ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags1k23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BC041301.1| Xenopus laevis hypothetical protein MGC53595, mRNA (cDNA clone MGC:53595 IMAGE:4683798), complete cds Length = 706 Score = 829 bits (418), Expect = 0.0 Identities = 430/433 (99%), Gaps = 1/433 (0%) Strand = Plus / Minus Query: 1 aaacacttaangataaaatgtagtttacggtggggttgaagttcttcagaataaagaaag 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 aaacacttaaagataaaatgtagtttacggtggggttgaagttcttcagaataaagaaag 463 Query: 61 aagcaacaatcaccaaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggtt 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 462 aagcaacaatcaccaaaaccagg-aaaagtgtattgttgtagaaaatggagaatgtggtt 404 Query: 121 gcctcatagtcagcaacttcatttttcttccaaaggatcctttcatctttctcttttcgg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 gcctcatagtcagcaacttcatttttcttccaaaggatcctttcatctttctcttttcgg 344 Query: 181 gacatcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacagcatct 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 343 gacatcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacggcatct 284 Query: 241 tcacgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 tcacgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagcc 224 Query: 301 acaaggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaagatcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 acaaggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaagatcc 164 Query: 361 atgtgccatatcctccaatacagccaaataggaattgcagacacgatgaaagcattgcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 atgtgccatatcctccaatacagccaaataggaattgcagacacgatgaaagcattgcca 104 Query: 421 taaaaaagcgctg 433 ||||||||||||| Sbjct: 103 taaaaaagcgctg 91
>gb|BC077002.1| Xenopus tropicalis MGC89648 protein, mRNA (cDNA clone MGC:89648 IMAGE:7025862), complete cds Length = 805 Score = 595 bits (300), Expect = e-167 Identities = 398/430 (92%), Gaps = 1/430 (0%) Strand = Plus / Minus Query: 4 cacttaangataaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaag 63 |||||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| Sbjct: 655 cacttatagataaaatgtaatttaccgtggggttgaagttcttcagaagaaagaaagaag 596 Query: 64 caacaatcaccaaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcc 123 |||||||||||||||||||| | || |||||| |||||||||||||||||||| |||||| Sbjct: 595 caacaatcaccaaaaccaggaataa-tgtattattgtagaaaatggagaatgtagttgcc 537 Query: 124 tcatagtcagcaacttcatttttcttccaaaggatcctttcatctttctcttttcgggac 183 ||||||||||| |||||||||||||||||||||||||||||||| || || || | |||| Sbjct: 536 tcatagtcagcgacttcatttttcttccaaaggatcctttcatccttttccttcctggac 477 Query: 184 atcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttca 243 ||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 476 atcttcctattgtctgcttccgaaagttttcgggtcacttctctagaaacagcatcttcg 417 Query: 244 cgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 cgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 357 Query: 304 aggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaagatccatg 363 ||||| |||||||||||||||||||| | ||||| ||||||||||||||| ||||||||| Sbjct: 356 aggtaggtgctgaccagcgtcattactgtatatagcacagccgactgcaccagatccatg 297 Query: 364 tgccatatcctccaatacagccaaataggaattgcagacacgatgaaagcattgccataa 423 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 296 tgccatattctccaatacagccaaatggggattgcagacacgatgaaagcattgccgtag 237 Query: 424 aaaagcgctg 433 |||||||||| Sbjct: 236 aaaagcgctg 227
>ref|NM_001005080.1| Xenopus tropicalis MGC89648 protein (MGC89648), mRNA Length = 773 Score = 595 bits (300), Expect = e-167 Identities = 398/430 (92%), Gaps = 1/430 (0%) Strand = Plus / Minus Query: 4 cacttaangataaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaag 63 |||||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| Sbjct: 655 cacttatagataaaatgtaatttaccgtggggttgaagttcttcagaagaaagaaagaag 596 Query: 64 caacaatcaccaaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcc 123 |||||||||||||||||||| | || |||||| |||||||||||||||||||| |||||| Sbjct: 595 caacaatcaccaaaaccaggaataa-tgtattattgtagaaaatggagaatgtagttgcc 537 Query: 124 tcatagtcagcaacttcatttttcttccaaaggatcctttcatctttctcttttcgggac 183 ||||||||||| |||||||||||||||||||||||||||||||| || || || | |||| Sbjct: 536 tcatagtcagcgacttcatttttcttccaaaggatcctttcatccttttccttcctggac 477 Query: 184 atcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttca 243 ||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 476 atcttcctattgtctgcttccgaaagttttcgggtcacttctctagaaacagcatcttcg 417 Query: 244 cgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 cgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 357 Query: 304 aggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaagatccatg 363 ||||| |||||||||||||||||||| | ||||| ||||||||||||||| ||||||||| Sbjct: 356 aggtaggtgctgaccagcgtcattactgtatatagcacagccgactgcaccagatccatg 297 Query: 364 tgccatatcctccaatacagccaaataggaattgcagacacgatgaaagcattgccataa 423 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 296 tgccatattctccaatacagccaaatggggattgcagacacgatgaaagcattgccgtag 237 Query: 424 aaaagcgctg 433 |||||||||| Sbjct: 236 aaaagcgctg 227
>emb|CR761339.2| Xenopus tropicalis finished cDNA, clone TEgg087d10 Length = 673 Score = 595 bits (300), Expect = e-167 Identities = 398/430 (92%), Gaps = 1/430 (0%) Strand = Plus / Minus Query: 4 cacttaangataaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaag 63 |||||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| Sbjct: 520 cacttatagataaaatgtaatttaccgtggggttgaagttcttcagaagaaagaaagaag 461 Query: 64 caacaatcaccaaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcc 123 |||||||||||||||||||| | || |||||| |||||||||||||||||||| |||||| Sbjct: 460 caacaatcaccaaaaccaggaataa-tgtattattgtagaaaatggagaatgtagttgcc 402 Query: 124 tcatagtcagcaacttcatttttcttccaaaggatcctttcatctttctcttttcgggac 183 ||||||||||| |||||||||||||||||||||||||||||||| || || || | |||| Sbjct: 401 tcatagtcagcgacttcatttttcttccaaaggatcctttcatccttttccttcctggac 342 Query: 184 atcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttca 243 ||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 341 atcttcctattgtctgcttccgaaagttttcgggtcacttctctagaaacagcatcttcg 282 Query: 244 cgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 cgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 222 Query: 304 aggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaagatccatg 363 ||||| |||||||||||||||||||| | ||||| ||||||||||||||| ||||||||| Sbjct: 221 aggtaggtgctgaccagcgtcattactgtatatagcacagccgactgcaccagatccatg 162 Query: 364 tgccatatcctccaatacagccaaataggaattgcagacacgatgaaagcattgccataa 423 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 161 tgccatattctccaatacagccaaatggggattgcagacacgatgaaagcattgccgtag 102 Query: 424 aaaagcgctg 433 |||||||||| Sbjct: 101 aaaagcgctg 92
>gb|BC053768.1| Xenopus laevis hypothetical protein MGC64286, mRNA (cDNA clone MGC:64286 IMAGE:6874131), complete cds Length = 738 Score = 571 bits (288), Expect = e-160 Identities = 395/430 (91%), Gaps = 1/430 (0%) Strand = Plus / Minus Query: 4 cacttaangataaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaag 63 ||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 563 cacttaaagataaaatgtaatttacggtagggttgaagctcttcagaataaagaaagaag 504 Query: 64 caacaatcaccaaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcc 123 ||| ||||||||||||||| | ||| ||||| |||||||||||||||||||| |||||| Sbjct: 503 caatgatcaccaaaaccaggaataag-gtattattgtagaaaatggagaatgttgttgcc 445 Query: 124 tcatagtcagcaacttcatttttcttccaaaggatcctttcatctttctcttttcgggac 183 ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 444 tcataatcagcaacttcattcttcttccaaaggatcctctcatctttctcttttcgcgac 385 Query: 184 atcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttca 243 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 384 atcttcctgttgtctgcttccgaaagttttcgggtcacttctctagaaacagcatcttca 325 Query: 244 cgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 303 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 cgtttctgtgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 265 Query: 304 aggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaagatccatg 363 ||||| ||||||| || |||||||| || |||||||||||||| |||||||||||| Sbjct: 264 aggtaggtgctgagcaatgtcattacaatgtacaacacagccgactggacaagatccatg 205 Query: 364 tgccatatcctccaatacagccaaataggaattgcagacacgatgaaagcattgccataa 423 |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 204 tgccatattctccaatacagccaaatggggattgcagacacgatgaaagcattgccatag 145 Query: 424 aaaagcgctg 433 ||||| |||| Sbjct: 144 aaaagtgctg 135
>dbj|AB058505.1| Xenopus laevis XTRAP-gamma mRNA for translocon-associtaed protein gamma, complete cds Length = 597 Score = 571 bits (288), Expect = e-160 Identities = 395/430 (91%), Gaps = 1/430 (0%) Strand = Plus / Minus Query: 4 cacttaangataaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaag 63 ||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 514 cacttaaagataaaatgtaatttacggtagggttgaagctcttcagaataaagaaagaag 455 Query: 64 caacaatcaccaaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcc 123 ||| ||||||||||||||| | ||| ||||| |||||||||||||||||||| |||||| Sbjct: 454 caatgatcaccaaaaccaggaataag-gtattattgtagaaaatggagaatgttgttgcc 396 Query: 124 tcatagtcagcaacttcatttttcttccaaaggatcctttcatctttctcttttcgggac 183 ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 395 tcataatcagcaacttcattcttcttccaaaggatcctctcatctttctcttttcgcgac 336 Query: 184 atcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttca 243 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 335 atcttcctgttgtctgcttccgaaagttttcgggtcacttctctagaaacagcatcttca 276 Query: 244 cgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 303 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cgtttctgtgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccaca 216 Query: 304 aggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaagatccatg 363 ||||| ||||||| ||| |||||||| || |||||||| ||||| |||||||||||| Sbjct: 215 aggtaggtgctgagcagtgtcattacaatgtacaacacagctgactggacaagatccatg 156 Query: 364 tgccatatcctccaatacagccaaataggaattgcagacacgatgaaagcattgccataa 423 |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 155 tgccatattctccaatacagccaaatggggattgcagacacgatgaaagcattgccatag 96 Query: 424 aaaagcgctg 433 ||||| |||| Sbjct: 95 aaaagtgctg 86
>gb|AY724496.1| Rattus norvegicus clone UI-R-FJ0-cpw-j-22-0-UI unknown mRNA Length = 2311 Score = 262 bits (132), Expect = 8e-67 Identities = 334/400 (83%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 17 aatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaa 76 ||||||||| || |||||||||||||||||||| |||||||| || |||||||| |||| Sbjct: 531 aatgtagttcactgtggggttgaagttcttcagtataaagaaggaggcaacaataaccag 472 Query: 77 aaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaa 136 ||||||| || || || ||||| ||||| ||||||||||| || || ||||| || |||| Sbjct: 471 aaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcggcaa 413 Query: 137 cttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttat 196 ||||||| |||||||| ||||| |||||||||||||| || ||||||||||| | |||| Sbjct: 412 cttcattcttcttccacaggattctttcatctttctccttccgggacatctttctattat 353 Query: 197 ctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgcca 256 | ||||| |||||||| || ||||||||| | |||||||||||||| | ||||| || | Sbjct: 352 cagcttcagaaagtttgcgggtcacttctttggaaacagcatcttccctcttctgtgcta 293 Query: 257 ccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctga 316 | ||||| ||||| |||||||| ||||||||||||||||| || || | ||||||||| | Sbjct: 292 ctttgtgcttgagaacaaattttacattcttgtatgcaaaggctaccaagtaagtgctta 233 Query: 317 ccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcc 376 | | |||||| ||| || | ||||| ||||| | ||||||||| |||||||| |||| Sbjct: 232 ctaacgtcatcacgctgtacagaacagcagactggataagatccatatgccatattctcc 173 Query: 377 aatacagccaaataggaattgcagacacgatgaaagcatt 416 | |||| ||| || ||||| |||||||||||||| ||||| Sbjct: 172 agtacaaccagatgggaatggcagacacgatgaacgcatt 133
>ref|NM_031120.2| Rattus norvegicus signal sequence receptor, gamma (Ssr3), mRNA Length = 2955 Score = 262 bits (132), Expect = 8e-67 Identities = 334/400 (83%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 17 aatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaa 76 ||||||||| || |||||||||||||||||||| |||||||| || |||||||| |||| Sbjct: 523 aatgtagttcactgtggggttgaagttcttcagtataaagaaggaggcaacaataaccag 464 Query: 77 aaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaa 136 ||||||| || || || ||||| ||||| ||||||||||| || || ||||| || |||| Sbjct: 463 aaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcggcaa 405 Query: 137 cttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttat 196 ||||||| |||||||| ||||| |||||||||||||| || ||||||||||| | |||| Sbjct: 404 cttcattcttcttccacaggattctttcatctttctccttccgggacatctttctattat 345 Query: 197 ctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgcca 256 | ||||| |||||||| || ||||||||| | |||||||||||||| | ||||| || | Sbjct: 344 cagcttcagaaagtttgcgggtcacttctttggaaacagcatcttccctcttctgtgcta 285 Query: 257 ccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctga 316 | ||||| ||||| |||||||| ||||||||||||||||| || || | ||||||||| | Sbjct: 284 ctttgtgcttgagaacaaattttacattcttgtatgcaaaggctaccaagtaagtgctta 225 Query: 317 ccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcc 376 | | |||||| ||| || | ||||| ||||| | ||||||||| |||||||| |||| Sbjct: 224 ctaacgtcatcacgctgtacagaacagcagactggataagatccatatgccatattctcc 165 Query: 377 aatacagccaaataggaattgcagacacgatgaaagcatt 416 | |||| ||| || ||||| |||||||||||||| ||||| Sbjct: 164 agtacaaccagatgggaatggcagacacgatgaacgcatt 125
>gb|BC062015.1| Rattus norvegicus signal sequence receptor, gamma, mRNA (cDNA clone MGC:72411 IMAGE:5621495), complete cds Length = 2955 Score = 262 bits (132), Expect = 8e-67 Identities = 334/400 (83%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 17 aatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaa 76 ||||||||| || |||||||||||||||||||| |||||||| || |||||||| |||| Sbjct: 523 aatgtagttcactgtggggttgaagttcttcagtataaagaaggaggcaacaataaccag 464 Query: 77 aaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaa 136 ||||||| || || || ||||| ||||| ||||||||||| || || ||||| || |||| Sbjct: 463 aaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcggcaa 405 Query: 137 cttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttat 196 ||||||| |||||||| ||||| |||||||||||||| || ||||||||||| | |||| Sbjct: 404 cttcattcttcttccacaggattctttcatctttctccttccgggacatctttctattat 345 Query: 197 ctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgcca 256 | ||||| |||||||| || ||||||||| | |||||||||||||| | ||||| || | Sbjct: 344 cagcttcagaaagtttgcgggtcacttctttggaaacagcatcttccctcttctgtgcta 285 Query: 257 ccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctga 316 | ||||| ||||| |||||||| ||||||||||||||||| || || | ||||||||| | Sbjct: 284 ctttgtgcttgagaacaaattttacattcttgtatgcaaaggctaccaagtaagtgctta 225 Query: 317 ccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcc 376 | | |||||| ||| || | ||||| ||||| | ||||||||| |||||||| |||| Sbjct: 224 ctaacgtcatcacgctgtacagaacagcagactggataagatccatatgccatattctcc 165 Query: 377 aatacagccaaataggaattgcagacacgatgaaagcatt 416 | |||| ||| || ||||| |||||||||||||| ||||| Sbjct: 164 agtacaaccagatgggaatggcagacacgatgaacgcatt 125
>emb|Z14030.1|RNSSRGAM R.norvegicus mRNA for TRAP-complex gamma subunit Length = 598 Score = 254 bits (128), Expect = 2e-64 Identities = 333/400 (83%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 17 aatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaa 76 ||||||||| || ||||||||||||||||||| |||||||| || |||||||| |||| Sbjct: 531 aatgtagttcactctggggttgaagttcttcagtataaagaaggaggcaacaataaccag 472 Query: 77 aaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaa 136 ||||||| || || || ||||| ||||| ||||||||||| || || ||||| || |||| Sbjct: 471 aaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcggcaa 413 Query: 137 cttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttat 196 ||||||| |||||||| ||||| |||||||||||||| || ||||||||||| | |||| Sbjct: 412 cttcattcttcttccacaggattctttcatctttctccttccgggacatctttctattat 353 Query: 197 ctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgcca 256 | ||||| |||||||| || ||||||||| | |||||||||||||| | ||||| || | Sbjct: 352 cagcttcagaaagtttgcgggtcacttctttggaaacagcatcttccctcttctgtgcta 293 Query: 257 ccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctga 316 | ||||| ||||| |||||||| ||||||||||||||||| || || | ||||||||| | Sbjct: 292 ctttgtgcttgagaacaaattttacattcttgtatgcaaaggctaccaagtaagtgctta 233 Query: 317 ccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcc 376 | | |||||| ||| || | ||||| ||||| | ||||||||| |||||||| |||| Sbjct: 232 ctaacgtcatcacgctgtacagaacagcagactggataagatccatatgccatattctcc 173 Query: 377 aatacagccaaataggaattgcagacacgatgaaagcatt 416 | |||| ||| || ||||| |||||||||||||| ||||| Sbjct: 172 agtacaaccagatgggaatggcagacacgatgaacgcatt 133
>emb|CT010172.1| Mus musculus full open reading frame cDNA clone RZPDo836B0450D for gene Ssr3, Signal sequence receptor, gamma; complete cds, incl. stopcodon Length = 558 Score = 246 bits (124), Expect = 5e-62 Identities = 329/396 (83%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 503 aaaatgtagtttactgtggggttgaagttcttcagtataaagaaggaagcaacaataacc 444 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | ||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 443 agaaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcagc 385 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| || Sbjct: 384 aacttcattcttcttccacaggattctttcgtctttctccttccgggacatcttcctatt 325 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||| ||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 324 atcagcttcagaaagctttcgagtcacttctttggaaacagcatcctccctcttctgtgc 265 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 ||| ||||| || || |||||||| ||||||||||| || || || || | ||||||||| Sbjct: 264 cactttgtgcttcagaacaaattttacattcttgtacgcgaaggctaccaagtaagtgct 205 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || | ||||| || || | |||||| ||||| | |||||||| |||||||| || Sbjct: 204 tactaaggtcatcacactgtagagcacagcagactggatgagatccatatgccatattct 145 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||||| ||| || || || |||||||||||||| Sbjct: 144 ccaatacaaccagatggggatggcagacacgatgaa 109
>dbj|AK150255.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530149J12 product:signal sequence receptor, gamma, full insert sequence Length = 2873 Score = 246 bits (124), Expect = 5e-62 Identities = 329/396 (83%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 513 aaaatgtagtttactgtggggttgaagttcttcagtataaagaaggaagcaacaataacc 454 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | ||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 453 agaaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcagc 395 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| || Sbjct: 394 aacttcattcttcttccacaggattctttcgtctttctccttccgggacatcttcctatt 335 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||| ||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 334 atcagcttcagaaagctttcgagtcacttctttggaaacagcatcctccctcttctgtgc 275 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 ||| ||||| || || |||||||| ||||||||||| || || || || | ||||||||| Sbjct: 274 cactttgtgcttcagaacaaattttacattcttgtacgcgaaggctactaagtaagtgct 215 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || | ||||| || || | |||||| ||||| | |||||||| |||||||| || Sbjct: 214 tactaaggtcatcacactgtagagcacagcagactggatgagatccatatgccatattct 155 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||||| ||| || || || |||||||||||||| Sbjct: 154 ccaatacaaccagatggggatggcagacacgatgaa 119
>dbj|AK088555.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430020D07 product:TRANSLOCON-ASSOCIATED PROTEIN, GAMMA SUBUNIT (TRAP-GAMMA) (SIGNAL SEQUENCE RECEPTOR GAMMA SUBUNIT) (SSR-GAMMA) homolog [Rattus norvegicus], full insert sequence Length = 2883 Score = 246 bits (124), Expect = 5e-62 Identities = 329/396 (83%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 524 aaaatgtagtttactgtggggttgaagttcttcagtataaagaaggaagcaacaataacc 465 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | ||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 464 agaaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcagc 406 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| || Sbjct: 405 aacttcattcttcttccacaggattctttcgtctttctccttccgggacatcttcctatt 346 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||| ||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 345 atcagcttcagaaagctttcgagtcacttctttggaaacagcatcctccctcttctgtgc 286 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 ||| ||||| || || |||||||| ||||||||||| || || || || | ||||||||| Sbjct: 285 cactttgtgcttcagaacaaattttacattcttgtacgcgaaggctactaagtaagtgct 226 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || | ||||| || || | |||||| ||||| | |||||||| |||||||| || Sbjct: 225 tactaaggtcatcacactgtagagcacagcagactggatgagatccatatgccatattct 166 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||||| ||| || || || |||||||||||||| Sbjct: 165 ccaatacaaccagatggggatggcagacacgatgaa 130
>dbj|AK002818.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610038P07 product:TRANSLOCON-ASSOCIATED PROTEIN, GAMMA SUBUNIT (TRAP-GAMMA) (SIGNAL SEQUENCE RECEPTOR GAMMA SUBUNIT) (SSR-GAMMA) homolog [Rattus norvegicus], full insert sequence Length = 2886 Score = 246 bits (124), Expect = 5e-62 Identities = 329/396 (83%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 520 aaaatgtagtttactgtggggttgaagttcttcagtataaagaaggaagcaacaataacc 461 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | ||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 460 agaaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcagc 402 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| || Sbjct: 401 aacttcattcttcttccacaggattctttcgtctttctccttccgggacatcttcctatt 342 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||| ||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 341 atcagcttcagaaagctttcgagtcacttctttggaaacagcatcctccctcttctgtgc 282 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 ||| ||||| || || |||||||| ||||||||||| || || || || | ||||||||| Sbjct: 281 cactttgtgcttcagaacaaattttacattcttgtacgcgaaggctactaagtaagtgct 222 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || | ||||| || || | |||||| ||||| | |||||||| |||||||| || Sbjct: 221 tactaaggtcatcacactgtagagcacagcagactggatgagatccatatgccatattct 162 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||||| ||| || || || |||||||||||||| Sbjct: 161 ccaatacaaccagatggggatggcagacacgatgaa 126
>dbj|AK076235.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432406A21 product:TRANSLOCON-ASSOCIATED PROTEIN, GAMMA SUBUNIT (TRAP-GAMMA) (SIGNAL SEQUENCE RECEPTOR GAMMA SUBUNIT) (SSR-GAMMA) homolog [Rattus norvegicus], full insert sequence Length = 2921 Score = 246 bits (124), Expect = 5e-62 Identities = 329/396 (83%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 552 aaaatgtagtttactgtggggttgaagttcttcagtataaagaaggaagcaacaataacc 493 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | ||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 492 agaaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcagc 434 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| || Sbjct: 433 aacttcattcttcttccacaggattctttcgtctttctccttccgggacatcttcctatt 374 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||| ||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 373 atcagcttcagaaagctttcgagtcacttctttggaaacagcatcctccctcttctgtgc 314 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 ||| ||||| || || |||||||| ||||||||||| || || || || | ||||||||| Sbjct: 313 cactttgtgcttcagaacaaattttacattcttgtacgcgaaggctactaagtaagtgct 254 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || | ||||| || || | |||||| ||||| | |||||||| |||||||| || Sbjct: 253 tactaaggtcatcacactgtagagcacagcagactggatgagatccatatgccatattct 194 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||||| ||| || || || |||||||||||||| Sbjct: 193 ccaatacaaccagatggggatggcagacacgatgaa 158
>gb|BC020335.1| Mus musculus signal sequence receptor, gamma, mRNA (cDNA clone IMAGE:3709504) Length = 1044 Score = 246 bits (124), Expect = 5e-62 Identities = 329/396 (83%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 491 aaaatgtagtttactgtggggttgaagttcttcagtataaagaaggaagcaacaataacc 432 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | ||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 431 agaaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcagc 373 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| || Sbjct: 372 aacttcattcttcttccacaggattctttcgtctttctccttccgggacatcttcctatt 313 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||| ||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 312 atcagcttcagaaagctttcgagtcacttctttggaaacagcatcctccctcttctgtgc 253 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 ||| ||||| || || |||||||| ||||||||||| || || || || | ||||||||| Sbjct: 252 cactttgtgcttcagaacaaattttacattcttgtacgcgaaggctactaagtaagtgct 193 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || | ||||| || || | |||||| ||||| | |||||||| |||||||| || Sbjct: 192 tactaaggtcatcacactgtagagcacagcagactggatgagatccatatgccatattct 133 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||||| ||| || || || |||||||||||||| Sbjct: 132 ccaatacaaccagatggggatggcagacacgatgaa 97
>gb|BC011111.1| Mus musculus signal sequence receptor, gamma, mRNA (cDNA clone MGC:18930 IMAGE:3965897), complete cds Length = 2913 Score = 246 bits (124), Expect = 5e-62 Identities = 329/396 (83%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 526 aaaatgtagtttactgtggggttgaagttcttcagtataaagaaggaagcaacaataacc 467 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | ||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 466 agaaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcagc 408 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| || Sbjct: 407 aacttcattcttcttccacaggattctttcgtctttctccttccgggacatcttcctatt 348 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||| ||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 347 atcagcttcagaaagctttcgagtcacttctttggaaacagcatcctccctcttctgtgc 288 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 ||| ||||| || || |||||||| ||||||||||| || || || || | ||||||||| Sbjct: 287 cactttgtgcttcagaacaaattttacattcttgtacgcgaaggctactaagtaagtgct 228 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || | ||||| || || | |||||| ||||| | |||||||| |||||||| || Sbjct: 227 tactaaggtcatcacactgtagagcacagcagactggatgagatccatatgccatattct 168 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||||| ||| || || || |||||||||||||| Sbjct: 167 ccaatacaaccagatggggatggcagacacgatgaa 132
>ref|NM_026155.1| Mus musculus signal sequence receptor, gamma (Ssr3), mRNA Length = 2886 Score = 246 bits (124), Expect = 5e-62 Identities = 329/396 (83%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 520 aaaatgtagtttactgtggggttgaagttcttcagtataaagaaggaagcaacaataacc 461 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | ||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 460 agaaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcagc 402 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| || Sbjct: 401 aacttcattcttcttccacaggattctttcgtctttctccttccgggacatcttcctatt 342 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||| ||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 341 atcagcttcagaaagctttcgagtcacttctttggaaacagcatcctccctcttctgtgc 282 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 ||| ||||| || || |||||||| ||||||||||| || || || || | ||||||||| Sbjct: 281 cactttgtgcttcagaacaaattttacattcttgtacgcgaaggctactaagtaagtgct 222 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || | ||||| || || | |||||| ||||| | |||||||| |||||||| || Sbjct: 221 tactaaggtcatcacactgtagagcacagcagactggatgagatccatatgccatattct 162 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||||| ||| || || || |||||||||||||| Sbjct: 161 ccaatacaaccagatggggatggcagacacgatgaa 126
>dbj|AK029353.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833403D03 product:TRANSLOCON-ASSOCIATED PROTEIN, GAMMA SUBUNIT (TRAP-GAMMA) (SIGNAL SEQUENCE RECEPTOR GAMMA SUBUNIT) (SSR-GAMMA) homolog [Rattus norvegicus], full insert sequence Length = 1470 Score = 224 bits (113), Expect = 2e-55 Identities = 315/381 (82%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 30 gtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaaccaggnaaaag 89 |||||||||||||||||||| |||||||| ||||||||||| |||| ||||||| || || Sbjct: 505 gtggggttgaagttcttcagtataaagaaggaagcaacaataaccagaaccagg-aacag 447 Query: 90 tgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttctt 149 || ||||| ||||| ||||||||||| || || ||||| |||||||||||||| ||||| Sbjct: 446 agtgttgttatagaagatggagaatgttgtagcttcataatcagcaacttcattcttctt 387 Query: 150 ccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgcttctgaaag 209 ||| ||||| ||||| |||||||| || ||||||||||||| ||||| ||||| ||||| Sbjct: 386 ccacaggattctttcgtctttctccttccgggacatcttcctattatcagcttcagaaag 327 Query: 210 ttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccaccttgtgtttgag 269 ||||| ||||||||| | ||||||||||| || | ||||| ||||| ||||| || || Sbjct: 326 ctttcgagtcacttctttggaaacagcatcctccctcttctgtgccactttgtgcttcag 267 Query: 270 gacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccagcgtcattac 329 |||||||| ||||||||||| || || || || | ||||||||| || | ||||| || Sbjct: 266 aacaaattttacattcttgtacgcgaaggctactaagtaagtgcttactaaggtcatcac 207 Query: 330 ggcatataacacagccgactgcacaagatccatgtgccatatcctccaatacagccaaat 389 || | |||||| ||||| | |||||||| |||||||| |||||||||| ||| || Sbjct: 206 actgtagagcacagcagactggatgagatccatatgccatattctccaatacaaccagat 147 Query: 390 aggaattgcagacacgatgaa 410 || || |||||||||||||| Sbjct: 146 ggggatggcagacacgatgaa 126
>ref|XM_534317.2| PREDICTED: Canis familiaris similar to signal sequence receptor, gamma, transcript variant 1 (LOC477124), mRNA Length = 1112 Score = 214 bits (108), Expect = 2e-52 Identities = 325/396 (82%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 ||||| ||||| || || |||||||||||||||| |||||||| || |||||||| ||| Sbjct: 562 aaaatatagttcaccgttgggttgaagttcttcaatataaagaaggaggcaacaatgacc 503 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 || |||||| || || || ||||| ||||| ||||| ||||| || || ||||| ||||| Sbjct: 502 aagaccagg-aatagggtgttgttatagaagatggaaaatgttgtagcttcataatcagc 444 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| | || ||||||||||| || ||||| |||||||| | ||| Sbjct: 443 aacttcattcttcttccacaaaattctttcatctttttcctttcgagacatctttctgtt 384 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| || |||||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 383 atcagcttcagagagttttcgagtcacttctttggaaacagcatcctccctcttctgtgc 324 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 || ||||||||||| |||||||| || || |||||||| |||||||| ||||||||||| Sbjct: 323 tactttgtgtttgagaacaaatttcacgtttttgtatgcgaaagccaccaggtaagtgct 264 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || || ||||| || || | ||| |||||||| | ||||||||||||||||| | Sbjct: 263 tacgagggtcatcacactgtagagcacggccgactgaatgagatccatgtgccatattcg 204 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||||||||| || || || || ||||||||||| Sbjct: 203 ccaatacagccagatggggatggcggacacgatgaa 168
>ref|XM_847789.1| PREDICTED: Canis familiaris similar to signal sequence receptor, gamma, transcript variant 2 (LOC477124), mRNA Length = 751 Score = 210 bits (106), Expect = 3e-51 Identities = 311/378 (82%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 33 gggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaaccaggnaaaagtgt 92 |||||||||||||||| |||||||| || |||||||| ||||| |||||| || || || Sbjct: 500 gggttgaagttcttcaatataaagaaggaggcaacaatgaccaagaccagg-aatagggt 442 Query: 93 attgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttcca 152 ||||| ||||| ||||| ||||| || || ||||| |||||||||||||| |||||||| Sbjct: 441 gttgttatagaagatggaaaatgttgtagcttcataatcagcaacttcattcttcttcca 382 Query: 153 aaggatcctttcatctttctcttttcgggacatcttccggttatctgcttctgaaagttt 212 | || ||||||||||| || ||||| |||||||| | |||||| ||||| || ||||| Sbjct: 381 caaaattctttcatctttttcctttcgagacatctttctgttatcagcttcagagagttt 322 Query: 213 tcgcgtcacttctctagaaacagcatcttcacgtttctgcgccaccttgtgtttgaggac 272 ||| ||||||||| | ||||||||||| || | ||||| || || ||||||||||| || Sbjct: 321 tcgagtcacttctttggaaacagcatcctccctcttctgtgctactttgtgtttgagaac 262 Query: 273 aaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccagcgtcattacggc 332 |||||| || || |||||||| |||||||| ||||||||||| || || ||||| || Sbjct: 261 aaatttcacgtttttgtatgcgaaagccaccaggtaagtgcttacgagggtcatcacact 202 Query: 333 atataacacagccgactgcacaagatccatgtgccatatcctccaatacagccaaatagg 392 || | ||| |||||||| | ||||||||||||||||| | |||||||||||| || || Sbjct: 201 gtagagcacggccgactgaatgagatccatgtgccatattcgccaatacagccagatggg 142 Query: 393 aattgcagacacgatgaa 410 || || ||||||||||| Sbjct: 141 gatggcggacacgatgaa 124
>dbj|AK162235.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420467D24 product:signal sequence receptor, gamma, full insert sequence Length = 2024 Score = 206 bits (104), Expect = 4e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 223 aaaatgtagtttactgtggggttgaagttcttcagtataaagaaggaagcaacaataacc 164 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | ||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 163 agaaccagg-aacagagtgttgttatagaagatggagaatgttgtagcttcataatcagc 105 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| || Sbjct: 104 aacttcattcttcttccacaggattctttcgtctttctccttccgggacatcttcctatt 45 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcat 238 ||| ||||| ||||| ||||| ||||||||| | |||||||||| Sbjct: 44 atcagcttcagaaagctttcgagtcacttctttggaaacagcat 1
>ref|XM_516834.1| PREDICTED: Pan troglodytes similar to signal sequence receptor gamma subunit; translocon-associated protein gamma subunit; TRAP-gamma; SSR-gamma; TRAP-complex gamma subunit (LOC460799), mRNA Length = 778 Score = 204 bits (103), Expect = 2e-49 Identities = 326/399 (81%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 ||||||||||| || ||||||||||||||||||| || ||||| ||||||||||| ||| Sbjct: 571 aaaatgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgacc 512 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | |||||| || || || ||||| ||||| ||||| ||||| || || ||||| ||||| Sbjct: 511 acgaccagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagc 453 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| | ||| |||||||||||||| || || |||||||| | || Sbjct: 452 aacttcattcttcttccacaagattctttcatctttctccttccgagacatctttctatt 393 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 392 atcagcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgc 333 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 || ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| Sbjct: 332 tactttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgct 273 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | Sbjct: 272 tactagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcg 213 Query: 375 ccaatacagccaaataggaattgcagacacgatgaaagc 413 ||| || | ||| || || || ||||||||||||||||| Sbjct: 212 ccagtataaccagatggggatggcagacacgatgaaagc 174
>emb|CR858334.1| Pongo pygmaeus mRNA; cDNA DKFZp459D2330 (from clone DKFZp459D2330) Length = 2539 Score = 198 bits (100), Expect = 1e-47 Identities = 323/396 (81%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 ||||||||||| || ||||||||||||||||||| || ||||| ||||||||||| ||| Sbjct: 569 aaaatgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgacc 510 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 | |||||| || || || ||||| ||||| ||||| ||||| || || ||||| ||||| Sbjct: 509 acgaccagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagc 451 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| | ||| |||||||||||||| || || |||||||| | || Sbjct: 450 aacttcattcttcttccacaagattctttcatctttctccttccgagacatctttctatt 391 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || Sbjct: 390 atcagcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgc 331 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 || ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| Sbjct: 330 tactttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgct 271 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | Sbjct: 270 tactagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcg 211 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 ||| || | ||| || || || |||||||||||||| Sbjct: 210 ccagtataaccagatggggatggcagacacgatgaa 175
>gb|BC017203.1| Homo sapiens signal sequence receptor, gamma (translocon-associated protein gamma), mRNA (cDNA clone MGC:3501 IMAGE:3618589), complete cds Length = 2426 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 557 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 498 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 497 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 439 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 438 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 379 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 378 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 319 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 318 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 259 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 258 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 199 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 198 gtataaccagatggggatggcagacacgatgaa 166
>ref|NM_007107.2| Homo sapiens signal sequence receptor, gamma (translocon-associated protein gamma) (SSR3), mRNA Length = 3067 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 557 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 498 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 497 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 439 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 438 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 379 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 378 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 319 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 318 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 259 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 258 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 199 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 198 gtataaccagatggggatggcagacacgatgaa 166
>gb|AF087907.1| Homo sapiens SSR gamma mRNA, complete cds Length = 823 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 559 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 500 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 499 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 441 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 440 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 381 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 380 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 321 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 320 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 261 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 260 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 201 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 200 gtataaccagatggggatggcagacacgatgaa 168
>gb|BT007582.1| Synthetic construct Homo sapiens signal sequence receptor, gamma (translocon-associated protein gamma) mRNA, partial cds Length = 558 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 500 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 441 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 440 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 382 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 381 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 322 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 321 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 262 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 261 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 202 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 201 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 142 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 141 gtataaccagatggggatggcagacacgatgaa 109
>gb|BT006669.1| Homo sapiens signal sequence receptor, gamma (translocon-associated protein gamma) mRNA, complete cds Length = 558 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 500 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 441 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 440 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 382 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 381 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 322 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 321 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 262 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 261 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 202 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 201 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 142 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 141 gtataaccagatggggatggcagacacgatgaa 109
>emb|CR624148.1| full-length cDNA clone CS0DL010YO20 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1055 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 488 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 429 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 428 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 370 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 369 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 310 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 309 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 250 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 249 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 190 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 189 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 130 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 129 gtataaccagatggggatggcagacacgatgaa 97
>emb|CR597465.1| full-length cDNA clone CS0DF013YL18 of Fetal brain of Homo sapiens (human) Length = 793 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 536 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 477 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 476 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 418 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 417 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 358 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 357 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 298 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 297 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 238 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 237 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 178 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 177 gtataaccagatggggatggcagacacgatgaa 145
>gb|AY892805.1| Synthetic construct Homo sapiens clone FLH024363.01L signal sequence receptor gamma (SSR3) mRNA, partial cds Length = 558 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 500 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 441 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 440 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 382 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 381 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 322 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 321 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 262 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 261 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 202 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 201 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 142 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 141 gtataaccagatggggatggcagacacgatgaa 109
>gb|AY890333.1| Synthetic construct Homo sapiens clone FLH024368.01X signal sequence receptor gamma (SSR3) mRNA, complete cds Length = 558 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 500 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 441 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 440 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 382 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 381 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 322 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 321 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 262 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 261 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 202 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 201 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 142 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 141 gtataaccagatggggatggcagacacgatgaa 109
>gb|AY890332.1| Synthetic construct Homo sapiens clone FLH024367.01X signal sequence receptor gamma (SSR3) mRNA, complete cds Length = 558 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 500 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 441 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 440 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 382 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 381 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 322 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 321 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 262 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 261 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 202 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 201 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 142 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 141 gtataaccagatggggatggcagacacgatgaa 109
>gb|AF110647.1|AF110647 Homo sapiens translocon-associated protein gamma subunit mRNA, complete cds Length = 3061 Score = 192 bits (97), Expect = 7e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 556 atgtagttcactgtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacg 497 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || || || ||||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 496 accagg-aacagagtgttgttatagaagatggaaaatgttgtagcttcataatcagcaac 438 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 |||||| |||||||| | ||| |||||||||||||| || || |||||||| | ||||| Sbjct: 437 ttcattcttcttccacaagattctttcatctttctccttccgagacatctttctattatc 378 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 ||||| ||||||||||| ||||||||| | ||||||||||| || | ||||| || || Sbjct: 377 agcttcagaaagttttcgagtcacttctttggaaacagcatcctccctcttctgtgctac 318 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||| ||||| |||||||| ||||||||||||||||| || || | || ||||| || Sbjct: 317 tttgtgcttgagaacaaatttcacattcttgtatgcaaaggctaccaaatatgtgcttac 258 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| || ||| || ||||| ||||| | ||||||||| |||||||| | ||| Sbjct: 257 tagggtcatcacactatacaaaacagcagactgaataagatccatatgccatattcgcca 198 Query: 378 atacagccaaataggaattgcagacacgatgaa 410 || | ||| || || || |||||||||||||| Sbjct: 197 gtataaccagatggggatggcagacacgatgaa 165
>gb|AY610158.1| Sus scrofa clone Clu_816.scr.msk.p1.Contig6, mRNA sequence Length = 1181 Score = 192 bits (97), Expect = 7e-46 Identities = 322/396 (81%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 ||||||||||| || ||||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 572 aaaatgtagttcactgtggggttgaagttcttcaatataaagaaggaggcaacaatgacc 513 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 || ||||| || || || ||||| ||||| ||||| ||||| || || ||||| ||||| Sbjct: 512 aagaccag-aaatagggtgttgttatagaagatggaaaatgttgtagcttcataatcagc 454 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| | ||| ||||||||||| || || ||||||||||| | || Sbjct: 453 aacttcattcttcttccacaagattctttcatctttttccttccgggacatctttctatt 394 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| ||||||||||| || |||||| | |||||||||||||| | ||||| || Sbjct: 393 atcggcttcagaaagttttcgagttacttctttggaaacagcatcttccctcttctgtgc 334 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 || ||||| ||||| ||||| || ||||| ||||||||||| || || | ||||||||| Sbjct: 333 tactttgtgcttgagaacaaacttcacatttttgtatgcaaaggctaccaagtaagtgct 274 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || || ||||| || ||| | ||||| ||||| | ||| ||||| |||||||| | Sbjct: 273 tactagggtcatcacactatacagaacagcagactgaataaggtccatatgccatattcg 214 Query: 375 ccaatacagccaaataggaattgcagacacgatgaa 410 |||||| | ||| || ||||| || ||||||||||| Sbjct: 213 ccaatataaccagatgggaatggcggacacgatgaa 178
>ref|XM_422829.1| PREDICTED: Gallus gallus similar to TRAP-complex gamma subunit (LOC425027), mRNA Length = 1054 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 548 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 489 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 488 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 430 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 429 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 370 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | |||||||||||||| | ||||| || ||||| Sbjct: 369 ctcagaaagcttgcgagtaacttctttggaaacagcatcttctctcttctgtgctacctt 310 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 309 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 250 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 249 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 190 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 189 gagccagatggggatggcagagacgatgaaggcgttgcc 151
>emb|BX935248.2| Gallus gallus finished cDNA, clone ChEST952j18 Length = 932 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 533 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 474 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 473 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 415 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 414 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 355 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | |||||||||||||| | ||||| || ||||| Sbjct: 354 ctcagaaagcttgcgagtaacttctttggaaacagcatcttctctcttctgtgctacctt 295 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 294 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 235 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 234 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 175 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 174 gagccagatggggatggcagagacgatgaaggcgttgcc 136
>emb|BX936255.1| Gallus gallus finished cDNA, clone ChEST958p17 Length = 905 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 527 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 468 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 467 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 409 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 408 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 349 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | |||||||||||||| | ||||| || ||||| Sbjct: 348 ctcagaaagcttgcgagtaacttctttggaaacagcatcttctctcttctgtgctacctt 289 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 288 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 229 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 228 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 169 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 168 gagccagatggggatggcagagacgatgaaggcgttgcc 130
>emb|BX936220.1| Gallus gallus finished cDNA, clone ChEST953c4 Length = 906 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 511 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 452 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 451 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 393 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 392 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 333 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | |||||||||||||| | ||||| || ||||| Sbjct: 332 ctcagaaagcttgcgagtaacttctttggaaacagcatcttctctcttctgtgctacctt 273 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 272 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 213 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 212 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 153 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 152 gagccagatggggatggcagagacgatgaaggcgttgcc 114
>emb|BX935333.1| Gallus gallus finished cDNA, clone ChEST950d16 Length = 905 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 527 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 468 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 467 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 409 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 408 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 349 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | |||||||||||||| | ||||| || ||||| Sbjct: 348 ctcagaaagcttgcgagtaacttctttggaaacagcatcttctctcttctgtgctacctt 289 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 288 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 229 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 228 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 169 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 168 gagccagatggggatggcagagacgatgaaggcgttgcc 130
>emb|BX935261.1| Gallus gallus finished cDNA, clone ChEST958c19 Length = 943 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 548 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 489 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 488 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 430 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 |||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 429 atttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 370 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | ||||| |||||||| | ||||| || ||||| Sbjct: 369 ctcagaaagcttgcgagtaacttctttggaaacggcatcttctctcttctgtgctacctt 310 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 309 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 250 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 249 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 190 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 189 gagccagatggggatggcagagacgatgaaggcgttgcc 151
>emb|BX935252.1| Gallus gallus finished cDNA, clone ChEST958i4 Length = 1032 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 511 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 452 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 451 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 393 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 392 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 333 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | |||||||||||||| | ||||| || ||||| Sbjct: 332 ctcagaaagcttgcgagtaacttctttggaaacagcatcttctctcttctgtgctacctt 273 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 272 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 213 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 212 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 153 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 152 gagccagatggggatggcagagacgatgaaggcgttgcc 114
>emb|BX935792.1| Gallus gallus finished cDNA, clone ChEST164n9 Length = 1073 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 549 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 490 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 489 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 431 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 |||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 430 atttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 371 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | ||||| |||||||| | ||||| || ||||| Sbjct: 370 ctcagaaagcttgcgagtaacttctttggaaacggcatcttctctcttctgtgctacctt 311 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 310 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 251 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 250 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 191 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 190 gagccagatggggatggcagagacgatgaaggcgttgcc 152
>emb|BX935245.1| Gallus gallus finished cDNA, clone ChEST952k24 Length = 1030 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 524 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 465 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 464 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 406 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 405 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 346 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | |||||||||||||| | ||||| || ||||| Sbjct: 345 ctcagaaagcttgcgagtaacttctttggaaacagcatcttctctcttctgtgctacctt 286 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 285 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 226 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 225 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 166 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 165 gagccagatggggatggcagagacgatgaaggcgttgcc 127
>emb|BX935222.1| Gallus gallus finished cDNA, clone ChEST954m13 Length = 903 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 508 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 449 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 448 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 390 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 389 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 330 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | |||||||||||||| | ||||| || ||||| Sbjct: 329 ctcagaaagcttgcgagtaacttctttggaaacagcatcttctctcttctgtgctacctt 270 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 269 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 210 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 209 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 150 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 149 gagccagatggggatggcagagacgatgaaggcgttgcc 111
>emb|BX933663.1| Gallus gallus finished cDNA, clone ChEST949p15 Length = 943 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 548 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 489 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 488 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 430 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 |||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 429 atttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 370 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | ||||| |||||||| | ||||| || ||||| Sbjct: 369 ctcagaaagcttgcgagtaacttctttggaaacggcatcttctctcttctgtgctacctt 310 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 309 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 250 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 249 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 190 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 189 gagccagatggggatggcagagacgatgaaggcgttgcc 151
>emb|BX933619.1| Gallus gallus finished cDNA, clone ChEST947j8 Length = 877 Score = 174 bits (88), Expect = 2e-40 Identities = 322/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 501 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 442 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 441 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 383 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 382 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 323 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | |||||||||||||| | ||||| || ||||| Sbjct: 322 ctcagaaagcttgcgagtaacttctttggaaacagcatcttctctcttctgtgctacctt 263 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 262 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 203 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 202 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 143 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 142 gagccagatggggatggcagagacgatgaaggcgttgcc 104
>gb|DQ214100.1| Taeniopygia guttata clone 0064P0016F04 signal sequence receptor gamma-like mRNA, complete sequence Length = 949 Score = 172 bits (87), Expect = 6e-40 Identities = 324/402 (80%), Gaps = 1/402 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 ||||||||||| |||||||||||||||||||| | ||| || ||||| | || |||| Sbjct: 542 atgtagtttacagtggggttgaagttcttcagcacaaaaaaggaagcgatgataaccagg 483 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 ||||| || || || ||||||||||| |||||||| || |||||||| ||||| ||||| Sbjct: 482 accag-aaagagagtgttgttgtagaagatggagaaagttgttgcctcgtagtctgcaac 424 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 ||||||||||||||| || ||||||||||| ||||| || ||||||||||||| ||| || Sbjct: 423 ttcatttttcttccacagaatcctttcatccttctccttgcgggacatcttcctgttgtc 364 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 || || || || || || ||||| || | |||||||||||||| | |||||| || || Sbjct: 363 cgcctcggacagcttgcgagtcacctccttggaaacagcatcttctcttttctgggctac 304 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||||||||||||||| || || || || |||||||||||||| || || || |||| Sbjct: 303 tttgtgtttgaggacaaacttgacgtttttatatgcaaaagccacgagataggtactgat 244 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| ||| || | || || ||||| ||||||||||| |||||||| ||||| Sbjct: 243 gagggtcatgacgctgtacaggactgcagactgaacaagatccatatgccatattctcca 184 Query: 378 atacagccaaataggaattgcagacacgatgaaagcattgcc 419 || ||||| || || || || || |||||||| || ||||| Sbjct: 183 gtaaagccagatggggatggcggagacgatgaaggcgttgcc 142
>ref|NM_200053.1| Danio rerio signal sequence receptor, gamma (ssr3), mRNA Length = 852 Score = 170 bits (86), Expect = 2e-39 Identities = 293/361 (81%), Gaps = 1/361 (0%) Strand = Plus / Minus Query: 17 aatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaa 76 ||||||||| || || ||||||||||||||||| | ||||||||| ||||| || || | Sbjct: 514 aatgtagttcactgttgggttgaagttcttcagcagaaagaaagaggcaacgatgacgag 455 Query: 77 aaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaa 136 | ||| || || || ||||||||||| |||||||| ||||||||||| || || || | Sbjct: 454 caacag-aaacagagtgttgttgtagaagatggagaaagtggttgcctcgtaatccgcca 396 Query: 137 cttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttat 196 | ||||| |||||||| |||||||| ||||| ||||| || || ||||| || ||||| | Sbjct: 395 cctcattcttcttccacaggatcctctcatccttctccttgcgagacattttgcggttgt 336 Query: 197 ctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgcca 256 | || || ||||| || || |||||||| | || ||||||||||| |||||||| || | Sbjct: 335 cagcctcagaaagcttgcgagtcacttcctttgatacagcatcttctcgtttctgagcga 276 Query: 257 ccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctga 316 ||||||| ||||| |||||||| ||||||||||| ||||| || || ||||| ||||||| Sbjct: 275 ccttgtgcttgagaacaaatttgacattcttgtaagcaaaggcgaccaggtaggtgctga 216 Query: 317 ccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcc 376 ||| ||||| || ||||| | ||| || ||||| || || ||||| ||||| ||||||| Sbjct: 215 ccaaagtcatgactgcatacagcactgcagactgaaccaggtccatatgccagatcctcc 156 Query: 377 a 377 | Sbjct: 155 a 155
>gb|BC047859.1| Danio rerio signal sequence receptor, gamma, mRNA (cDNA clone MGC:56300 IMAGE:5603039), complete cds Length = 852 Score = 170 bits (86), Expect = 2e-39 Identities = 293/361 (81%), Gaps = 1/361 (0%) Strand = Plus / Minus Query: 17 aatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaa 76 ||||||||| || || ||||||||||||||||| | ||||||||| ||||| || || | Sbjct: 514 aatgtagttcactgttgggttgaagttcttcagcagaaagaaagaggcaacgatgacgag 455 Query: 77 aaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaa 136 | ||| || || || ||||||||||| |||||||| ||||||||||| || || || | Sbjct: 454 caacag-aaacagagtgttgttgtagaagatggagaaagtggttgcctcgtaatccgcca 396 Query: 137 cttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttat 196 | ||||| |||||||| |||||||| ||||| ||||| || || ||||| || ||||| | Sbjct: 395 cctcattcttcttccacaggatcctctcatccttctccttgcgagacattttgcggttgt 336 Query: 197 ctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgcca 256 | || || ||||| || || |||||||| | || ||||||||||| |||||||| || | Sbjct: 335 cagcctcagaaagcttgcgagtcacttcctttgatacagcatcttctcgtttctgagcga 276 Query: 257 ccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctga 316 ||||||| ||||| |||||||| ||||||||||| ||||| || || ||||| ||||||| Sbjct: 275 ccttgtgcttgagaacaaatttgacattcttgtaagcaaaggcgaccaggtaggtgctga 216 Query: 317 ccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcc 376 ||| ||||| || ||||| | ||| || ||||| || || ||||| ||||| ||||||| Sbjct: 215 ccaaagtcatgactgcatacagcactgcagactgaaccaggtccatatgccagatcctcc 156 Query: 377 a 377 | Sbjct: 155 a 155
>emb|BX934097.1| Gallus gallus finished cDNA, clone ChEST60l9 Length = 1096 Score = 167 bits (84), Expect = 4e-38 Identities = 321/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 533 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 474 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 473 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 415 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 414 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 355 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | ||||| |||||||| | ||||| || ||||| Sbjct: 354 ctcagaaagcttgcgagtaacttctttggaaacggcatcttctctcttctgtgctacctt 295 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 294 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 235 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 234 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 175 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 174 gagccagatggggatggcagagacgatgaaggcgttgcc 136
>emb|BX932955.1| Gallus gallus finished cDNA, clone ChEST914n22 Length = 1022 Score = 167 bits (84), Expect = 4e-38 Identities = 321/399 (80%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 21 tagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaacc 80 |||||||| |||||||||||||||||||| | ||| || ||||||| || |||| ||| Sbjct: 501 tagtttacagtggggttgaagttcttcagcacaaaaaatgaagcaatgatgaccaggacc 442 Query: 81 aggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttc 140 || || || |||||||||||||| ||||| || || ||||| ||||| || |||||||| Sbjct: 441 ag-aaagagagtattgttgtagaagatggaaaaggttgttgcttcataatctgcaacttc 383 Query: 141 atttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatctgc 200 ||||||||||| | ||||||||||| ||||| || || |||||||||| ||| ||||| Sbjct: 382 gtttttcttccataaaatcctttcatccttctccttccgagacatcttcctgttgtctgc 323 Query: 201 ttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccacctt 260 || ||||| || || || |||||| | ||||| |||||||| | ||||| || ||||| Sbjct: 322 ctcagaaagcttgcgagtaacttctttggaaacggcatcttctctcttctgtgctacctt 263 Query: 261 gtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccag 320 ||| |||||||| || || || ||||| || ||||| ||||| ||||| || |||| || Sbjct: 262 gtgcttgaggacgaacttgacgttcttatacgcaaacgccacgaggtaggtactgatgag 203 Query: 321 cgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctccaata 380 ||||| ||| || | ||| || ||||| || ||||||||||||||||||||||| || Sbjct: 202 ggtcatcacgctgtacagcacggcagactgaaccagatccatgtgccatatcctccagta 143 Query: 381 cagccaaataggaattgcagacacgatgaaagcattgcc 419 ||||| || || || ||||| |||||||| || ||||| Sbjct: 142 gagccagatggggatggcagagacgatgaaggcgttgcc 104
>gb|DQ214101.1| Taeniopygia guttata clone 0064P0017C09 signal sequence receptor gamma-like mRNA, complete sequence Length = 953 Score = 165 bits (83), Expect = 1e-37 Identities = 323/402 (80%), Gaps = 1/402 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 ||||||||||| |||||||||||||||||||| | || || ||||| | || |||| Sbjct: 548 atgtagtttacagtggggttgaagttcttcagcacgaaaaaggaagcgatgataaccagg 489 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 ||||| || || || ||||||||||| |||||||| || |||||||| ||||| ||||| Sbjct: 488 accag-aaagagagtgttgttgtagaagatggagaaagttgttgcctcgtagtctgcaac 430 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 ||||||||||||||| || ||||||||||| ||||| || ||||||||||||| ||| || Sbjct: 429 ttcatttttcttccacagaatcctttcatccttctccttgcgggacatcttcctgttgtc 370 Query: 198 tgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgccac 257 || || || || || || ||||| || | |||||||||||||| | |||||| || || Sbjct: 369 cgcctcggacagcttgcgagtcacctccttggaaacagcatcttctcttttctgggctac 310 Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 ||||||||||||||||| || || || || |||||||||||||| || || || |||| Sbjct: 309 tttgtgtttgaggacaaacttgacgtttttatatgcaaaagccacgagataggtactgat 250 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 || ||||| ||| || | || || ||||| ||||||||||| |||||||| ||||| Sbjct: 249 gagggtcatgacgctgtacaggactgcagactgaacaagatccatatgccatattctcca 190 Query: 378 atacagccaaataggaattgcagacacgatgaaagcattgcc 419 || ||||| || || || || || |||||||| || ||||| Sbjct: 189 gtaaagccagatggggatggcggagacgatgaaggcgttgcc 148
>gb|BC103053.1| Bos taurus cDNA clone MGC:128109 IMAGE:7985312, complete cds Length = 850 Score = 157 bits (79), Expect = 4e-35 Identities = 295/366 (80%), Gaps = 1/366 (0%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 549 aaaatgtagttcactgtggggttgaagttcttcagtataaagaaggaagcaacaatgacc 490 Query: 75 aaaaccaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagc 134 || ||||| || || || || || ||||| ||||| ||||| || || ||||| ||||| Sbjct: 489 aagaccag-aaacagggtgttattatagaagatggaaaatgttgtagcttcataatcagc 431 Query: 135 aacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggtt 194 ||||||||| |||||||| | ||| |||||||| || || || || |||||||| | || Sbjct: 430 aacttcattcttcttccacaagattctttcatccttttccttccgagacatctttctatt 371 Query: 195 atctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcgc 254 ||| ||||| || ||||| || ||||||||| | || |||||||| || | ||||| || Sbjct: 370 atcagcttcagagagtttccgagtcacttctttggagacagcatcctccctcttctgtgc 311 Query: 255 caccttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgct 314 || ||||| ||||| |||||||| ||||| ||||| ||||| || || | ||||||||| Sbjct: 310 tactttgtgcttgagaacaaatttcacatttttgtaagcaaaggctaccaagtaagtgct 251 Query: 315 gaccagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcct 374 || || ||||| || ||| | ||||| ||||| | ||||||||| |||||||| | Sbjct: 250 tactagggtcatcacactatacagaacagcagactgaataagatccatatgccatattcg 191 Query: 375 ccaata 380 |||||| Sbjct: 190 ccaata 185
>gb|DQ214102.1| Taeniopygia guttata clone 0065P0004F08 signal sequence receptor gamma-like mRNA, complete sequence Length = 929 Score = 155 bits (78), Expect = 1e-34 Identities = 264/326 (80%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 451 ttgttgtagaagatggagaaagttgttgcctcgtagtctgcaacttcatttttcttccac 392 Query: 154 aggatcctttcatctttctcttttcgggacatcttccggttatctgcttctgaaagtttt 213 || ||||||||||| ||||| || ||||||||||||| ||| || || || || || || Sbjct: 391 agaatcctttcatccttctccttgcgggacatcttcctgttgtccgcctcggacagcttg 332 Query: 214 cgcgtcacttctctagaaacagcatcttcacgtttctgcgccaccttgtgtttgaggaca 273 || ||||| || | |||||||||||||| | |||||| || || ||||||||||||||| Sbjct: 331 cgagtcacctccttggaaacagcatcttctcttttctgggctactttgtgtttgaggaca 272 Query: 274 aatttaacattcttgtatgcaaaagccacaaggtaagtgctgaccagcgtcattacggca 333 || || || || || |||||||||||||| || || || |||| || ||||| ||| Sbjct: 271 aacttgacgtttttatatgcaaaagccacgagataggtactgatgagggtcatgacgctg 212 Query: 334 tataacacagccgactgcacaagatccatgtgccatatcctccaatacagccaaatagga 393 || | || || ||||| ||||||||||| |||||||| ||||| || ||||| || || Sbjct: 211 tacaggactgcagactgaacaagatccatatgccatattctccagtaaagccagatgggg 152 Query: 394 attgcagacacgatgaaagcattgcc 419 || || || |||||||| || ||||| Sbjct: 151 atggcggagacgatgaaggcgttgcc 126 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcag 49 ||||||||||| |||||||||||||||||||| Sbjct: 526 atgtagtttacagtggggttgaagttcttcag 495
>ref|XM_847750.1| PREDICTED: Canis familiaris similar to signal sequence receptor, gamma (LOC610287), mRNA Length = 727 Score = 149 bits (75), Expect = 9e-33 Identities = 180/215 (83%) Strand = Plus / Minus Query: 100 tagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaaaggatc 159 ||||| ||||| ||||| || || ||||| |||||||||||||| |||||||| | || Sbjct: 377 tagaagatggaaaatgttgtagcttcataatcagcaacttcattcttcttccacaaaatt 318 Query: 160 ctttcatctttctcttttcgggacatcttccggttatctgcttctgaaagttttcgcgtc 219 ||||||||||| || ||||| |||||||| | |||||| ||||| || |||||||| ||| Sbjct: 317 ctttcatctttttcctttcgagacatctttctgttatcagcttcagagagttttcgagtc 258 Query: 220 acttctctagaaacagcatcttcacgtttctgcgccaccttgtgtttgaggacaaattta 279 |||||| | ||||||||||| || | ||||| || || ||||||||||| |||||||| Sbjct: 257 acttctttggaaacagcatcctccctcttctgtgctactttgtgtttgagaacaaatttc 198 Query: 280 acattcttgtatgcaaaagccacaaggtaagtgct 314 || || |||||||| |||||||| ||||||||||| Sbjct: 197 acgtttttgtatgcgaaagccaccaggtaagtgct 163 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 ||||| ||||| || || |||||||||||||||| |||||||| | |||||||| ||| Sbjct: 463 aaaatatagttcaccgttgggttgaagttcttcaatataaagaagaaggcaacaatgacc 404 Query: 75 aaaaccagg 83 || |||||| Sbjct: 403 aagaccagg 395
>ref|XM_843338.1| PREDICTED: Canis familiaris similar to signal sequence receptor, gamma (LOC606868), mRNA Length = 727 Score = 149 bits (75), Expect = 9e-33 Identities = 180/215 (83%) Strand = Plus / Minus Query: 100 tagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaaaggatc 159 ||||| ||||| ||||| || || ||||| |||||||||||||| |||||||| | || Sbjct: 377 tagaagatggaaaatgttgtagcttcataatcagcaacttcattcttcttccacaaaatt 318 Query: 160 ctttcatctttctcttttcgggacatcttccggttatctgcttctgaaagttttcgcgtc 219 ||||||||||| || ||||| |||||||| | |||||| ||||| || |||||||| ||| Sbjct: 317 ctttcatctttttcctttcgagacatctttctgttatcagcttcagagagttttcgagtc 258 Query: 220 acttctctagaaacagcatcttcacgtttctgcgccaccttgtgtttgaggacaaattta 279 |||||| | ||||||||||| || | ||||| || || ||||||||||| |||||||| Sbjct: 257 acttctttggaaacagcatcctccctcttctgtgctactttgtgtttgagaacaaatttc 198 Query: 280 acattcttgtatgcaaaagccacaaggtaagtgct 314 || || |||||||| |||||||| ||||||||||| Sbjct: 197 acgtttttgtatgcgaaagccaccaggtaagtgct 163 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 ||||| ||||| || || |||||||||||||||| |||||||| | |||||||| ||| Sbjct: 463 aaaatatagttcaccgttgggttgaagttcttcaatataaagaagaaggcaacaatgacc 404 Query: 75 aaaaccagg 83 || |||||| Sbjct: 403 aagaccagg 395
>gb|AC093118.2| Homo sapiens chromosome 1 clone RP11-156K6, complete sequence Length = 142816 Score = 141 bits (71), Expect = 2e-30 Identities = 233/283 (82%), Gaps = 3/283 (1%) Strand = Plus / Minus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 ||||||||||| || ||||||||||||||||||| || ||||| ||||||| ||| ||| Sbjct: 83384 aaaatgtagttcactgtggggttgaagttcttcaaaacgaagaa-gaagcaaaaatgacc 83326 Query: 75 aaaaccaggnaaaagtgtattgttg-tagaaaatggagaatgtggttgcctcatagtcag 133 || | |||| || || || ||||| ||||||||||| ||||| || || ||| | |||| Sbjct: 83325 aagaacagg-aacagagtgttgttaatagaaaatggaaaatgttgtagcttcagaatcag 83267 Query: 134 caacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggt 193 |||||||||| |||||||| | ||| ||| |||||||||| || || |||||| | | | Sbjct: 83266 caacttcattcttcttccacaagattcttacatctttctccttccgagacatccttctat 83207 Query: 194 tatctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcg 253 |||| ||||| |||||||||| ||||||||| | ||||||| ||| || | ||||| | Sbjct: 83206 tatcagcttcagaaagttttctagtcacttctttggaaacagtatcctccctcttctgtg 83147 Query: 254 ccaccttgtgtttgaggacaaatttaacattcttgtatgcaaa 296 | || ||||| ||||| |||||||||||||||||||||||||| Sbjct: 83146 ctactttgtgcttgagaacaaatttaacattcttgtatgcaaa 83104
>gb|AC103591.3| Homo sapiens chromosome 1 clone RP11-386I14, complete sequence Length = 152117 Score = 141 bits (71), Expect = 2e-30 Identities = 233/283 (82%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 15 aaaatgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcacc 74 ||||||||||| || ||||||||||||||||||| || ||||| ||||||| ||| ||| Sbjct: 276 aaaatgtagttcactgtggggttgaagttcttcaaaacgaagaa-gaagcaaaaatgacc 334 Query: 75 aaaaccaggnaaaagtgtattgttg-tagaaaatggagaatgtggttgcctcatagtcag 133 || | |||| || || || ||||| ||||||||||| ||||| || || ||| | |||| Sbjct: 335 aagaacagg-aacagagtgttgttaatagaaaatggaaaatgttgtagcttcagaatcag 393 Query: 134 caacttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggt 193 |||||||||| |||||||| | ||| ||| |||||||||| || || |||||| | | | Sbjct: 394 caacttcattcttcttccacaagattcttacatctttctccttccgagacatccttctat 453 Query: 194 tatctgcttctgaaagttttcgcgtcacttctctagaaacagcatcttcacgtttctgcg 253 |||| ||||| |||||||||| ||||||||| | ||||||| ||| || | ||||| | Sbjct: 454 tatcagcttcagaaagttttctagtcacttctttggaaacagtatcctccctcttctgtg 513 Query: 254 ccaccttgtgtttgaggacaaatttaacattcttgtatgcaaa 296 | || ||||| ||||| |||||||||||||||||||||||||| Sbjct: 514 ctactttgtgcttgagaacaaatttaacattcttgtatgcaaa 556
>gb|AC113279.7| Mus musculus chromosome 3, clone RP23-389J8, complete sequence Length = 198009 Score = 121 bits (61), Expect = 2e-24 Identities = 113/129 (87%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 30 gtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaaccaggnaaaag 89 |||||||||||||||||||| |||||||| ||||||||||| |||| ||||||| || || Sbjct: 12345 gtggggttgaagttcttcagtataaagaaggaagcaacaataaccagaaccagg-aacag 12403 Query: 90 tgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttctt 149 || ||||| ||||| ||||||||||| || || ||||| |||||||||||||| ||||| Sbjct: 12404 agtgttgttatagaagatggagaatgttgtagcttcataatcagcaacttcattcttctt 12463 Query: 150 ccaaaggat 158 ||| ||||| Sbjct: 12464 ccacaggat 12472 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 159 cctttcatctttctcttttcgggacatcttccggttatctgcttctgaaagttttcgcgt 218 |||||| |||||||| || ||||||||||||| ||||| ||||| ||||| ||||| || Sbjct: 17081 cctttcgtctttctccttccgggacatcttcctattatcagcttcagaaagctttcgagt 17140 Query: 219 cacttctctagaaacagcatc 239 ||||||| | ||||||||||| Sbjct: 17141 cacttctttggaaacagcatc 17161
>emb|CR687789.2|CNS0FTND Tetraodon nigroviridis full-length cDNA Length = 481 Score = 115 bits (58), Expect = 1e-22 Identities = 155/186 (83%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| |||||||||||||||||||| || | ||||| || || || || |||| Sbjct: 240 atgtagttcacggtggggttgaagttcttgagcaggaagaaggaggccacgatgaccagc 181 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || ||||| ||||||||||| || ||||| ||||| ||||| ||||| ||||| Sbjct: 180 accagg-aagagtgtgttgttgtagaagattgagaaggtggtggcctcgtagtcggcaac 122 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 ||||| |||||||| | ||||||||| |||||||| || ||||||||||| ||||| || Sbjct: 121 ctcattcttcttccacaagatcctttcgtctttctccttgcgggacatcttgcggttgtc 62 Query: 198 tgcttc 203 ||||| Sbjct: 61 agcttc 56
>emb|CR652817.2|CNS0F2ON Tetraodon nigroviridis full-length cDNA Length = 474 Score = 115 bits (58), Expect = 1e-22 Identities = 155/186 (83%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 18 atgtagtttacggtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaa 77 |||||||| |||||||||||||||||||| || | ||||| || || || || |||| Sbjct: 240 atgtagttcacggtggggttgaagttcttgagcaggaagaaggaggccacgatgaccagc 181 Query: 78 accaggnaaaagtgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaac 137 |||||| || ||||| ||||||||||| || ||||| ||||| ||||| ||||| ||||| Sbjct: 180 accagg-aagagtgtgttgttgtagaagattgagaaggtggtggcctcgtagtcggcaac 122 Query: 138 ttcatttttcttccaaaggatcctttcatctttctcttttcgggacatcttccggttatc 197 ||||| |||||||| | ||||||||| |||||||| || ||||||||||| ||||| || Sbjct: 121 ctcattcttcttccacaagatcctttcgtctttctccttgcgggacatcttgcggttgtc 62 Query: 198 tgcttc 203 ||||| Sbjct: 61 agcttc 56
>dbj|AK206034.1| Mus musculus cDNA, clone:Y2G0103I22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029414, based on BLAT search Length = 278 Score = 97.6 bits (49), Expect = 3e-17 Identities = 187/233 (80%) Strand = Plus / Minus Query: 178 cgggacatcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacagca 237 ||||||||||||| ||||| ||||| ||||| ||||| ||||||||| | ||||||||| Sbjct: 278 cgggacatcttcctattatcagcttcagaaagctttcgagtcacttctttggaaacagca 219 Query: 238 tcttcacgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaa 297 || || | ||||| ||||| ||||| || || |||||||| ||||||||||| || || Sbjct: 218 tcctccctcttctgtgccactttgtgcttcagaacaaattttacattcttgtacgcgaag 159 Query: 298 gccacaaggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaaga 357 || || | ||||||||| || | ||||| || || | |||||| ||||| | ||| Sbjct: 158 gctaccaagtaagtgcttactaaggtcatcacactgtagagcacagcagactggatgaga 99 Query: 358 tccatgtgccatatcctccaatacagccaaataggaattgcagacacgatgaa 410 ||||| |||||||| |||||||||| ||| || || || |||||||||||||| Sbjct: 98 tccatatgccatattctccaatacaaccagatggggatggcagacacgatgaa 46
>dbj|AK194871.1| Mus musculus cDNA, clone:Y1G0116K24, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029414, based on BLAT search Length = 278 Score = 97.6 bits (49), Expect = 3e-17 Identities = 187/233 (80%) Strand = Plus / Minus Query: 178 cgggacatcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacagca 237 ||||||||||||| ||||| ||||| ||||| ||||| ||||||||| | ||||||||| Sbjct: 278 cgggacatcttcctattatcagcttcagaaagctttcgagtcacttctttggaaacagca 219 Query: 238 tcttcacgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaa 297 || || | ||||| ||||| ||||| || || |||||||| ||||||||||| || || Sbjct: 218 tcctccctcttctgtgccactttgtgcttcagaacaaattttacattcttgtacgcgaag 159 Query: 298 gccacaaggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaaga 357 || || | ||||||||| || | ||||| || || | |||||| ||||| | ||| Sbjct: 158 gctactaagtaagtgcttactaaggtcatcacactgtagagcacagcagactggatgaga 99 Query: 358 tccatgtgccatatcctccaatacagccaaataggaattgcagacacgatgaa 410 ||||| |||||||| |||||||||| ||| || || || |||||||||||||| Sbjct: 98 tccatatgccatattctccaatacaaccagatggggatggcagacacgatgaa 46
>dbj|AK192841.1| Mus musculus cDNA, clone:Y1G0110B20, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029414, based on BLAT search Length = 278 Score = 97.6 bits (49), Expect = 3e-17 Identities = 187/233 (80%) Strand = Plus / Minus Query: 178 cgggacatcttccggttatctgcttctgaaagttttcgcgtcacttctctagaaacagca 237 ||||||||||||| ||||| ||||| ||||| ||||| ||||||||| | ||||||||| Sbjct: 278 cgggacatcttcctattatcagcttcagaaagctttcgagtcacttctttggaaacagca 219 Query: 238 tcttcacgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaaa 297 || || | ||||| ||||| ||||| || || |||||||| ||||||||||| || || Sbjct: 218 tcctccctcttctgtgccactttgtgcttcagaacaaattttacattcttgtacgcgaag 159 Query: 298 gccacaaggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaaga 357 || || | ||||||||| || | ||||| || || | |||||| ||||| | ||| Sbjct: 158 gctactaagtaagtgcttactaaggtcatcacactgtagagcacagcagactggatgaga 99 Query: 358 tccatgtgccatatcctccaatacagccaaataggaattgcagacacgatgaa 410 ||||| |||||||| |||||||||| ||| || || || |||||||||||||| Sbjct: 98 tccatatgccatattctccaatacaaccagatggggatggcagacacgatgaa 46
>ref|XM_524746.1| PREDICTED: Pan troglodytes similar to PDZ domain protein GIPC2 (LOC469361), mRNA Length = 1122 Score = 87.7 bits (44), Expect = 3e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 165 atctttctcttttcgggacatcttccggttatctgcttctgaaagttttcgcgtcacttc 224 ||||||||| || || |||||||| | ||||| ||||| |||||||||| |||||||| Sbjct: 519 atctttctccttccgagacatctttctattatcagcttcagaaagttttctagtcacttc 460 Query: 225 tctagaaacagcatcttcacgtttctgcgccaccttgtgtttgaggacaaatttaacatt 284 | | ||||||| ||| || | ||||| || || ||||| ||||| |||||||||||||| Sbjct: 459 tttggaaacagtatcctccctcttctgtgctactttgtgcttgagaacaaatttaacatt 400 Query: 285 cttgtatgcaaa 296 |||||||||||| Sbjct: 399 cttgtatgcaaa 388
>gb|AC092927.5| Homo sapiens 3 BAC RP11-791I24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179542 Score = 85.7 bits (43), Expect = 1e-13 Identities = 104/123 (84%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 30 gtggggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaaccaggnaaaag 89 ||||||||||||||||||| || ||||| ||||||||||| |||| |||||| || || Sbjct: 162042 gtggggttgaagttcttcaatatgaagaaggaagcaacaatgaccacgaccagg-aacag 161984 Query: 90 tgtattgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttctt 149 || ||||| ||||| ||||| ||||| || || ||||| |||||||||||||| ||||| Sbjct: 161983 agtgttgttatagaagatggaaaatgttgtagcttcataatcagcaacttcattcttctt 161924 Query: 150 cca 152 ||| Sbjct: 161923 cca 161921 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 159 cctttcatctttctcttttcgggacatcttccggttatctgcttctgaaagttttcgcgt 218 ||||||||||||||| || || |||||||| | ||||| ||||| ||||||||||| || Sbjct: 157449 cctttcatctttctccttccgagacatctttctattatcagcttcagaaagttttcgagt 157390 Query: 219 cacttctctagaaacagcatc 239 ||||||| | ||||||||||| Sbjct: 157389 cacttctttggaaacagcatc 157369 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaa 296 |||||| ||||| |||||||| ||||||||||||||||| Sbjct: 152699 cttgtgcttgagaacaaatttcacattcttgtatgcaaa 152661
>dbj|AK199053.1| Mus musculus cDNA, clone:Y1G0130A03, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029414, based on BLAT search Length = 279 Score = 83.8 bits (42), Expect = 4e-13 Identities = 187/234 (79%), Gaps = 1/234 (0%) Strand = Plus / Minus Query: 178 cgggacatcttccggttatctgcttctgaaagttttcgcg-tcacttctctagaaacagc 236 ||||||||||||| ||||| ||||| ||||| ||||| | |||||||| | |||||||| Sbjct: 279 cgggacatcttcctattatcagcttcagaaagctttcgaggtcacttctttggaaacagc 220 Query: 237 atcttcacgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgtatgcaaa 296 ||| || | ||||| ||||| ||||| || || |||||||| ||||||||||| || || Sbjct: 219 atcctccctcttctgtgccactttgtgcttcagaacaaattttacattcttgtacgcgaa 160 Query: 297 agccacaaggtaagtgctgaccagcgtcattacggcatataacacagccgactgcacaag 356 || || | ||||||||| || | ||||| || || | |||||| ||||| | || Sbjct: 159 ggctactaagtaagtgcttactaaggtcatcacactgtagagcacagcagactggatgag 100 Query: 357 atccatgtgccatatcctccaatacagccaaataggaattgcagacacgatgaa 410 |||||| |||||||| |||||||||| ||| || || || |||||||||||||| Sbjct: 99 atccatatgccatattctccaatacaaccagatggggatggcagacacgatgaa 46
>gb|AY608891.1| Branchiostoma belcheri tsingtaunese translocon-associated protein gamma (SSR) mRNA, partial cds Length = 863 Score = 79.8 bits (40), Expect = 7e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| || || ||||| ||||| ||||| || || |||||||| Sbjct: 409 ttgttgtagaagatggagaaggttgtggcctcgtagtccgcaacctcgttcttcttccac 350 Query: 154 aggatcctttcatctttctcttttcgggacatcttc 189 |||||||||||||| ||||| || || ||||||||| Sbjct: 349 aggatcctttcatccttctccttgcgagacatcttc 314
>emb|CR847802.11| Zebrafish DNA sequence from clone DKEY-48N1 in linkage group 18, complete sequence Length = 172545 Score = 79.8 bits (40), Expect = 7e-12 Identities = 100/120 (83%) Strand = Plus / Minus Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 |||||| ||||| |||||||| ||||||||||| ||||| || || ||||| |||||||| Sbjct: 132393 cttgtgcttgagaacaaatttgacattcttgtaagcaaaggcgaccaggtaggtgctgac 132334 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 ||| ||||| || ||||| | ||| || ||||| || || ||||| ||||| |||||||| Sbjct: 132333 cagagtcatgactgcatacagcactgcagactgaaccaggtccatatgccagatcctcca 132274 Score = 60.0 bits (30), Expect = 6e-06 Identities = 105/129 (81%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 33 gggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaaccaggnaaaagtgt 92 ||||||||||||||||| | ||||||||| ||||| || || | | ||| || || || Sbjct: 137967 gggttgaagttcttcagcagaaagaaagaggcaacgatgacgagcaacag-aaacagagt 137909 Query: 93 attgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttcca 152 ||||||||||| |||||||| ||||||||||| || || || || || || |||||||| Sbjct: 137908 gttgttgtagaagatggagaaagtggttgcctcgtaatccgccacctcgttcttcttcca 137849 Query: 153 aaggatcct 161 |||||||| Sbjct: 137848 caggatcct 137840
>emb|CR626922.13| Zebrafish DNA sequence from clone DKEY-33K14 in linkage group 18, complete sequence Length = 122627 Score = 79.8 bits (40), Expect = 7e-12 Identities = 100/120 (83%) Strand = Plus / Plus Query: 258 cttgtgtttgaggacaaatttaacattcttgtatgcaaaagccacaaggtaagtgctgac 317 |||||| ||||| |||||||| ||||||||||| ||||| || || ||||| |||||||| Sbjct: 64658 cttgtgcttgagaacaaatttgacattcttgtaagcaaaggcgaccaggtaggtgctgac 64717 Query: 318 cagcgtcattacggcatataacacagccgactgcacaagatccatgtgccatatcctcca 377 ||| ||||| || ||||| | ||| || ||||| || || ||||| ||||| |||||||| Sbjct: 64718 cagagtcatgactgcatacagcactgcagactgaaccaggtccatatgccagatcctcca 64777 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/129 (82%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 33 gggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaaccaggnaaaagtgt 92 ||||||||||||||||| | ||||||||| ||||| || || | | ||| || || || Sbjct: 59120 gggttgaagttcttcagcagaaagaaagaggcaacgatgacgagcaacag-aaacagagt 59178 Query: 93 attgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttcca 152 ||||||||||| |||||||| |||||||||||||| || || || ||||| |||||||| Sbjct: 59179 gttgttgtagaagatggagaaagtggttgcctcataatccgccacctcattcttcttcca 59238 Query: 153 aaggatcct 161 |||||||| Sbjct: 59239 caggatcct 59247
>gb|AY428035.1| Danio rerio trap-gamma gene noncoding downstream region Length = 370 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/129 (82%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 33 gggttgaagttcttcagaataaagaaagaagcaacaatcaccaaaaccaggnaaaagtgt 92 ||||||||||||||||| | ||||||||| ||||| || || | | ||| || || || Sbjct: 136 gggttgaagttcttcagcagaaagaaagaggcaacgatgacgagcaacag-aaacagagt 78 Query: 93 attgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttcca 152 ||||||||||| |||||||| |||||||||||||| || || || ||||| |||||||| Sbjct: 77 gttgttgtagaagatggagaaagtggttgcctcataatccgccacctcattcttcttcca 18 Query: 153 aaggatcct 161 |||||||| Sbjct: 17 caggatcct 9
>emb|CT032572.1| Platynereis dumerilii EST IB0AAA36BA11EM1 Length = 625 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttcca 152 |||||||||||||||||||||||||| || || || || || ||||| || |||||||| Sbjct: 418 ttgttgtagaaaatggagaatgtggtggcttcgtaatcggctacttcgttcttcttcca 360
>ref|XM_624671.1| PREDICTED: Apis mellifera similar to GA19202-PA (LOC552295), mRNA Length = 605 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 97 ttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaaagg 156 ||||| ||||| || ||||| ||||| ||||| ||||| ||||||||||| ||||| | Sbjct: 469 ttgtaaaaaattgaaaatgttgttgcttcataatcagctacttcattttttttccataaa 410 Query: 157 atcctttcatcttt 170 || ||||||||||| Sbjct: 409 attctttcatcttt 396
>dbj|AK201896.1| Mus musculus cDNA, clone:Y1G0139L10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029414, based on BLAT search Length = 279 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 178 cgggacatcttccggttatctgcttctgaaagt-tttcgcgtcacttctctagaaacagc 236 ||||||||||||| ||||| ||||| ||||| ||||| ||||||||| | |||||||| Sbjct: 279 cgggacatcttcctattatcagcttcagaaaggctttcgagtcacttctttggaaacagc 220 Query: 237 atcttcacgtttctgcgccaccttgtgtttgaggacaaatttaacattcttgta 290 ||| || | ||||| ||| | ||||| || || || ||||| ||||||||||| Sbjct: 219 atcctccctcttctgtgcccctttgtgcttcagaaccaattttacattcttgta 166
>gb|AC093196.2| Drosophila melanogaster clone BACR22H06, complete sequence Length = 173008 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| ||||| ||||| ||||| || || || || |||||||| Sbjct: 133632 ttgttgtagaagatggagaaggtggtggcctcgtagtcggctacctcgttcttcttccac 133691 Query: 154 aggat 158 ||||| Sbjct: 133692 aggat 133696
>gb|AC009744.8| Drosophila melanogaster clone BACR06G16, complete sequence Length = 179038 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| ||||| ||||| ||||| || || || || |||||||| Sbjct: 26491 ttgttgtagaagatggagaaggtggtggcctcgtagtcggctacctcgttcttcttccac 26550 Query: 154 aggat 158 ||||| Sbjct: 26551 aggat 26555
>gb|DQ440057.1| Aedes aegypti clone AE-309 translocon-associated complex TRAP gamma subunit mRNA, complete cds Length = 555 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| |||||||| || || || ||||| || || |||||||| Sbjct: 419 ttgttgtagaagatggagaaagtggttgcttcgtattccgcaacgtcgttcttcttccag 360 Query: 154 aggat 158 ||||| Sbjct: 359 aggat 355
>gb|AY118492.1| Drosophila melanogaster LD05267 full insert cDNA Length = 913 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| ||||| ||||| ||||| || || || || |||||||| Sbjct: 518 ttgttgtagaagatggagaaggtggtggcctcgtagtcggctacctcgttcttcttccac 459 Query: 154 aggat 158 ||||| Sbjct: 458 aggat 454
>ref|NM_135477.2| Drosophila melanogaster CG5885-RA (CG5885), mRNA Length = 879 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| ||||| ||||| ||||| || || || || |||||||| Sbjct: 518 ttgttgtagaagatggagaaggtggtggcctcgtagtcggctacctcgttcttcttccac 459 Query: 154 aggat 158 ||||| Sbjct: 458 aggat 454
>gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35 of 83 of the complete sequence Length = 264919 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| ||||| ||||| ||||| || || || || |||||||| Sbjct: 208721 ttgttgtagaagatggagaaggtggtggcctcgtagtcggctacctcgttcttcttccac 208780 Query: 154 aggat 158 ||||| Sbjct: 208781 aggat 208785
>gb|AC005135.1|AC005135 Drosophila melanogaster DNA sequence (P1 DS07070 (D331)), complete sequence Length = 67297 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| ||||| ||||| ||||| || || || || |||||||| Sbjct: 59277 ttgttgtagaagatggagaaggtggtggcctcgtagtcggctacctcgttcttcttccac 59336 Query: 154 aggat 158 ||||| Sbjct: 59337 aggat 59341
>gb|AY577321.1| Lymnaea stagnalis translocon associated protein gamma subunit-like protein mRNA, partial cds Length = 321 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 394 attgcagacacgatgaaagcattgccataaaa 425 |||||||| ||||||||||| ||||||||||| Sbjct: 140 attgcagatacgatgaaagcgttgccataaaa 109
>emb|BX034783.1|CNS08Z03 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA50DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 769 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcata 128 ||||||||||| |||||||| ||||| |||||||| Sbjct: 557 ttgttgtagaagatggagaaggtggtcgcctcata 523
>emb|BX029421.1|CNS08UV5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43DH01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 778 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcata 128 ||||||||||| |||||||| ||||| |||||||| Sbjct: 569 ttgttgtagaagatggagaaggtggtcgcctcata 535
>emb|BX026584.1|CNS08SOC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 670 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcata 128 ||||||||||| |||||||| ||||| |||||||| Sbjct: 554 ttgttgtagaagatggagaaggtggtcgcctcata 588
>emb|BX026583.1|CNS08SOB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA4DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 687 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcata 128 ||||||||||| |||||||| ||||| |||||||| Sbjct: 566 ttgttgtagaagatggagaaggtggtcgcctcata 532
>emb|BX015390.1|CNS08K1E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23AE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 835 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcata 128 ||||||||||| |||||||| ||||| |||||||| Sbjct: 609 ttgttgtagaagatggagaaggtggtcgcctcata 575
>emb|BX014139.1|CNS08J2N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21AH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 773 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcata 128 ||||||||||| |||||||| ||||| |||||||| Sbjct: 556 ttgttgtagaagatggagaaggtggtcgcctcata 522
>emb|CT032571.1| Platynereis dumerilii EST IB0AAA36BA11FM1 Length = 625 Score = 46.1 bits (23), Expect = 0.094 Identities = 50/59 (84%) Strand = Plus / Plus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttcca 152 |||||||| ||||||||||||||||| || || || || || ||||| || |||||||| Sbjct: 208 ttgttgtaaaaaatggagaatgtggtggcttcgtaatcggctacttcgttcttcttcca 266 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 382 agccaaataggaattgcagacacgatgaaagcattgccataaaa 425 |||||||| ||||||||||| || ||||| | |||||| ||||| Sbjct: 490 agccaaattggaattgcagaaacaatgaatgaattgccgtaaaa 533
>gb|BT013889.1| Lycopersicon esculentum clone 132874R, mRNA sequence Length = 1537 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 aaagaagcaacaatcaccaaaa 78 |||||||||||||||||||||| Sbjct: 1300 aaagaagcaacaatcaccaaaa 1321
>gb|AC167234.4| Mus musculus 10 BAC RP23-158E3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184159 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 42 ttcttcagaataaagaaagaag 63 |||||||||||||||||||||| Sbjct: 112347 ttcttcagaataaagaaagaag 112368
>gb|AY232032.1| Drosophila yakuba clone yak-ad_CG5885 mRNA sequence Length = 540 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtc 131 ||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 434 ttgttgtagaagatggagaaggtggtggcctcgtagtc 397
>gb|AY433488.1| Aedes aegypti ASAP ID: 43304 conserved unknown mRNA sequence Length = 735 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| ||||| || || || || ||||| || || |||||||| Sbjct: 525 ttgttgtagaagatggagaaagtggtcgcttcgtattccgcaacgtcgttcttcttccag 466 Query: 154 aggat 158 ||||| Sbjct: 465 aggat 461
>gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, complete sequence Length = 182677 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 aagttcttcagaataaagaaa 59 ||||||||||||||||||||| Sbjct: 142090 aagttcttcagaataaagaaa 142110
>emb|X83288.1|CCQUEK1 C.coturnix Quek1 mRNA for vascular endothelial growth factor receptor Length = 5390 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 agaaaatggagaatgtggttg 121 ||||||||||||||||||||| Sbjct: 1019 agaaaatggagaatgtggttg 1039
>emb|CR937936.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YP18AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 856 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctcatagtcagcaacttcatttttcttccaa 153 ||||||||||| |||||||| ||||| || || || || ||||| || || |||||||| Sbjct: 575 ttgttgtagaagatggagaaagtggtcgcttcgtattccgcaacgtcgttcttcttccag 516 Query: 154 aggat 158 ||||| Sbjct: 515 aggat 511
>emb|AL845473.7| Mouse DNA sequence from clone RP23-212E8 on chromosome 2, complete sequence Length = 189998 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 cagccaaataggaattgcaga 401 ||||||||||||||||||||| Sbjct: 74488 cagccaaataggaattgcaga 74508
>gb|AC141895.4| Mus musculus BAC clone RP23-299L22 from 10, complete sequence Length = 178358 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 aaagcattgccataaaaaagc 429 ||||||||||||||||||||| Sbjct: 8576 aaagcattgccataaaaaagc 8596
>gb|AC133516.3| Mus musculus BAC clone RP23-260G15 from chromosome 10, complete sequence Length = 203750 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 aaagcattgccataaaaaagc 429 ||||||||||||||||||||| Sbjct: 195794 aaagcattgccataaaaaagc 195814
>gb|AC159917.3| Aotus nancymaae clone CH258-526A6, complete sequence Length = 165172 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 caaatttaacattcttgtatgcaaaagc 299 ||||||||||||||| ||||||||||| Sbjct: 36994 caaatttaacattctattatgcaaaagc 37021
>gb|AY554370.1| Takifugu rubripes claudin 27c (cldn27c) gene, complete cds Length = 1320 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 taaagaaagaagcaacaatc 71 |||||||||||||||||||| Sbjct: 908 taaagaaagaagcaacaatc 927
>gb|AC148481.9| Medicago truncatula clone mth2-36d21, complete sequence Length = 105513 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 55 agaaagaagcaacaatcaccaaaaccag 82 ||||||||| |||||| ||||||||||| Sbjct: 59943 agaaagaaggaacaataaccaaaaccag 59916
>emb|AL138823.14| Human DNA sequence from clone RP11-64J21 on chromosome 13 Contains part of a novel gene similar to tumour-associated hydroquinone (NADH) oxidase TNOX, a ribosomal protein L36 (RPL36) pseudogene and a CpG island, complete sequence Length = 175112 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 aagttcttcagaataaagaaagaa 62 |||||||||| ||||||||||||| Sbjct: 48877 aagttcttcacaataaagaaagaa 48900
>emb|AL121787.22|HSDJ512E2 Human DNA sequence from clone RP3-512E2 on chromosome 6q14.3-16.1 Contains part of the BACH2 gene for BTB and CNC homology 1 basic leucine zipper transcription factor 2 and a novel gene, complete sequence Length = 106556 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gttgaagttcttcagaataa 54 |||||||||||||||||||| Sbjct: 89434 gttgaagttcttcagaataa 89415
>emb|BX049751.1|CNS09AJV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC25DD02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 653 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 94 ttgttgtagaaaatggagaatgtggttgcctc 125 ||||||||||| |||||||| ||||| ||||| Sbjct: 371 ttgttgtagaagatggagaaggtggtcgcctc 402
>emb|BX049750.1|CNS09AJU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC25DD02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 355 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctc 125 ||||||||||| |||||||| ||||| ||||| Sbjct: 122 ttgttgtagaagatggagaaggtggtcgcctc 91
>emb|BX031987.1|CNS08WUF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA47CF03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 851 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 94 ttgttgtagaaaatggagaatgtggttgcctc 125 ||||||||||| |||||||| ||||| ||||| Sbjct: 495 ttgttgtagaagatggagaaggtggtcgcctc 526
>emb|BX031986.1|CNS08WUE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47CF03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 799 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctc 125 ||||||||||| |||||||| ||||| ||||| Sbjct: 554 ttgttgtagaagatggagaaggtggtcgcctc 523
>emb|AL031545.1|SPCC285 S.pombe chromosome III cosmid c285 Length = 39996 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 catttttcttccaaaggatc 159 |||||||||||||||||||| Sbjct: 29443 catttttcttccaaaggatc 29424
>emb|AL645589.24| Mouse DNA sequence from clone RP23-289H16 on chromosome 11 Contains the 3' end of the Vdac1 gene for voltage-dependent anion channel 1, a novel gene (9530068E07Rik), a ubiquinol-cytochrome c reductase subunit (Uqcr) pseudogene, a novel pseudogene, a ribosomal protein S28 (Rps28) pseudogene and a CpG island, complete sequence Length = 165536 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ctctagaaacagcatcttca 243 |||||||||||||||||||| Sbjct: 160107 ctctagaaacagcatcttca 160088
>gb|AC107025.3| Homo sapiens 3 BAC RP11-474M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178033 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tcctttcatctttctctttt 177 |||||||||||||||||||| Sbjct: 136386 tcctttcatctttctctttt 136367
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 aatttaacattcttgtatgc 293 |||||||||||||||||||| Sbjct: 89721 aatttaacattcttgtatgc 89702
>ref|NM_001023333.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC285.14), partial mRNA Length = 3453 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 catttttcttccaaaggatc 159 |||||||||||||||||||| Sbjct: 1550 catttttcttccaaaggatc 1531
>gb|AY040552.1| Scapharca satowi cytochrome c oxidase subunit 1 (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 599 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 aaagaaagaagcaacaatca 72 |||||||||||||||||||| Sbjct: 490 aaagaaagaagcaacaatca 471
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 aatttaacattcttgtatgc 293 |||||||||||||||||||| Sbjct: 12569634 aatttaacattcttgtatgc 12569615
>ref|XM_314880.2| Anopheles gambiae str. PEST ENSANGP00000012470 (ENSANGG00000009981), partial mRNA Length = 996 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 94 ttgttgtagaaaatggagaatgtggttgcctc 125 ||||||||||| |||||||| ||||| ||||| Sbjct: 431 ttgttgtagaagatggagaaggtggtcgcctc 400
>emb|AL049777.5|CNS00002 Human chromosome 14 DNA sequence BAC R-966I7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170307 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 acttcatttttcttccaaag 155 |||||||||||||||||||| Sbjct: 158591 acttcatttttcttccaaag 158610
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 aatttaacattcttgtatgc 293 |||||||||||||||||||| Sbjct: 12576974 aatttaacattcttgtatgc 12576955
>gb|AC126020.4| Mus musculus BAC clone RP24-364O7 from 8, complete sequence Length = 179287 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 aataaagaaagaagcaacaa 69 |||||||||||||||||||| Sbjct: 137037 aataaagaaagaagcaacaa 137056 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,054,824 Number of Sequences: 3902068 Number of extensions: 5054824 Number of successful extensions: 135767 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 135394 Number of HSP's gapped (non-prelim): 292 length of query: 433 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 411 effective length of database: 17,147,199,772 effective search space: 7047499106292 effective search space used: 7047499106292 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
