ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CD68_HUMAN (P34810) Macrosialin precursor (GP110) (CD68 antigen) 32 2.6

>CD68_HUMAN (P34810) Macrosialin precursor (GP110) (CD68 antigen)|
          Length = 354

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 32/123 (26%), Positives = 42/123 (34%), Gaps = 6/123 (4%)
 Frame = +1

Query: 130 FIITITVTDNI------TLKSIKASLHRERERETVGPGPNHGNDIGEDEHLDEWVTQDNK 291
           F +T TVT++       T KS K + HR     T   GP                     
Sbjct: 36  FTVTPTVTESTGTTSHRTTKSHKTTTHRTTTTGTTSHGPTTATH------------NPTT 83

Query: 292 NMPGSIGVIELHSSVLVSPKPSLESHHRVTNGRR*CQVPKTNISTPEPVSDEGHRLSLEP 471
              G++ V    +S   S  PS  +H   T       V  T+ ST    +  G   S  P
Sbjct: 84  TSHGNVTVHPTSNSTATSQGPSTATHSPATTSHGNATVHPTSNST---ATSPGFTSSAHP 140

Query: 472 EPP 480
           EPP
Sbjct: 141 EPP 143


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,490,968
Number of Sequences: 219361
Number of extensions: 1947745
Number of successful extensions: 4089
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4089
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7422931207
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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