ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1k01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103362.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
2dbj|AK063160.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 7e-93
3gb|AY105913.1| Zea mays PCO070246 mRNA sequence 311 2e-81
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 127 5e-26
5gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome... 127 5e-26
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
7ref|XM_470247.1| Oryza sativa (japonica cultivar-group), predic... 117 5e-23
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 58 4e-05
10emb|AL732641.5|CNS08C9G Oryza sativa chromosome 12, . BAC OSJNBb... 58 4e-05
11ref|NM_179172.2| Arabidopsis thaliana unknown protein AT4G35920 ... 50 0.009
12ref|NM_119759.2| Arabidopsis thaliana unknown protein AT4G35920 ... 50 0.009
13ref|NM_179173.3| Arabidopsis thaliana unknown protein AT4G35920 ... 50 0.009
14emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, ... 50 0.009
15emb|AL022373.1|ATT19K4 Arabidopsis thaliana DNA chromosome 4, BA... 50 0.009
16gb|AY136293.1| Arabidopsis thaliana putative protein (At4g35920)... 50 0.009
17gb|AY133604.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, co... 50 0.009
18gb|AF367322.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, co... 50 0.009
19emb|BX826751.1|CNS0A435 Arabidopsis thaliana Full-length cDNA Co... 50 0.009
20gb|BT003430.1| Arabidopsis thaliana putative protein (At4g35920)... 50 0.009
21emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BA... 50 0.009
22dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
23dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
24ref|XM_513998.1| PREDICTED: Pan troglodytes similar to dynamin 3... 44 0.57
25gb|AC146008.3| Pan troglodytes BAC clone RP43-13N15 from 7, comp... 44 0.57
26gb|AC004852.2| Homo sapiens PAC clone RP4-668E10 from 7, complet... 44 0.57
27emb|Z97195.1|HS106H8 Human DNA sequence from clone RP1-106H8 on ... 44 0.57
28gb|AC183682.3| Pan troglodytes BAC clone CH251-317C18 from chrom... 44 0.57
29gb|AC146009.3| Pan troglodytes BAC clone RP43-13O12 from chromos... 44 0.57
30gb|AC122031.2| Mus musculus BAC clone RP24-401P10 from 6, comple... 42 2.3
31gb|AC164177.6| Mus musculus 10 BAC RP23-102O12 (Roswell Park Can... 42 2.3
32emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1... 42 2.3
33gb|AC092366.3| Homo sapiens chromosome 5 clone RP11-461C13, comp... 42 2.3
34gb|AC159133.2| Pan troglodytes BAC clone CH251-51M20 from chromo... 42 2.3
35gb|AC022431.6| Homo sapiens chromosome 5 clone CTD-2583B1, compl... 42 2.3
36gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Canc... 42 2.3
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
39gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromo... 42 2.3
40dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
41dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
42gb|AC008873.4|AC008873 Homo sapiens chromosome 5 clone CTD-2199H... 42 2.3
43dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
44gb|BC091967.1| Danio rerio cDNA clone IMAGE:7154473 42 2.3
45dbj|AK102912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
46gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom... 40 8.9
47ref|XM_706576.1| Candida albicans SC5314 hypothetical protein (C... 40 8.9
48ref|XM_749141.1| Aspergillus fumigatus Af293 glutamate--cysteine... 40 8.9
49gb|AC135780.2| Homo sapiens chromosome 16 clone CTD-2320F3, comp... 40 8.9
50gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome... 40 8.9
51ref|XM_883845.1| Candida albicans SC5314 hypothetical protein (C... 40 8.9
52ref|XM_706594.1| Candida albicans SC5314 hypothetical protein (C... 40 8.9
53gb|AC122289.2| Mus musculus BAC clone RP23-254F12 from 3, comple... 40 8.9
54emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chrom... 40 8.9
55emb|AL356295.9| Human DNA sequence from clone RP11-768P11 on chr... 40 8.9
56emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009... 40 8.9
57gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence 40 8.9
58emb|X64346.1|HSGEND Saimiriine herpesvirus 2 complete genome 40 8.9
59emb|BX294144.1| Pirellula sp. strain 1 complete genome; segment ... 40 8.9
60emb|AJ410493.1|SHE410493 Saimiriine herpesvirus 2 complete L-DNA... 40 8.9
61gb|AC116335.2| Homo sapiens chromosome 5 clone CTD-2297M2, compl... 40 8.9
62dbj|AK134097.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 8.9
63gb|DP000030.1| Sus scrofa target 116 genomic scaffold 40 8.9
64dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR... 40 8.9
65gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, com... 40 8.9
66gb|AC019067.9| Homo sapiens BAC clone RP11-171B14 from 2, comple... 40 8.9
67gb|AC138538.3| Homo sapiens chromosome 16 clone XXfos-87262F2, c... 40 8.9
68gb|AC137491.1| Homo sapiens chromosome 16 clone LA16c-340B2, com... 40 8.9
69gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, com... 40 8.9
70gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 m... 40 8.9
71emb|AJ131939.1|SHE131939 Herpesvirus saimiri SHV2 C488 ORF56 (pa... 40 8.9
72gb|AC150802.3| Equus caballus clone CH241-121C14, complete sequence 40 8.9
73emb|AL929005.7| Zebrafish DNA sequence from clone CH211-223P8, c... 40 8.9
74gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromoso... 40 8.9
75gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome ... 40 8.9
76emb|BX465834.20| Zebrafish DNA sequence from clone CH211-202E12 ... 40 8.9
77gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, co... 40 8.9
78dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 40 8.9
79gb|AC093241.4| Homo sapiens chromosome 5 clone RP11-104B22, comp... 40 8.9
80gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl... 40 8.9
81gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 8.9
82gb|M21943.1|HSV52K Hepesvirus saimiri 52 kDa immediate-early pho... 40 8.9
83gb|M86409.1|HSV3PRGEN Herpesvirus saimiri the most three prime e... 40 8.9 
>dbj|AK103362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126N07, full
            insert sequence
          Length = 2101

 Score =  357 bits (180), Expect = 3e-95
 Identities = 303/344 (88%)
 Strand = Plus / Minus

                                                                        
Query: 293  ccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgt 352
            ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1822 ccacgaatctcaacttcccgccattcttgaacaagcgcacagcaacaacacatcaaatgt 1763

                                                                        
Query: 353  gaaaggaaatcatcacagcaccctcccgcaatatttagcctttgacgaagctttctcctt 412
            || ||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||| 
Sbjct: 1762 gataggaaatcatcaatgcaacctcccgcaatatttagcttttgacgaagctttctcctc 1703

                                                                        
Query: 413  acacagcaagtgtaacagcaacaagacaatatgagggagtacgccataatatcattgcag 472
            ||||||||||||||||| || || || ||||| ||||| || ||||||||||||||||| 
Sbjct: 1702 acacagcaagtgtaacaacagcaggataatatcagggaatatgccataatatcattgcat 1643

                                                                        
Query: 473  gcttctcccgaagacatgggcttgtttttggcgattgaagcaatccttgagaatgttcca 532
            |||||   ||| ||||||||| |||| || || |||||||||||| ||||||||||||||
Sbjct: 1642 gcttccgacgatgacatgggcctgttcttcgcaattgaagcaatctttgagaatgttcca 1583

                                                                        
Query: 533  catggaaaaaagaaggtcttcagacacagagctggctctgaacagcaaccaagtaaatct 592
            || || |||||||| ||  ||| ||||| || ||||||||||||||||||||| ||||||
Sbjct: 1582 caggggaaaaagaatgttctcaaacacaaagatggctctgaacagcaaccaagcaaatct 1523

                                                        
Query: 593  gcatgccactcatcactgtatgatgctgtactcgagaccagatc 636
            ||||||||||| || ||||||||| || | || |||||||||||
Sbjct: 1522 gcatgccactcgtcgctgtatgatcctctgcttgagaccagatc 1479
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>dbj|AK063160.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H09, full
            insert sequence
          Length = 1879

 Score =  349 bits (176), Expect = 7e-93
 Identities = 302/344 (87%)
 Strand = Plus / Minus

                                                                        
Query: 293  ccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgt 352
            ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1598 ccacgaatctcaactttccgccattcttgaacaagcgcacagcaacaacacatcaaatgt 1539

                                                                        
Query: 353  gaaaggaaatcatcacagcaccctcccgcaatatttagcctttgacgaagctttctcctt 412
            || ||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||| 
Sbjct: 1538 gataggaaatcatcaatgcaacctcccgcaatatttagcttttgacgaagctttctcctc 1479

                                                                        
Query: 413  acacagcaagtgtaacagcaacaagacaatatgagggagtacgccataatatcattgcag 472
            ||||||||||||||||| || || || ||||| ||||| || ||||||||||||||||| 
Sbjct: 1478 acacagcaagtgtaacaacagcaggataatatcagggaatatgccataatatcattgcat 1419

                                                                        
Query: 473  gcttctcccgaagacatgggcttgtttttggcgattgaagcaatccttgagaatgttcca 532
            |||||   ||| ||||||||| |||| || || |||||||||||| ||||||||||||||
Sbjct: 1418 gcttccgacgatgacatgggcctgttcttcgcaattgaagcaatctttgagaatgttcca 1359

                                                                        
Query: 533  catggaaaaaagaaggtcttcagacacagagctggctctgaacagcaaccaagtaaatct 592
            || || |||||||| ||  ||| ||||| || ||||||||||||||||||||| ||||||
Sbjct: 1358 caggggaaaaagaatgttctcaaacacaaagatggctctgaacagcaaccaagcaaatct 1299

                                                        
Query: 593  gcatgccactcatcactgtatgatgctgtactcgagaccagatc 636
            ||||||||||| || ||||||||| || | || |||||||||||
Sbjct: 1298 gcatgccactcgtcgctgtatgatcctctgcttgagaccagatc 1255
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>gb|AY105913.1| Zea mays PCO070246 mRNA sequence
          Length = 1089

 Score =  311 bits (157), Expect = 2e-81
 Identities = 295/341 (86%)
 Strand = Plus / Minus

                                                                       
Query: 296 cgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgtgaa 355
           |||||||| |||||||||||||||||||||||||| |||||||| |||| || |||||||
Sbjct: 756 cgaatctcaacttcccgccattcttgaacaagcgcgcagcaacaacacagcagatgtgaa 697

                                                                       
Query: 356 aggaaatcatcacagcaccctcccgcaatatttagcctttgacgaagctttctccttaca 415
           ||||| || |||||||| ||||||||||| |  | | |||||||||||||||||||||||
Sbjct: 696 aggaagtcgtcacagcagcctcccgcaatgtccaacttttgacgaagctttctccttaca 637

                                                                       
Query: 416 cagcaagtgtaacagcaacaagacaatatgagggagtacgccataatatcattgcaggct 475
           ||||| || |||||||| || |||||||| |||||||||||||||||||||||||| || 
Sbjct: 636 cagcatgtataacagcagcaggacaatattagggagtacgccataatatcattgcaagcc 577

                                                                       
Query: 476 tctcccgaagacatgggcttgtttttggcgattgaagcaatccttgagaatgttccacat 535
           || || |||||||| ||| |||  ||||||||||||||||| || ||||| |||||||| 
Sbjct: 576 tccccagaagacattggcctgtccttggcgattgaagcaattctcgagaaggttccacag 517

                                                                       
Query: 536 ggaaaaaagaaggtcttcagacacagagctggctctgaacagcaaccaagtaaatctgca 595
           || || || |||||||||| ||||| ||| || ||||||||||| |||||||||||||||
Sbjct: 516 gggaagaacaaggtcttcaaacacaaagccggttctgaacagcagccaagtaaatctgca 457

                                                    
Query: 596 tgccactcatcactgtatgatgctgtactcgagaccagatc 636
           ||||| || || ||||| ||| || |||| ||||| |||||
Sbjct: 456 tgccattcgtcgctgtacgatcctctacttgagacaagatc 416
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 5e-26
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                           
Query: 276     gaaactcaccgtatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagc 335
               |||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3054914 gaaactcaccataagctccacgaatctcaacttcccgccattcttgaacaagcgcacagc 3054855

                                               
Query: 336     aacagcacatcacatgtgaaaggaaatcatca 367
               |||| ||||||| |||||| ||||||||||||
Sbjct: 3054854 aacaacacatcaaatgtgataggaaatcatca 3054823



 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Minus

                                                                           
Query: 378     ccgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaacaag 437
               |||||||||||||| ||||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 3054429 ccgcaatatttagcttttgacgaagctttctcctcacacagcaagtgtaacaacagcagg 3054370

                                                       
Query: 438     acaatatgagggagtacgccataatatcattgcaggcttc 477
               | ||||| ||||| || ||||||||||||||||| |||||
Sbjct: 3054369 ataatatcagggaatatgccataatatcattgcatgcttc 3054330



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                           
Query: 556     acacagagctggctctgaacagcaaccaagtaaatctgcatgccactcatcactgtatga 615
               ||||| || ||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 3053166 acacaaagatggctctgaacagcaaccaagcaaatctgcatgccactcgtcgctgtatga 3053107

                                    
Query: 616     tgctgtactcgagaccagatc 636
               | || | || |||||||||||
Sbjct: 3053106 tcctctgcttgagaccagatc 3053086



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                           
Query: 486     acatgggcttgtttttggcgattgaagcaatccttgagaatgttccacatggaaaaaaga 545
               |||||||| |||| || || |||||||||||| |||||||||||||||| || |||||||
Sbjct: 3053952 acatgggcctgttcttcgcaattgaagcaatctttgagaatgttccacaggggaaaaaga 3053893

                
Query: 546     a 546
               |
Sbjct: 3053892 a 3053892
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>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0011L14, complete sequence
          Length = 117974

 Score =  127 bits (64), Expect = 5e-26
 Identities = 85/92 (92%)
 Strand = Plus / Plus

                                                                         
Query: 276   gaaactcaccgtatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagc 335
             |||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 41347 gaaactcaccataagctccacgaatctcaacttcccgccattcttgaacaagcgcacagc 41406

                                             
Query: 336   aacagcacatcacatgtgaaaggaaatcatca 367
             |||| ||||||| |||||| ||||||||||||
Sbjct: 41407 aacaacacatcaaatgtgataggaaatcatca 41438



 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                         
Query: 378   ccgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaacaag 437
             |||||||||||||| ||||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 41832 ccgcaatatttagcttttgacgaagctttctcctcacacagcaagtgtaacaacagcagg 41891

                                                     
Query: 438   acaatatgagggagtacgccataatatcattgcaggcttc 477
             | ||||| ||||| || ||||||||||||||||| |||||
Sbjct: 41892 ataatatcagggaatatgccataatatcattgcatgcttc 41931



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                         
Query: 556   acacagagctggctctgaacagcaaccaagtaaatctgcatgccactcatcactgtatga 615
             ||||| || ||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 43095 acacaaagatggctctgaacagcaaccaagcaaatctgcatgccactcgtcgctgtatga 43154

                                  
Query: 616   tgctgtactcgagaccagatc 636
             | || | || |||||||||||
Sbjct: 43155 tcctctgcttgagaccagatc 43175



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                         
Query: 486   acatgggcttgtttttggcgattgaagcaatccttgagaatgttccacatggaaaaaaga 545
             |||||||| |||| || || |||||||||||| |||||||||||||||| || |||||||
Sbjct: 42309 acatgggcctgttcttcgcaattgaagcaatctttgagaatgttccacaggggaaaaaga 42368

              
Query: 546   a 546
             |
Sbjct: 42369 a 42369
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 5e-26
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                           
Query: 276     gaaactcaccgtatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagc 335
               |||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3055025 gaaactcaccataagctccacgaatctcaacttcccgccattcttgaacaagcgcacagc 3054966

                                               
Query: 336     aacagcacatcacatgtgaaaggaaatcatca 367
               |||| ||||||| |||||| ||||||||||||
Sbjct: 3054965 aacaacacatcaaatgtgataggaaatcatca 3054934



 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Minus

                                                                           
Query: 378     ccgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaacaag 437
               |||||||||||||| ||||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 3054540 ccgcaatatttagcttttgacgaagctttctcctcacacagcaagtgtaacaacagcagg 3054481

                                                       
Query: 438     acaatatgagggagtacgccataatatcattgcaggcttc 477
               | ||||| ||||| || ||||||||||||||||| |||||
Sbjct: 3054480 ataatatcagggaatatgccataatatcattgcatgcttc 3054441



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                           
Query: 556     acacagagctggctctgaacagcaaccaagtaaatctgcatgccactcatcactgtatga 615
               ||||| || ||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 3053277 acacaaagatggctctgaacagcaaccaagcaaatctgcatgccactcgtcgctgtatga 3053218

                                    
Query: 616     tgctgtactcgagaccagatc 636
               | || | || |||||||||||
Sbjct: 3053217 tcctctgcttgagaccagatc 3053197



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                           
Query: 486     acatgggcttgtttttggcgattgaagcaatccttgagaatgttccacatggaaaaaaga 545
               |||||||| |||| || || |||||||||||| |||||||||||||||| || |||||||
Sbjct: 3054063 acatgggcctgttcttcgcaattgaagcaatctttgagaatgttccacaggggaaaaaga 3054004

                
Query: 546     a 546
               |
Sbjct: 3054003 a 3054003
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>ref|XM_470247.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3609

 Score =  117 bits (59), Expect = 5e-23
 Identities = 71/75 (94%)
 Strand = Plus / Minus

                                                                       
Query: 293 ccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatcacatgt 352
           ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 983 ccacgaatctcaacttcccgccattcttgaacaagcgcacagcaacaacacatcaaatgt 924

                          
Query: 353 gaaaggaaatcatca 367
           || ||||||||||||
Sbjct: 923 gataggaaatcatca 909



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                       
Query: 487 catgggcttgtttttggcgattgaagcaatccttgagaatgttccacatggaaaaaagaa 546
           ||||||| |||| || || |||||||||||| |||||||||||||||| || ||||||||
Sbjct: 898 catgggcctgttcttcgcaattgaagcaatctttgagaatgttccacaggggaaaaagaa 839
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 379      cgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaaca 435
                ||||||||||||| |||||| ||| ||||||   | |||||||||||||||||||||
Sbjct: 12108175 cgcaatatttagcttttgacaaagttttctcacgatacagcaagtgtaacagcaaca 12108231
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 379      cgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaaca 435
                ||||||||||||| |||||| ||| ||||||   | |||||||||||||||||||||
Sbjct: 12062545 cgcaatatttagcttttgacaaagttttctcacgatacagcaagtgtaacagcaaca 12062601
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>emb|AL732641.5|CNS08C9G Oryza sativa chromosome 12, . BAC OSJNBb0049G07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 92432

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 379   cgcaatatttagcctttgacgaagctttctccttacacagcaagtgtaacagcaaca 435
             ||||||||||||| |||||| ||| ||||||   | |||||||||||||||||||||
Sbjct: 39632 cgcaatatttagcttttgacaaagttttctcacgatacagcaagtgtaacagcaaca 39576
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>ref|NM_179172.2| Arabidopsis thaliana unknown protein AT4G35920 transcript variant
            AT4G35920.2 mRNA, complete cds
          Length = 1829

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1561 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1502

                 
Query: 347  acatg 351
            |||||
Sbjct: 1501 acatg 1497
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>ref|NM_119759.2| Arabidopsis thaliana unknown protein AT4G35920 transcript variant
            AT4G35920.1 mRNA, complete cds
          Length = 1898

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1630 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1571

                 
Query: 347  acatg 351
            |||||
Sbjct: 1570 acatg 1566
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>ref|NM_179173.3| Arabidopsis thaliana unknown protein AT4G35920 transcript variant
            AT4G35920.3 mRNA, complete cds
          Length = 1880

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1507 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1448

                 
Query: 347  acatg 351
            |||||
Sbjct: 1447 acatg 1443
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>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84
          Length = 195452

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 287   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
             ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 84002 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 84061

                  
Query: 347   acatg 351
             |||||
Sbjct: 84062 acatg 84066
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>emb|AL022373.1|ATT19K4 Arabidopsis thaliana DNA chromosome 4, BAC clone T19K4 (ESSAII project)
          Length = 106007

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 287   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
             ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 18733 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 18792

                  
Query: 347   acatg 351
             |||||
Sbjct: 18793 acatg 18797
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>gb|AY136293.1| Arabidopsis thaliana putative protein (At4g35920) mRNA, complete cds
          Length = 1873

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1619 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1560

                 
Query: 347  acatg 351
            |||||
Sbjct: 1559 acatg 1555
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>gb|AY133604.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, complete cds
          Length = 1323

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1211 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1152

                 
Query: 347  acatg 351
            |||||
Sbjct: 1151 acatg 1147
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>gb|AF367322.1| Arabidopsis thaliana AT4g35920/F4B14_190 mRNA, complete cds
          Length = 1865

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1629 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1570

                 
Query: 347  acatg 351
            |||||
Sbjct: 1569 acatg 1565
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>emb|BX826751.1|CNS0A435 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB60ZB06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1824

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1449 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1390

                 
Query: 347  acatg 351
            |||||
Sbjct: 1389 acatg 1385
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>gb|BT003430.1| Arabidopsis thaliana putative protein (At4g35920) mRNA, complete cds
          Length = 1381

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
            ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 1211 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 1152

                 
Query: 347  acatg 351
            |||||
Sbjct: 1151 acatg 1147
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>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project)
          Length = 99461

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 287   tatgcaccacgaatctctacttcccgccattcttgaacaagcgcacagcaacagcacatc 346
             ||||| ||||||||||| ||||| | |  |||||| ||||| ||||||||||| ||||| 
Sbjct: 75806 tatgccccacgaatctcaacttctctcagttcttgtacaagggcacagcaacaacacatt 75865

                  
Query: 347   acatg 351
             |||||
Sbjct: 75866 acatg 75870
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 448      ggagtacgccataatatcattgcaggcttct 478
                |||||| ||||||||||||||||| ||||||
Sbjct: 10842112 ggagtatgccataatatcattgcatgcttct 10842082
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 448   ggagtacgccataatatcattgcaggcttct 478
             |||||| ||||||||||||||||| ||||||
Sbjct: 65835 ggagtatgccataatatcattgcatgcttct 65805
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>ref|XM_513998.1| PREDICTED: Pan troglodytes similar to dynamin 3; Dyna III; Dynamin
            III (LOC457514), mRNA
          Length = 3428

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 144  aaataaattttgtctgtcattc 165
            ||||||||||||||||||||||
Sbjct: 3156 aaataaattttgtctgtcattc 3135
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>gb|AC146008.3| Pan troglodytes BAC clone RP43-13N15 from 7, complete sequence
          Length = 151195

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 515    atccttgagaatgttccacatg 536
              ||||||||||||||||||||||
Sbjct: 122184 atccttgagaatgttccacatg 122163
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>gb|AC004852.2| Homo sapiens PAC clone RP4-668E10 from 7, complete sequence
          Length = 158541

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 515    atccttgagaatgttccacatg 536
              ||||||||||||||||||||||
Sbjct: 129125 atccttgagaatgttccacatg 129146
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>emb|Z97195.1|HS106H8 Human DNA sequence from clone RP1-106H8 on chromosome 1q24 Contains the
              3' end of the DNM3 gene for dynamin 3, the PIGC gene for
              phosphatidylinositol glycan, class C and the LOC92346 gene
              for a novel protein, complete sequence
          Length = 175825

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 144    aaataaattttgtctgtcattc 165
              ||||||||||||||||||||||
Sbjct: 140958 aaataaattttgtctgtcattc 140979
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>gb|AC183682.3| Pan troglodytes BAC clone CH251-317C18 from chromosome 5, complete
             sequence
          Length = 167762

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 144   aaataaattttgtctgtcattc 165
             ||||||||||||||||||||||
Sbjct: 18952 aaataaattttgtctgtcattc 18931
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>gb|AC146009.3| Pan troglodytes BAC clone RP43-13O12 from chromosome 7, complete sequence
          Length = 169801

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 515    atccttgagaatgttccacatg 536
              ||||||||||||||||||||||
Sbjct: 112034 atccttgagaatgttccacatg 112013
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>gb|AC122031.2| Mus musculus BAC clone RP24-401P10 from 6, complete sequence
          Length = 157782

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 522   agaatgttccacatggaaaaaagaa 546
             ||||||||||||||||||| |||||
Sbjct: 45690 agaatgttccacatggaaagaagaa 45714
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>gb|AC164177.6| Mus musculus 10 BAC RP23-102O12 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 196230

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 352   tgaaaggaaatcatcacagcaccct 376
             ||||||||||| |||||||||||||
Sbjct: 57275 tgaaaggaaatgatcacagcaccct 57251
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>emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1, COMPLETE SEQUENCE
          Length = 116729

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                          
Query: 486    acatgggcttgtttttggcgattgaagcaatccttgagaatgttccacatggaaaaaaga 545
              |||||||| |||||||  | | || ||||||| |||| ||||||||||| ||| | ||||
Sbjct: 101925 acatgggcctgttttttacaactgtagcaatctttgaaaatgttccacaaggatagaaga 101866

                       
Query: 546    aggtcttca 554
              | |||||||
Sbjct: 101865 atgtcttca 101857
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>gb|AC092366.3| Homo sapiens chromosome 5 clone RP11-461C13, complete sequence
          Length = 158230

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 74   aagcaatttgaatagtttcta 94
            |||||||||||||||||||||
Sbjct: 5558 aagcaatttgaatagtttcta 5538
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>gb|AC159133.2| Pan troglodytes BAC clone CH251-51M20 from chromosome unknown, complete
              sequence
          Length = 149808

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 590    tctgcatgccactcatcactg 610
              |||||||||||||||||||||
Sbjct: 106977 tctgcatgccactcatcactg 106957
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>gb|AC022431.6| Homo sapiens chromosome 5 clone CTD-2583B1, complete sequence
          Length = 173698

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 590   tctgcatgccactcatcactg 610
             |||||||||||||||||||||
Sbjct: 70568 tctgcatgccactcatcactg 70548
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>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 209599

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 352    tgaaaggaaatcatcacagcaccct 376
              ||||||||||| |||||||||||||
Sbjct: 204800 tgaaaggaaatgatcacagcaccct 204776
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 381      caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 429
                ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 10973097 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 10973145
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 381      caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 429
                ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 18025748 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 18025796
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>gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromosome unknown, complete
              sequence
          Length = 182330

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 590    tctgcatgccactcatcactg 610
              |||||||||||||||||||||
Sbjct: 177340 tctgcatgccactcatcactg 177320
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>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0054L14
          Length = 150022

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 381   caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 429
             ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 52989 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 53037
to top
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0504D03
          Length = 139201

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 381  caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 429
            ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 2189 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 2237
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>gb|AC008873.4|AC008873 Homo sapiens chromosome 5 clone CTD-2199H11, complete sequence
          Length = 170358

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    aagcaatttgaatagtttcta 94
             |||||||||||||||||||||
Sbjct: 82314 aagcaatttgaatagtttcta 82294
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>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0091I19
          Length = 126544

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 381   caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 429
             ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 35040 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 35088
to top
>gb|BC091967.1| Danio rerio cDNA clone IMAGE:7154473
          Length = 1690

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 59   attttgcataaaaggaagcaa 79
            |||||||||||||||||||||
Sbjct: 1206 attttgcataaaaggaagcaa 1226
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>dbj|AK102912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113K17, full
           insert sequence
          Length = 3073

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 381 caatatttagcctttgacgaagctttctccttacacagcaagtgtaaca 429
           ||||||||||| | |||| ||| ||||||   |||||||||||||||||
Sbjct: 707 caatatttagcttctgacaaagttttctctccacacagcaagtgtaaca 659
to top
>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   tgtctgtcattcctttgtca 173
             ||||||||||||||||||||
Sbjct: 14906 tgtctgtcattcctttgtca 14925
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>ref|XM_706576.1| Candida albicans SC5314 hypothetical protein (CaO19.8926), mRNA
          Length = 1681

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 aacaatgctatatcaaccct 206
           ||||||||||||||||||||
Sbjct: 154 aacaatgctatatcaaccct 173
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>ref|XM_749141.1| Aspergillus fumigatus Af293 glutamate--cysteine ligase synthetase
           gamma-ecs gcs (Afu3g13900) partial mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 tgaagatcatagtccacggt 254
           ||||||||||||||||||||
Sbjct: 719 tgaagatcatagtccacggt 700
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>gb|AC135780.2| Homo sapiens chromosome 16 clone CTD-2320F3, complete sequence
          Length = 125603

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 527    gttccacatggaaaaaagaa 546
              ||||||||||||||||||||
Sbjct: 103245 gttccacatggaaaaaagaa 103264
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>gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome 12, complete
            sequence
          Length = 168279

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 548  gtcttcagacacagagctgg 567
            ||||||||||||||||||||
Sbjct: 9376 gtcttcagacacagagctgg 9357
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>ref|XM_883845.1| Candida albicans SC5314 hypothetical protein (CaJ7.0381) partial
           mRNA
          Length = 4689

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 aacaatgctatatcaaccct 206
           ||||||||||||||||||||
Sbjct: 154 aacaatgctatatcaaccct 173
to top
>ref|XM_706594.1| Candida albicans SC5314 hypothetical protein (CaO19.1346) partial
           mRNA
          Length = 1681

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 aacaatgctatatcaaccct 206
           ||||||||||||||||||||
Sbjct: 154 aacaatgctatatcaaccct 173
to top
>gb|AC122289.2| Mus musculus BAC clone RP23-254F12 from 3, complete sequence
          Length = 210708

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 120    gcttcagtattgtatcagcctgat 143
              |||||||| |||||||||||||||
Sbjct: 132075 gcttcagtgttgtatcagcctgat 132098
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>emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chromosome 17, complete
             sequence
          Length = 177939

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   caatccttgagaatgttcca 532
             ||||||||||||||||||||
Sbjct: 70894 caatccttgagaatgttcca 70875
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>emb|AL356295.9| Human DNA sequence from clone RP11-768P11 on chromosome 13, complete
             sequence
          Length = 134347

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   aaatctgcatgccactcatc 606
             ||||||||||||||||||||
Sbjct: 41228 aaatctgcatgccactcatc 41247
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>emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009E24 on chromosome 20 Contains the
             5' end of the ADAM33 gene for a disintegrin and
             metalloproteinase domain 33 protein, the SN gene encoding
             sialoadhesin, the C20orf60 gene, the C20orf27 gene, the
             C20orf28 gene, the CENPB gene for centromere protein B,
             the CDC25B gene for cell division cycle protein 25B, the
             C20orf29 gene, the 5' end of the gene for a novel protein
             (KIAA1271) and nine CpG islands, complete sequence
          Length = 185820

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 553   cagacacagagctggctctg 572
             ||||||||||||||||||||
Sbjct: 61111 cagacacagagctggctctg 61092
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>gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence
          Length = 171421

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   caatccttgagaatgttcca 532
             ||||||||||||||||||||
Sbjct: 62347 caatccttgagaatgttcca 62366
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>emb|X64346.1|HSGEND Saimiriine herpesvirus 2 complete genome
          Length = 112930

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   agcaagtgtaacagcaacaa 436
             ||||||||||||||||||||
Sbjct: 78127 agcaagtgtaacagcaacaa 78146
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>emb|BX294144.1| Pirellula sp. strain 1 complete genome; segment 12/24
          Length = 304850

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 465    cattgcaggcttctcccgaagaca 488
              |||||||| |||||||||||||||
Sbjct: 175474 cattgcagacttctcccgaagaca 175497
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>emb|AJ410493.1|SHE410493 Saimiriine herpesvirus 2 complete L-DNA sequence, strain C488
          Length = 113027

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   agcaagtgtaacagcaacaa 436
             ||||||||||||||||||||
Sbjct: 77954 agcaagtgtaacagcaacaa 77973
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>gb|AC116335.2| Homo sapiens chromosome 5 clone CTD-2297M2, complete sequence
          Length = 88370

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   atccttgagaatgttccaca 534
             ||||||||||||||||||||
Sbjct: 21661 atccttgagaatgttccaca 21680
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>dbj|AK134097.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830435M17 product:hypothetical protein,
            full insert sequence
          Length = 3276

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 548  gtcttcagacacagagctgg 567
            ||||||||||||||||||||
Sbjct: 2535 gtcttcagacacagagctgg 2516
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>gb|DP000030.1| Sus scrofa target 116 genomic scaffold
          Length = 380805

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 513    caatccttgagaatgttcca 532
              ||||||||||||||||||||
Sbjct: 277950 caatccttgagaatgttcca 277931
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>dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR1, CCXCR1, FYCO1),
             complete and partial cds, clone: 0659A02
          Length = 167298

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   caatccttgagaatgttcca 532
             ||||||||||||||||||||
Sbjct: 44044 caatccttgagaatgttcca 44025
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>gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, complete sequence
          Length = 156100

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 527  gttccacatggaaaaaagaa 546
            ||||||||||||||||||||
Sbjct: 8426 gttccacatggaaaaaagaa 8407
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>gb|AC019067.9| Homo sapiens BAC clone RP11-171B14 from 2, complete sequence
          Length = 169928

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   agctttctccttacacagca 420
             ||||||||||||||||||||
Sbjct: 42385 agctttctccttacacagca 42404
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>gb|AC138538.3| Homo sapiens chromosome 16 clone XXfos-87262F2, complete sequence
          Length = 36144

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   gttccacatggaaaaaagaa 546
             ||||||||||||||||||||
Sbjct: 33088 gttccacatggaaaaaagaa 33069
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>gb|AC137491.1| Homo sapiens chromosome 16 clone LA16c-340B2, complete sequence
          Length = 41700

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   gttccacatggaaaaaagaa 546
             ||||||||||||||||||||
Sbjct: 32259 gttccacatggaaaaaagaa 32240
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>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence
          Length = 202863

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 554   agacacagagctggctctga 573
             ||||||||||||||||||||
Sbjct: 61369 agacacagagctggctctga 61350
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>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence
          Length = 199260

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 554    agacacagagctggctctga 573
              ||||||||||||||||||||
Sbjct: 150747 agacacagagctggctctga 150766
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>emb|AJ131939.1|SHE131939 Herpesvirus saimiri SHV2 C488 ORF56 (partial) and ORF57 promoter
          Length = 1729

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 417  agcaagtgtaacagcaacaa 436
            ||||||||||||||||||||
Sbjct: 1568 agcaagtgtaacagcaacaa 1587
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>gb|AC150802.3| Equus caballus clone CH241-121C14, complete sequence
          Length = 57311

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   caatccttgagaatgttcca 532
             ||||||||||||||||||||
Sbjct: 54231 caatccttgagaatgttcca 54212
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>emb|AL929005.7| Zebrafish DNA sequence from clone CH211-223P8, complete sequence
          Length = 166364

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 524   aatgttccacatggaaaaaa 543
             ||||||||||||||||||||
Sbjct: 38163 aatgttccacatggaaaaaa 38182
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>gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromosome ul, complete sequence
          Length = 174599

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 342    acatcacatgtgaaaggaaatcat 365
              |||| |||||||||||||||||||
Sbjct: 118611 acatgacatgtgaaaggaaatcat 118634
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>gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome 12, complete sequence
          Length = 198777

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   gtcttcagacacagagctgg 567
             ||||||||||||||||||||
Sbjct: 36486 gtcttcagacacagagctgg 36505
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>emb|BX465834.20| Zebrafish DNA sequence from clone CH211-202E12 in linkage group 5,
             complete sequence
          Length = 176520

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   acatggaaaaaagaaggtct 551
             ||||||||||||||||||||
Sbjct: 23134 acatggaaaaaagaaggtct 23115
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>gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, complete sequence
          Length = 182926

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 546   aggtcttcagacacagagct 565
             ||||||||||||||||||||
Sbjct: 41188 aggtcttcagacacagagct 41169
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>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    aacaatgctatatcaaccct 206
              ||||||||||||||||||||
Sbjct: 721281 aacaatgctatatcaaccct 721262
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>gb|AC093241.4| Homo sapiens chromosome 5 clone RP11-104B22, complete sequence
          Length = 56726

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   atccttgagaatgttccaca 534
             ||||||||||||||||||||
Sbjct: 53124 atccttgagaatgttccaca 53143
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>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   tgtctgtcattcctttgtca 173
             ||||||||||||||||||||
Sbjct: 31796 tgtctgtcattcctttgtca 31777
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 513     caatccttgagaatgttcca 532
               ||||||||||||||||||||
Sbjct: 1234865 caatccttgagaatgttcca 1234846



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 513     caatccttgagaatgttcca 532
               ||||||||||||||||||||
Sbjct: 1075815 caatccttgagaatgttcca 1075834
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>gb|M21943.1|HSV52K Hepesvirus saimiri 52 kDa immediate-early phosphoprotein gene,
           complete cds
          Length = 2220

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 417 agcaagtgtaacagcaacaa 436
           ||||||||||||||||||||
Sbjct: 555 agcaagtgtaacagcaacaa 574
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>gb|M86409.1|HSV3PRGEN Herpesvirus saimiri the most three prime end of the genome
          Length = 43658

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 417  agcaagtgtaacagcaacaa 436
            ||||||||||||||||||||
Sbjct: 8820 agcaagtgtaacagcaacaa 8839


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,391,587
Number of Sequences: 3902068
Number of extensions: 6391587
Number of successful extensions: 118109
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117717
Number of HSP's gapped (non-prelim): 391
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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