 135597
to top
>gb|AC125195.4| Mus musculus BAC clone RP23-246M2 from 2, complete sequence
          Length = 195041

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    gcaaccataaatatattacataaa 46
             |||| |||||||||||||||||||
Sbjct: 22849 gcaatcataaatatattacataaa 22872
to top
>gb|AC116178.4| Mus musculus BAC clone RP23-28O18 from 14, complete sequence
          Length = 195306

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   ctctgcagctttcttctgtt 374
             ||||||||||||||||||||
Sbjct: 66898 ctctgcagctttcttctgtt 66879
to top
>gb|AC080068.6| Homo sapiens BAC clone RP11-97L4 from 7, complete sequence
          Length = 62623

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   agctttcttctgttcctttt 380
             ||||||||||||||||||||
Sbjct: 55534 agctttcttctgttcctttt 55515
to top
>emb|AL390723.21| Human DNA sequence from clone RP11-19G1 on chromosome 9 Contains part
             of a variant of the PTPRD gene for protein tyrosine
             phosphatase, receptor type, D (HPTP, PTPD, HPTPD),
             complete sequence
          Length = 94643

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aatatcaatgtgactggaaa 123
             ||||||||||||||||||||
Sbjct: 11893 aatatcaatgtgactggaaa 11912



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aatatcaatgtgactggaaa 123
             ||||||||||||||||||||
Sbjct: 10769 aatatcaatgtgactggaaa 10788
to top
>emb|AL356772.14| Human DNA sequence from clone RP11-47B24 on chromosome 10, complete
              sequence
          Length = 163861

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    tttcccagaagaagccttct 302
              ||||||||||||||||||||
Sbjct: 139113 tttcccagaagaagccttct 139132
to top
>emb|AL137015.9| Human DNA sequence from clone RP13-272N16 on chromosome Xq21.2-21.33
             Contains a CpG island, complete sequence
          Length = 99527

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ctcttcttcttatgaaagat 201
             ||||||||||||||||||||
Sbjct: 54350 ctcttcttcttatgaaagat 54369
to top
>gb|AC145212.1| Homo sapiens BAC clone RP11-1368F8 from UL, complete sequence
          Length = 191469

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 177478 caaatcccttcctcaatagc 177459
to top
>emb|X99673.1|ATFUSATUF A.tumefaciens fusA & tufA genes
          Length = 3412

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 408  cagccttctttgctgcttca 427
            ||||||||||||||||||||
Sbjct: 1804 cagccttctttgctgcttca 1785
to top
>emb|X85215.1|CIRV12345 Carnation Italian ringspot virus genomic sequence for ORF1,2,3,4,5
          Length = 4760

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   tgcaaccataaatatattac 41
            ||||||||||||||||||||
Sbjct: 1205 tgcaaccataaatatattac 1186
to top
>emb|X15511.1|CRTV1 Cymbidium ringspot tombusvirus RNA
          Length = 4733

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   tgcaaccataaatatattac 41
            ||||||||||||||||||||
Sbjct: 1189 tgcaaccataaatatattac 1170
to top
>gb|AC138774.4| Homo sapiens BAC clone RP11-1320P3 from UL, complete sequence
          Length = 194050

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  caaatcccttcctcaatagc 241
            ||||||||||||||||||||
Sbjct: 5656 caaatcccttcctcaatagc 5675
to top
>emb|AL021747.2|SPBC20F10 S.pombe chromosome II cosmid c20F10
          Length = 23000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 308  gatgaaggtgtggttgcgtgtgcttgcc 335
            |||||||||||||||| |||||| ||||
Sbjct: 5506 gatgaaggtgtggttgggtgtgcatgcc 5533
to top
>emb|CR381653.11| Human DNA sequence from clone bP-21264C1 on chromosome 21, complete
             sequence
          Length = 131056

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   caaatcccttcctcaatagc 241
             ||||||||||||||||||||
Sbjct: 16940 caaatcccttcctcaatagc 16959
to top
>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete
              sequence
          Length = 152296

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 148336 caaatcccttcctcaatagc 148317
to top
>gb|AC084734.4| Homo sapiens chromosome 8, clone RP11-317J10, complete sequence
          Length = 181044

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 573   cactcaacttctctgactct 592
             ||||||||||||||||||||
Sbjct: 86429 cactcaacttctctgactct 86448
to top
>gb|AC007996.11| Homo sapiens chromosome 18, clone RP11-9E17, complete sequence
          Length = 182884

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 183    tcttcttcttatgaaagatgcctg 206
              |||||||||| |||||||||||||
Sbjct: 125991 tcttcttcttttgaaagatgcctg 125968
to top
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 408     cagccttctttgctgcttca 427
               ||||||||||||||||||||
Sbjct: 1917364 cagccttctttgctgcttca 1917383
to top
>gb|AC090193.7| Homo sapiens chromosome 8, clone RP11-174I12, complete sequence
          Length = 167919

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   ttcacgccacctcttaagct 398
             ||||||||||||||||||||
Sbjct: 48168 ttcacgccacctcttaagct 48149
to top
>gb|AC026785.4| Homo sapiens chromosome 5 clone CTD-2139B15, complete sequence
          Length = 152010

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     cataaatatattacataaagtatg 51
              ||||||||||||||||||| ||||
Sbjct: 108027 cataaatatattacataaaatatg 108050
to top
>ref|XM_691496.1| PREDICTED: Danio rerio similar to GABAA receptor betaZ2 subunit
           (LOC568183), mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 ctctgcagctttcttctgtt 374
           ||||||||||||||||||||
Sbjct: 612 ctctgcagctttcttctgtt 593
to top
>emb|BX000999.9| Zebrafish DNA sequence from clone DKEY-77F5 in linkage group 15, complete
              sequence
          Length = 200989

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     aatgagaaccacaaaaatat 108
              ||||||||||||||||||||
Sbjct: 186994 aatgagaaccacaaaaatat 186975
to top
>ref|NM_001022288.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPBC20F10.03), partial mRNA
          Length = 1341

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 308 gatgaaggtgtggttgcgtgtgcttgcc 335
           |||||||||||||||| |||||| ||||
Sbjct: 589 gatgaaggtgtggttgggtgtgcatgcc 616
to top
>gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, complete sequence
          Length = 178009

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 439    cctcttcagtgcctcctctg 458
              ||||||||||||||||||||
Sbjct: 136471 cctcttcagtgcctcctctg 136490
to top
>dbj|AK049993.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630039L13 product:unclassifiable, full
            insert sequence
          Length = 1930

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 356  tctgcagctttcttctgttccttt 379
            ||||||||||||||||||| ||||
Sbjct: 1463 tctgcagctttcttctgttacttt 1440
to top
>gb|AY830918.1| Grapevine Algerian latent virus strain nipplefruit 92K protein, 33K
            protein, 40k protein, 24k protein, and 19k protein genes,
            complete cds
          Length = 4731

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   tgcaaccataaatatattac 41
            ||||||||||||||||||||
Sbjct: 1195 tgcaaccataaatatattac 1176
to top
>emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in linkage group 14,
            complete sequence
          Length = 166194

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 558  cagctactttcatctcactcaact 581
            |||||| |||||||||||||||||
Sbjct: 9336 cagctattttcatctcactcaact 9359
to top
>gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosome 14, complete sequence
          Length = 207534

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    ctctgcagctttcttctgtt 374
              ||||||||||||||||||||
Sbjct: 194245 ctctgcagctttcttctgtt 194226
to top
>gb|AC079120.6| Homo sapiens BAC clone RP11-345M24 from 2, complete sequence
          Length = 104547

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   cttgcccttctgcagaagac 349
             ||||||||||||||||||||
Sbjct: 16133 cttgcccttctgcagaagac 16152
to top
>gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, complete sequence
          Length = 172705

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 574  actcaacttctctgactctt 593
            ||||||||||||||||||||
Sbjct: 1548 actcaacttctctgactctt 1567
to top
>gb|U80935.1|TBU80935 Tomato bushy stunt virus pepper isolate, complete genome
          Length = 4776

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   tgcaaccataaatatattac 41
            ||||||||||||||||||||
Sbjct: 1195 tgcaaccataaatatattac 1176
to top
>gb|AC010144.4|AC010144 Homo sapiens BAC clone RP11-309M4 from Y, complete sequence
          Length = 166347

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ctcttcttcttatgaaagat 201
             ||||||||||||||||||||
Sbjct: 40488 ctcttcttcttatgaaagat 40507
to top
>gb|AC092603.2| Homo sapiens BAC clone RP11-139J6 from 2, complete sequence
          Length = 22842

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 574 actcaacttctctgactctt 593
           ||||||||||||||||||||
Sbjct: 437 actcaacttctctgactctt 418
to top
>gb|AC138777.3| Homo sapiens BAC clone RP11-1220P14 from 2, complete sequence
          Length = 220281

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 187306 caaatcccttcctcaatagc 187287
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>gb|AY579432.1| Tomato bushy stunt virus, complete genome
          Length = 4766

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   tgcaaccataaatatattac 41
            ||||||||||||||||||||
Sbjct: 1192 tgcaaccataaatatattac 1173
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>gb|AC148028.2| Homo sapiens chromosome UNKNOWN clone RP11-238G20, complete sequence
          Length = 172857

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 171144 caaatcccttcctcaatagc 171125
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>gb|AC148030.2| Homo sapiens chromosome UNKNOWN clone RP11-134K23, complete sequence
          Length = 157579

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  caaatcccttcctcaatagc 241
            ||||||||||||||||||||
Sbjct: 1693 caaatcccttcctcaatagc 1712
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>emb|BX649293.4| Mouse DNA sequence from clone RP23-360N18 on chromosome 2, complete
             sequence
          Length = 126043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ctcaatagcgttctgttgct 252
             ||||||||||||||||||||
Sbjct: 37001 ctcaatagcgttctgttgct 36982
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>emb|BX640538.4| Human DNA sequence from clone RP6-238B6 on chromosome 1, complete
             sequence
          Length = 165731

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   caaatcccttcctcaatagc 241
             ||||||||||||||||||||
Sbjct: 15892 caaatcccttcctcaatagc 15911
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>emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chromosome 22, complete
              sequence
          Length = 161147

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 159435 caaatcccttcctcaatagc 159416
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>emb|BX572084.5| Human DNA sequence from clone RP11-423O2 on chromosome 1, complete
              sequence
          Length = 186739

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 172106 caaatcccttcctcaatagc 172087
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>emb|AJ236640.1|HSA236640 Homo sapiens chromosome 22 CpG island DNA, genomic Mse1 fragment,
           clone 22CGIB49A20 , complete read
          Length = 380

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 caaatcccttcctcaatagc 241
           ||||||||||||||||||||
Sbjct: 58  caaatcccttcctcaatagc 77
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>emb|AL583842.40| Human DNA sequence from clone RP11-417J8 on chromosome 1, complete
             sequence
          Length = 195588

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   caaatcccttcctcaatagc 241
             ||||||||||||||||||||
Sbjct: 21443 caaatcccttcctcaatagc 21462
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>emb|CT963082.1| Human DNA sequence from clone SC22CB-105A1 on chromosome 22, complete
            sequence
          Length = 34474

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  caaatcccttcctcaatagc 241
            ||||||||||||||||||||
Sbjct: 2624 caaatcccttcctcaatagc 2643
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>emb|CR382286.9| Zebrafish DNA sequence from clone CH211-12J10 in linkage group 19,
              complete sequence
          Length = 149742

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    atgaaagatgcctgtgatgt 212
              ||||||||||||||||||||
Sbjct: 147429 atgaaagatgcctgtgatgt 147448
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>emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chromosome X, complete
             sequence
          Length = 223318

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 516   cattctcactagctctaaca 535
             ||||||||||||||||||||
Sbjct: 83245 cattctcactagctctaaca 83226
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>emb|AL355793.6| Human DNA sequence from clone RP4-694M10 on chromosome 1, complete
             sequence
          Length = 101333

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   caaatcccttcctcaatagc 241
             ||||||||||||||||||||
Sbjct: 95941 caaatcccttcctcaatagc 95960
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>emb|BX004987.9| Human DNA sequence from clone RP11-435B5 on chromosome 1, complete
              sequence
          Length = 201709

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 186881 caaatcccttcctcaatagc 186862
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>gb|M21958.1|TBSACG Tomato bushy stunt virus complete genome
          Length = 4776

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   tgcaaccataaatatattac 41
            ||||||||||||||||||||
Sbjct: 1194 tgcaaccataaatatattac 1175
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>emb|BX119317.2| Human DNA sequence from clone RP5-875J12 on chromosome 1, complete
             sequence
          Length = 40176

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   caaatcccttcctcaatagc 241
             ||||||||||||||||||||
Sbjct: 27182 caaatcccttcctcaatagc 27163
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>emb|AL773582.6| Mouse DNA sequence from clone RP23-174J23 on chromosome 2, complete
              sequence
          Length = 206309

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     gcaaccataaatatattacataaa 46
              |||| |||||||||||||||||||
Sbjct: 100196 gcaatcataaatatattacataaa 100219
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>emb|AL844489.6| Mouse DNA sequence from clone RP23-101P8 on chromosome 2, complete
             sequence
          Length = 213549

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 270   tcttctcggtggctttcccagaagaagc 297
             |||||| ||||||| |||||||||||||
Sbjct: 33305 tcttctaggtggctgtcccagaagaagc 33278
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>emb|AL590523.5| Human DNA sequence from clone RP11-565G5 on chromosome 22, complete
              sequence
          Length = 155397

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    caaatcccttcctcaatagc 241
              ||||||||||||||||||||
Sbjct: 142016 caaatcccttcctcaatagc 141997
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>gb|AF267170.4| Homo sapiens chromosome 8 clone RP11-174I12 map 8q24.2, complete sequence
          Length = 167955

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    ttcacgccacctcttaagct 398
              ||||||||||||||||||||
Sbjct: 119748 ttcacgccacctcttaagct 119767


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,197,185
Number of Sequences: 3902068
Number of extensions: 7197185
Number of successful extensions: 145228
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144843
Number of HSP's gapped (non-prelim): 378
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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