>dbj|AB032840.1| Hordeum vulgare HVA/68 mRNA for vacuolar proton-ATPase, complete cds
          Length = 2281

 Score =  131 bits (66), Expect = 4e-28
 Identities = 84/93 (90%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctgaaaaaacaaggctgtctgtctgtcgcnnnnnnnggggatcctgaancgtaattcgca 60
            |||||||||||||||||||||||||||||       |||||||||||| |||||||||||
Sbjct: 2089 ctgaaaaaacaaggctgtctgtctgtcgcaaaaaaaggggatcctgaaacgtaattcgca 2030

                                             
Query: 61   tctacacaaactntggtgaagcaaaagcaaatt 93
            |||||||||||| ||||||||||||||||||||
Sbjct: 2029 tctacacaaactctggtgaagcaaaagcaaatt 1997

>gb|U36939.1|HVU36939 Hordeum vulgare vacuolar ATPase catalytic subunit mRNA, partial cds
          Length = 2089

 Score =  123 bits (62), Expect = 9e-26
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctgaaaaaacaaggctgtctgtctgtcgcnnnnnnnggggatcctgaancgtaattcgca 60
            |||||||||||||||||||||||||||||       |||||||||||| |||||||||||
Sbjct: 1912 ctgaaaaaacaaggctgtctgtctgtcgcaaaaaaaggggatcctgaaacgtaattcgca 1853

                                             
Query: 61   tctacacaaactntggtgaagcaaaagcaaatt 93
            ||||||||||||  |||||||||||||||||||
Sbjct: 1852 tctacacaaactccggtgaagcaaaagcaaatt 1820

>gb|DQ432014.1| Triticum aestivum vacuolar proton-ATPase subunit A mRNA, complete cds
          Length = 2358

 Score = 71.9 bits (36), Expect = 3e-10
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 37   ggggatcctgaancgtaattcgcatctacacaaactntggtgaagcaaaa 86
            |||| ||||||| |||||||||||||||||||||||  ||||||||||||
Sbjct: 2112 gggggtcctgaaacgtaattcgcatctacacaaactccggtgaagcaaaa 2063



 Score = 50.1 bits (25), Expect = 0.001
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 3    gaaaaaacaaggctgtctgtctgtc 27
            |||||||||||||||||||||||||
Sbjct: 2158 gaaaaaacaaggctgtctgtctgtc 2134

>emb|CR391627.1| Gallus gallus finished cDNA, clone ChEST893o3
          Length = 1074

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   aaaacaaggctgtctgtctg 25
           ||||||||||||||||||||
Sbjct: 747 aaaacaaggctgtctgtctg 728

>emb|AL139812.11| Human DNA sequence from clone RP1-19N1 on chromosome Xq21.33-22.3
              Contains the gene for a novel protein similar to
              chondroitin sulfate GalNAcT-2 (GALNACT-2), complete
              sequence
          Length = 144242

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 8      aacaaggctgtctgtctgt 26
              |||||||||||||||||||
Sbjct: 101268 aacaaggctgtctgtctgt 101250

>ref|XM_344085.2| PREDICTED: Rattus norvegicus similar to hypothetical protein
           MGC40499 (predicted) (LOC363886), mRNA
          Length = 1449

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  ggtgaagcaaaagcaaatt 93
           |||||||||||||||||||
Sbjct: 902 ggtgaagcaaaagcaaatt 920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 949,177
Number of Sequences: 3902068
Number of extensions: 949177
Number of successful extensions: 246967
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 246957
Number of HSP's gapped (non-prelim): 8
length of query: 93
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 72
effective length of database: 17,151,101,840
effective search space: 1234879332480
effective search space used: 1234879332480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)