| Clone Name | rbags1f22 |
|---|---|
| Clone Library Name | barley_pub |
>KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-associated| protein 5.10) (Ultrahigh sulfur keratin-associated protein 5.10) Length = 202 Score = 33.1 bits (74), Expect = 0.73 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -3 Query: 98 CNSCQPCNCQPWCAHCCFVTC 36 CN C+PC C C CC +C Sbjct: 142 CNCCKPCCCSSGCGSCCQSSC 162
>ODPA_KLULA (O13366) Pyruvate dehydrogenase E1 component alpha subunit,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) Length = 412 Score = 32.0 bits (71), Expect = 1.6 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = +1 Query: 292 LLGNSTSVRTIHLYSRNF*KDE*AAIQTYGDGNPGDEILVQAVVVSTGNEGCPQHVCDLK 471 ++G S+S+R + RNF K+ A Q + PGD+ LVQ + T EG V +L Sbjct: 10 VVGKSSSLRLV----RNFSKNVRALSQVADETKPGDDDLVQIDLPETSFEGYLLDVPELS 65 Query: 472 Y 474 Y Sbjct: 66 Y 66
>CABL1_HUMAN (Q8TDN4) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)| (Ik3-1) Length = 633 Score = 30.8 bits (68), Expect = 3.6 Identities = 25/95 (26%), Positives = 44/95 (46%) Frame = +3 Query: 111 NGLAFTKKKKNDQKFASPSAVIQVPKGSFLGEPLDANGSGHPRQANFFCARGRSSLPPVS 290 +G A ++ + D F S +QVP +FLG +GSG + N F + P++ Sbjct: 200 SGAAGQEELEEDDAFIS----VQVPAAAFLGSGTPGSGSGSRGRLNSF----TQGILPIA 251 Query: 291 FTWQFYIRKNYSSIQPEFLEGRVSSNTDIRRWQPR 395 F+ +NY S++ G S+ ++R + R Sbjct: 252 FSRP--TSQNYCSLEQPGQGGSTSAFEQLQRSRRR 284
>KR171_HUMAN (Q9BYP8) Keratin-associated protein 17-1 (Keratin associated| protein 16.1) Length = 105 Score = 30.8 bits (68), Expect = 3.6 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -3 Query: 95 NSCQPCNCQPWCAHCCFVTC 36 N C+ C CQP C CC C Sbjct: 17 NCCEECCCQPGCCGCCGSCC 36
>IGHA1_HUMAN (P01876) Ig alpha-1 chain C region| Length = 353 Score = 30.4 bits (67), Expect = 4.7 Identities = 24/80 (30%), Positives = 33/80 (41%) Frame = -3 Query: 608 FPRSTFGSGLVYQTGSPNGFCLSFRATRCLTSC*RHQSIFCCHTEYLRSQTC*GQPSFPV 429 FP S SG +Y T S L+ AT+CL CH ++ + + PV Sbjct: 53 FPPSQDASGDLYTTSSQ----LTLPATQCLAG-----KSVTCHVKHYTNPSQDVTVPCPV 103 Query: 428 ETTTACTRISSPGLPSPYVC 369 +T S+P PSP C Sbjct: 104 PSTPPTPSPSTPPTPSPSCC 123
>NU2M_APILI (P34849) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 333 Score = 30.0 bits (66), Expect = 6.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = -2 Query: 555 WLLSFIPGYPMLNFMLTTSIYLLLSYRVFEITNVLRAAFIPSRDNNRLYQNFIA 394 W+L + M++ ML Y+++ RVF N + FI +DN +Y ++ A Sbjct: 267 WILFLL----MISSMLMIWNYIIILKRVFLKMNFYKNNFIDDKDNKYMYHSYFA 316 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,165,193 Number of Sequences: 219361 Number of extensions: 2209438 Number of successful extensions: 5762 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5321 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5746 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)