| Clone Name | rbags1i01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2599 Score = 270 bits (136), Expect = 5e-69 Identities = 387/471 (82%), Gaps = 6/471 (1%) Strand = Plus / Minus Query: 208 acggagttaaggtcttgggaaacttggttttgccacctggtaagaaggaacctcgccaga 267 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 2350 acggagttaagatcttgggaaacttggttttgccaccttgtaagaaggaacctcgccaaa 2291 Query: 268 gggcttacagtaggagcagccaatggtggcgtactagcttgtttcttgttgctttcagct 327 |||||||| ||||| |||||||| | || ||| |||| ||||||||| ||| || | Sbjct: 2290 gggcttacggtaggggcagccaaggaaggtgtattagccattttcttgttacttggaggt 2231 Query: 328 tccaaaggaggctcaggtttctttgtaaaaatcgatatcgctgtctcatttagactttgc 387 || | ||||| |||| |||||||| |||| ||| |||| ||||| | ||||||||| Sbjct: 2230 tcagagggaggttcagatttctttgcgaaaactgatgtcgccgtctcttgaagactttgc 2171 Query: 388 aacgaggaatccttcgagctccctagccgatgtagaattctgccaaccaatacctcacag 447 | |||||| ||||||||||||||||||||||| || |||||||||| || |||||||| Sbjct: 2170 agcgaggactccttcgagctccctagccgatggagcattctgccaatcagcacctcacaa 2111 Query: 448 gatccaggtatctcatgttctagatccatcagagaactgaggactgcatgaacaacaggt 507 |||||||||| ||| | ||| |||| ||||| ||| |||| || ||||||||| ||| Sbjct: 2110 gatccaggtagctctttttcgagatgcatcaaggaatcaaggaatgtatgaacaactggt 2051 Query: 508 ccttcatacttgtcgccagtagcctctttcagagaaggaattatcaaggatgagagtgca 567 || | | ||||||| |||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 2050 ccgttaaacttgtcaccagtagcctcttttagagaaggaattatcaatgacgagagtgca 1991 Query: 568 ggtgaagct------gcagaagctcggggagctgattgcccatcagatggctgccgtgat 621 ||||||| | |||||||| | ||||||||||| |||||| | ||| |||| | Sbjct: 1990 ggtgaagatacagaaccagaagcttgaggagctgattgtccatcatgtatctggcgtggt 1931 Query: 622 ttgcgacctttttgcgagtcaacattctcacttcgaacctcatgactgttt 672 ||||||||||||| | |||| ||||||||||| | | |||||||||||| Sbjct: 1930 ttgcgacctttttccatgtcagcattctcacttggggcatcatgactgttt 1880 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 148 gttatgtacactcaaaattaattataca 175 |||||||||||||||||||||||||||| Sbjct: 2419 gttatgtacactcaaaattaattataca 2392
>dbj|AK102538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096J18, full insert sequence Length = 2599 Score = 270 bits (136), Expect = 5e-69 Identities = 387/471 (82%), Gaps = 6/471 (1%) Strand = Plus / Minus Query: 208 acggagttaaggtcttgggaaacttggttttgccacctggtaagaaggaacctcgccaga 267 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 2350 acggagttaagatcttgggaaacttggttttgccaccttgtaagaaggaacctcgccaaa 2291 Query: 268 gggcttacagtaggagcagccaatggtggcgtactagcttgtttcttgttgctttcagct 327 |||||||| ||||| |||||||| | || ||| |||| ||||||||| ||| || | Sbjct: 2290 gggcttacggtaggggcagccaaggaaggtgtattagccattttcttgttacttggaggt 2231 Query: 328 tccaaaggaggctcaggtttctttgtaaaaatcgatatcgctgtctcatttagactttgc 387 || | ||||| |||| |||||||| |||| ||| |||| ||||| | ||||||||| Sbjct: 2230 tcagagggaggttcagatttctttgcgaaaactgatgtcgccgtctcttgaagactttgc 2171 Query: 388 aacgaggaatccttcgagctccctagccgatgtagaattctgccaaccaatacctcacag 447 | |||||| ||||||||||||||||||||||| || |||||||||| || |||||||| Sbjct: 2170 agcgaggactccttcgagctccctagccgatggagcattctgccaatcagcacctcacaa 2111 Query: 448 gatccaggtatctcatgttctagatccatcagagaactgaggactgcatgaacaacaggt 507 |||||||||| ||| | ||| |||| ||||| ||| |||| || ||||||||| ||| Sbjct: 2110 gatccaggtagctctttttcgagatgcatcaaggaatcaaggaatgtatgaacaactggt 2051 Query: 508 ccttcatacttgtcgccagtagcctctttcagagaaggaattatcaaggatgagagtgca 567 || | | ||||||| |||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 2050 ccgttaaacttgtcaccagtagcctcttttagagaaggaattatcaatgacgagagtgca 1991 Query: 568 ggtgaagct------gcagaagctcggggagctgattgcccatcagatggctgccgtgat 621 ||||||| | |||||||| | ||||||||||| |||||| | ||| |||| | Sbjct: 1990 ggtgaagatacagaaccagaagcttgaggagctgattgtccatcatgtatctggcgtggt 1931 Query: 622 ttgcgacctttttgcgagtcaacattctcacttcgaacctcatgactgttt 672 ||||||||||||| | |||| ||||||||||| | | |||||||||||| Sbjct: 1930 ttgcgacctttttccatgtcagcattctcacttggggcatcatgactgttt 1880 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 148 gttatgtacactcaaaattaattataca 175 |||||||||||||||||||||||||||| Sbjct: 2419 gttatgtacactcaaaattaattataca 2392
>gb|AY188756.1| Zea mays GCK-like kinase MIK mRNA, complete cds Length = 2067 Score = 226 bits (114), Expect = 7e-56 Identities = 380/468 (81%), Gaps = 3/468 (0%) Strand = Plus / Minus Query: 204 tcaaacggagttaaggtcttgggaaacttggttttgccacctggtaagaaggaacctcgc 263 |||||| |||||||| ||||| |||||||| ||||||||||| || ||||||||||| || Sbjct: 2067 tcaaacagagttaagatcttgagaaacttgattttgccaccttgtgagaaggaaccttgc 2008 Query: 264 cagagggcttacagtaggagcagccaatggtggcgtactagcttgtttcttgttgctttc 323 ||| ||||| || ||||||||||||||||||||| || ||||| || |||| || | | Sbjct: 2007 cagtgggctcacggtaggagcagccaatggtggcatattagctaacttattgtcgcctgc 1948 Query: 324 agcttccaaaggaggctcaggtttctttgtaaaaatcgatatcgctgtctcatttagact 383 ||| | ||||| ||||||| ||| || ||||| || ||||| ||||| | |||| Sbjct: 1947 tttttcagagggaggttcaggttccttagtgaaaattgacatcgccgtctcctgaagacc 1888 Query: 384 ttgcaacgaggaatccttcgagctccctagccgatgtagaattctgccaaccaatacctc 443 |||||| ||||||||||| |||||||||||||| ||||| | ||||||||||| ||| || Sbjct: 1887 ttgcaatgaggaatcctttgagctccctagccggtgtagcaatctgccaaccagtacttc 1828 Query: 444 acaggatccaggtatctcatgttctagatccatcagagaactgaggactgcatgaacaac 503 || ||||||||||| ||| |||||| |||||||| ||| |||| ||||||||| | Sbjct: 1827 gcatgatccaggtatatcacgttctaaatccatcaaggaatcaaggaaggcatgaacagc 1768 Query: 504 aggtccttcatacttgtcgccagtagcctctttcagagaaggaattatcaaggatgagag 563 ||| | ||| ||||||| ||||||||||||||||| ||||| | || ||| ||||||| Sbjct: 1767 aggccgatcaaacttgtcaccagtagcctctttcagggaagggagtagcaatgatgagac 1708 Query: 564 tgcaggtgaagctgcaga---agctcggggagctgattgcccatcagatggctgccgtga 620 ||||||||||||| |||| ||| || | ||||| |||||||||| | |||||| | Sbjct: 1707 tgcaggtgaagctacagaactagcacgagaggctgactgcccatcaggtaattgccgtaa 1648 Query: 621 tttgcgacctttttgcgagtcaacattctcacttcgaacctcatgact 668 |||| ||||||| |||| ||| |||| ||||||| ||||||| ||||| Sbjct: 1647 tttgtgacctttctgcgtgtccacatcctcactttgaacctcttgact 1600
>ref|XM_478314.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2458 Score = 210 bits (106), Expect = 4e-51 Identities = 354/437 (81%), Gaps = 6/437 (1%) Strand = Plus / Minus Query: 242 acctggtaagaaggaacctcgccagagggcttacagtaggagcagccaatggtggcgtac 301 |||| ||||||||||||||||||| ||||||||| ||||| |||||||| | || ||| Sbjct: 2266 accttgtaagaaggaacctcgccaaagggcttacggtaggggcagccaaggaaggtgtat 2207 Query: 302 tagcttgtttcttgttgctttcagcttccaaaggaggctcaggtttctttgtaaaaatcg 361 |||| ||||||||| ||| || ||| | ||||| |||| |||||||| |||| | Sbjct: 2206 tagccattttcttgttacttggaggttcagagggaggttcagatttctttgcgaaaactg 2147 Query: 362 atatcgctgtctcatttagactttgcaacgaggaatccttcgagctccctagccgatgta 421 || |||| ||||| | |||||||||| |||||| ||||||||||||||||||||||| | Sbjct: 2146 atgtcgccgtctcttgaagactttgcagcgaggactccttcgagctccctagccgatgga 2087 Query: 422 gaattctgccaaccaatacctcacaggatccaggtatctcatgttctagatccatcagag 481 | |||||||||| || |||||||| |||||||||| ||| | ||| |||| ||||| | Sbjct: 2086 gcattctgccaatcagcacctcacaagatccaggtagctctttttcgagatgcatcaagg 2027 Query: 482 aactgaggactgcatgaacaacaggtccttcatacttgtcgccagtagcctctttcagag 541 || |||| || ||||||||| ||||| | | ||||||| |||||||||||||| |||| Sbjct: 2026 aatcaaggaatgtatgaacaactggtccgttaaacttgtcaccagtagcctcttttagag 1967 Query: 542 aaggaattatcaaggatgagagtgcaggtgaagct------gcagaagctcggggagctg 595 ||||||||||||| || |||||||||||||||| | |||||||| | ||||||| Sbjct: 1966 aaggaattatcaatgacgagagtgcaggtgaagatacagaaccagaagcttgaggagctg 1907 Query: 596 attgcccatcagatggctgccgtgatttgcgacctttttgcgagtcaacattctcacttc 655 |||| |||||| | ||| |||| |||||||||||||| | |||| ||||||||||| Sbjct: 1906 attgtccatcatgtatctggcgtggtttgcgacctttttccatgtcagcattctcacttg 1847 Query: 656 gaacctcatgactgttt 672 | | |||||||||||| Sbjct: 1846 gggcatcatgactgttt 1830 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 208 acggagttaaggtcttgggaaacttggttttgccacctg 246 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 2378 acggagttaagatcttgggaaacttggttttgccacctg 2340 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 148 gttatgtacactcaaaattaattataca 175 |||||||||||||||||||||||||||| Sbjct: 2447 gttatgtacactcaaaattaattataca 2420
>dbj|AK106514.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A09, full insert sequence Length = 2457 Score = 210 bits (106), Expect = 4e-51 Identities = 354/437 (81%), Gaps = 6/437 (1%) Strand = Plus / Minus Query: 242 acctggtaagaaggaacctcgccagagggcttacagtaggagcagccaatggtggcgtac 301 |||| ||||||||||||||||||| ||||||||| ||||| |||||||| | || ||| Sbjct: 2265 accttgtaagaaggaacctcgccaaagggcttacggtaggggcagccaaggaaggtgtat 2206 Query: 302 tagcttgtttcttgttgctttcagcttccaaaggaggctcaggtttctttgtaaaaatcg 361 |||| ||||||||| ||| || ||| | ||||| |||| |||||||| |||| | Sbjct: 2205 tagccattttcttgttacttggaggttcagagggaggttcagatttctttgcgaaaactg 2146 Query: 362 atatcgctgtctcatttagactttgcaacgaggaatccttcgagctccctagccgatgta 421 || |||| ||||| | |||||||||| |||||| ||||||||||||||||||||||| | Sbjct: 2145 atgtcgccgtctcttgaagactttgcagcgaggactccttcgagctccctagccgatgga 2086 Query: 422 gaattctgccaaccaatacctcacaggatccaggtatctcatgttctagatccatcagag 481 | |||||||||| || |||||||| |||||||||| ||| | ||| |||| ||||| | Sbjct: 2085 gcattctgccaatcagcacctcacaagatccaggtagctctttttcgagatgcatcaagg 2026 Query: 482 aactgaggactgcatgaacaacaggtccttcatacttgtcgccagtagcctctttcagag 541 || |||| || ||||||||| ||||| | | ||||||| |||||||||||||| |||| Sbjct: 2025 aatcaaggaatgtatgaacaactggtccgttaaacttgtcaccagtagcctcttttagag 1966 Query: 542 aaggaattatcaaggatgagagtgcaggtgaagct------gcagaagctcggggagctg 595 ||||||||||||| || |||||||||||||||| | |||||||| | ||||||| Sbjct: 1965 aaggaattatcaatgacgagagtgcaggtgaagatacagaaccagaagcttgaggagctg 1906 Query: 596 attgcccatcagatggctgccgtgatttgcgacctttttgcgagtcaacattctcacttc 655 |||| |||||| | ||| |||| |||||||||||||| | |||| ||||||||||| Sbjct: 1905 attgtccatcatgtacctggcgtggtttgcgacctttttccatgtcagcattctcacttg 1846 Query: 656 gaacctcatgactgttt 672 | | |||||||||||| Sbjct: 1845 gggcatcatgactgttt 1829 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 208 acggagttaaggtcttgggaaacttggttttgccacctg 246 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 2377 acggagttaagatcttgggaaacttggttttgccacctg 2339 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 148 gttatgtacactcaaaattaattataca 175 |||||||||||||||||||||||||||| Sbjct: 2446 gttatgtacactcaaaattaattataca 2419
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 75.8 bits (38), Expect = 2e-10 Identities = 134/166 (80%) Strand = Plus / Plus Query: 242 acctggtaagaaggaacctcgccagagggcttacagtaggagcagccaatggtggcgtac 301 |||| ||||||||||||||||||| ||||||||| ||||| |||||||| | || ||| Sbjct: 19205523 accttgtaagaaggaacctcgccaaagggcttacggtaggggcagccaaggaaggtgtat 19205582 Query: 302 tagcttgtttcttgttgctttcagcttccaaaggaggctcaggtttctttgtaaaaatcg 361 |||| ||||||||| ||| || ||| | ||||| |||| |||||||| |||| | Sbjct: 19205583 tagccattttcttgttacttggaggttcagagggaggttcagatttctttgcgaaaactg 19205642 Query: 362 atatcgctgtctcatttagactttgcaacgaggaatccttcgagct 407 || |||| ||||| | |||||||||| |||||| ||||||||||| Sbjct: 19205643 atgtcgccgtctcttgaagactttgcagcgaggactccttcgagct 19205688 Score = 69.9 bits (35), Expect = 1e-08 Identities = 106/130 (81%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 530 cctctttcagagaaggaattatcaaggatgagagtgcaggtgaagct------gcagaag 583 ||||||| ||||||||||||||||| || |||||||||||||||| | |||||| Sbjct: 19206427 cctcttttagagaaggaattatcaatgacgagagtgcaggtgaagatacagaaccagaag 19206486 Query: 584 ctcggggagctgattgcccatcagatggctgccgtgatttgcgacctttttgcgagtcaa 643 || | ||||||||||| |||||| | ||| |||| |||||||||||||| | |||| Sbjct: 19206487 cttgaggagctgattgtccatcatgtatctggcgtggtttgcgacctttttccatgtcag 19206546 Query: 644 cattctcact 653 |||||||||| Sbjct: 19206547 cattctcact 19206556 Score = 69.9 bits (35), Expect = 1e-08 Identities = 104/127 (81%) Strand = Plus / Plus Query: 406 ctccctagccgatgtagaattctgccaaccaatacctcacaggatccaggtatctcatgt 465 |||||||||||||| || |||||||||| || |||||||| |||||||||| ||| | | Sbjct: 19205807 ctccctagccgatggagcattctgccaatcagcacctcacaagatccaggtagctctttt 19205866 Query: 466 tctagatccatcagagaactgaggactgcatgaacaacaggtccttcatacttgtcgcca 525 || |||| ||||| ||| |||| || ||||||||| ||||| | | ||||||| ||| Sbjct: 19205867 tcgagatgcatcaaggaatcaaggaatgtatgaacaactggtccgttaaacttgtcacca 19205926 Query: 526 gtagcct 532 ||||||| Sbjct: 19205927 gtagcct 19205933 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 208 acggagttaaggtcttgggaaacttggttttgccacctg 246 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 19205411 acggagttaagatcttgggaaacttggttttgccacctg 19205449 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 148 gttatgtacactcaaaattaattataca 175 |||||||||||||||||||||||||||| Sbjct: 19205342 gttatgtacactcaaaattaattataca 19205369
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 75.8 bits (38), Expect = 2e-10 Identities = 134/166 (80%) Strand = Plus / Plus Query: 242 acctggtaagaaggaacctcgccagagggcttacagtaggagcagccaatggtggcgtac 301 |||| ||||||||||||||||||| ||||||||| ||||| |||||||| | || ||| Sbjct: 128918 accttgtaagaaggaacctcgccaaagggcttacggtaggggcagccaaggaaggtgtat 128977 Query: 302 tagcttgtttcttgttgctttcagcttccaaaggaggctcaggtttctttgtaaaaatcg 361 |||| ||||||||| ||| || ||| | ||||| |||| |||||||| |||| | Sbjct: 128978 tagccattttcttgttacttggaggttcagagggaggttcagatttctttgcgaaaactg 129037 Query: 362 atatcgctgtctcatttagactttgcaacgaggaatccttcgagct 407 || |||| ||||| | |||||||||| |||||| ||||||||||| Sbjct: 129038 atgtcgccgtctcttgaagactttgcagcgaggactccttcgagct 129083 Score = 69.9 bits (35), Expect = 1e-08 Identities = 106/130 (81%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 530 cctctttcagagaaggaattatcaaggatgagagtgcaggtgaagct------gcagaag 583 ||||||| ||||||||||||||||| || |||||||||||||||| | |||||| Sbjct: 129822 cctcttttagagaaggaattatcaatgacgagagtgcaggtgaagatacagaaccagaag 129881 Query: 584 ctcggggagctgattgcccatcagatggctgccgtgatttgcgacctttttgcgagtcaa 643 || | ||||||||||| |||||| | ||| |||| |||||||||||||| | |||| Sbjct: 129882 cttgaggagctgattgtccatcatgtatctggcgtggtttgcgacctttttccatgtcag 129941 Query: 644 cattctcact 653 |||||||||| Sbjct: 129942 cattctcact 129951 Score = 69.9 bits (35), Expect = 1e-08 Identities = 104/127 (81%) Strand = Plus / Plus Query: 406 ctccctagccgatgtagaattctgccaaccaatacctcacaggatccaggtatctcatgt 465 |||||||||||||| || |||||||||| || |||||||| |||||||||| ||| | | Sbjct: 129202 ctccctagccgatggagcattctgccaatcagcacctcacaagatccaggtagctctttt 129261 Query: 466 tctagatccatcagagaactgaggactgcatgaacaacaggtccttcatacttgtcgcca 525 || |||| ||||| ||| |||| || ||||||||| ||||| | | ||||||| ||| Sbjct: 129262 tcgagatgcatcaaggaatcaaggaatgtatgaacaactggtccgttaaacttgtcacca 129321 Query: 526 gtagcct 532 ||||||| Sbjct: 129322 gtagcct 129328 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 208 acggagttaaggtcttgggaaacttggttttgccacctg 246 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 128806 acggagttaagatcttgggaaacttggttttgccacctg 128844 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 148 gttatgtacactcaaaattaattataca 175 |||||||||||||||||||||||||||| Sbjct: 128737 gttatgtacactcaaaattaattataca 128764
>gb|AC069381.8| Homo sapiens chromosome 15, clone RP11-604N3, complete sequence Length = 191659 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 465 ttctagatccatcagagaactgag 488 |||||||||||||||||||||||| Sbjct: 24937 ttctagatccatcagagaactgag 24914
>emb|AL139395.7| Human DNA sequence from clone RP11-130N24 on chromosome Xq13.3-21.2 Contains the 3' end of gene KIAA2022, complete sequence Length = 146610 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 44 ttacattagaaaatgggcaggaa 66 ||||||||||||||||||||||| Sbjct: 110129 ttacattagaaaatgggcaggaa 110151
>gb|AC093086.4| Homo sapiens BAC clone RP11-746B14 from 7, complete sequence Length = 64601 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 tagatccatcagagaactgagg 489 |||||||||||||||||||||| Sbjct: 44737 tagatccatcagagaactgagg 44758
>ref|XM_846207.1| PREDICTED: Canis familiaris similar to protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform (calcineurin A gamma) (LOC609027), mRNA Length = 2512 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 aatatgttctagtaaaacaaaa 87 |||||||||||||||||||||| Sbjct: 2348 aatatgttctagtaaaacaaaa 2369
>emb|AL162393.15| Human DNA sequence from clone RP11-534I8 on chromosome 9 Contains a programmed cell death 2 (PDCD2) pseudogene, the 5' end of the gene for a novel C2H2 type zinc finger protein and two CpG islands, complete sequence Length = 184302 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 tagatccatcagagaactgagg 489 |||||||||||||||||||||| Sbjct: 108342 tagatccatcagagaactgagg 108321
>emb|AL159161.11| Human DNA sequence from clone RP11-95N14 on chromosome 13 Contains the 5' end of the gene similar to G protein coupled receptor affecting testicular descent (H. sapiens)(GREAT), complete sequence Length = 90724 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 tagatccatcagagaactgagg 489 |||||||||||||||||||||| Sbjct: 46780 tagatccatcagagaactgagg 46759
>gb|AC024649.10| Homo sapiens chromosome 8, clone RP11-618N15, complete sequence Length = 148282 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 gccagagggcttacagtaggag 283 |||||||||||||||||||||| Sbjct: 18506 gccagagggcttacagtaggag 18485
>gb|AC004655.1| Homo sapiens Xp22-140-141 BAC GSHB-128G5 (Genome Systems Human BAC library) complete sequence Length = 134929 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 tagatccatcagagaactgagg 489 |||||||||||||||||||||| Sbjct: 4096 tagatccatcagagaactgagg 4117
>gb|AC079168.22| Homo sapiens Xp BAC RP11-753E22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151012 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 tagatccatcagagaactgagg 489 |||||||||||||||||||||| Sbjct: 84868 tagatccatcagagaactgagg 84847
>gb|AC131904.4| Homo sapiens chromosome 8, clone CTD-2328O16, complete sequence Length = 116803 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 gccagagggcttacagtaggag 283 |||||||||||||||||||||| Sbjct: 79611 gccagagggcttacagtaggag 79590
>dbj|AP000553.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region, clone:KB1440D3 Length = 164946 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 tagatccatcagagaactgagg 489 |||||||||||||||||||||| Sbjct: 151627 tagatccatcagagaactgagg 151648
>emb|CR384088.10| Zebrafish DNA sequence from clone CH211-107K4 in linkage group 15, complete sequence Length = 156313 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 58520 taaaccaaaacaaacggatggcagc 58496
>emb|BX957306.12| Zebrafish DNA sequence from clone DKEY-119H24 in linkage group 1, complete sequence Length = 224487 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 153618 taaaccaaaacaaacggatggcagc 153642
>emb|CR847897.15| Zebrafish DNA sequence from clone DKEY-90L8 in linkage group 8, complete sequence Length = 164571 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 109218 taaaccaaaacaaacggatggcagc 109194
>emb|CR383666.7| Zebrafish DNA sequence from clone DKEY-30H2 in linkage group 2, complete sequence Length = 144370 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 41456 taaaccaaaacaaacggatggcagc 41480
>emb|CR391991.7| Zebrafish DNA sequence from clone DKEY-150E11 in linkage group 2, complete sequence Length = 188653 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 132314 taaaccaaaacaaacggatggcagc 132338
>emb|X52765.1|CHHVTRNK Barley plastid DNA with trnK(UUU), rps16, trnQ(UUG), psbK, psbI and trnS(GCU) genes Length = 6245 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 tttctttgtaaaaatcgatat 365 ||||||||||||||||||||| Sbjct: 5674 tttctttgtaaaaatcgatat 5694
>emb|CR381684.9| Zebrafish DNA sequence from clone CH211-28P3 in linkage group 23, complete sequence Length = 184232 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 112341 taaaccaaaacaaacggatggcagc 112365
>emb|BX119903.13| Zebrafish DNA sequence from clone CH211-188I6 in linkage group 17, complete sequence Length = 138645 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 16249 taaaccaaaacaaacggatggcagc 16225
>emb|CR384103.7| Zebrafish DNA sequence from clone DKEY-215K6 in linkage group 5, complete sequence Length = 142808 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 110007 taaaccaaaacaaacggatggcagc 110031
>emb|BX546478.12| Zebrafish DNA sequence from clone DKEYP-115B3 in linkage group 17, complete sequence Length = 131670 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 45360 taaaccaaaacaaacggatggcagc 45384
>emb|BX088705.18| Zebrafish DNA sequence from clone DKEY-21G19, complete sequence Length = 204103 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 43303 taaaccaaaacaaacggatggcagc 43279
>dbj|AK126194.1| Homo sapiens cDNA FLJ44206 fis, clone THYMU3001472 Length = 4401 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaacaaaacaaacggatggc 99 ||||||||||||||||||||| Sbjct: 892 aaaacaaaacaaacggatggc 872
>gb|AC087057.5| Homo sapiens BAC clone RP11-492K24 from 2, complete sequence Length = 64674 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 tagcagttacattagaaaatgggca 62 |||| |||||||||||||||||||| Sbjct: 38403 tagctgttacattagaaaatgggca 38427
>gb|AC022817.8| Homo sapiens chromosome 15, clone RP11-18A7, complete sequence Length = 173073 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 619 gatttgcgacctttttgcgagtcaacattctca 651 |||||| ||||| |||| ||||||||||||||| Sbjct: 112027 gatttgagacctctttgagagtcaacattctca 111995
>emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in linkage group 19, complete sequence Length = 179116 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 114194 taaaccaaaacaaacggatggcagc 114218
>emb|BX927276.23| Zebrafish DNA sequence from clone CH211-124A3 in linkage group 22, complete sequence Length = 166844 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 132294 taaaccaaaacaaacggatggcagc 132318
>emb|AL591593.11| Zebrafish DNA sequence from clone BUSM1-211O13, complete sequence Length = 121251 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 40934 taaaccaaaacaaacggatggcagc 40958
>emb|BX510336.6| Zebrafish DNA sequence from clone CH211-198D13 in linkage group 20, complete sequence Length = 187683 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 101141 taaaccaaaacaaacggatggcagc 101165
>dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, section 72/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaacaaaacaaacggatggc 99 ||||||||||||||||||||| Sbjct: 79417 aaaacaaaacaaacggatggc 79397
>dbj|AP001432.2| Homo sapiens genomic DNA, chromosome 21q, clone:CMP21-T1601, complete sequence Length = 102247 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaacaaaacaaacggatggc 99 ||||||||||||||||||||| Sbjct: 46812 aaaacaaaacaaacggatggc 46792
>emb|AL840627.7| Zebrafish DNA sequence from clone CH211-278B16 in linkage group 17, complete sequence Length = 164375 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 taaaacaaaacaaacggatggcagc 102 |||| |||||||||||||||||||| Sbjct: 24205 taaaccaaaacaaacggatggcagc 24181
>emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chromosome X, complete sequence Length = 231530 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 cacctggtaagaaggaacctc 261 ||||||||||||||||||||| Sbjct: 148862 cacctggtaagaaggaacctc 148842
>dbj|AP000151.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 3/16, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaacaaaacaaacggatggc 99 ||||||||||||||||||||| Sbjct: 48834 aaaacaaaacaaacggatggc 48814
>dbj|AP000009.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 2/13 Length = 152345 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaacaaaacaaacggatggc 99 ||||||||||||||||||||| Sbjct: 148834 aaaacaaaacaaacggatggc 148814
>ref|NM_003640.2| Homo sapiens inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein (IKBKAP), mRNA Length = 5917 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 aaaacatggaagaattttcaatca 206 |||||||||||||||||| ||||| Sbjct: 5246 aaaacatggaagaatttttaatca 5223
>gb|AC131129.4| Rattus norvegicus 17 BAC CH230-15O20 (Children's Hospital Oakland Research Institute) complete sequence Length = 232401 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 gcagaagctcggggagctga 596 |||||||||||||||||||| Sbjct: 123470 gcagaagctcggggagctga 123451
>gb|AC149756.4| Bos taurus BAC CH240-361I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 182955 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 agcctctttcagagaaggaa 547 |||||||||||||||||||| Sbjct: 157360 agcctctttcagagaaggaa 157379
>emb|CT025604.10| Mouse DNA sequence from clone RP23-332P8 on chromosome 13, complete sequence Length = 200591 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 gcagaagctcggggagctga 596 |||||||||||||||||||| Sbjct: 148682 gcagaagctcggggagctga 148663
>emb|CR962136.2| Medicago truncatula chromosome 5 clone mth2-52n22, COMPLETE SEQUENCE Length = 87738 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 aggatgagagtgcaggtgaa 573 |||||||||||||||||||| Sbjct: 65760 aggatgagagtgcaggtgaa 65779
>gb|AC124546.4| Mus musculus BAC clone RP23-273G17 from chromosome 12, complete sequence Length = 214438 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 atatgttctagtaaaacaaaacaa 90 ||||||||||||||| |||||||| Sbjct: 180275 atatgttctagtaaatcaaaacaa 180252
>gb|AC115300.4| Mus musculus BAC clone RP24-74P1 from chromosome 10, complete sequence Length = 199750 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 actcaaaattaattatacac 176 |||||||||||||||||||| Sbjct: 158254 actcaaaattaattatacac 158273
>gb|AC115804.7| Mus musculus chromosome 14, clone RP23-411N8, complete sequence Length = 220114 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 561 gagtgcaggtgaagctgcagaagc 584 ||||||||||||| |||||||||| Sbjct: 210270 gagtgcaggtgaaactgcagaagc 210293
>gb|BC050676.1| Homo sapiens hypothetical protein MGC5242, mRNA (cDNA clone IMAGE:6043548), partial cds Length = 2586 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gatccatcagagaactgagg 489 |||||||||||||||||||| Sbjct: 654 gatccatcagagaactgagg 635
>gb|AC102248.19| Mus musculus chromosome 18, clone RP24-158I9, complete sequence Length = 206000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 aatcaaaacatggaagaatt 198 |||||||||||||||||||| Sbjct: 97583 aatcaaaacatggaagaatt 97564
>emb|BX546457.1| Human DNA sequence from clone RP11-29O12 on chromosome 1 Contains part of a novel gene (FLJ31487), complete sequence Length = 69971 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 tagatccatcagagaactgaggac 491 |||||||||||||||| ||||||| Sbjct: 44869 tagatccatcagagaattgaggac 44892
>gb|BC010361.1| Homo sapiens transmembrane protein 140, mRNA (cDNA clone IMAGE:4334393), partial cds Length = 1436 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gatccatcagagaactgagg 489 |||||||||||||||||||| Sbjct: 488 gatccatcagagaactgagg 469
>gb|BC024018.1| Homo sapiens transmembrane protein 140, mRNA (cDNA clone IMAGE:4254214), partial cds Length = 1435 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gatccatcagagaactgagg 489 |||||||||||||||||||| Sbjct: 488 gatccatcagagaactgagg 469
>emb|AL441986.19| Human DNA sequence from clone RP11-349O10 on chromosome 13 Contains two novel genes and a peroxiredoxin 3 (PRDX3) pseudogene, complete sequence Length = 188208 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gatccatcagagaactgagg 489 |||||||||||||||||||| Sbjct: 46608 gatccatcagagaactgagg 46589
>emb|AL445469.4| Human DNA sequence from clone RP11-254N18 on chromosome 1 Contains part of the ACBD6 gene for acyl-Coenzyme A binding domain containing 6 and a voltage-dependent anion channel 1 (VDAC1) pseudogene, complete sequence Length = 129504 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 tgttctagatccatcagaga 482 |||||||||||||||||||| Sbjct: 101895 tgttctagatccatcagaga 101876
>emb|AL359692.9| Human DNA sequence from clone RP11-3J11 on chromosome 9 Contains the ACTL7A and ACTL7B genes for Actin-like 7A and 7B, the 3' end of the IKBKAP gene encoding an inhibitor of kappa light polypeptide gene enhancer in B-cells (kinase complex-associated protein (IKAP)), an ATP synthase F chain (mitochondrial) pseudogene, a novel gene, and a CpG island, complete sequence Length = 78376 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 aaaacatggaagaattttcaatca 206 |||||||||||||||||| ||||| Sbjct: 40006 aaaacatggaagaatttttaatca 40029
>emb|AL353788.33| Human DNA sequence from clone RP11-112K13 on chromosome Xq26.1-26.3, complete sequence Length = 162739 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ctttcagcttccaaaggagg 338 |||||||||||||||||||| Sbjct: 118760 ctttcagcttccaaaggagg 118779
>emb|AL161423.9| Human DNA sequence from clone RP11-168J5 on chromosome 13 Contains a CpG island, complete sequence Length = 164786 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gccagtagcctctttcagag 541 |||||||||||||||||||| Sbjct: 153399 gccagtagcctctttcagag 153380
>emb|AL139002.18| Human DNA sequence from clone RP11-318G21 on chromosome 13q22.2-31.1 Contains the EDNRB gene for endothelin receptor type B, three novel genes and a CpG island, complete sequence Length = 183337 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 aaacatggaagaattttcaatcaa 207 |||||||||||||||||| ||||| Sbjct: 163935 aaacatggaagaattttccatcaa 163912
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 tgcagaagctcggggagctg 595 |||||||||||||||||||| Sbjct: 2520063 tgcagaagctcggggagctg 2520082
>gb|BC033094.1| Homo sapiens inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein, mRNA (cDNA clone MGC:45667 IMAGE:4562340), complete cds Length = 5047 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 aaaacatggaagaattttcaatca 206 |||||||||||||||||| ||||| Sbjct: 5024 aaaacatggaagaatttttaatca 5001
>emb|BX648204.1|HSM808352 Homo sapiens genomic DNA; cDNA DKFZp686I03249 (from clone DKFZp686I03249) Length = 3926 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 aaaacatggaagaattttcaatca 206 |||||||||||||||||| ||||| Sbjct: 2679 aaaacatggaagaatttttaatca 2656
>emb|CR931742.1| Medicago truncatula chromosome 5 clone mth2-28i20, COMPLETE SEQUENCE Length = 115743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 aggatgagagtgcaggtgaa 573 |||||||||||||||||||| Sbjct: 30289 aggatgagagtgcaggtgaa 30308
>dbj|AK090854.1| Homo sapiens cDNA FLJ33535 fis, clone BRAMY2007458 Length = 2615 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 aaacatggaagaattttcaatcaa 207 |||||||||||||||||| ||||| Sbjct: 327 aaacatggaagaattttccatcaa 350
>dbj|AK024223.1| Homo sapiens cDNA FLJ14161 fis, clone NT2RM2001803, highly similar to Homo sapiens IkappaB kinase complex associated protein (IKAP) mRNA Length = 2712 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 aaaacatggaagaattttcaatca 206 |||||||||||||||||| ||||| Sbjct: 2705 aaaacatggaagaatttttaatca 2682
>dbj|AB183488.1| Oryzias latipes DNA, MHC class I region Length = 540982 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 agcacaagccgccaagaaca 119 |||||||||||||||||||| Sbjct: 137847 agcacaagccgccaagaaca 137828
>gb|AC021039.12| Homo sapiens chromosome 10 clone RP11-478K18, complete sequence Length = 139537 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tagatccatcagagaactga 487 |||||||||||||||||||| Sbjct: 28711 tagatccatcagagaactga 28692
>gb|AC008533.9| Homo sapiens chromosome 5 clone CTC-483L24, complete sequence Length = 254730 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 ttgcccatcagatggctgcc 616 |||||||||||||||||||| Sbjct: 173797 ttgcccatcagatggctgcc 173778
>gb|AC010202.6| Homo sapiens 12q BAC RP11-210L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170004 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tctagtaaaacaaaacaaac 92 |||||||||||||||||||| Sbjct: 47713 tctagtaaaacaaaacaaac 47694
>ref|XM_935715.1| PREDICTED: Homo sapiens similar to hypothetical protein FLJ11000 (LOC653851), mRNA Length = 2369 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gatccatcagagaactgagg 489 |||||||||||||||||||| Sbjct: 1469 gatccatcagagaactgagg 1450
>ref|XM_940965.1| PREDICTED: Homo sapiens similar to hypothetical protein FLJ11000 (LOC654018), mRNA Length = 2369 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gatccatcagagaactgagg 489 |||||||||||||||||||| Sbjct: 1469 gatccatcagagaactgagg 1450
>ref|XM_930550.1| PREDICTED: Homo sapiens similar to hypothetical protein FLJ11000 (LOC653739), mRNA Length = 2369 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gatccatcagagaactgagg 489 |||||||||||||||||||| Sbjct: 1469 gatccatcagagaactgagg 1450
>gb|AC040172.5| Homo sapiens chromosome 16 clone RP11-60I4, complete sequence Length = 145003 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ttcttctaaagagttatgta 155 |||||||||||||||||||| Sbjct: 142219 ttcttctaaagagttatgta 142238
>dbj|AK080967.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430303F05 product:similar to DJ835G14.1 (RETINOBLASTOMA-BINDING PROTEIN 1) (FRAGMENT) [Homo sapiens], full insert sequence Length = 4123 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 gcagaagctcggggagctga 596 |||||||||||||||||||| Sbjct: 2476 gcagaagctcggggagctga 2457
>emb|BX005024.13| Zebrafish DNA sequence from clone DKEY-211F1, complete sequence Length = 171527 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 aaaacaaaacaaacggatggcagc 102 ||||||||||||| |||||||||| Sbjct: 30970 aaaacaaaacaaatggatggcagc 30993
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 aaatatgttctagtaaaaca 84 |||||||||||||||||||| Sbjct: 13543372 aaatatgttctagtaaaaca 13543353
>gb|AC090497.2|AC090497 Homo sapiens chromosome 7 clone RP11-643E1, complete sequence Length = 169199 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 gatccatcagagaactgagg 489 |||||||||||||||||||| Sbjct: 131024 gatccatcagagaactgagg 131043
>gb|AF289262.1|AF289262 Porcine adenovirus 5, complete genome Length = 32621 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 ctagcttgtttcttgttgctttca 324 |||||| ||||||||||||||||| Sbjct: 20952 ctagctcgtttcttgttgctttca 20975
>gb|AC009147.9| Homo sapiens chromosome 16 clone RP11-55H18, complete sequence Length = 163719 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ttcttctaaagagttatgta 155 |||||||||||||||||||| Sbjct: 27887 ttcttctaaagagttatgta 27868
>dbj|AB210033.1| Homo sapiens mRNA for IKBKAP variant protein, partial cds, clone: hj01659 Length = 5224 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 aaaacatggaagaattttcaatca 206 |||||||||||||||||| ||||| Sbjct: 5224 aaaacatggaagaatttttaatca 5201
>gb|AC096653.1| Homo sapiens BAC clone RP11-16P17 from 4, complete sequence Length = 113404 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ttctagtaaaacaaaacaaa 91 |||||||||||||||||||| Sbjct: 66948 ttctagtaaaacaaaacaaa 66929
>dbj|BA000027.2| Oryzias latipes DNA, MHC Class I Region Length = 425935 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 agcacaagccgccaagaaca 119 |||||||||||||||||||| Sbjct: 115194 agcacaagccgccaagaaca 115175
>gb|AC153497.8| Mus musculus 10 BAC RP23-226H21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179741 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aaaacaaaacaaacggatgg 98 |||||||||||||||||||| Sbjct: 151806 aaaacaaaacaaacggatgg 151825
>gb|AC156942.2| Pan troglodytes BAC clone CH251-541P6 from chromosome unknown, complete sequence Length = 164196 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 ttgcccatcagatggctgcc 616 |||||||||||||||||||| Sbjct: 61735 ttgcccatcagatggctgcc 61754
>gb|AC154615.2| Mus musculus BAC clone RP23-257K8 from chromosome 13, complete sequence Length = 183054 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 gcagaagctcggggagctga 596 |||||||||||||||||||| Sbjct: 111719 gcagaagctcggggagctga 111700
>gb|AC126943.5| Mus musculus BAC clone RP23-307F3 from chromosome 10, complete sequence Length = 192356 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aaaacaaaacaaacggatgg 98 |||||||||||||||||||| Sbjct: 11309 aaaacaaaacaaacggatgg 11328
>gb|AC092121.3| Homo sapiens chromosome 16 clone RP11-102D18, complete sequence Length = 150955 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ttcttctaaagagttatgta 155 |||||||||||||||||||| Sbjct: 146375 ttcttctaaagagttatgta 146356
>gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168134 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 tctagtaaaacaaaacaaac 92 |||||||||||||||||||| Sbjct: 36560 tctagtaaaacaaaacaaac 36579
>gb|AC083862.2|AC083862 Homo sapiens chromosome 7 clone RP11-134L10, complete sequence Length = 162931 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 gatccatcagagaactgagg 489 |||||||||||||||||||| Sbjct: 68958 gatccatcagagaactgagg 68977
>gb|DQ347962.1| Picrorhiza kurrooa 3-hydroxy-3-methylglutaryl-CoA reductase mRNA, complete cds Length = 2245 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 taagaaggaacctcgccaga 267 |||||||||||||||||||| Sbjct: 591 taagaaggaacctcgccaga 572
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 attagaaaatgggcaggaaa 67 |||||||||||||||||||| Sbjct: 1510092 attagaaaatgggcaggaaa 1510111
>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0459H02 Length = 168230 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 aaatatgttctagtaaaaca 84 |||||||||||||||||||| Sbjct: 71862 aaatatgttctagtaaaaca 71843
>gb|BC058254.1| Mus musculus phosphorylase kinase alpha 2, mRNA (cDNA clone IMAGE:6465984), complete cds Length = 2323 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tcaaaacatggaagaatttt 200 |||||||||||||||||||| Sbjct: 2162 tcaaaacatggaagaatttt 2181
>gb|AC154511.2| Mus musculus BAC clone RP24-69N19 from 13, complete sequence Length = 197061 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 gcagaagctcggggagctga 596 |||||||||||||||||||| Sbjct: 9697 gcagaagctcggggagctga 9678
>emb|CR936413.5| Zebrafish DNA sequence from clone CH73-108E16 in linkage group 22, complete sequence Length = 35390 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 taaaacaaaacaaacggatggcag 101 |||| ||||||||||||||||||| Sbjct: 7181 taaaccaaaacaaacggatggcag 7204
>emb|AL772209.5| Zebrafish DNA sequence from clone DKEY-49F1 in linkage group 17, complete sequence Length = 202805 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 aaaacaaaacaaacggatggcagc 102 |||| ||||||||||||||||||| Sbjct: 2416 aaaataaaacaaacggatggcagc 2439
>emb|AL117202.1|CEY47D3A Caenorhabditis elegans YAC Y47D3A, complete sequence Length = 199814 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 tttctttgtaaaaatcgata 364 |||||||||||||||||||| Sbjct: 143939 tttctttgtaaaaatcgata 143958
>gb|AC007228.1|AC007228 Homo sapiens chromosome 19, BAC 37295 (CIT-B-21A4), complete sequence Length = 130067 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tagatccatcagagaactga 487 |||||||||||||||||||| Sbjct: 18844 tagatccatcagagaactga 18825
>emb|CT573035.8| Mouse DNA sequence from clone RP23-331B8 on chromosome 14, complete sequence Length = 115207 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 561 gagtgcaggtgaagctgcagaagc 584 ||||||||||||| |||||||||| Sbjct: 79728 gagtgcaggtgaaactgcagaagc 79751
>emb|AL732450.5| Mouse DNA sequence from clone RP23-190H10 on chromosome X, complete sequence Length = 160831 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tcaaaacatggaagaatttt 200 |||||||||||||||||||| Sbjct: 4386 tcaaaacatggaagaatttt 4405
>emb|AL732368.12| Mouse DNA sequence from clone RP23-417N12 on chromosome X, complete sequence Length = 177727 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 tctagtaaaacaaaacaaac 92 |||||||||||||||||||| Sbjct: 28999 tctagtaaaacaaaacaaac 29018
>emb|AL138780.3| Human DNA sequence from clone RP5-1044P11 on chromosome 1 Contains STSs and GSSs, complete sequence Length = 85175 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 tagatccatcagagaactgaggac 491 |||||||||||||||| ||||||| Sbjct: 58900 tagatccatcagagaattgaggac 58923 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,298,666 Number of Sequences: 3902068 Number of extensions: 7298666 Number of successful extensions: 210671 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 210201 Number of HSP's gapped (non-prelim): 465 length of query: 672 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 649 effective length of database: 17,143,297,704 effective search space: 11126000209896 effective search space used: 11126000209896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)