>RRPL_DUGBV (Q66431) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 4036

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 448  EKLDQIPDNSDTNSVTAVACETVNASEKAPDSQS*AYSQRRP 323
            +KL+Q PD+S  +  + V+  TV +S+    S S  +   RP
Sbjct: 2798 DKLEQSPDSSGLDDDSVVSTTTVESSDSKGSSSSFTFDLNRP 2839


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,092,554
Number of Sequences: 219361
Number of extensions: 1543049
Number of successful extensions: 3354
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3354
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)