>ref|XM_480842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1084

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 28  cacggttgccggcgtcaccaccctcg 53
           ||||||||||||| ||||||||||||
Sbjct: 755 cacggttgccggcatcaccaccctcg 730

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 28      cacggttgccggcgtcaccaccctcg 53
               ||||||||||||| ||||||||||||
Sbjct: 8149143 cacggttgccggcatcaccaccctcg 8149118

>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7,
             complete sequence
          Length = 237129

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 250   ctttgttgttggtcagaggaaa 271
             ||||||||||||||||||||||
Sbjct: 73889 ctttgttgttggtcagaggaaa 73910

>emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in linkage group 7,
             complete sequence
          Length = 209666

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 250   ctttgttgttggtcagaggaaa 271
             ||||||||||||||||||||||
Sbjct: 18739 ctttgttgttggtcagaggaaa 18760

>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1047A05
          Length = 157517

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 28     cacggttgccggcgtcaccaccctcg 53
              ||||||||||||| ||||||||||||
Sbjct: 117454 cacggttgccggcatcaccaccctcg 117429

>dbj|AK102873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112B19, full
           insert sequence
          Length = 1084

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 28  cacggttgccggcgtcaccaccctcg 53
           ||||||||||||| ||||||||||||
Sbjct: 755 cacggttgccggcatcaccaccctcg 730

>dbj|AK061680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A02, full
           insert sequence
          Length = 594

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 28  cacggttgccggcgtcaccaccctcg 53
           ||||||||||||| ||||||||||||
Sbjct: 316 cacggttgccggcatcaccaccctcg 291

>gb|AC182658.2| Populus trichocarpa clone Pop1-124E10, complete sequence
          Length = 99811

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   gttggtcagaggaaattcct 276
             ||||||||||||||||||||
Sbjct: 70015 gttggtcagaggaaattcct 69996

>gb|AC132579.2| Mus musculus BAC clone RP24-480N2 from chromosome 6, complete sequence
          Length = 138264

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    tcagaggaaattcctttgct 281
              ||||||||||||||||||||
Sbjct: 123899 tcagaggaaattcctttgct 123918

>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    cctccacggttgccggcgtc 43
             ||||||||||||||||||||
Sbjct: 22905 cctccacggttgccggcgtc 22886

>emb|AL121580.8|HSBB455A7 Human DNA sequence from clone RP13-455A7 on chromosome 22 Contains an STS
              and GSSs, complete sequence
          Length = 137139

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    accctcttcttgtagatcaa 320
              ||||||||||||||||||||
Sbjct: 119137 accctcttcttgtagatcaa 119118

>gb|AC155839.4| Mus musculus 6 BAC RP24-96J4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 173368

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    tcagaggaaattcctttgct 281
              ||||||||||||||||||||
Sbjct: 157023 tcagaggaaattcctttgct 157004

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 34      tgccggcgtcaccaccctcg 53
               ||||||||||||||||||||
Sbjct: 2510150 tgccggcgtcaccaccctcg 2510169

>gb|L38804.1|ORAGAG Pongo pygmaeus gag protein (gag) gene, long terminal repeat
          Length = 1288

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 aggaaattcctttgcttgtt 285
           ||||||||||||||||||||
Sbjct: 908 aggaaattcctttgcttgtt 927


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,340,809
Number of Sequences: 3902068
Number of extensions: 3340809
Number of successful extensions: 52275
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52239
Number of HSP's gapped (non-prelim): 36
length of query: 523
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 500
effective length of database: 17,143,297,704
effective search space: 8571648852000
effective search space used: 8571648852000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)