ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome... 88 1e-14
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 88 1e-14
3dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic D... 88 1e-14
4dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic D... 88 1e-14
5ref|XM_481490.1| Oryza sativa (japonica cultivar-group), mRNA 86 4e-14
6emb|AL513210.32| Human DNA sequence from clone RP11-35J6 on chro... 42 0.57
7gb|AC134542.3| Mus musculus BAC clone RP24-441E15 from 6, comple... 42 0.57
8emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in... 40 2.2
9gb|AC121249.1| Homo sapiens chromosome 3 clone RP11-79K17, compl... 40 2.2
10gb|AC104300.2| Homo sapiens chromosome 3 clone RP11-147N17, comp... 40 2.2
11dbj|AP004496.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 2.2
12ref|XM_465768.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.8
13ref|NM_133255.1| Mus musculus hook homolog 2 (Drosophila) (Hook2... 38 8.8
14gb|BC055881.1| Mus musculus hook homolog 2 (Drosophila), mRNA (c... 38 8.8
15gb|BC019486.1| Mus musculus hook homolog 2 (Drosophila), mRNA (c... 38 8.8
16gb|BC002226.1| Mus musculus hook homolog 2 (Drosophila), mRNA (c... 38 8.8
17gb|AC132242.2| Mus musculus BAC clone RP24-413O2 from chromosome... 38 8.8
18emb|AL032658.1|CEY76A2B Caenorhabditis elegans YAC Y76A2B, compl... 38 8.8
19emb|AL499628.1| Human DNA sequence from clone XX-DJ76P10 on chro... 38 8.8
20gb|AC164076.3| Mus musculus chromosome 1, clone RP24-287C18, com... 38 8.8
21gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 38 8.8
22emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chr... 38 8.8
23emb|AL646101.7| Mouse DNA sequence from clone RP23-145E14 on chr... 38 8.8
24gb|BC036644.1| Homo sapiens cDNA clone IMAGE:4799107 38 8.8
25gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8 38 8.8
26gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 1... 38 8.8
27dbj|AK136069.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 38 8.8
28gb|AC074044.8| Homo sapiens 3q BAC RP11-484K9 (Roswell Park Canc... 38 8.8
29dbj|AK145768.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 38 8.8
30dbj|AK166954.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 38 8.8
31dbj|AK169073.1| Mus musculus 17 days pregnant adult female amnio... 38 8.8
32gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome... 38 8.8
33gb|BC026609.1| Mus musculus hook homolog 2 (Drosophila), mRNA (c... 38 8.8
34dbj|AK042048.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 38 8.8
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
36gb|AC107218.4| Homo sapiens BAC clone RP11-561A13 from 2, comple... 38 8.8
37gb|AC109826.4| Homo sapiens BAC clone RP11-764D5 from 2, complet... 38 8.8
38gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355... 38 8.8
39gb|AC079770.7| Homo sapiens BAC clone RP11-241P9 from 2, complet... 38 8.8
40dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
41gb|AC137755.5| Mus musculus chromosome 1, clone RP24-279G1, comp... 38 8.8
42gb|BC099235.1| Rattus norvegicus hook homolog 2 (Drosophila), mR... 38 8.8
43dbj|AB053222.1| Homo sapiens gene for N-acetylglucosaminyltransf... 38 8.8
44gb|AC005181.1|AC005181 Homo sapiens chromosome 17, clone hRPK.10... 38 8.8
45emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22... 38 8.8
46gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, comple... 38 8.8
47gb|AC140789.2| Gallus gallus BAC clone TAM31-90N23 from chromoso... 38 8.8
48gb|BC080744.1| Mus musculus hook homolog 2 (Drosophila), mRNA (c... 38 8.8
49gb|BC029967.1| Mus musculus hook homolog 2 (Drosophila), mRNA (c... 38 8.8 
>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12,
             complete sequence
          Length = 131944

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                         
Query: 43    ttaatccttgggaagtgtgagatcatctgcagaagctgcccttttgccattataacgctg 102
             ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 26986 ttaatccttgggaagggtgagatcatcagcagaagctaccctttttccattataacgctg 26927



 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 104   ttcccaaaggtgaatggaacatatctgtatttcaccatatgaaggatctgacgcttcatt 163
             ||||| |||| ||||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 26798 ttcccgaaggagaatggaacatatctgtattttatcatatgaagaatctgtcgcttcatt 26739

                           
Query: 164   gtgacagnaaacaa 177
             ||||| | ||||||
Sbjct: 26738 gtgactgtaaacaa 26725
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                            
Query: 43       ttaatccttgggaagtgtgagatcatctgcagaagctgcccttttgccattataacgctg 102
                ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 13021294 ttaatccttgggaagggtgagatcatcagcagaagctaccctttttccattataacgctg 13021353



 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 104      ttcccaaaggtgaatggaacatatctgtatttcaccatatgaaggatctgacgcttcatt 163
                ||||| |||| ||||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 13021482 ttcccgaaggagaatggaacatatctgtattttatcatatgaagaatctgtcgcttcatt 13021541

                              
Query: 164      gtgacagnaaacaa 177
                ||||| | ||||||
Sbjct: 13021542 gtgactgtaaacaa 13021555
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>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone: B1052H09
          Length = 190806

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                          
Query: 43     ttaatccttgggaagtgtgagatcatctgcagaagctgcccttttgccattataacgctg 102
              ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 158274 ttaatccttgggaagggtgagatcatcagcagaagctaccctttttccattataacgctg 158333



 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                          
Query: 104    ttcccaaaggtgaatggaacatatctgtatttcaccatatgaaggatctgacgcttcatt 163
              ||||| |||| ||||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 158462 ttcccgaaggagaatggaacatatctgtattttatcatatgaagaatctgtcgcttcatt 158521

                            
Query: 164    gtgacagnaaacaa 177
              ||||| | ||||||
Sbjct: 158522 gtgactgtaaacaa 158535
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>dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone: B1100F03
          Length = 139217

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                        
Query: 43   ttaatccttgggaagtgtgagatcatctgcagaagctgcccttttgccattataacgctg 102
            ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 1814 ttaatccttgggaagggtgagatcatcagcagaagctaccctttttccattataacgctg 1873



 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                        
Query: 104  ttcccaaaggtgaatggaacatatctgtatttcaccatatgaaggatctgacgcttcatt 163
            ||||| |||| ||||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 2002 ttcccgaaggagaatggaacatatctgtattttatcatatgaagaatctgtcgcttcatt 2061

                          
Query: 164  gtgacagnaaacaa 177
            ||||| | ||||||
Sbjct: 2062 gtgactgtaaacaa 2075
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>ref|XM_481490.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 864

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                       
Query: 104 ttcccaaaggtgaatggaacatatctgtatttcaccatatgaaggatctgacgcttcatt 163
           ||||| |||| ||||||||||||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 833 ttcccgaaggagaatggaacatatctgtattttatcatatgaagaatctgtcgcttcatt 774

                         
Query: 164 gtgacagnaaacaa 177
           ||||| | ||||||
Sbjct: 773 gtgactgtaaacaa 760
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>emb|AL513210.32| Human DNA sequence from clone RP11-35J6 on chromosome 6 Contains six CpG
              islands, complete sequence
          Length = 157572

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 69     ctgcagaagctgcccttttgc 89
              |||||||||||||||||||||
Sbjct: 111721 ctgcagaagctgcccttttgc 111741
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>gb|AC134542.3| Mus musculus BAC clone RP24-441E15 from 6, complete sequence
          Length = 175750

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     taataaaagcatttcaccatt 26
             |||||||||||||||||||||
Sbjct: 93397 taataaaagcatttcaccatt 93417
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>emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in linkage group 14,
              complete sequence
          Length = 159057

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     ttataacgctgtttcccaaa 111
              ||||||||||||||||||||
Sbjct: 122805 ttataacgctgtttcccaaa 122786
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>gb|AC121249.1| Homo sapiens chromosome 3 clone RP11-79K17, complete sequence
          Length = 128583

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  cccaaaggtgaatggaacat 125
            ||||||||||||||||||||
Sbjct: 1343 cccaaaggtgaatggaacat 1362
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>gb|AC104300.2| Homo sapiens chromosome 3 clone RP11-147N17, complete sequence
          Length = 156024

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   cccaaaggtgaatggaacat 125
             ||||||||||||||||||||
Sbjct: 20775 cccaaaggtgaatggaacat 20756
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>dbj|AP004496.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11C13, TM0029a,
             complete sequence
          Length = 53909

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    tcaaattcccatatatttaa 46
             ||||||||||||||||||||
Sbjct: 16485 tcaaattcccatatatttaa 16466
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>ref|XM_465768.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 816

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 73  agaagctgcccttttgccattat 95
           ||||||||||| |||||||||||
Sbjct: 395 agaagctgcccgtttgccattat 417
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>ref|NM_133255.1| Mus musculus hook homolog 2 (Drosophila) (Hook2), mRNA
          Length = 2521

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1716 gatcatctgcagaagctgc 1734
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>gb|BC055881.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone MGC:68106
            IMAGE:3590336), complete cds
          Length = 2477

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1686 gatcatctgcagaagctgc 1704
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>gb|BC019486.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone MGC:28586
            IMAGE:4211990), complete cds
          Length = 2521

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1716 gatcatctgcagaagctgc 1734
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>gb|BC002226.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone
           IMAGE:3491260), partial cds
          Length = 1826

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  gatcatctgcagaagctgc 81
           |||||||||||||||||||
Sbjct: 949 gatcatctgcagaagctgc 967
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>gb|AC132242.2| Mus musculus BAC clone RP24-413O2 from chromosome 18, complete
            sequence
          Length = 177442

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 64   atcatctgcagaagctgcc 82
            |||||||||||||||||||
Sbjct: 7908 atcatctgcagaagctgcc 7926
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>emb|AL032658.1|CEY76A2B Caenorhabditis elegans YAC Y76A2B, complete sequence
          Length = 35870

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    ttcaaattcccatatattt 44
             |||||||||||||||||||
Sbjct: 25600 ttcaaattcccatatattt 25618
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>emb|AL499628.1| Human DNA sequence from clone XX-DJ76P10 on chromosome 16 Contains
             STSs, GSSs and a CpG island, complete sequence
          Length = 43457

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    gcatttcaccatttcaaat 32
             |||||||||||||||||||
Sbjct: 24555 gcatttcaccatttcaaat 24573
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>gb|AC164076.3| Mus musculus chromosome 1, clone RP24-287C18, complete sequence
          Length = 185185

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     ataactaataaaagcattt 19
             |||||||||||||||||||
Sbjct: 94934 ataactaataaaagcattt 94916
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     ctgcccttttgccattata 96
              |||||||||||||||||||
Sbjct: 336500 ctgcccttttgccattata 336482
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>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5'
              end of the gene for a novel protein (9330163N21Rik), a
              ribosomal protein S2 (Rps2) pseudogene, the gene for a
              novel protein (E130018012Rik), the gene for a novel protein
              (6820428D13Rik), the Mrpl27 gene for mitochondrial
              ribosomal protein L27, the Xylt2 gene for
              xylosyltransferase II, a novel gene (5330426M11Rik), the
              gene for a novel protein (C230057C09Rik), the gene for a
              novel protein similar to Cdc34 and two pseudogenes similar
              to hypothetical protein Tr:Q8C517, complete sequence
          Length = 203262

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     caccatttcaaattcccat 38
              |||||||||||||||||||
Sbjct: 148944 caccatttcaaattcccat 148962
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>emb|AL646101.7| Mouse DNA sequence from clone RP23-145E14 on chromosome 11, complete
             sequence
          Length = 169742

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 117   atggaacatatctgtattt 135
             |||||||||||||||||||
Sbjct: 65648 atggaacatatctgtattt 65630
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>gb|BC036644.1| Homo sapiens cDNA clone IMAGE:4799107
          Length = 829

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 14  gcatttcaccatttcaaat 32
           |||||||||||||||||||
Sbjct: 440 gcatttcaccatttcaaat 458
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>gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8
          Length = 270150

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     gcatttcaccatttcaaat 32
              |||||||||||||||||||
Sbjct: 265676 gcatttcaccatttcaaat 265694
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>gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 15q21.3, complete
              sequence
          Length = 209779

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     ttgggaagtgtgagatcat 68
              |||||||||||||||||||
Sbjct: 165510 ttgggaagtgtgagatcat 165492
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>dbj|AK136069.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420452M08 product:hook homolog 2
            (Drosophila), full insert sequence
          Length = 2522

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1662 gatcatctgcagaagctgc 1680
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>gb|AC074044.8| Homo sapiens 3q BAC RP11-484K9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194006

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 9      taaaagcatttcaccatttcaaa 31
              ||||||||||||| |||||||||
Sbjct: 190285 taaaagcatttcagcatttcaaa 190263
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>dbj|AK145768.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
            library, clone:I1C0040G18 product:hook homolog 2
            (Drosophila), full insert sequence
          Length = 2569

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1708 gatcatctgcagaagctgc 1726
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>dbj|AK166954.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
            library, clone:I1C0025F04 product:hook homolog 2
            (Drosophila), full insert sequence
          Length = 2578

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1720 gatcatctgcagaagctgc 1738
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>dbj|AK169073.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN
            full-length enriched library, clone:I920078M12
            product:hook homolog 2 (Drosophila), full insert sequence
          Length = 2569

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1708 gatcatctgcagaagctgc 1726
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>gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome 13, complete sequence
          Length = 174845

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 68     tctgcagaagctgcccttt 86
              |||||||||||||||||||
Sbjct: 109609 tctgcagaagctgcccttt 109591
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>gb|BC026609.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone
           IMAGE:4976545), partial cds
          Length = 1698

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  gatcatctgcagaagctgc 81
           |||||||||||||||||||
Sbjct: 900 gatcatctgcagaagctgc 918
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>dbj|AK042048.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630054I03 product:HOOK2 PROTEIN homolog
            [Homo sapiens], full insert sequence
          Length = 2477

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1728 gatcatctgcagaagctgc 1746
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 73       agaagctgcccttttgccattat 95
                ||||||||||| |||||||||||
Sbjct: 17291172 agaagctgcccgtttgccattat 17291150
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>gb|AC107218.4| Homo sapiens BAC clone RP11-561A13 from 2, complete sequence
          Length = 164620

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    accatttcaaattcccata 39
             |||||||||||||||||||
Sbjct: 44029 accatttcaaattcccata 44047
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>gb|AC109826.4| Homo sapiens BAC clone RP11-764D5 from 2, complete sequence
          Length = 87746

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 105   tcccaaaggtgaatggaac 123
             |||||||||||||||||||
Sbjct: 22522 tcccaaaggtgaatggaac 22540
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>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete
             sequence
          Length = 173386

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    ttgggaagtgtgagatcat 68
             |||||||||||||||||||
Sbjct: 15741 ttgggaagtgtgagatcat 15723
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>gb|AC079770.7| Homo sapiens BAC clone RP11-241P9 from 2, complete sequence
          Length = 81344

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 16   atttcaccatttcaaattc 34
            |||||||||||||||||||
Sbjct: 7633 atttcaccatttcaaattc 7651
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>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0579G08
          Length = 164452

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 73    agaagctgcccttttgccattat 95
             ||||||||||| |||||||||||
Sbjct: 63855 agaagctgcccgtttgccattat 63833
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>gb|AC137755.5| Mus musculus chromosome 1, clone RP24-279G1, complete sequence
          Length = 153471

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      ataactaataaaagcattt 19
              |||||||||||||||||||
Sbjct: 136889 ataactaataaaagcattt 136907
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>gb|BC099235.1| Rattus norvegicus hook homolog 2 (Drosophila), mRNA (cDNA clone
            IMAGE:7444932), partial cds
          Length = 2067

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1257 gatcatctgcagaagctgc 1275
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>dbj|AB053222.1| Homo sapiens gene for N-acetylglucosaminyltransferase IVa, partial
            cds
          Length = 12562

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 105  tcccaaaggtgaatggaac 123
            |||||||||||||||||||
Sbjct: 7099 tcccaaaggtgaatggaac 7081
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>gb|AC005181.1|AC005181 Homo sapiens chromosome 17, clone hRPK.1003_J_3, complete sequence
          Length = 202763

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     atttaatccttgggaagtg 59
              |||||||||||||||||||
Sbjct: 143977 atttaatccttgggaagtg 143959
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>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3,
             complete sequence
          Length = 134390

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    agcatttcaccatttcaaa 31
             |||||||||||||||||||
Sbjct: 97783 agcatttcaccatttcaaa 97801
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>gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, complete sequence
          Length = 201839

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   ggtgaatggaacatatctg 130
             |||||||||||||||||||
Sbjct: 35780 ggtgaatggaacatatctg 35798
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>gb|AC140789.2| Gallus gallus BAC clone TAM31-90N23 from chromosome ul, complete
             sequence
          Length = 92928

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 83    cttttgccattataacgctgttt 105
             |||||||||||||||| ||||||
Sbjct: 64043 cttttgccattataaccctgttt 64065
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>gb|BC080744.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone MGC:91008
            IMAGE:30471369), complete cds
          Length = 2606

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1730 gatcatctgcagaagctgc 1748
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>gb|BC029967.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone
            IMAGE:4242056)
          Length = 2557

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   gatcatctgcagaagctgc 81
            |||||||||||||||||||
Sbjct: 1681 gatcatctgcagaagctgc 1699


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,065,797
Number of Sequences: 3902068
Number of extensions: 2065797
Number of successful extensions: 142764
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142565
Number of HSP's gapped (non-prelim): 199
length of query: 180
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 158
effective length of database: 17,147,199,772
effective search space: 2709257563976
effective search space used: 2709257563976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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