ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1j06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009534.1| Triticum aestivum clone wr1.pk0134.e8:fis, full i... 597 e-167
2dbj|AK066890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 147 4e-32
5emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb... 147 4e-32
6emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb... 147 4e-32
7gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
8gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 1... 139 1e-29
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
11gb|AY109426.1| Zea mays CL60_1 mRNA sequence 111 2e-21
12gb|AY108166.1| Zea mays PCO062200 mRNA sequence 105 1e-19
13emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa... 98 3e-17
14gb|AY111863.1| Zea mays CL60_-3 mRNA sequence 58 3e-05
15gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete seq... 52 0.002
16ref|NM_106063.2| Arabidopsis thaliana IMS1 AT1G74040 (IMS1) mRNA... 50 0.007
17gb|BT000815.1| Arabidopsis thaliana putative 2-isopropylmalate s... 50 0.007
18gb|AY057659.1| Arabidopsis thaliana At1g74040/F2P9_9 mRNA, compl... 50 0.007
19emb|BX818710.1|CNS0AAJ5 Arabidopsis thaliana Full-length cDNA Co... 50 0.007
20emb|BX816842.1|CNS0AAKS Arabidopsis thaliana Full-length cDNA Co... 50 0.007
21gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P... 50 0.007
22gb|AF327647.1| Arabidopsis thaliana 2-isopropylmalate synthase (... 50 0.007
23dbj|AK118569.1| Arabidopsis thaliana At1g74040 mRNA for putative... 50 0.007
24gb|AF004165.1|AF004165 Lycopersicon pennellii 2-isopropylmalate ... 44 0.42
25ref|NM_101708.2| Arabidopsis thaliana 2-isopropylmalate synthase... 42 1.7
26gb|AC120863.9| Mus musculus chromosome 7, clone RP23-84H3, compl... 42 1.7
27gb|DQ143886.1| Brassica insularis 2-isopropylmalate synthase 1 (... 42 1.7
28emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chro... 42 1.7
29gb|AC013354.6|AC013354 Genomic sequence for Arabidopsis thaliana... 42 1.7
30gb|AF228732.1|AF228732 Stylonychia lemnae cathepsin L gene, part... 42 1.7
31gb|AC152123.1| Genomic sequence for broccoli [Brassica oleracea ... 42 1.7
32dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 1.7
33ref|NM_179905.1| Arabidopsis thaliana RNA polymerase I transcrip... 40 6.5
34ref|XM_636933.1| Dictyostelium discoideum hypothetical protein (... 40 6.5
35gb|AC109149.15| Mus musculus chromosome 19, clone RP24-178F17, c... 40 6.5
36gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.5
37ref|NM_003919.1| Homo sapiens sarcoglycan, epsilon (SGCE), mRNA 40 6.5
38gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromo... 40 6.5
39gb|AC069292.12| Homo sapiens BAC clone RP11-648L18 from 7, compl... 40 6.5
40ref|XM_569997.1| Cryptococcus neoformans var. neoformans JEC21 D... 40 6.5
41gb|AY359042.1| Homo sapiens clone DNA53987 SGCE (UNQ433) mRNA, c... 40 6.5
42emb|BX664725.10| Human DNA sequence from clone RP11-96J15 on chr... 40 6.5
43emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chro... 40 6.5
44emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chr... 40 6.5
45emb|AL445256.18| Human DNA sequence from clone RP11-167K24 on ch... 40 6.5
46gb|AY142672.1| Arabidopsis thaliana unknown protein (At2g34750) ... 40 6.5
47gb|AY096642.1| Arabidopsis thaliana unknown protein (At2g34750) ... 40 6.5
48gb|BC021709.2| Homo sapiens sarcoglycan, epsilon, mRNA (cDNA clo... 40 6.5
49gb|AC162391.9| Mus musculus 6 BAC RP23-126H2 (Roswell Park Cance... 40 6.5
50emb|CR622102.1| full-length cDNA clone CS0DI017YJ08 of Placenta ... 40 6.5
51emb|CR606329.1| full-length cDNA clone CS0DI008YP01 of Placenta ... 40 6.5
52emb|CR597920.1| full-length cDNA clone CS0DI017YN01 of Placenta ... 40 6.5
53emb|CR596310.1| full-length cDNA clone CS0DI034YM08 of Placenta ... 40 6.5
54emb|CR591589.1| full-length cDNA clone CL0BB018ZF09 of Neuroblas... 40 6.5
55gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 ma... 40 6.5
56gb|AC015724.9| Homo sapiens chromosome 17, clone RP11-45J24, com... 40 6.5
57gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosom... 40 6.5
58gb|AC140054.5| Mus musculus BAC clone RP23-117L24 from chromosom... 40 6.5
59dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
60emb|BX820122.1|CNS0AAFP Arabidopsis thaliana Full-length cDNA Co... 40 6.5
61gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, comple... 40 6.5
62emb|BX510317.5| Zebrafish DNA sequence from clone CH211-229G14 i... 40 6.5
63dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 6.5
64dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
65dbj|AB117974.1| Homo sapiens ESG mRNA for brain epsilon-sarcogly... 40 6.5
66gb|AC158181.2| Selaginella moellendorffii clone JGIASXY-5D1, com... 40 6.5
67emb|AJ000534.1|HEEPSSARC Homo sapiens mRNA for epsilon-sarcoglycan 40 6.5
68gb|BT024183.1| Zea mays clone EL01N0417B02 mRNA sequence 40 6.5
69gb|AC005553.1|AC005553 Homo sapiens chromosome 17, clone hRPK.11... 40 6.5
70gb|AC116703.10| Mus musculus chromosome 6, clone RP23-16O17, com... 40 6.5
71emb|CT030640.9| Mouse DNA sequence from clone RP24-78F21 on chro... 40 6.5
72emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on ch... 40 6.5
73gb|AF031920.1|AF031920 Homo sapiens epsilon-sarcoglycan mRNA, pa... 40 6.5
74gb|AF036364.1|AF036364 Homo sapiens epsilon-sarcoglycan (ESG) mR... 40 6.5
75gb|AF004166.1|AF004166 Lycopersicon pennellii 2-isopropylmalate ... 40 6.5 
>gb|BT009534.1| Triticum aestivum clone wr1.pk0134.e8:fis, full insert mRNA sequence
          Length = 1216

 Score =  597 bits (301), Expect = e-167
 Identities = 382/409 (93%)
 Strand = Plus / Minus

                                                                        
Query: 76   ttcacattgctccggggatgaaataacagaaaagaaatgtgatgtaaacactcattctgt 135
            ||||||||||||| ||||||| ||||| ||||||||||||  ||||||| ||||||||||
Sbjct: 1040 ttcacattgctccagggatgacataaccgaaaagaaatgtagtgtaaacgctcattctgt 981

                                                                        
Query: 136  ggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcgccaacaaaact 195
            ||||||| |||| | ||||||||||||| ||||||||||||||| ||| |||||| ||||
Sbjct: 980  ggtctgaacactaatggtttcaggtgcttcgctgctggcttttacagcaccaacataact 921

                                                                        
Query: 196  ggacatcttgttcagggcgctcaggtaagctcggacactggatacaacaacatccatggc 255
            ||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 920  ggacatcttattcagggcactgaggtaagctcggacactggatacgacaacatccatggc 861

                                                                        
Query: 256  tgcaccactcccactgaaggatcgattggagtgaccagtcaaagcatatttattggcact 315
            ||| |||||||||||||||||||||||||||| || ||||||||||  ||||| ||| ||
Sbjct: 860  tgcgccactcccactgaaggatcgattggagttactagtcaaagcaggtttatcggcgct 801

                                                                        
Query: 316  gacatctccagtgatgactactcgagtggttgcaattgcatcaatgccttctgtgaccga 375
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800  gacatctccagcgatgactactcgagtggttgcaattgcatcaatgccttctgtgaccga 741

                                                                        
Query: 376  agtcatgctatattctctaagaatagttggaatctgtattatttggtcaacagccttgta 435
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 740  agtcatgctatattctctaagaacagttggaatctgtattatttggtcaacagccttgta 681

                                                             
Query: 436  tgctgcatcaactgggccagttccaacagaacaacctatcttttcctct 484
            ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 680  tgctgcatcaactgggccagttccaacagaacatcctatcttttcctct 632



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 38   cccttacactaccaaacagctctttactaacatg 71
            ||||||||| ||||||||||||||||||||||||
Sbjct: 1106 cccttacaccaccaaacagctctttactaacatg 1073
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>dbj|AK066890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088L20, full
            insert sequence
          Length = 2358

 Score =  291 bits (147), Expect = 1e-75
 Identities = 293/341 (85%), Gaps = 3/341 (0%)
 Strand = Plus / Minus

                                                                        
Query: 125  actcattctgtggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcg 184
            |||||||||||||| ||| | ||| || |||||| | || | || || || || ||||| 
Sbjct: 2112 actcattctgtggtttgaactctttggctttcagatacttcactactagccttgatagcc 2053

                                                                        
Query: 185  ccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactggatacaaca 244
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 2052 ccaacaaaactggacatcttgttcagggcactcaggtaagctcgcacactggaaacaaca 1993

                                                                        
Query: 245  acatccatggctgcaccactcccactgaaggatcgattg---gagtgaccagtcaaagca 301
            | |||||  || ||||||||||||||||| |  || |||   ||||||||||||||||||
Sbjct: 1992 atatccagtgcggcaccactcccactgaatgcccggttgaaggagtgaccagtcaaagca 1933

                                                                        
Query: 302  tatttattggcactgacatctccagtgatgactactcgagtggttgcaattgcatcaatg 361
            | ||||  | | ||||||||||||||||  || |||| ||| ||||||||||||||||||
Sbjct: 1932 tgtttagagtcgctgacatctccagtgacaaccactctagtagttgcaattgcatcaatg 1873

                                                                        
Query: 362  ccttctgtgaccgaagtcatgctatattctctaagaatagttggaatctgtattatttgg 421
            |||||||||||||| |||||||||||||||| ||||| |||||| ||||||||||| |  
Sbjct: 1872 ccttctgtgaccgatgtcatgctatattctcgaagaacagttgggatctgtattatatca 1813

                                                     
Query: 422  tcaacagccttgtatgctgcatcaactgggccagttccaac 462
            |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 1812 tcaacagccttgtaagctgcatcaactggacctgttccaac 1772
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  147 bits (74), Expect = 4e-32
 Identities = 116/130 (89%)
 Strand = Plus / Minus

                                                                           
Query: 283     ggagtgaccagtcaaagcatatttattggcactgacatctccagtgatgactactcgagt 342
               |||||||||||||||||||| ||||  | | ||||||||||||||||  || |||| |||
Sbjct: 1893341 ggagtgaccagtcaaagcatgtttagagtcgctgacatctccagtgacaaccactctagt 1893282

                                                                           
Query: 343     ggttgcaattgcatcaatgccttctgtgaccgaagtcatgctatattctctaagaatagt 402
                |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 1893281 agttgcaattgcatcaatgccttctgtgaccgatgtcatgctatattctcgaagaacagt 1893222

                         
Query: 403     tggaatctgt 412
               ||| ||||||
Sbjct: 1893221 tgggatctgt 1893212



 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                           
Query: 125     actcattctgtggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcg 184
               |||||||||||||| ||| | ||| || |||||| | || | || || || || ||||| 
Sbjct: 1893631 actcattctgtggtttgaactctttggctttcagatacttcactactagccttgatagcc 1893572

                                                                           
Query: 185     ccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactggatacaaca 244
               ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1893571 ccaacaaaactggacatcttgttcagggcactcaggtaagctcgcacactggaaacaaca 1893512

                                           
Query: 245     acatccatggctgcaccactcccactga 272
               | |||||  || ||||||||||||||||
Sbjct: 1893511 atatccagtgcggcaccactcccactga 1893484



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 80/89 (89%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                            
Query: 185      ccaacaaaactggacatctt-gttcagggcgctcaggtaagctcggacactggatacaac 243
                |||||||||||||||||||| ||||||||| |||||||||||||| |||||||| |||||
Sbjct: 24704620 ccaacaaaactggacatctttgttcagggcactcaggtaagctcgcacactggaaacaac 24704561

                                             
Query: 244      aacatccatggctgcaccactcccactga 272
                || |||||  || ||||| ||||||||||
Sbjct: 24704560 aatatccagtgcggcacctctcccactga 24704532



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                           
Query: 344      gttgcaattgcatcaatgccttctgtgaccgaagtcatgctat 386
                |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 24704324 gttgcaattgcatcaatgccttctgttaccgatgtcatgctat 24704282



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                     
Query: 409     ctgtattatttggtcaacagccttgtatgctgcatcaactgggccagttccaac 462
               ||||||||| |  |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 1892855 ctgtattatatcatcaacagccttgtaagctgcatcaactggacctgttccaac 1892802
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  147 bits (74), Expect = 4e-32
 Identities = 116/130 (89%)
 Strand = Plus / Minus

                                                                           
Query: 283     ggagtgaccagtcaaagcatatttattggcactgacatctccagtgatgactactcgagt 342
               |||||||||||||||||||| ||||  | | ||||||||||||||||  || |||| |||
Sbjct: 1893292 ggagtgaccagtcaaagcatgtttagagtcgctgacatctccagtgacaaccactctagt 1893233

                                                                           
Query: 343     ggttgcaattgcatcaatgccttctgtgaccgaagtcatgctatattctctaagaatagt 402
                |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 1893232 agttgcaattgcatcaatgccttctgtgaccgatgtcatgctatattctcgaagaacagt 1893173

                         
Query: 403     tggaatctgt 412
               ||| ||||||
Sbjct: 1893172 tgggatctgt 1893163



 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                           
Query: 125     actcattctgtggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcg 184
               |||||||||||||| ||| | ||| || |||||| | || | || || || || ||||| 
Sbjct: 1893582 actcattctgtggtttgaactctttggctttcagatacttcactactagccttgatagcc 1893523

                                                                           
Query: 185     ccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactggatacaaca 244
               ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1893522 ccaacaaaactggacatcttgttcagggcactcaggtaagctcgcacactggaaacaaca 1893463

                                           
Query: 245     acatccatggctgcaccactcccactga 272
               | |||||  || ||||||||||||||||
Sbjct: 1893462 atatccagtgcggcaccactcccactga 1893435



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 80/89 (89%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                            
Query: 185      ccaacaaaactggacatctt-gttcagggcgctcaggtaagctcggacactggatacaac 243
                |||||||||||||||||||| ||||||||| |||||||||||||| |||||||| |||||
Sbjct: 24632826 ccaacaaaactggacatctttgttcagggcactcaggtaagctcgcacactggaaacaac 24632767

                                             
Query: 244      aacatccatggctgcaccactcccactga 272
                || |||||  || ||||| ||||||||||
Sbjct: 24632766 aatatccagtgcggcacctctcccactga 24632738



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                           
Query: 344      gttgcaattgcatcaatgccttctgtgaccgaagtcatgctat 386
                |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 24632530 gttgcaattgcatcaatgccttctgttaccgatgtcatgctat 24632488



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                     
Query: 409     ctgtattatttggtcaacagccttgtatgctgcatcaactgggccagttccaac 462
               ||||||||| |  |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 1892806 ctgtattatatcatcaacagccttgtaagctgcatcaactggacctgttccaac 1892753
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>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128619

 Score =  147 bits (74), Expect = 4e-32
 Identities = 116/130 (89%)
 Strand = Plus / Minus

                                                                         
Query: 283   ggagtgaccagtcaaagcatatttattggcactgacatctccagtgatgactactcgagt 342
             |||||||||||||||||||| ||||  | | ||||||||||||||||  || |||| |||
Sbjct: 88032 ggagtgaccagtcaaagcatgtttagagtcgctgacatctccagtgacaaccactctagt 87973

                                                                         
Query: 343   ggttgcaattgcatcaatgccttctgtgaccgaagtcatgctatattctctaagaatagt 402
              |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 87972 agttgcaattgcatcaatgccttctgtgaccgatgtcatgctatattctcgaagaacagt 87913

                       
Query: 403   tggaatctgt 412
             ||| ||||||
Sbjct: 87912 tgggatctgt 87903



 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                         
Query: 125   actcattctgtggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcg 184
             |||||||||||||| ||| | ||| || |||||| | || | || || || || ||||| 
Sbjct: 88322 actcattctgtggtttgaactctttggctttcagatacttcactactagccttgatagcc 88263

                                                                         
Query: 185   ccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactggatacaaca 244
             ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 88262 ccaacaaaactggacatcttgttcagggcactcaggtaagctcgcacactggaaacaaca 88203

                                         
Query: 245   acatccatggctgcaccactcccactga 272
             | |||||  || ||||||||||||||||
Sbjct: 88202 atatccagtgcggcaccactcccactga 88175



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 409   ctgtattatttggtcaacagccttgtatgctgcatcaactgggccagttccaac 462
             ||||||||| |  |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 87546 ctgtattatatcatcaacagccttgtaagctgcatcaactggacctgttccaac 87493
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>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107247

 Score =  147 bits (74), Expect = 4e-32
 Identities = 116/130 (89%)
 Strand = Plus / Plus

                                                                         
Query: 283   ggagtgaccagtcaaagcatatttattggcactgacatctccagtgatgactactcgagt 342
             |||||||||||||||||||| ||||  | | ||||||||||||||||  || |||| |||
Sbjct: 74880 ggagtgaccagtcaaagcatgtttagagtcgctgacatctccagtgacaaccactctagt 74939

                                                                         
Query: 343   ggttgcaattgcatcaatgccttctgtgaccgaagtcatgctatattctctaagaatagt 402
              |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 74940 agttgcaattgcatcaatgccttctgtgaccgatgtcatgctatattctcgaagaacagt 74999

                       
Query: 403   tggaatctgt 412
             ||| ||||||
Sbjct: 75000 tgggatctgt 75009



 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Plus

                                                                         
Query: 125   actcattctgtggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcg 184
             |||||||||||||| ||| | ||| || |||||| | || | || || || || ||||| 
Sbjct: 74590 actcattctgtggtttgaactctttggctttcagatacttcactactagccttgatagcc 74649

                                                                         
Query: 185   ccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactggatacaaca 244
             ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 74650 ccaacaaaactggacatcttgttcagggcactcaggtaagctcgcacactggaaacaaca 74709

                                         
Query: 245   acatccatggctgcaccactcccactga 272
             | |||||  || ||||||||||||||||
Sbjct: 74710 atatccagtgcggcaccactcccactga 74737



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 409   ctgtattatttggtcaacagccttgtatgctgcatcaactgggccagttccaac 462
             ||||||||| |  |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 75366 ctgtattatatcatcaacagccttgtaagctgcatcaactggacctgttccaac 75419
to top
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15,
              complete sequence
          Length = 130161

 Score =  139 bits (70), Expect = 1e-29
 Identities = 115/130 (88%)
 Strand = Plus / Minus

                                                                          
Query: 283    ggagtgaccagtcaaagcatatttattggcactgacatctccagtgatgactactcgagt 342
              |||||||||||||||||||| ||||  | | || |||||||||||||  || |||| |||
Sbjct: 115815 ggagtgaccagtcaaagcatgtttagagtcgctaacatctccagtgacaaccactctagt 115756

                                                                          
Query: 343    ggttgcaattgcatcaatgccttctgtgaccgaagtcatgctatattctctaagaatagt 402
               |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 115755 agttgcaattgcatcaatgccttctgtgaccgatgtcatgctatattctcgaagaacagt 115696

                        
Query: 403    tggaatctgt 412
              ||| ||||||
Sbjct: 115695 tgggatctgt 115686



 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                          
Query: 125    actcattctgtggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcg 184
              |||||||||||||| ||| | ||| || |||||| | || | || || || || ||||| 
Sbjct: 116108 actcattctgtggtttgaactctttggctttcagatacttcactactagccttgatagcc 116049

                                                                          
Query: 185    ccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactggatacaaca 244
              ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 116048 ccaacaaaactggacatcttgttcagggcactcaggtaagctcgcacactggaaacaaca 115989

                                          
Query: 245    acatccatggctgcaccactcccactga 272
              | |||||  || ||||||||||||||||
Sbjct: 115988 atatccagtgcggcaccactcccactga 115961



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 409    ctgtattatttggtcaacagccttgtatgctgcatcaactgggccagttccaac 462
              ||||||||| |  |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 115328 ctgtattatatcatcaacagccttgtaagctgcatcaactggacctgttccaac 115275
to top
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06,
             complete sequence
          Length = 185449

 Score =  139 bits (70), Expect = 1e-29
 Identities = 115/130 (88%)
 Strand = Plus / Minus

                                                                         
Query: 283   ggagtgaccagtcaaagcatatttattggcactgacatctccagtgatgactactcgagt 342
             |||||||||||||||||||| ||||  | | || |||||||||||||  || |||| |||
Sbjct: 48796 ggagtgaccagtcaaagcatgtttagagtcgctaacatctccagtgacaaccactctagt 48737

                                                                         
Query: 343   ggttgcaattgcatcaatgccttctgtgaccgaagtcatgctatattctctaagaatagt 402
              |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 48736 agttgcaattgcatcaatgccttctgtgaccgatgtcatgctatattctcgaagaacagt 48677

                       
Query: 403   tggaatctgt 412
             ||| ||||||
Sbjct: 48676 tgggatctgt 48667



 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                         
Query: 125   actcattctgtggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcg 184
             |||||||||||||| ||| | ||| || |||||| | || | || || || || ||||| 
Sbjct: 49089 actcattctgtggtttgaactctttggctttcagatacttcactactagccttgatagcc 49030

                                                                         
Query: 185   ccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactggatacaaca 244
             ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 49029 ccaacaaaactggacatcttgttcagggcactcaggtaagctcgcacactggaaacaaca 48970

                                         
Query: 245   acatccatggctgcaccactcccactga 272
             | |||||  || ||||||||||||||||
Sbjct: 48969 atatccagtgcggcaccactcccactga 48942



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 409   ctgtattatttggtcaacagccttgtatgctgcatcaactgggccagttccaac 462
             ||||||||| |  |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 48309 ctgtattatatcatcaacagccttgtaagctgcatcaactggacctgttccaac 48256
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  139 bits (70), Expect = 1e-29
 Identities = 115/130 (88%)
 Strand = Plus / Minus

                                                                           
Query: 283     ggagtgaccagtcaaagcatatttattggcactgacatctccagtgatgactactcgagt 342
               |||||||||||||||||||| ||||  | | || |||||||||||||  || |||| |||
Sbjct: 1977241 ggagtgaccagtcaaagcatgtttagagtcgctaacatctccagtgacaaccactctagt 1977182

                                                                           
Query: 343     ggttgcaattgcatcaatgccttctgtgaccgaagtcatgctatattctctaagaatagt 402
                |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 1977181 agttgcaattgcatcaatgccttctgtgaccgatgtcatgctatattctcgaagaacagt 1977122

                         
Query: 403     tggaatctgt 412
               ||| ||||||
Sbjct: 1977121 tgggatctgt 1977112



 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                           
Query: 125     actcattctgtggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcg 184
               |||||||||||||| ||| | ||| || |||||| | || | || || || || ||||| 
Sbjct: 1977534 actcattctgtggtttgaactctttggctttcagatacttcactactagccttgatagcc 1977475

                                                                           
Query: 185     ccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactggatacaaca 244
               ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1977474 ccaacaaaactggacatcttgttcagggcactcaggtaagctcgcacactggaaacaaca 1977415

                                           
Query: 245     acatccatggctgcaccactcccactga 272
               | |||||  || ||||||||||||||||
Sbjct: 1977414 atatccagtgcggcaccactcccactga 1977387



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                     
Query: 409     ctgtattatttggtcaacagccttgtatgctgcatcaactgggccagttccaac 462
               ||||||||| |  |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 1976754 ctgtattatatcatcaacagccttgtaagctgcatcaactggacctgttccaac 1976701
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  139 bits (70), Expect = 1e-29
 Identities = 115/130 (88%)
 Strand = Plus / Minus

                                                                           
Query: 283     ggagtgaccagtcaaagcatatttattggcactgacatctccagtgatgactactcgagt 342
               |||||||||||||||||||| ||||  | | || |||||||||||||  || |||| |||
Sbjct: 1985022 ggagtgaccagtcaaagcatgtttagagtcgctaacatctccagtgacaaccactctagt 1984963

                                                                           
Query: 343     ggttgcaattgcatcaatgccttctgtgaccgaagtcatgctatattctctaagaatagt 402
                |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 1984962 agttgcaattgcatcaatgccttctgtgaccgatgtcatgctatattctcgaagaacagt 1984903

                         
Query: 403     tggaatctgt 412
               ||| ||||||
Sbjct: 1984902 tgggatctgt 1984893



 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                           
Query: 125     actcattctgtggtctgagcacttagggtttcaggtgctgcgctgctggcttttatagcg 184
               |||||||||||||| ||| | ||| || |||||| | || | || || || || ||||| 
Sbjct: 1985315 actcattctgtggtttgaactctttggctttcagatacttcactactagccttgatagcc 1985256

                                                                           
Query: 185     ccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactggatacaaca 244
               ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1985255 ccaacaaaactggacatcttgttcagggcactcaggtaagctcgcacactggaaacaaca 1985196

                                           
Query: 245     acatccatggctgcaccactcccactga 272
               | |||||  || ||||||||||||||||
Sbjct: 1985195 atatccagtgcggcaccactcccactga 1985168



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                     
Query: 409     ctgtattatttggtcaacagccttgtatgctgcatcaactgggccagttccaac 462
               ||||||||| |  |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 1984535 ctgtattatatcatcaacagccttgtaagctgcatcaactggacctgttccaac 1984482
to top
>gb|AY109426.1| Zea mays CL60_1 mRNA sequence
          Length = 2212

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                        
Query: 317  acatctccagtgatgactactcgagtggttgcaattgcatcaatgccttctgtgaccgaa 376
            |||||||||||||  || || ||||| || || ||||| ||||||||||||||||| || 
Sbjct: 1717 acatctccagtgacaacaacccgagttgtcgcgattgcgtcaatgccttctgtgactgat 1658

                                                                        
Query: 377  gtcatgctatattctctaagaatagttggaatctgtattatttggtcaacagccttgtat 436
            ||||| || |||||||  ||||  ||||||||||| ||||||| ||||||||||||||| 
Sbjct: 1657 gtcatactgtattctcggagaaccgttggaatctggattattttgtcaacagccttgtaa 1598

                                            
Query: 437  gctgcatcaactgggccagttccaacagaaca 468
            |||||||| ||||| || ||||| || |||||
Sbjct: 1597 gctgcatcgactggacctgttccgactgaaca 1566



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                        
Query: 165  cgctgctggcttttatagcgccaacaaaactggacatcttgttcagggcgctcaggtaag 224
            ||||||||||||| |  |||||| | |||||| | |||||||||||||||||||||||||
Sbjct: 1875 cgctgctggctttcacggcgccagcgaaactgcagatcttgttcagggcgctcaggtaag 1816

                                                                
Query: 225  ctcggacactggatacaacaacatccatggctgcaccactcccactgaagga 276
            ||| ||||||||| || ||||  ||||||| ||| || ||||| ||||||||
Sbjct: 1815 ctctgacactggacaccacaatgtccatggatgccccgctcccgctgaagga 1764
to top
>gb|AY108166.1| Zea mays PCO062200 mRNA sequence
          Length = 1539

 Score =  105 bits (53), Expect = 1e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                        
Query: 344  gttgcaattgcatcaatgccttctgtgaccgaagtcatgctatattctctaagaatagtt 403
            ||||| ||||| || |||||||| ||||| || ||||| | ||||||||  |||| ||||
Sbjct: 1006 gttgcgattgcgtcgatgccttcggtgactgaggtcataccatattctcggagaacagtt 947

                                                                        
Query: 404  ggaatctgtattatttggtcaacagccttgtatgctgcatcaactgggccagttccaaca 463
            || ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||| 
Sbjct: 946  gggatctggattatttggtcaatagccttgtaagctgcatcaactggacctgttccaact 887

                 
Query: 464  gaaca 468
            |||||
Sbjct: 886  gaaca 882



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 198  acatcttgttcagggcgctcaggtaagctcggacactggatacaacaacatccatggctg 257
            |||||||||||||||| ||||||||||||| ||||||||| || || |  ||||| ||||
Sbjct: 1158 acatcttgttcagggcactcaggtaagctctgacactggagacgacgatgtccattgctg 1099

                               
Query: 258  caccactcccactgaagga 276
            | || ||||| ||||||||
Sbjct: 1098 ccccgctcccgctgaagga 1080
to top
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 140383

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 80/89 (89%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                         
Query: 185   ccaacaaaactggacatctt-gttcagggcgctcaggtaagctcggacactggatacaac 243
             |||||||||||||||||||| ||||||||| |||||||||||||| |||||||| |||||
Sbjct: 11777 ccaacaaaactggacatctttgttcagggcactcaggtaagctcgcacactggaaacaac 11718

                                          
Query: 244   aacatccatggctgcaccactcccactga 272
             || |||||  || ||||| ||||||||||
Sbjct: 11717 aatatccagtgcggcacctctcccactga 11689



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                        
Query: 344   gttgcaattgcatcaatgccttctgtgaccgaagtcatgctat 386
             |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 11481 gttgcaattgcatcaatgccttctgttaccgatgtcatgctat 11439
to top
>gb|AY111863.1| Zea mays CL60_-3 mRNA sequence
          Length = 516

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 181 agcgccaacaaaactggacatcttgttcagggcgctcaggtaagctcggacactgga 237
           ||||||| | || ||| |||||||||||||||| ||||||||||||| ||| |||||
Sbjct: 212 agcgccagcgaagctgcacatcttgttcagggcactcaggtaagctctgacgctgga 156



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 335 actcgagtggttgcaattgcatcaatgccttctgtgaccgaagtcatgc 383
           |||||||| || ||||| || ||||||||||||||||| |||| |||||
Sbjct: 52  actcgagtcgtcgcaatagcgtcaatgccttctgtgactgaaggcatgc 4
to top
>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
          Length = 113632

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 335   actcgagtggttgcaattgcatcaatgccttctgtgac 372
             |||||||| || |||||||||||||||||||| |||||
Sbjct: 30663 actcgagtagtggcaattgcatcaatgccttcagtgac 30626
to top
>ref|NM_106063.2| Arabidopsis thaliana IMS1 AT1G74040 (IMS1) mRNA, complete cds
          Length = 2193

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 341  gtggttgcaattgcatcaatgccttctgt 369
            ||||||||||| |||||||||||||||||
Sbjct: 1766 gtggttgcaatagcatcaatgccttctgt 1738



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 422  tcaacagccttgtatgctgcatcaactgggccagttccaacagaacaa 469
            ||||| |||||||| |||||||| || || || |||||||||||||||
Sbjct: 1685 tcaactgccttgtaagctgcatctacaggtccggttccaacagaacaa 1638
to top
>gb|BT000815.1| Arabidopsis thaliana putative 2-isopropylmalate synthase
            (At1g74040/F2P9_9) mRNA, complete cds
          Length = 1896

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 341  gtggttgcaattgcatcaatgccttctgt 369
            ||||||||||| |||||||||||||||||
Sbjct: 1679 gtggttgcaatagcatcaatgccttctgt 1651



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 422  tcaacagccttgtatgctgcatcaactgggccagttccaacagaacaa 469
            ||||| |||||||| |||||||| || || || |||||||||||||||
Sbjct: 1598 tcaactgccttgtaagctgcatctacaggtccggttccaacagaacaa 1551
to top
>gb|AY057659.1| Arabidopsis thaliana At1g74040/F2P9_9 mRNA, complete cds
          Length = 2194

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 341  gtggttgcaattgcatcaatgccttctgt 369
            ||||||||||| |||||||||||||||||
Sbjct: 1766 gtggttgcaatagcatcaatgccttctgt 1738



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 422  tcaacagccttgtatgctgcatcaactgggccagttccaacagaacaa 469
            ||||| |||||||| |||||||| || || || |||||||||||||||
Sbjct: 1685 tcaactgccttgtaagctgcatctacaggtccggttccaacagaacaa 1638
to top
>emb|BX818710.1|CNS0AAJ5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL94ZA04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 863

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 341 gtggttgcaattgcatcaatgccttctgt 369
           ||||||||||| |||||||||||||||||
Sbjct: 488 gtggttgcaatagcatcaatgccttctgt 460



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 422 tcaacagccttgtatgctgcatcaactgggccagttccaacagaacaa 469
           ||||| |||||||| |||||||| || || || |||||||||||||||
Sbjct: 407 tcaactgccttgtaagctgcatctacaggtccggttccaacagaacaa 360
to top
>emb|BX816842.1|CNS0AAKS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH70ZH08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2148

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 341  gtggttgcaattgcatcaatgccttctgt 369
            ||||||||||| |||||||||||||||||
Sbjct: 1740 gtggttgcaatagcatcaatgccttctgt 1712



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 422  tcaacagccttgtatgctgcatcaactgggccagttccaacagaacaa 469
            ||||| |||||||| |||||||| || || || |||||||||||||||
Sbjct: 1659 tcaactgccttgtaagctgcatctacaggtccggttccaacagaacaa 1612
to top
>gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P9 genomic sequence, complete
             sequence
          Length = 108387

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 341   gtggttgcaattgcatcaatgccttctgt 369
             ||||||||||| |||||||||||||||||
Sbjct: 27945 gtggttgcaatagcatcaatgccttctgt 27973



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 422   tcaacagccttgtatgctgcatcaactgggccagttccaacagaacaa 469
             ||||| |||||||| |||||||| || || || |||||||||||||||
Sbjct: 28116 tcaactgccttgtaagctgcatctacaggtccggttccaacagaacaa 28163
to top
>gb|AF327647.1| Arabidopsis thaliana 2-isopropylmalate synthase (IMS1) mRNA, complete
            cds
          Length = 1896

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 341  gtggttgcaattgcatcaatgccttctgt 369
            ||||||||||| |||||||||||||||||
Sbjct: 1679 gtggttgcaatagcatcaatgccttctgt 1651



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 422  tcaacagccttgtatgctgcatcaactgggccagttccaacagaacaa 469
            ||||| |||||||| |||||||| || || || |||||||||||||||
Sbjct: 1598 tcaactgccttgtaagctgcatctacaggtccggttccaacagaacaa 1551
to top
>dbj|AK118569.1| Arabidopsis thaliana At1g74040 mRNA for putative 2-isopropylmalate
            synthase, complete cds, clone: RAFL19-80-C13
          Length = 2121

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 341  gtggttgcaattgcatcaatgccttctgt 369
            ||||||||||| |||||||||||||||||
Sbjct: 1766 gtggttgcaatagcatcaatgccttctgt 1738



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 422  tcaacagccttgtatgctgcatcaactgggccagttccaacagaacaa 469
            ||||| |||||||| |||||||| || || || |||||||||||||||
Sbjct: 1685 tcaactgccttgtaagctgcatctacaggtccggttccaacagaacaa 1638
to top
>gb|AF004165.1|AF004165 Lycopersicon pennellii 2-isopropylmalate synthase (lp-ipmsa) mRNA,
            complete cds
          Length = 2165

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 428  gccttgtatgctgcatcaactgggccagttccaacagaacaa 469
            |||||||| ||||||||||| || || |||||||| ||||||
Sbjct: 1581 gccttgtaagctgcatcaacaggtcctgttccaactgaacaa 1540
to top
>ref|NM_101708.2| Arabidopsis thaliana 2-isopropylmalate synthase/ catalytic/
            transferase, transferring acyl groups, acyl groups
            converted into alkyl on transfer AT1G18500 mRNA, complete
            cds
          Length = 2060

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 341  gtggttgcaattgcatcaatgccttctgt 369
            |||||||| || |||||||||||||||||
Sbjct: 1685 gtggttgcgatggcatcaatgccttctgt 1657
to top
>gb|AC120863.9| Mus musculus chromosome 7, clone RP23-84H3, complete sequence
          Length = 241742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 110    aaatgtgatgtaaacactcattctgtggtctga 142
              |||||||| |||| |||||| ||||||||||||
Sbjct: 117256 aaatgtgaagtaatcactcagtctgtggtctga 117224
to top
>gb|DQ143886.1| Brassica insularis 2-isopropylmalate synthase 1 (IMS) mRNA, complete
            cds
          Length = 2044

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 341  gtggttgcaattgcatcaatgccttctgt 369
            ||||||||||| ||||| |||||||||||
Sbjct: 1661 gtggttgcaatggcatcgatgccttctgt 1633
to top
>emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chromosome 11, complete
             sequence
          Length = 155196

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 99    taacagaaaagaaatgtgatgtaaa 123
             |||||||||| ||||||||||||||
Sbjct: 75821 taacagaaaaaaaatgtgatgtaaa 75845
to top
>gb|AC013354.6|AC013354 Genomic sequence for Arabidopsis thaliana BAC F15H18 from chromosome
            I, complete sequence
          Length = 95327

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 341  gtggttgcaattgcatcaatgccttctgt 369
            |||||||| || |||||||||||||||||
Sbjct: 4095 gtggttgcgatggcatcaatgccttctgt 4123
to top
>gb|AF228732.1|AF228732 Stylonychia lemnae cathepsin L gene, partial cds
          Length = 542

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 tttggtcaacagccttgtatg 437
           |||||||||||||||||||||
Sbjct: 238 tttggtcaacagccttgtatg 218
to top
>gb|AC152123.1| Genomic sequence for broccoli [Brassica oleracea L. (Italica group)]
             BAC clone B21F5, complete sequence
          Length = 82329

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 341   gtggttgcaattgcatcaatgccttctgt 369
             ||||||||||| ||||| |||||||||||
Sbjct: 79913 gtggttgcaatggcatcgatgccttctgt 79885
to top
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001,
             complete sequence
          Length = 103397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 351   ttgcatcaatgccttctgtga 371
             |||||||||||||||||||||
Sbjct: 59143 ttgcatcaatgccttctgtga 59163
to top
>ref|NM_179905.1| Arabidopsis thaliana RNA polymerase I transcription factor AT2G34750
            mRNA, complete cds
          Length = 2175

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tggacatcttgttcagggcg 214
            ||||||||||||||||||||
Sbjct: 1936 tggacatcttgttcagggcg 1917
to top
>ref|XM_636933.1| Dictyostelium discoideum hypothetical protein (DDB0204318), partial
            mRNA
          Length = 2052

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 270  tgaaggatcgattggagtga 289
            ||||||||||||||||||||
Sbjct: 1878 tgaaggatcgattggagtga 1859
to top
>gb|AC109149.15| Mus musculus chromosome 19, clone RP24-178F17, complete sequence
          Length = 176668

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    ttggaatctgtattatttgg 421
              ||||||||||||||||||||
Sbjct: 110124 ttggaatctgtattatttgg 110105
to top
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 300     catatttattggcactgaca 319
               ||||||||||||||||||||
Sbjct: 1216119 catatttattggcactgaca 1216100
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>ref|NM_003919.1| Homo sapiens sarcoglycan, epsilon (SGCE), mRNA
          Length = 1658

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1452 agaaaagaaatgtgatgtaa 1433
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>gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromosome 9, complete
              sequence
          Length = 162544

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     taacagaaaagaaatgtgat 118
              ||||||||||||||||||||
Sbjct: 158029 taacagaaaagaaatgtgat 158010
to top
>gb|AC069292.12| Homo sapiens BAC clone RP11-648L18 from 7, complete sequence
          Length = 159624

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   agaaaagaaatgtgatgtaa 122
             ||||||||||||||||||||
Sbjct: 11641 agaaaagaaatgtgatgtaa 11660
to top
>ref|XM_569997.1| Cryptococcus neoformans var. neoformans JEC21 DNA supercoiling
            (CNC03920) partial mRNA
          Length = 3054

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  catatttattggcactgaca 319
            ||||||||||||||||||||
Sbjct: 2558 catatttattggcactgaca 2539
to top
>gb|AY359042.1| Homo sapiens clone DNA53987 SGCE (UNQ433) mRNA, complete cds
          Length = 1615

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1401 agaaaagaaatgtgatgtaa 1382
to top
>emb|BX664725.10| Human DNA sequence from clone RP11-96J15 on chromosome 9 Contains a
             novel pseudogene, a pseudogene similar to part of
             fibroblast growth factor 7 (keratinocyte growth factor)
             (FGF7) and a CpG island, complete sequence
          Length = 61470

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    taacagaaaagaaatgtgat 118
             ||||||||||||||||||||
Sbjct: 36449 taacagaaaagaaatgtgat 36468



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   taacagaaaagaaatgtgat 118
            ||||||||||||||||||||
Sbjct: 2274 taacagaaaagaaatgtgat 2255
to top
>emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chromosome 9 Conatins a
            pseudogene similar to part of fibroblast growth factor 7
            (keratinocyte growth factor) (FGF7), two novel
            pseudogenes, a pseudogene similar to part of G
            protein-coupled receptor 116 (GPR116), a novel gene and a
            pseudogene similar to part of meprin A, alpha (PABA
            peptide hydrolase) (MEP1A), complete sequence
          Length = 167646

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   taacagaaaagaaatgtgat 118
            ||||||||||||||||||||
Sbjct: 1883 taacagaaaagaaatgtgat 1902
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>emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chromosome 9 Contains a
             pseudogene similar to part of fibroblast growth factor 7
             (keratinocyte growth factor) (FGF7), three novel
             pseudogenes, two novel genes, a recombining binding
             protein suppressor of hairless (Drosophila) (RBPSUH)
             pseudogene, a RAB28, member RAS oncogene family (RAB28)
             pseudogene and two CpG islands, complete sequence
          Length = 202891

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    taacagaaaagaaatgtgat 118
             ||||||||||||||||||||
Sbjct: 35425 taacagaaaagaaatgtgat 35444



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   taacagaaaagaaatgtgat 118
            ||||||||||||||||||||
Sbjct: 1251 taacagaaaagaaatgtgat 1232
to top
>emb|AL445256.18| Human DNA sequence from clone RP11-167K24 on chromosome 6 Contains
            part of the RAB3IP2 gene for RAB3 interacting protein 2,
            complete sequence
          Length = 66683

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   atgaaataacagaaaagaaa 112
            ||||||||||||||||||||
Sbjct: 5162 atgaaataacagaaaagaaa 5143
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>gb|AY142672.1| Arabidopsis thaliana unknown protein (At2g34750) mRNA, complete cds
          Length = 1873

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tggacatcttgttcagggcg 214
            ||||||||||||||||||||
Sbjct: 1744 tggacatcttgttcagggcg 1725
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>gb|AY096642.1| Arabidopsis thaliana unknown protein (At2g34750) mRNA, complete cds
          Length = 2165

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tggacatcttgttcagggcg 214
            ||||||||||||||||||||
Sbjct: 1936 tggacatcttgttcagggcg 1917
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>gb|BC021709.2| Homo sapiens sarcoglycan, epsilon, mRNA (cDNA clone MGC:26495
            IMAGE:4822278), complete cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1435 agaaaagaaatgtgatgtaa 1416
to top
>gb|AC162391.9| Mus musculus 6 BAC RP23-126H2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209173

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    tagttggaatctgtattatt 418
              ||||||||||||||||||||
Sbjct: 154146 tagttggaatctgtattatt 154127
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>emb|CR622102.1| full-length cDNA clone CS0DI017YJ08 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1666

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1485 agaaaagaaatgtgatgtaa 1466
to top
>emb|CR606329.1| full-length cDNA clone CS0DI008YP01 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1580

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1389 agaaaagaaatgtgatgtaa 1370
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>emb|CR597920.1| full-length cDNA clone CS0DI017YN01 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1615

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1426 agaaaagaaatgtgatgtaa 1407
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>emb|CR596310.1| full-length cDNA clone CS0DI034YM08 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1608

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1442 agaaaagaaatgtgatgtaa 1423
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>emb|CR591589.1| full-length cDNA clone CL0BB018ZF09 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1097

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 agaaaagaaatgtgatgtaa 122
           ||||||||||||||||||||
Sbjct: 895 agaaaagaaatgtgatgtaa 876
to top
>gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 map ve016, complete
             sequence
          Length = 69817

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tggacatcttgttcagggcg 214
             ||||||||||||||||||||
Sbjct: 11984 tggacatcttgttcagggcg 11965
to top
>gb|AC015724.9| Homo sapiens chromosome 17, clone RP11-45J24, complete sequence
          Length = 189055

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   cagaaaagaaatgtgatgta 121
             ||||||||||||||||||||
Sbjct: 14394 cagaaaagaaatgtgatgta 14413
to top
>gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosome 16, complete sequence
          Length = 171693

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     atgaaataacagaaaagaaa 112
              ||||||||||||||||||||
Sbjct: 124791 atgaaataacagaaaagaaa 124810
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>gb|AC140054.5| Mus musculus BAC clone RP23-117L24 from chromosome 9, complete sequence
          Length = 222698

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 254    gctgcaccactcccactgaaggat 277
              |||| |||||||||||||||||||
Sbjct: 200975 gctgtaccactcccactgaaggat 200998
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 192      aactggacatcttgttcagg 211
                ||||||||||||||||||||
Sbjct: 27661708 aactggacatcttgttcagg 27661689
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>emb|BX820122.1|CNS0AAFP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS76ZC12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2204

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tggacatcttgttcagggcg 214
            ||||||||||||||||||||
Sbjct: 2033 tggacatcttgttcagggcg 2014
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>gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, complete sequence
          Length = 199721

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    tgcaccactcccactgaagg 275
              ||||||||||||||||||||
Sbjct: 182618 tgcaccactcccactgaagg 182637
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>emb|BX510317.5| Zebrafish DNA sequence from clone CH211-229G14 in linkage group 9,
              complete sequence
          Length = 159458

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    agcatatttattggcactga 317
              ||||||||||||||||||||
Sbjct: 115337 agcatatttattggcactga 115318
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 93      atgaaataacagaaaagaaa 112
               ||||||||||||||||||||
Sbjct: 2347553 atgaaataacagaaaagaaa 2347534
to top
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1153E06
          Length = 174588

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   aactggacatcttgttcagg 211
             ||||||||||||||||||||
Sbjct: 10963 aactggacatcttgttcagg 10944
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>dbj|AB117974.1| Homo sapiens ESG mRNA for brain epsilon-sarcoglycan, complete cds
          Length = 1372

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1355 agaaaagaaatgtgatgtaa 1336
to top
>gb|AC158181.2| Selaginella moellendorffii clone JGIASXY-5D1, complete sequence
          Length = 34893

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 422   tcaacagccttgtatgctgcatcaactgggccagttccaa 461
             ||||| ||||||||||||||||| || || || |||||||
Sbjct: 10269 tcaactgccttgtatgctgcatccacaggccccgttccaa 10230
to top
>emb|AJ000534.1|HEEPSSARC Homo sapiens mRNA for epsilon-sarcoglycan
          Length = 1658

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1452 agaaaagaaatgtgatgtaa 1433
to top
>gb|BT024183.1| Zea mays clone EL01N0417B02 mRNA sequence
          Length = 1503

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  caacaaaactggacatcttg 205
            ||||||||||||||||||||
Sbjct: 1274 caacaaaactggacatcttg 1255
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>gb|AC005553.1|AC005553 Homo sapiens chromosome 17, clone hRPK.112_J_9, complete sequence
          Length = 179651

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   cagaaaagaaatgtgatgta 121
             ||||||||||||||||||||
Sbjct: 99017 cagaaaagaaatgtgatgta 99036
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>gb|AC116703.10| Mus musculus chromosome 6, clone RP23-16O17, complete sequence
          Length = 202915

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    tagttggaatctgtattatt 418
              ||||||||||||||||||||
Sbjct: 187021 tagttggaatctgtattatt 187040
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>emb|CT030640.9| Mouse DNA sequence from clone RP24-78F21 on chromosome 9, complete
              sequence
          Length = 225365

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 254    gctgcaccactcccactgaaggat 277
              |||| |||||||||||||||||||
Sbjct: 175748 gctgtaccactcccactgaaggat 175771
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>emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on chromosome 9, complete
              sequence
          Length = 186615

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     taacagaaaagaaatgtgat 118
              ||||||||||||||||||||
Sbjct: 137755 taacagaaaagaaatgtgat 137774



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     taacagaaaagaaatgtgat 118
              ||||||||||||||||||||
Sbjct: 103629 taacagaaaagaaatgtgat 103610
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>gb|AF031920.1|AF031920 Homo sapiens epsilon-sarcoglycan mRNA, partial cds
          Length = 711

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 agaaaagaaatgtgatgtaa 122
           ||||||||||||||||||||
Sbjct: 508 agaaaagaaatgtgatgtaa 489
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>gb|AF036364.1|AF036364 Homo sapiens epsilon-sarcoglycan (ESG) mRNA, complete cds
          Length = 1630

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  agaaaagaaatgtgatgtaa 122
            ||||||||||||||||||||
Sbjct: 1423 agaaaagaaatgtgatgtaa 1404
to top
>gb|AF004166.1|AF004166 Lycopersicon pennellii 2-isopropylmalate synthase (lp-ipmsb) mRNA,
            complete cds
          Length = 2235

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 422  tcaacagccttgtatgctgcatcaactgggccagttccaacagaacaa 469
            ||||| ||||| || || || |||||||| || |||||||||||||||
Sbjct: 1631 tcaactgccttataagccgcgtcaactggccccgttccaacagaacaa 1584


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,577,712
Number of Sequences: 3902068
Number of extensions: 4577712
Number of successful extensions: 89111
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88795
Number of HSP's gapped (non-prelim): 301
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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